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International Journal of Electronics and Communication Engineering Research and Development
(IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014)
73
DETECTION OF HUMAN BLADDER CANCER CELLS USING IMAGE
PROCESSING
TARESH B M1
, P C SRIKANTH2
, SHRAVAN S K3
1
Department of ECE, Malnad College of Engineering, Hassan, India
2
Professor & Head, Department of ECE, Malnad College of Engineering, Hassan, India
3
Department of ECE, Malnad College of Engineering, Hassan, India
ABSTRACT
Bladder cancer presents a spectrum of different diatheses. A precise assessment for
individualized treatment depends on the accuracy of the initial diagnosis. In this method the
performance of the level set segmentation is subject to appropriate initialization and optimal
configuration of controlling parameters, which require substantial manual intervention. A
new fuzzy level set algorithm is proposed in this paper to facilitate medical image
segmentation. It is able to directly evolve from the initial segmentation by spatial fuzzy
clustering. The Spatial induced fuzzy c-means using pixel classification and level set
methods are utilizing dynamic variational boundaries for image segmentation. The
controlling parameters of level set evolution are also estimated from the results of clustering.
The fuzzy level set algorithm is enhanced with locally regularized evolution. Such
improvements facilitate level set manipulation and lead to more robust segmentation.
Performance evaluation of the proposed algorithm was carried on medical images from
different modalities.
Index Term: Magnetic Resonance Imaging (MRI), K-means, fuzzy c-means, spatial fuzzy
clustering with level set method.
1. INTRODUCTION
Bladder cancer starts in the cells of the bladder. The bladder, a part of the urinary
system, is in the lower part of the abdomen. It is a hollow, balloon-shaped organ with a
flexible, muscular wall. Urine is processed by the kidneys. It is then passed to the bladder
through 2 tubes called ureters. When the bladder is full, the muscles in the bladder wall
tighten to force the urine out of the bladder. The urine empties out of the bladder and passes
out of the body through a tube called the urethra.
IJECERD
© PRJ
PUBLICATION
International Journal of Electronics and Communication
Engineering Research and Development
(IJECERD)
ISSN 2248– 9525 (Print)
ISSN 2248 –9533 (Online)
Volume 4, Number 2, April- June (2014), pp. 73-82
© PRJ Publication, http://www.prjpublication.com/IJECERD.asp
International Journal of Electronics and Communication Engineering Research and Development
(IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014)
74
2. EXISTING METHOD (K-MEANS AND FUZZY C MEANS METHODS)
Morphological processing is constructed with operations on sets of pixels. Binary
morphology uses only set membership and is indifferent to the value, such as gray level or
color, of a pixel. Morphological image processing relies on the ordering of pixels in an image
and many times is applied to binary and gray scale images. Through processes such as
erosion, dilation, opening and closing, binary images can be modified to the user's
specifications. Binary images are images whose pixels have only two possible intensity
values. They are normally displayed as black and white. Numerically, the two values are
often 0 for black, and either 1 or 255 for white. The rest (usually black) is referred to as the
background color. However, depending on the image which is to be threshold, this polarity
might be inverted, and in which case the object is displayed with 0 and the background is
with a non-zero value. Some morphological operators assume a certain polarity of the binary
input image so that if we process an image with inverse polarity the operator will have the
opposite effect. For example, if we apply a closing operator to a black text on white
background, the text will be opened.
Steps for k-means:
1. Give the no of cluster value as k.
2. Randomly choose the k cluster centers
3. Calculate mean or center of the cluster
4. Calculate the distance b/w each pixel to each cluster center
5. If the distance is near to the center then move to that cluster.
6. Otherwise move to next cluster.
7. Re-estimate the center.
8. Repeat the process until the center doesn't move
Steps for Fuzzy C-means:
I. Initialize U=[uij] matrix, U(0)
II. At k-step: calculate the centers vectors C(k)=[cj] with U(k)
a. ‫ܥ‬௝ ൌ
∑ ௨೔ೕ
೘ಿ
೔సభ .௫೔
∑ ௨೔ೕ
೘ಿ
೔సభ
III. ‫ܷ݁ݐܽ݀݌ݑ‬ሺ௞ሻ
, ܷሺ௞ାଵሻ
a. ‫ݑ‬௩ ൌ
ଵ
∑ ቆ
ቛೣ೔ష೎ೕቛ
ฮೣ೔ష೎ೖฮ
ቇ
మ
೘షభ
೎
ೖసభ
IV. If || U (k+1) – U (k)||< ε then STOP; otherwise return to step II.
International Journal of Electronics and Communication Engineering Research and Development
(IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014)
75
4. PROPOSED ALGORITHM
4.1 Spatial fuzzy clustering and image segmentation
In fuzzy clustering, the centroid and the scope of each subclass are estimated
adaptively in order to minimize a pre-defined cost function. It is thereby appropriate to take
fuzzy clustering as a kind of adaptive thresholding. Fuzzy c-means (FCM) is one of most
popular algorithms in fuzzy clustering, and has been widely applied to medical field.
The classical FCM algorithm originates from the k-means algorithm. In brief, the k-means
algorithm seeks to assign N objects, based on their attributes, into K clusters (K൒N). For
medical image segmentation, N equals the number of image pixels NxXNy. The desired
results include the centroid of each cluster and the affiliations of N objects. Standard k-means
clustering attempts to minimize the cost function
‫ܬ‬ ൌ ෍ ෍ሺԡ݅௡ െ ‫ݒ‬௠ԡሻ ଶ
ே
௡ୀଵ
௞
௠ୀଵ
where in is the specific image pixel, ‫ݒ‬௠ the centroid of the ݉௧௛
cluster, and ԡ. ԡ denotes the
norm. The ideal results of a k-means algorithm maximize the inter-cluster variations, but
minimize the intra- cluster ones.
In k-means clustering, every object is limited to one and only one of K clusters. In
contrast, an FCM utilizes a membership function ݉௠௡to indicate the degree of membership
of the nth object to the ݉௧௛
cluster, which is justifiable for medical image segmentation as
physiological tissues are usually not homogeneous. The cost function in an FCM is similar
‫ܬ‬ ൌ ෍ ෍ µ௠௡
௅ ሺԡ݅௡ െ ‫ݒ‬௠ԡሻ ଶ
஼
௠ୀଵ
ே
௡ୀଵ
is a parameter controlling the fuzziness of the resultant segmentation. The membership
functions are subject to the following constraints:
෍ µ௠௡
஼
௠ୀଵ
ൌ 1; 0 ൑ µ௠௡
൑ 1; ෍ µ୫୬
ே
௡ୀଵ
൐ 0.
The membership functions ߤ௠௡ and the centroids vm are updated iteratively
µ௠௡
ൌ
ԡ݅௡ െ ‫ݒ‬௠ԡ
ିଶ
ሺ௟ିଵሻൗ
∑ ሺԡ݅௡ െ ‫ݒ‬௞ԡሻିଶሺ೗షభሻ௖
௞ୀଵ
ܸ௜ ൌ
∑ µ௠௡
௟ே
௡ୀଵ ݅௡
∑ µ௠௡
௟ே
௡ୀଵ
The standard FCM algorithm is optimized when pixels close to their centroid are
assigned high membership values, while those that are far away are assigned low values. One
of the problems of standard FCM algorithms in an image segmentation is the lack of spatial
International Journal of Electronics and Communication Engineering Research and Development
(IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014)
76
information. Since image noise and artifacts often impair the performance of an FCM
segmentation, it would be attractive to incorporate spatial information into an FCM. Cai etal.
proposed a generalized FCM algorithm that adopts a similarity factor to incorporate local
intensity and spatial information. In contrast to the above preparatory weighting, it is also
possible to utilize morphological operations to apply spatial restrictions at the post-processing
stage. Chuang et al. proposed another spatial FCM algorithm in which spatial information
can be incorporated into fuzzy member- ship functions directly using
µ௠௡
′
ൌ
µ௠௡
௣
݄௠௡
௤
∑ ൫µ௞௡
௣
݄௞௡
௤
൯௖
௞ୀଵ
where p and q are two parameters controlling the respective contribution. The variable hmn
includes spatial information by
݄௠௡ ൌ ෍ µ௡௞
௞ୀேబ
where Nn denotes a local window centered around the image pixel n. The weighted mmn and
the centroid vm are update.
2.1. Cluster Validity Functions
One of the fundamental challenges of clustering is how to evaluate results, without
auxiliary information. A common approach for evaluation of clustering results is to use
validity indexes. Clustering validation is a technique to find a set of clusters that best fits
natural partitions (number of clusters) without any class information.
Generally speaking, there are two types of clustering techniques, which are based on external
criteria and internal criteria.
• External validation: Based on previous knowledge about data.
• Internal validation: Based on the information intrinsic to the data alone.
Considering these two types of cluster validation to determine the correct number of
groups from a dataset, one option is to use external validation indexes for which a priori
knowledge of dataset information is required, but it is hard to say if they can be used in real
problems. Another option is to use internal validity indexes which do not require a priori
information from dataset.
The fuzzy clustering based on image intensity is done by initial segmentation which
employs level set methods for object refinement by tracking boundary variation. The widely
used conventional fuzzy c-means for medical image segmentations has limitations because of
its squared-norm distance measure to measure the similarity between centers and data objects
of medical images which are corrupted by heavy noise, outliers, and other imaging artifacts.
To overcome the limitations the proposed technique Kernel Induced Possibilistic Fuzzy C –
Means (KFCM) with Level Set Segmentation has been introduced. Compared to previous
method FCM, the proposed KFCM algorithm has significantly improved in the following
aspects. First, the KFCM incorporates spatial information during an adaptive optimization,
which eliminates the intermediate morphological operations. Second, the controlling
parameters of level set segmentation are now derived from the results of fuzzy clustering
directly. Finally the proposed algorithm is more robust to noise and outliers, and still retains
computational simplicity.
International Journal of Electronics and Communication Engineering Research and Development
(IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014)
77
3.1. Fuzzy Objective
The fuzzy c-means assigns pixels to c partitions by using fuzzy memberships. Let X =
{x1, x2, x3… xn} denote an image with n pixels to be partioned into c clusters, where xi (i =
1, 2, 3 ... n) is the pixel intensity. The objective function is to discover nonlinear relationships
among data, kernel methods use embedding mappings that map features of the data to new
feature spaces. The proposed technique Kernel Induced Possibilistic Fuzzy C-Means
(KFCM) is an iterative clustering technique that minimizes the objective function.
Given an image dataset, X = {x1…xn}⊂Rp, the original KFCM algorithm partitions X into c
fuzzy subsets by minimizing the following objective function as,
‫ܬ‬ሺ‫,ݓ‬ ‫,ݑ‬ ‫ݒ‬ሻ ൌ ෍ ෍ u௜௞
௠
ሺԡ‫ݔ‬௞ െ ‫ݒ‬௜ԡሻ ଶ
௡
௞ୀଵ
௖
௜ୀଵ
where c is the number of clusters and selected as a specified value;nis the number of data
points, uik the membership of xk in class i, satisfying the
෍ ‫ݑ‬௜௞
஼
௜ୀଵ
ൌ 1
m the quantity controlling clustering fuzziness, and V the set of cluster centers or prototypes
(vi∈Rp).
3.2. Kernel Induced Possibilistic Fuzzy C-Means
In fuzzy clustering, the centroid and the scope of each subclass are estimated
adaptively in order to minimize a pre-defined cost function. It is one of the most popular
algorithms in fuzzy, and has been applied in medical problems. The fuzzy utilizes a
membership function to indicate the degree of membership of the nth object to the mth cluster
which is justifiable for medical image segmentation, as physiological tissues are usually not
homogeneous.
The fuzzy utilizes a membership function to indicate the degree of membership in
finding the allocate space and allocate resources which is justifiable for medical image
segmentation.
Kernel Induced Possibilistic Fuzzy C Means (KFCM) clustering algorithm is
incorporates the spatial neighborhood information with traditional FCM and updating the
objective function of each cluster. The KFCM uses the probabilistic constraint that the
memberships of a data point across classes are sum to one. The kernel induced possibilistic c-
means algorithm is used to minimize the objective function using Gaussian kernel function.
The Gaussian function ηiare estimated using,
ߟ௜ ൌ ‫ܭ‬
∑ ‫ݑ‬௜௞
௠
2ሺ1 െ ‫ܭ‬ሺ‫ݔ‬௞, ‫ݒ‬௜ሻሻ௡
௡ୀଵ
∑ ‫ݑ‬௜௞
௠௡
௞ୀଵ
The fuzzy membership function uik is that the edges connecting the inner data points
in a cluster may have a larger degree of belonging to a cluster than the peripheral‖ edges
(which, in a sense, reflects a greater strength of connectivity between a pair of data points).
For instance, the edges (indexed i) connecting the inner point in a cluster (indexed k) are
assigned uik = 1 whereas the edges linking the boundary points in a cluster have uik< 1.
International Journal of Electronics and Communication Engineering Research and Development
(IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014)
78
Each cluster is represented by a data point called a cluster center, and the method
searches for clusters so as to maximize a fitness function called net similarity. The method is
iterative and stops after maximum iterations (default of 500). It automatically determines the
number of clusters, based on the input p, which is an Nx1 matrix of real numbers called
preferences. A good choice is to set all preference values to the median of the similarity
values. The number of identified clusters can be increased or decreased by changing this
value accordingly.
The objective function in the clustering problem becomes more general so that the
weights of data points are being taken into account, as follows:
ܵሺܿሻ ൌ ෍ሺ෍ ‫ݑ‬௜ሺ௝ሻ௞
௠
,݇ ൅ ෍ ‫ݕ‬௝௞ሺ‫ܥ‬௞ሻ
௡
௝ୀଵ
|஼ೖ|
௜ୀଵ
ሻ
௞
௞ୀଵ
where C denotes the decomposition of the given clusters, C1, …, CK are not-
necessarily disjoint clusters in the decomposition C, γ denotes the modulating argument, S(C)
denotes the total strength of connectivity cluster, designates, as in the edge connectivity of
cluster, the weight ui(j)k,k is the membership degree of i(j) containing data point j in cluster
k, and finally, it is the fitness of cluster j to cluster k.
3.3. Level Set Segmentation
The fuzzy using pixel classification with level set methods utilizes dynamic
variational boundaries for image segmentation. Segmenting images by means of active
contours is well known approach instead of parametric characterization of active contours.
Level set methods embed them into a time dependent PDE function. It is possible to
approximate the evolution of active contours implicitly by tracking the zero level set.
The level set evolution of active contour implicitly tracking the zero level
setΓ(t), ቐ
Φሺt, x, yሻ ൏ 0 ሺx, yሻis insde Γሺtሻ
Φሺt, x, yሻ ൌ 0 ሺx, yሻis at Γሺtሻ
Φሺt, x, yሻ ൐ 0 ሺx, yሻis outside Γሺtሻ
3.4. Fuzzy With Level Set Algorithm
Both fuzzy algorithms and level set methods are general-purposed computational
model that can be applied to problems of any dimensions. A new fuzzy level set algorithm is
proposed for automated medical image segmentation. The algorithm automates the
initialization and parameter configuration of the level set segmentation, using Kernel Fuzzy
clustering.
A new fuzzy level set algorithm automates the initialization and parameter
configuration of the level set segmentation, using spatial kernel fuzzy clustering. It employs a
KFCM with spatial constraints to determine the approximate contours of interest in a medical
image. Benefitting from the flexible initializations, the enhanced level set function can
accommodate KFCM results directly for evolution. The enhancement achieves several
practical benefits. The objective function now is derived from spatial fuzzy clustering
directly. The level set function will automatically slow down the evolution and will become
totally dependent on the smoothing term.
International Journal of Electronics and Communication Engineering Research and Development
(IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014)
79
4. IMPLEMENTATION
Step 1: In fuzzy clustering process, the input MRI image and number of clusters areto be
initialized. In this process, fuzzy objective function, membership function and weights are
calculated. To separate the partition matrix with help of cluster centroid value, the distance
matrix is used to find the similarity index value of black and white pixels of the image. In the
last iteration, the final partitioned objective function is derived.
Step 2: Contour plot is defined to separate the background and foreground region in the
image. The regions of object in binary images are found using initial contour and perimeter
functions
Step 3: 2-D convolution process, Gaussian filter function creates an image smoothness value
which returns the central part of the image convolution.
Step 4: The image pixel directions are estimated with the help of gradient function which can
either be scalars to specify the spacing between points in each direction or vectors to specify
the coordinates of the values along corresponding dimensions. The variation in space of any
quantity can be represented (e.g. graphically) by a slope. The gradient represents the
steepness and direction of that slope.
Step 5: The Neumann boundary or second-type boundary condition is a type of boundary
condition, named after Carl Neumann. When imposed on an ordinary or a partial differential
equation, it specifies the values that the derivative of a solution is to take on the boundary of
the domain.
Step 6: In Level set evolution there arethree types of processes that are integratedin the final
segmentation. (i) The Neumann boundary condition specifies the normal derivative of the
function on a surface. (ii) The Direct Adaptive Controller method is used by a controller
which must adapt to a controlled system with parameters which vary, or are initially
uncertain. (iii) The curvature central method is used to separate the gradient coordinate’s
directions and sum of these points is used to find out the position which evaluates the final
segmentation.
5. RESULTS
The result of experiments and performance evolution were carried on medical images
from different modalities, including an ultrasound image, bladder tumors and MRI slice of
cancer cells. Both the algorithms of spatial Kernel Fuzzy induced Clustering and fuzzy level
set method were implemented in matlab R2008b. The experiments were designed to evaluate
the usefulness of initial fuzzy clustering for level set segmentation. It adopted the fast level
set algorithm as in the curve optimization, where the initialization was by manual
demarcation, intensity thersholding and Spatial KFCM. Due to weak boundaries and strong
background noise, manual initialization did not lead to an optimal level set segmentation. The
intensity thersholding and fuzzy clustering attracted the dynamic curve quickly to the
boundaries of interest.
International Journal of Electronics and Communication Engineering Research and Development
(IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014)
80
FIG 1: K-MEANS AND FUZZY C-MEANS CLUSTERING FOR MRI
OUTPUT OUTPUT
INPUT
DENOISE
SEGEMENTATION
K-MEANS CLUSTERING FUZZY C MEANS
International Journal of Electronics and Communication Engineering Research and Development
(IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014)
81
FIG 2: SPATIAL FUZZY CLUSTERING WITH LEVEL SET FOR MRI
CONCLUSION
In this paper we have worked with a spatial kernel induced Fuzzy level set algorithm
that has been proposed for automated MRI image segmentation. The enhanced FCM
algorithms with spatial information can approximate the boundaries of interest well. The
level set evolution will start from a region close to the genuine boundaries. The algorithm
estimates the controlling parameters from spatial clustering automatically. This has reduced
the manual intervention. Finally the fuzzy level set evolution is modified locally by means of
spatial fuzzy clustering. All these improvements lead to a robust algorithm for medical image
segmentation.
INPUT
KERNEL INDUCED
POSSIBILISTIC FUZZY C-
MEANS
FUZZY OBJECTIVE
LEVEL SET
SEGMENTATION
OUTPUT
International Journal of Electronics and Communication Engineering Research and Development
(IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014)
82
REFERENCES
[1] Chun-Ping Jen, Ching-Te Huang, "Diagnosis of Human Bladder Cancer Cells at
Different Stages Using Multispectral Imaging Microscopy" IEEE JOURNAL OF
SELECTED TOPICS IN QUANTUM ELECTRONICS, VOL. 20, NO. 3,
[2] Ismail Ben Ayed,Polarimetric "Image Segmentation via Maximum-Likelihood
Approximation and Efficient Multiphase Level-Sets" IEEE TRANSACTIONS ON
PATTERN ANALYSIS AND MACHINE INTELLIGENCE, VOL. 28, NO. 9,
SEPTEMBER 2006
[3] Christos Sakellarios1, Spiros Kostopoulos2, "Segmentation and Classification of
Histopathology Images for Abetting Diagnosis in Urinary Bladder Cancer" 4th
International Conference on Experiments/Process/System
Modeling/Simulation/Optimization 4th IC-EpsMsO Athens, 6-9 July, 2011
[4] Wenhui Li, Jinlong Zhu inJournal" A Medical Image Segmentation Based on
Improved Fuzzy Clustering and Level Set" of Information & Computational
Science 10:17 (2013) 5599–5606
[5] Ms. M. Parisa Beham Assistant Professor, Department of ECE Vickram College of
Engineering Madurai, TamilNadu, India "MORPHOLOGICAL IMAGE
PROCESSING APPROACH ON THE DETECTION OF TUMOR AND
CANCER CELLS"
[6] Feng SHI†1, Jie YANG1, " Automatic segmentation of bladder in CT images*"
Journal of Zhejiang University SCIENCE A
[7] Manali Patil Samata Prabhu "Brain Tumor Identification Using K-Means
Clustering" International Journal of Engineering Trends and Technology-
Volume4Issue3- 2013
[8] Wenhui Li, Jinlong Zhu "A Medical Image Segmentation Based on Improved
Fuzzy Clustering and Level Set" in Journal of Information & Computational
Science, china
[9] Pascal Martin, Philippe Re´ fre´ gier," Influence of the Noise Model on Level Set
Active Contour Segmentation" in IEEE TRANSACTIONS ON PATTERN
ANALYSIS AND MACHINE INTELLIGENCE, VOL. 26, NO. 6, JUNE 2004
[10] Dzung L. Pham "Adaptive Fuzzy Segmentation of Magnetic Resonance Images",
in IEEE TRANSACTIONS ON MEDICAL IMAGING, VOL. 18, NO. 9,
SEPTEMBER 1999

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DETECTION OF HUMAN BLADDER CANCER CELLS USING IMAGE PROCESSING

  • 1. International Journal of Electronics and Communication Engineering Research and Development (IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014) 73 DETECTION OF HUMAN BLADDER CANCER CELLS USING IMAGE PROCESSING TARESH B M1 , P C SRIKANTH2 , SHRAVAN S K3 1 Department of ECE, Malnad College of Engineering, Hassan, India 2 Professor & Head, Department of ECE, Malnad College of Engineering, Hassan, India 3 Department of ECE, Malnad College of Engineering, Hassan, India ABSTRACT Bladder cancer presents a spectrum of different diatheses. A precise assessment for individualized treatment depends on the accuracy of the initial diagnosis. In this method the performance of the level set segmentation is subject to appropriate initialization and optimal configuration of controlling parameters, which require substantial manual intervention. A new fuzzy level set algorithm is proposed in this paper to facilitate medical image segmentation. It is able to directly evolve from the initial segmentation by spatial fuzzy clustering. The Spatial induced fuzzy c-means using pixel classification and level set methods are utilizing dynamic variational boundaries for image segmentation. The controlling parameters of level set evolution are also estimated from the results of clustering. The fuzzy level set algorithm is enhanced with locally regularized evolution. Such improvements facilitate level set manipulation and lead to more robust segmentation. Performance evaluation of the proposed algorithm was carried on medical images from different modalities. Index Term: Magnetic Resonance Imaging (MRI), K-means, fuzzy c-means, spatial fuzzy clustering with level set method. 1. INTRODUCTION Bladder cancer starts in the cells of the bladder. The bladder, a part of the urinary system, is in the lower part of the abdomen. It is a hollow, balloon-shaped organ with a flexible, muscular wall. Urine is processed by the kidneys. It is then passed to the bladder through 2 tubes called ureters. When the bladder is full, the muscles in the bladder wall tighten to force the urine out of the bladder. The urine empties out of the bladder and passes out of the body through a tube called the urethra. IJECERD © PRJ PUBLICATION International Journal of Electronics and Communication Engineering Research and Development (IJECERD) ISSN 2248– 9525 (Print) ISSN 2248 –9533 (Online) Volume 4, Number 2, April- June (2014), pp. 73-82 © PRJ Publication, http://www.prjpublication.com/IJECERD.asp
  • 2. International Journal of Electronics and Communication Engineering Research and Development (IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014) 74 2. EXISTING METHOD (K-MEANS AND FUZZY C MEANS METHODS) Morphological processing is constructed with operations on sets of pixels. Binary morphology uses only set membership and is indifferent to the value, such as gray level or color, of a pixel. Morphological image processing relies on the ordering of pixels in an image and many times is applied to binary and gray scale images. Through processes such as erosion, dilation, opening and closing, binary images can be modified to the user's specifications. Binary images are images whose pixels have only two possible intensity values. They are normally displayed as black and white. Numerically, the two values are often 0 for black, and either 1 or 255 for white. The rest (usually black) is referred to as the background color. However, depending on the image which is to be threshold, this polarity might be inverted, and in which case the object is displayed with 0 and the background is with a non-zero value. Some morphological operators assume a certain polarity of the binary input image so that if we process an image with inverse polarity the operator will have the opposite effect. For example, if we apply a closing operator to a black text on white background, the text will be opened. Steps for k-means: 1. Give the no of cluster value as k. 2. Randomly choose the k cluster centers 3. Calculate mean or center of the cluster 4. Calculate the distance b/w each pixel to each cluster center 5. If the distance is near to the center then move to that cluster. 6. Otherwise move to next cluster. 7. Re-estimate the center. 8. Repeat the process until the center doesn't move Steps for Fuzzy C-means: I. Initialize U=[uij] matrix, U(0) II. At k-step: calculate the centers vectors C(k)=[cj] with U(k) a. ‫ܥ‬௝ ൌ ∑ ௨೔ೕ ೘ಿ ೔సభ .௫೔ ∑ ௨೔ೕ ೘ಿ ೔సభ III. ‫ܷ݁ݐܽ݀݌ݑ‬ሺ௞ሻ , ܷሺ௞ାଵሻ a. ‫ݑ‬௩ ൌ ଵ ∑ ቆ ቛೣ೔ష೎ೕቛ ฮೣ೔ష೎ೖฮ ቇ మ ೘షభ ೎ ೖసభ IV. If || U (k+1) – U (k)||< ε then STOP; otherwise return to step II.
  • 3. International Journal of Electronics and Communication Engineering Research and Development (IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014) 75 4. PROPOSED ALGORITHM 4.1 Spatial fuzzy clustering and image segmentation In fuzzy clustering, the centroid and the scope of each subclass are estimated adaptively in order to minimize a pre-defined cost function. It is thereby appropriate to take fuzzy clustering as a kind of adaptive thresholding. Fuzzy c-means (FCM) is one of most popular algorithms in fuzzy clustering, and has been widely applied to medical field. The classical FCM algorithm originates from the k-means algorithm. In brief, the k-means algorithm seeks to assign N objects, based on their attributes, into K clusters (K൒N). For medical image segmentation, N equals the number of image pixels NxXNy. The desired results include the centroid of each cluster and the affiliations of N objects. Standard k-means clustering attempts to minimize the cost function ‫ܬ‬ ൌ ෍ ෍ሺԡ݅௡ െ ‫ݒ‬௠ԡሻ ଶ ே ௡ୀଵ ௞ ௠ୀଵ where in is the specific image pixel, ‫ݒ‬௠ the centroid of the ݉௧௛ cluster, and ԡ. ԡ denotes the norm. The ideal results of a k-means algorithm maximize the inter-cluster variations, but minimize the intra- cluster ones. In k-means clustering, every object is limited to one and only one of K clusters. In contrast, an FCM utilizes a membership function ݉௠௡to indicate the degree of membership of the nth object to the ݉௧௛ cluster, which is justifiable for medical image segmentation as physiological tissues are usually not homogeneous. The cost function in an FCM is similar ‫ܬ‬ ൌ ෍ ෍ µ௠௡ ௅ ሺԡ݅௡ െ ‫ݒ‬௠ԡሻ ଶ ஼ ௠ୀଵ ே ௡ୀଵ is a parameter controlling the fuzziness of the resultant segmentation. The membership functions are subject to the following constraints: ෍ µ௠௡ ஼ ௠ୀଵ ൌ 1; 0 ൑ µ௠௡ ൑ 1; ෍ µ୫୬ ே ௡ୀଵ ൐ 0. The membership functions ߤ௠௡ and the centroids vm are updated iteratively µ௠௡ ൌ ԡ݅௡ െ ‫ݒ‬௠ԡ ିଶ ሺ௟ିଵሻൗ ∑ ሺԡ݅௡ െ ‫ݒ‬௞ԡሻିଶሺ೗షభሻ௖ ௞ୀଵ ܸ௜ ൌ ∑ µ௠௡ ௟ே ௡ୀଵ ݅௡ ∑ µ௠௡ ௟ே ௡ୀଵ The standard FCM algorithm is optimized when pixels close to their centroid are assigned high membership values, while those that are far away are assigned low values. One of the problems of standard FCM algorithms in an image segmentation is the lack of spatial
  • 4. International Journal of Electronics and Communication Engineering Research and Development (IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014) 76 information. Since image noise and artifacts often impair the performance of an FCM segmentation, it would be attractive to incorporate spatial information into an FCM. Cai etal. proposed a generalized FCM algorithm that adopts a similarity factor to incorporate local intensity and spatial information. In contrast to the above preparatory weighting, it is also possible to utilize morphological operations to apply spatial restrictions at the post-processing stage. Chuang et al. proposed another spatial FCM algorithm in which spatial information can be incorporated into fuzzy member- ship functions directly using µ௠௡ ′ ൌ µ௠௡ ௣ ݄௠௡ ௤ ∑ ൫µ௞௡ ௣ ݄௞௡ ௤ ൯௖ ௞ୀଵ where p and q are two parameters controlling the respective contribution. The variable hmn includes spatial information by ݄௠௡ ൌ ෍ µ௡௞ ௞ୀேబ where Nn denotes a local window centered around the image pixel n. The weighted mmn and the centroid vm are update. 2.1. Cluster Validity Functions One of the fundamental challenges of clustering is how to evaluate results, without auxiliary information. A common approach for evaluation of clustering results is to use validity indexes. Clustering validation is a technique to find a set of clusters that best fits natural partitions (number of clusters) without any class information. Generally speaking, there are two types of clustering techniques, which are based on external criteria and internal criteria. • External validation: Based on previous knowledge about data. • Internal validation: Based on the information intrinsic to the data alone. Considering these two types of cluster validation to determine the correct number of groups from a dataset, one option is to use external validation indexes for which a priori knowledge of dataset information is required, but it is hard to say if they can be used in real problems. Another option is to use internal validity indexes which do not require a priori information from dataset. The fuzzy clustering based on image intensity is done by initial segmentation which employs level set methods for object refinement by tracking boundary variation. The widely used conventional fuzzy c-means for medical image segmentations has limitations because of its squared-norm distance measure to measure the similarity between centers and data objects of medical images which are corrupted by heavy noise, outliers, and other imaging artifacts. To overcome the limitations the proposed technique Kernel Induced Possibilistic Fuzzy C – Means (KFCM) with Level Set Segmentation has been introduced. Compared to previous method FCM, the proposed KFCM algorithm has significantly improved in the following aspects. First, the KFCM incorporates spatial information during an adaptive optimization, which eliminates the intermediate morphological operations. Second, the controlling parameters of level set segmentation are now derived from the results of fuzzy clustering directly. Finally the proposed algorithm is more robust to noise and outliers, and still retains computational simplicity.
  • 5. International Journal of Electronics and Communication Engineering Research and Development (IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014) 77 3.1. Fuzzy Objective The fuzzy c-means assigns pixels to c partitions by using fuzzy memberships. Let X = {x1, x2, x3… xn} denote an image with n pixels to be partioned into c clusters, where xi (i = 1, 2, 3 ... n) is the pixel intensity. The objective function is to discover nonlinear relationships among data, kernel methods use embedding mappings that map features of the data to new feature spaces. The proposed technique Kernel Induced Possibilistic Fuzzy C-Means (KFCM) is an iterative clustering technique that minimizes the objective function. Given an image dataset, X = {x1…xn}⊂Rp, the original KFCM algorithm partitions X into c fuzzy subsets by minimizing the following objective function as, ‫ܬ‬ሺ‫,ݓ‬ ‫,ݑ‬ ‫ݒ‬ሻ ൌ ෍ ෍ u௜௞ ௠ ሺԡ‫ݔ‬௞ െ ‫ݒ‬௜ԡሻ ଶ ௡ ௞ୀଵ ௖ ௜ୀଵ where c is the number of clusters and selected as a specified value;nis the number of data points, uik the membership of xk in class i, satisfying the ෍ ‫ݑ‬௜௞ ஼ ௜ୀଵ ൌ 1 m the quantity controlling clustering fuzziness, and V the set of cluster centers or prototypes (vi∈Rp). 3.2. Kernel Induced Possibilistic Fuzzy C-Means In fuzzy clustering, the centroid and the scope of each subclass are estimated adaptively in order to minimize a pre-defined cost function. It is one of the most popular algorithms in fuzzy, and has been applied in medical problems. The fuzzy utilizes a membership function to indicate the degree of membership of the nth object to the mth cluster which is justifiable for medical image segmentation, as physiological tissues are usually not homogeneous. The fuzzy utilizes a membership function to indicate the degree of membership in finding the allocate space and allocate resources which is justifiable for medical image segmentation. Kernel Induced Possibilistic Fuzzy C Means (KFCM) clustering algorithm is incorporates the spatial neighborhood information with traditional FCM and updating the objective function of each cluster. The KFCM uses the probabilistic constraint that the memberships of a data point across classes are sum to one. The kernel induced possibilistic c- means algorithm is used to minimize the objective function using Gaussian kernel function. The Gaussian function ηiare estimated using, ߟ௜ ൌ ‫ܭ‬ ∑ ‫ݑ‬௜௞ ௠ 2ሺ1 െ ‫ܭ‬ሺ‫ݔ‬௞, ‫ݒ‬௜ሻሻ௡ ௡ୀଵ ∑ ‫ݑ‬௜௞ ௠௡ ௞ୀଵ The fuzzy membership function uik is that the edges connecting the inner data points in a cluster may have a larger degree of belonging to a cluster than the peripheral‖ edges (which, in a sense, reflects a greater strength of connectivity between a pair of data points). For instance, the edges (indexed i) connecting the inner point in a cluster (indexed k) are assigned uik = 1 whereas the edges linking the boundary points in a cluster have uik< 1.
  • 6. International Journal of Electronics and Communication Engineering Research and Development (IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014) 78 Each cluster is represented by a data point called a cluster center, and the method searches for clusters so as to maximize a fitness function called net similarity. The method is iterative and stops after maximum iterations (default of 500). It automatically determines the number of clusters, based on the input p, which is an Nx1 matrix of real numbers called preferences. A good choice is to set all preference values to the median of the similarity values. The number of identified clusters can be increased or decreased by changing this value accordingly. The objective function in the clustering problem becomes more general so that the weights of data points are being taken into account, as follows: ܵሺܿሻ ൌ ෍ሺ෍ ‫ݑ‬௜ሺ௝ሻ௞ ௠ ,݇ ൅ ෍ ‫ݕ‬௝௞ሺ‫ܥ‬௞ሻ ௡ ௝ୀଵ |஼ೖ| ௜ୀଵ ሻ ௞ ௞ୀଵ where C denotes the decomposition of the given clusters, C1, …, CK are not- necessarily disjoint clusters in the decomposition C, γ denotes the modulating argument, S(C) denotes the total strength of connectivity cluster, designates, as in the edge connectivity of cluster, the weight ui(j)k,k is the membership degree of i(j) containing data point j in cluster k, and finally, it is the fitness of cluster j to cluster k. 3.3. Level Set Segmentation The fuzzy using pixel classification with level set methods utilizes dynamic variational boundaries for image segmentation. Segmenting images by means of active contours is well known approach instead of parametric characterization of active contours. Level set methods embed them into a time dependent PDE function. It is possible to approximate the evolution of active contours implicitly by tracking the zero level set. The level set evolution of active contour implicitly tracking the zero level setΓ(t), ቐ Φሺt, x, yሻ ൏ 0 ሺx, yሻis insde Γሺtሻ Φሺt, x, yሻ ൌ 0 ሺx, yሻis at Γሺtሻ Φሺt, x, yሻ ൐ 0 ሺx, yሻis outside Γሺtሻ 3.4. Fuzzy With Level Set Algorithm Both fuzzy algorithms and level set methods are general-purposed computational model that can be applied to problems of any dimensions. A new fuzzy level set algorithm is proposed for automated medical image segmentation. The algorithm automates the initialization and parameter configuration of the level set segmentation, using Kernel Fuzzy clustering. A new fuzzy level set algorithm automates the initialization and parameter configuration of the level set segmentation, using spatial kernel fuzzy clustering. It employs a KFCM with spatial constraints to determine the approximate contours of interest in a medical image. Benefitting from the flexible initializations, the enhanced level set function can accommodate KFCM results directly for evolution. The enhancement achieves several practical benefits. The objective function now is derived from spatial fuzzy clustering directly. The level set function will automatically slow down the evolution and will become totally dependent on the smoothing term.
  • 7. International Journal of Electronics and Communication Engineering Research and Development (IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014) 79 4. IMPLEMENTATION Step 1: In fuzzy clustering process, the input MRI image and number of clusters areto be initialized. In this process, fuzzy objective function, membership function and weights are calculated. To separate the partition matrix with help of cluster centroid value, the distance matrix is used to find the similarity index value of black and white pixels of the image. In the last iteration, the final partitioned objective function is derived. Step 2: Contour plot is defined to separate the background and foreground region in the image. The regions of object in binary images are found using initial contour and perimeter functions Step 3: 2-D convolution process, Gaussian filter function creates an image smoothness value which returns the central part of the image convolution. Step 4: The image pixel directions are estimated with the help of gradient function which can either be scalars to specify the spacing between points in each direction or vectors to specify the coordinates of the values along corresponding dimensions. The variation in space of any quantity can be represented (e.g. graphically) by a slope. The gradient represents the steepness and direction of that slope. Step 5: The Neumann boundary or second-type boundary condition is a type of boundary condition, named after Carl Neumann. When imposed on an ordinary or a partial differential equation, it specifies the values that the derivative of a solution is to take on the boundary of the domain. Step 6: In Level set evolution there arethree types of processes that are integratedin the final segmentation. (i) The Neumann boundary condition specifies the normal derivative of the function on a surface. (ii) The Direct Adaptive Controller method is used by a controller which must adapt to a controlled system with parameters which vary, or are initially uncertain. (iii) The curvature central method is used to separate the gradient coordinate’s directions and sum of these points is used to find out the position which evaluates the final segmentation. 5. RESULTS The result of experiments and performance evolution were carried on medical images from different modalities, including an ultrasound image, bladder tumors and MRI slice of cancer cells. Both the algorithms of spatial Kernel Fuzzy induced Clustering and fuzzy level set method were implemented in matlab R2008b. The experiments were designed to evaluate the usefulness of initial fuzzy clustering for level set segmentation. It adopted the fast level set algorithm as in the curve optimization, where the initialization was by manual demarcation, intensity thersholding and Spatial KFCM. Due to weak boundaries and strong background noise, manual initialization did not lead to an optimal level set segmentation. The intensity thersholding and fuzzy clustering attracted the dynamic curve quickly to the boundaries of interest.
  • 8. International Journal of Electronics and Communication Engineering Research and Development (IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014) 80 FIG 1: K-MEANS AND FUZZY C-MEANS CLUSTERING FOR MRI OUTPUT OUTPUT INPUT DENOISE SEGEMENTATION K-MEANS CLUSTERING FUZZY C MEANS
  • 9. International Journal of Electronics and Communication Engineering Research and Development (IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014) 81 FIG 2: SPATIAL FUZZY CLUSTERING WITH LEVEL SET FOR MRI CONCLUSION In this paper we have worked with a spatial kernel induced Fuzzy level set algorithm that has been proposed for automated MRI image segmentation. The enhanced FCM algorithms with spatial information can approximate the boundaries of interest well. The level set evolution will start from a region close to the genuine boundaries. The algorithm estimates the controlling parameters from spatial clustering automatically. This has reduced the manual intervention. Finally the fuzzy level set evolution is modified locally by means of spatial fuzzy clustering. All these improvements lead to a robust algorithm for medical image segmentation. INPUT KERNEL INDUCED POSSIBILISTIC FUZZY C- MEANS FUZZY OBJECTIVE LEVEL SET SEGMENTATION OUTPUT
  • 10. International Journal of Electronics and Communication Engineering Research and Development (IJECERD), ISSN 2248-9525(Print), ISSN- 2248-9533 (Online) Volume 4, Number 2, April-June (2014) 82 REFERENCES [1] Chun-Ping Jen, Ching-Te Huang, "Diagnosis of Human Bladder Cancer Cells at Different Stages Using Multispectral Imaging Microscopy" IEEE JOURNAL OF SELECTED TOPICS IN QUANTUM ELECTRONICS, VOL. 20, NO. 3, [2] Ismail Ben Ayed,Polarimetric "Image Segmentation via Maximum-Likelihood Approximation and Efficient Multiphase Level-Sets" IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, VOL. 28, NO. 9, SEPTEMBER 2006 [3] Christos Sakellarios1, Spiros Kostopoulos2, "Segmentation and Classification of Histopathology Images for Abetting Diagnosis in Urinary Bladder Cancer" 4th International Conference on Experiments/Process/System Modeling/Simulation/Optimization 4th IC-EpsMsO Athens, 6-9 July, 2011 [4] Wenhui Li, Jinlong Zhu inJournal" A Medical Image Segmentation Based on Improved Fuzzy Clustering and Level Set" of Information & Computational Science 10:17 (2013) 5599–5606 [5] Ms. M. Parisa Beham Assistant Professor, Department of ECE Vickram College of Engineering Madurai, TamilNadu, India "MORPHOLOGICAL IMAGE PROCESSING APPROACH ON THE DETECTION OF TUMOR AND CANCER CELLS" [6] Feng SHI†1, Jie YANG1, " Automatic segmentation of bladder in CT images*" Journal of Zhejiang University SCIENCE A [7] Manali Patil Samata Prabhu "Brain Tumor Identification Using K-Means Clustering" International Journal of Engineering Trends and Technology- Volume4Issue3- 2013 [8] Wenhui Li, Jinlong Zhu "A Medical Image Segmentation Based on Improved Fuzzy Clustering and Level Set" in Journal of Information & Computational Science, china [9] Pascal Martin, Philippe Re´ fre´ gier," Influence of the Noise Model on Level Set Active Contour Segmentation" in IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, VOL. 26, NO. 6, JUNE 2004 [10] Dzung L. Pham "Adaptive Fuzzy Segmentation of Magnetic Resonance Images", in IEEE TRANSACTIONS ON MEDICAL IMAGING, VOL. 18, NO. 9, SEPTEMBER 1999