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Medico
Faraz et al
About
Approach
Architecture
Results
Conclusion
Depth-wise Separable Atrous Convolution for
Polyps Segmentation in Gastro-Intestinal Tract
Syed Muhammad Faraz Ali, Muhammad Taha Khan, Syed
Unaiz Haider, Talha Ahmed, Zeshan Khan, Muhammad Atif
Tahir
National University of Computer and Emerging Sciences
MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 1 / 6
Medico
Faraz et al
About
Approach
Architecture
Results
Conclusion
About the Challenge
Medico automatic polyp segmentation
Robust and accurate detection of polyps
Detection of polyps with high efficiency
MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 2 / 6
Medico
Faraz et al
About
Approach
Architecture
Results
Conclusion
Approach
Followed ResUNet++ architecture Fig.1
Replaced atrous convolution bridge of ResUNet++ with depth-wise
separable convolution
Replace ResUNet++ bridge with Fig. 2
Models were trained on Mean Intersection over Union (mIoU) loss
Figure 1: Process Flow
Figure 2: DASPP Module
MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 3 / 6
Medico
Faraz et al
About
Approach
Architecture
Results
Conclusion
Architecture
Following 3 architectures were
implemented:
sepv conv resunet++ : ASPP
module from ResUNet++ replaced
with depth-wise separable
convolution.
dsapp resunet++ : ASPP module
replaced with DASPP module
dsapp relu resunet++ :
dsapp resunet++ implemented with
ReLu Activation activation.
Learning curve and results were
compared with UNet and
ResUNet++
Figure 3: Learning Curve
MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 4 / 6
Medico
Faraz et al
About
Approach
Architecture
Results
Conclusion
Results
Model Recall Precision Dice mIoU
Unet 75.23% 84.52% 71.91% 59.53%
resunet++ 64.97% 89.81% 78.35% 69.48%
sepv conv resunet++ 60.55% 93.31% 77.25% 67.56%
dsapp resunet++ 69.72% 82.62% 76.66% 66.71%
dsapp relu resunet++ 61.54% 92.33% 74.63% 66.03%
Table 1: Test Data Results
Model Params GFLOPs
Unet 3,588,997 7,165,148
resunet++ 4,371,265 8,718,068
sepv conv resunet++ 3,047,265 6,070,057
dsapp resunet++ 5,024,705 10,024,898
dsapp relu resunet++ 5,024,705 10,024,898
Table 2: Model Size
MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 5 / 6
Medico
Faraz et al
About
Approach
Architecture
Results
Conclusion
Conclusion and Future Work
Conclusion
Implementation of depth-wise separable convolution resulted in
smaller model size with comparable performance
Going deep in Atrous bridge does not improve performance and
may result in overfitting
Future Work
Training on larger number of epoch
Hyper parameter tuning
Implement depth-wise separable convolution in other module of
fig.1
MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 6 / 6

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Depth-wise Separable Atrous Convolution for Polyps Segmentation in Gastro-Intestinal Tract

  • 1. Medico Faraz et al About Approach Architecture Results Conclusion Depth-wise Separable Atrous Convolution for Polyps Segmentation in Gastro-Intestinal Tract Syed Muhammad Faraz Ali, Muhammad Taha Khan, Syed Unaiz Haider, Talha Ahmed, Zeshan Khan, Muhammad Atif Tahir National University of Computer and Emerging Sciences MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 1 / 6
  • 2. Medico Faraz et al About Approach Architecture Results Conclusion About the Challenge Medico automatic polyp segmentation Robust and accurate detection of polyps Detection of polyps with high efficiency MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 2 / 6
  • 3. Medico Faraz et al About Approach Architecture Results Conclusion Approach Followed ResUNet++ architecture Fig.1 Replaced atrous convolution bridge of ResUNet++ with depth-wise separable convolution Replace ResUNet++ bridge with Fig. 2 Models were trained on Mean Intersection over Union (mIoU) loss Figure 1: Process Flow Figure 2: DASPP Module MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 3 / 6
  • 4. Medico Faraz et al About Approach Architecture Results Conclusion Architecture Following 3 architectures were implemented: sepv conv resunet++ : ASPP module from ResUNet++ replaced with depth-wise separable convolution. dsapp resunet++ : ASPP module replaced with DASPP module dsapp relu resunet++ : dsapp resunet++ implemented with ReLu Activation activation. Learning curve and results were compared with UNet and ResUNet++ Figure 3: Learning Curve MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 4 / 6
  • 5. Medico Faraz et al About Approach Architecture Results Conclusion Results Model Recall Precision Dice mIoU Unet 75.23% 84.52% 71.91% 59.53% resunet++ 64.97% 89.81% 78.35% 69.48% sepv conv resunet++ 60.55% 93.31% 77.25% 67.56% dsapp resunet++ 69.72% 82.62% 76.66% 66.71% dsapp relu resunet++ 61.54% 92.33% 74.63% 66.03% Table 1: Test Data Results Model Params GFLOPs Unet 3,588,997 7,165,148 resunet++ 4,371,265 8,718,068 sepv conv resunet++ 3,047,265 6,070,057 dsapp resunet++ 5,024,705 10,024,898 dsapp relu resunet++ 5,024,705 10,024,898 Table 2: Model Size MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 5 / 6
  • 6. Medico Faraz et al About Approach Architecture Results Conclusion Conclusion and Future Work Conclusion Implementation of depth-wise separable convolution resulted in smaller model size with comparable performance Going deep in Atrous bridge does not improve performance and may result in overfitting Future Work Training on larger number of epoch Hyper parameter tuning Implement depth-wise separable convolution in other module of fig.1 MediaEval’20, Medico Depth-wise Separable Atrous Convolution for Segmentation 6 / 6