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Nguyen Thanh Sang
Network Science Lab
Dept. of Artificial Intelligence
The Catholic University of Korea
E-mail: sang.ngt99@gmail.com
2023-04-07
1
 Paper
 Introduction
 Problem
 Contributions
 Framework
 Experiment
 Conclusion
2
Hierarchical graph structure
• Hierarchical structure is pervasive across complex networks with examples spanning from
neuroscience, economics, social organizations, urban systems, communications,
pharmaceuticals and biology, particularly metabolic and gene networks.
3
Problems
 Many embedding methods can be used in the node classification task by converting the graph
structure into sequences by performing random walks on the graph and computing co-
occurrence statistics.
=> unsupervised algorithms and cannot perform node classification tasks in an end-to-end
applications.
4
Problems
 Graph convolutional networks (GCNs) generates node embedding by combining information
from neighborhoods.
 lack the “graph pooling” mechanism, which restricts the scale of the receptive field.
 difficulty in obtaining adequate global information.
 adding too many convolutional layers will result in the output features over-smoothed and
make them indistinguishable
5
Problems
 Some recent methods try to get the global information through deeper models.
 they are either unsupervised models or need many training examples.
 they are still not capable of solving the semi-supervised node classification task directly.
6
Contributions
• First work to design a deep hierarchical model for the semi-supervised node classification task
which consists of more layers with larger receptive fields.
 obtain more global information through the coarsening and refining procedures.
• Applying deep architectures and the pooling mechanism into classification tasks.
• The proposed model outperforms other state-of-the-art approaches and gains a considerable
improvement over other approaches with very few labeled samples provided for each class.
7
Overview
• For each coarsening layer, the GCN is conducted to learn node representations.
• A coarsening operation is performed to aggregate structurally similar nodes into hyper-nodes.
 each hyper-node represents a local structure of the original graph, which can facilitate exploiting global
structures on the graph.
• Following coarsening layers, a symmetric graph refining layers is applied to restore the original graph
structure for node classification tasks.
 comprehensively capture nodes’ information from local to global perspectives, leading to better node
representations.
8
Graph Convolutional Networks
• Update node representation by using neighbor features.
9
Graph Coarsening Layer
 Two steps:
• Structural equivalence grouping (SEG). If two nodes
share the same set of neighbors, they are considered to
be structurally equivalent.
 assign these two nodes to be a hyper-node.
• Structural similarity grouping (SSG). Then, we
calculate the structural similarity between the
unmarked node pairs.
=> form a new hyper-node and mark the two nodes by
largest structural similarity. The largest structural similarity
is defined by comparing the normalized connection
strength:
10
Graph Coarsening Layer
• The hidden node embedding matrix is determined as:
• Update adjacency matrix:
 The hidden representation is fed into the next layer as
input.
 The resulting node embedding to generate in each
coarsening layer will then be of lower resolution.
11
Graph Refining Layer
• To restore the original topological structure of the graph and further facilitate node
classification
 stacking the same numbers of graph refining layers as coarsening layers.
• Each refining layer contains two steps:
o generating node embedding vectors
o restoring node representations.
• A residual connections between the two corresponding coarsening and refining layers.
12
Node Weight Embedding and Multiple Channels
• Multi-channel mechanisms help explore
features in different subspaces and H-GCN
employs multiple channels on GCN to
obtain rich information jointly at each layer
13
The Output Layer
• Softmax classifier:
• The loss function is defined as the cross-entropy of predictions over the labeled nodes:
14
Datasets
• Four widely-used datasets including three citation networks and one knowledge graph.
15
Experiment
• The proposed method consistently outperforms
other state-of-the-art methods, which verify the
effectiveness of the proposed coarsening and
refining mechanisms.
• DeepWalk cannot model the attribute information,
which heavily restricts its performance.
• The proposed H-GCN manages to capture global
information through different levels of
convolutional layers and achieves the best results
among all four datasets.
16
Impact of Scale of Training Data
• The proposed method outperforms other baselines
in all cases.
• With the number of labeled data decreasing, it
obtains a more considerable margin over these
baseline algorithms.
• The proposed H-GCN with increased receptive
fields is well-suited when training data is extremely
scarce and thereby is of significant practical values.
17
Coarsening, refining layers and embedding weights
• The proposed H-GCN has better performance
compared to H-GCN without coarsening mechanisms
on all datasets.
=> The coarsening and refining mechanisms contribute
to performance improvements since they can obtain
global information with larger receptive fields.
• Model with node weight embeddings performs
better,
 the necessity to add this embedding vector in the
node embeddings.
18
Comparing with number of coarsening layers and channels
• Since fewer labeled nodes are supplied on NELL than
others, deeper layers and larger receptive fields are needed.
• Adding too many coarsening layers, the performance drops
due to overfitting.
• The performance improves with the number of channels
increasing until four channels => help capture accurate
node features.
• Too many channels will inevitably introduce redundant
parameters to the model, leading to overfitting as well.
19
Conclusions
• A novel hierarchical graph convolutional networks for the semi-supervised node
classification task.
• The H-GCN model consists of coarsening layers and symmetric refining layers.
• By grouping structurally similar nodes to hyper-nodes, this model can get a larger receptive
field and enable sufficient information propagation.
• Compared with other previous work, H-GCN is deeper and can fully utilize both local and
global information.
• The has achieved substantial gains over them in the case that labeled data is extremely
scarce.
20

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NS-CUK Seminar: S.T.Nguyen, Review on "Hierarchical Graph Convolutional Networks for Semi-supervised Node Classification", IJCAI 2019

  • 1. Nguyen Thanh Sang Network Science Lab Dept. of Artificial Intelligence The Catholic University of Korea E-mail: sang.ngt99@gmail.com 2023-04-07
  • 2. 1  Paper  Introduction  Problem  Contributions  Framework  Experiment  Conclusion
  • 3. 2 Hierarchical graph structure • Hierarchical structure is pervasive across complex networks with examples spanning from neuroscience, economics, social organizations, urban systems, communications, pharmaceuticals and biology, particularly metabolic and gene networks.
  • 4. 3 Problems  Many embedding methods can be used in the node classification task by converting the graph structure into sequences by performing random walks on the graph and computing co- occurrence statistics. => unsupervised algorithms and cannot perform node classification tasks in an end-to-end applications.
  • 5. 4 Problems  Graph convolutional networks (GCNs) generates node embedding by combining information from neighborhoods.  lack the “graph pooling” mechanism, which restricts the scale of the receptive field.  difficulty in obtaining adequate global information.  adding too many convolutional layers will result in the output features over-smoothed and make them indistinguishable
  • 6. 5 Problems  Some recent methods try to get the global information through deeper models.  they are either unsupervised models or need many training examples.  they are still not capable of solving the semi-supervised node classification task directly.
  • 7. 6 Contributions • First work to design a deep hierarchical model for the semi-supervised node classification task which consists of more layers with larger receptive fields.  obtain more global information through the coarsening and refining procedures. • Applying deep architectures and the pooling mechanism into classification tasks. • The proposed model outperforms other state-of-the-art approaches and gains a considerable improvement over other approaches with very few labeled samples provided for each class.
  • 8. 7 Overview • For each coarsening layer, the GCN is conducted to learn node representations. • A coarsening operation is performed to aggregate structurally similar nodes into hyper-nodes.  each hyper-node represents a local structure of the original graph, which can facilitate exploiting global structures on the graph. • Following coarsening layers, a symmetric graph refining layers is applied to restore the original graph structure for node classification tasks.  comprehensively capture nodes’ information from local to global perspectives, leading to better node representations.
  • 9. 8 Graph Convolutional Networks • Update node representation by using neighbor features.
  • 10. 9 Graph Coarsening Layer  Two steps: • Structural equivalence grouping (SEG). If two nodes share the same set of neighbors, they are considered to be structurally equivalent.  assign these two nodes to be a hyper-node. • Structural similarity grouping (SSG). Then, we calculate the structural similarity between the unmarked node pairs. => form a new hyper-node and mark the two nodes by largest structural similarity. The largest structural similarity is defined by comparing the normalized connection strength:
  • 11. 10 Graph Coarsening Layer • The hidden node embedding matrix is determined as: • Update adjacency matrix:  The hidden representation is fed into the next layer as input.  The resulting node embedding to generate in each coarsening layer will then be of lower resolution.
  • 12. 11 Graph Refining Layer • To restore the original topological structure of the graph and further facilitate node classification  stacking the same numbers of graph refining layers as coarsening layers. • Each refining layer contains two steps: o generating node embedding vectors o restoring node representations. • A residual connections between the two corresponding coarsening and refining layers.
  • 13. 12 Node Weight Embedding and Multiple Channels • Multi-channel mechanisms help explore features in different subspaces and H-GCN employs multiple channels on GCN to obtain rich information jointly at each layer
  • 14. 13 The Output Layer • Softmax classifier: • The loss function is defined as the cross-entropy of predictions over the labeled nodes:
  • 15. 14 Datasets • Four widely-used datasets including three citation networks and one knowledge graph.
  • 16. 15 Experiment • The proposed method consistently outperforms other state-of-the-art methods, which verify the effectiveness of the proposed coarsening and refining mechanisms. • DeepWalk cannot model the attribute information, which heavily restricts its performance. • The proposed H-GCN manages to capture global information through different levels of convolutional layers and achieves the best results among all four datasets.
  • 17. 16 Impact of Scale of Training Data • The proposed method outperforms other baselines in all cases. • With the number of labeled data decreasing, it obtains a more considerable margin over these baseline algorithms. • The proposed H-GCN with increased receptive fields is well-suited when training data is extremely scarce and thereby is of significant practical values.
  • 18. 17 Coarsening, refining layers and embedding weights • The proposed H-GCN has better performance compared to H-GCN without coarsening mechanisms on all datasets. => The coarsening and refining mechanisms contribute to performance improvements since they can obtain global information with larger receptive fields. • Model with node weight embeddings performs better,  the necessity to add this embedding vector in the node embeddings.
  • 19. 18 Comparing with number of coarsening layers and channels • Since fewer labeled nodes are supplied on NELL than others, deeper layers and larger receptive fields are needed. • Adding too many coarsening layers, the performance drops due to overfitting. • The performance improves with the number of channels increasing until four channels => help capture accurate node features. • Too many channels will inevitably introduce redundant parameters to the model, leading to overfitting as well.
  • 20. 19 Conclusions • A novel hierarchical graph convolutional networks for the semi-supervised node classification task. • The H-GCN model consists of coarsening layers and symmetric refining layers. • By grouping structurally similar nodes to hyper-nodes, this model can get a larger receptive field and enable sufficient information propagation. • Compared with other previous work, H-GCN is deeper and can fully utilize both local and global information. • The has achieved substantial gains over them in the case that labeled data is extremely scarce.
  • 21. 20