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Biochemistry _ serum protein separation

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Biochemistry _ serum protein separation

  1. 1. Biochemistry and molecular biology lab Lecture 18 Serum protein separation by cellulose acetate membrane electrophoresis
  2. 2. Biochemistry and molecular biology lab Aim  Learn the principle of cellulose acetate membrane electrophoresis  Know the operation and clinical significance of electrophoresis
  3. 3. Biochemistry and molecular biology lab Principle  Electrophoresis: is the motion of charged particles relative to a fluid under the influence of an electric field. Factors determining the electrophoresis motion : charge, size, sharp Based on different supporting materials, there are membrane electrophoresis and gel electrophoresis • Gel electrophoresis is the process by which molecules in a sample can be separated by charge and/or size.
  4. 4. Biochemistry and molecular biology lab Lab equipments  electrophoresis device electrophoresis chamber DYY-2 model power supply The connection between electrophoresis chamber and power supply
  5. 5. Biochemistry and molecular biology lab  cellulose acetate membrane (2 cm×8 cm )  Petri dish:staining and rinsing  Sample applicator (plastic slice)  Filter paper  Watch glass  Forceps
  6. 6. Biochemistry and molecular biology lab  Rocking table  722 model spectrophotometer
  7. 7. Biochemistry and molecular biology lab Reagents  fresh serum  Barbitone sodium Buffer (pH8.6)  Staining solution(amido black 10B)  Destaining solution  0.4mol/L NaOH
  8. 8. Biochemistry and molecular biology lab Experimental steps 1. Membrane preparation Soaking the membrane with buffer for more than 30 mTinak;e the membrane with forceps, place the membrane between two pieces of filter paper to dry the buffer (not too dry), and differentiate between the smooth and rough surface (rough surface faces up). Note:Only touch the margins of the membrane
  9. 9. Biochemistry and molecular biology lab 2. Sample spotting: Take a small amount of serum with the plastic slice, and stamp on the membrane Notes: Mark with pencil  Spotting on the rough surface, 1.5cm from one membrane short edge  softly press for 1-2 sec, let the serum absorbed by the membrane  Spotting only once, no need to repeat  Spot requirements: thin, straight and not reaching the long edge
  10. 10. Biochemistry and molecular biology lab 3. Place the sample: Connect the power supply with electrophoresis chamber Let the rough surface faces down, the spotting side is placed at the cathode (-) side (Note: do not let the spot overlap with the supporting paper) Remove bubbles between the membrane and supporting paper
  11. 11. Biochemistry and molecular biology lab 4. Electrophoresis :  Make sure that the membrane is wet  Pre-electrophoresis:50V, 5min  Electrophoresis:Stable voltage, 110V, 40 min
  12. 12. Biochemistry and molecular biology lab 4. Staining and rinsing : Staining:Transfer the membrane using forceps to the Amido black 10B and stain for 3 min Note:Only touch the margin regions of the membrane with forceps;Completely submerge every membranes into the staining solution, no overlapping. Rinsing:detaining on the rocking table for 3 times (8 min; 7 min; 6 min) serum albumin globulins Starting point
  13. 13. Biochemistry and molecular biology lab 5. Quantification: Cut each bands and a part of the blank membrane, add 4ml NaOH respectively and shake for 15 min. Determine the light absorbance at 620 nm. 6. Calculation: Total absorbance: T= A +α1+ α2+ β+γ Percentage = ( X/ T ) ×100% A/G = A/(α1+ α2+ β+γ)
  14. 14. Biochemistry and molecular biology lab Results serum albumin α1 -globulins α2 -globulins β- globulins γ- globulins
  15. 15. Biochemistry and molecular biology lab Normal range • serum albumin 57.45-71.73% • α1-globulins 1.76-4.48% • α2-globulins 4.04-8.28% • β-globulins 6.79-11.39% • γ-globulins 11.85-22.97% • A/G 1.24-2.36
  16. 16. Biochemistry and molecular biology lab Clinical significance  Most of serum protein is produced by liver ,only γ-globulins produced by plasma cells  The function of serum proteins : Maintain plasma colloid osmotic pressures; maintain plasm pH balance, base-acid balance; Transport nutrients, metabolites, hormones, medicines and metal ions.
  17. 17. Biochemistry and molecular biology lab  liver cirrhosis:serum albumin, α1, α2 ↓,γ- globulins ↑↑;  Hepatocarcinoma:between albumin and globulins, there is an alpha feto protein (AFP) band ;  acute and chronic nephritis & nephrotic syndrome : serum albumin ↓ , α2 and β globulins ↑;  Multiple myeloma : serum albumin ↓ ,γ- globulins ↑ ,between β and γ- globulins, there is a “M” band
  18. 18. Biochemistry and molecular biology lab Assignment questions 1.Which side (anode or cathode) shall we place the sample during electrophoresis? Why? 2. What are the possible reasons causing the irregular, distorted or atypical electrophoresis bands?
  19. 19. Biochemistry and molecular biology lab Other electrophoresis techniques : 1、SDS-Polyacrylamide Gel Electrophoresis usually used for protein molecular weight determination
  20. 20. Biochemistry and molecular biology lab 2、Isoelectric focusing electrophoresis: a technique for separating different molecules by differences in their isoelectric point (pI) 3、2D electrophoresis: an important technique in the proteomics 4、Agarose gel electrophoresis: DNA or RNA separation
  21. 21. Biochemistry and molecular biology lab Agarose Gel Electrophoresis Gel electrophoresis is a widely used technique for the analysis of nucleic acids and proteins. Agarose gel electrophoresis is routinely used for the preparation and analysis of DNA. Gel electrophoresis is a procedure that separates molecules on the basis of their rate of movement through a gel under the influence of an electrical field. We will be using agarose gel electrophoresis to determine the presence and size of PCR products.
  22. 22. Biochemistry and molecular • DNA is negatively charged. biology lab • When placed in an electrical field, DNA will migrate toward the positive pole (anode). • An agarose gel is used to slow the movement of DNA and separate by size. - + Power DNA • Polymerized agarose is porous, allowing for the movement of DNA Scanning Electron Micrograph of Agarose Gel (1×1 μm) 
  23. 23. Biochemistry and molecular biology lab How fast will the DNA migrate? strength of the electrical field, buffer, density of agarose gel… Size of the DNA! *Small DNA move faster than large DNA …gel electrophoresis separates DNA according to size - + Power DNA small large Within an agarose gel, linear DNA migrate inversely proportional to the log10 of their molecular weight.
  24. 24. Biochemistry and molecular Agar boioslogey lab D-galactose 3,6-anhydro L-galactose •Sweetened agarose gels have been eaten in the Far East since the 17th century. •Agarose was first used in biology when Robert Koch used it as a culture medium for Tuberculosis bacteria in 1882 Agarose is a linear polymer extracted from seaweed.
  25. 25. Biochemistry and molecular biology lab Making an Agarose Gel An agarose gel is prepared by combining agarose powder and a buffer solution. Buffer

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