Apidays New York 2024 - Scaling API-first by Ian Reasor and Radu Cotescu, Adobe
FruitBreedomics KOM 29 03-2011 1 introduction
1. The new EU project Fruit Breedomics *: an integrated approach for increasing breeding efficiency in apple and peach Laurens F. , Aranzana M.J. , Arus P. , Bonany J. , Corelli L. Patocchi A. , Peil, A. , Quilot B., Stella A., Troillard V., Velasco R., van de Weg E, … * FP7 large collaborative Fruit Breedomics
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9. Structure of FruitBreedomics WP1 Breeding 1. Breeding strategies 2. Fine mapping 3. Pilot studies 4. Pipeline 5. DB interface WP2 Pre-Breeding 1. Material evaluation 2. Conventional pre breeding 3. Fast prebreeding European Breeding Platform Fruit Breedomics
10. Structure of FruitBreedomics WP1 Breeding 1. Breeding strategies 2. Fine mapping 3. Pilot studies 4. Pipeline 5. DB interface WP2 Pre-Breeding 1. Material evaluation 2. Conventional pre breeding 3. Fast prebreeding European Breeding Platform Diversity and QTL mapping WP3 PBA 3. QTL Fine mapping 2. QTL new traits 5. Wider QTL mining 4. Genet. div . in EU Breeding 6. QTL validation 1. Adaptation Flex WP4 LD/GA 1. Phen & genet variability 2. Core collection 3. QTL mapping by GWA Fruit Breedomics
11. Structure of FruitBreedomics WP5 Trait knowledge 1. Biotic stresses : Monilia 2. Fruit quality : texture, fiber 3. Abiotic stresses: chilling reqrt, water stress WP1 Breeding 1. Breeding strategies 2. Fine mapping 3. Pilot studies 4. Pipeline 5. DB interface WP2 Pre-Breeding 1. Material evaluation 2. Conventional pre breeding 3. Fast prebreeding European Breeding Platform Diversity and QTL mapping WP3 PBA 3. QTL Fine mapping 2. QTL new traits 5. Wider QTL mining 4. Genet. div . in EU Breeding 6. QTL validation 1. Adaptation Flex WP4 LD/GA 1. Phen & genet variability 2. Core collection 3. QTL mapping by GWA Fruit Breedomics
12. Structure of FruitBreedomics RosBREED (US) GDR WP5 Trait knowledge 1. Biotic stresses 2. Fruit quality 3. Abiotic stresses WP1 Breeding 1. Breeding strategies 2. Fine mapping 3. Pilot studies 4. Pipeline 5. DB interface WP2 Pre-Breeding 1. Material evaluation 2. Conventional pre breeding 3. Fast prebreeding European Breeding Platform Diversity and QTL mapping WP3 PBA 3. QTL Fine mapping 2. QTL new traits 5. Wider QTL mining 4. Genet. div . in EU Breeding 6. QTL validation 1. Adaptation Flex WP4 LD/GA 1. Phen & genet variability 2. Core collection 3. QTL mapping by GWA Fruit Breedomics WP7 bioinfo FruitBreed DB
13. Structure of FruitBreedomics PFR RosBREED ARC WP5 Trait knowledge 1. Biotic stresses 2. Fruit quality 3. Abiotic stresses WP1 Breeding 1. Breeding strategies 2. Fine mapping 3. Pilot studies 4. Pipeline 5. DB interface WP2 Pre-Breeding 1. Material evaluation 2. Conventional pre breeding 3. Fast prebreeding European Breeding Platform Diversity and QTL mapping WP3 PBA 3. QTL Fine mapping 2. QTL new traits 5. Wider QTL mining 4. Genet. div . in EU Breeding 6. QTL validation 1. Adaptation Flex WP4 LD/GA 1. Phen & genet variability 2. Core collection 3. QTL mapping by GWA Fruit Breedomics WP6 SNP chips Low Medium Low cost MAB High
14. Structure of FruitBreedomics WP8 Dissemination WP9. Management WP5 Trait knowledge 1. Biotic stresses 2. Fruit quality 3. Abiotic stresses WP1 Breeding 1. Breeding strategies 2. Fine mapping 3. Pilot studies 4. Pipeline 5. DB interface WP2 Pre-Breeding 1. Material evaluation 2. Conventional pre breeding 3. Fast prebreeding European Breeding Platform Diversity and QTL mapping WP3 PBA 3. QTL Fine mapping 2. QTL new traits 5. Wider QTL mining 4. Genet. div . in EU Breeding 6. QTL validation 1. Adaptation Flex WP4 LD/GA 1. Phen & genet variability 2. Core collection 3. QTL mapping by GWA Fruit Breedomics WP6 SNP chips Low Medium Low cost MAB High WP7 bioinfo FruitBreed DB Tools
15. Structure of FruitBreedomics WP8 Dissemination WP9. Management WP5 Trait knowledge 1. Biotic stresses 2. Fruit quality 3. Abiotic stresses WP1 Breeding 1. Breeding strategies 2. Fine mapping 3. Pilot studies 4. Pipeline 5. DB interface WP2 Pre-Breeding 1. Material evaluation 2. Conventional pre breeding 3. Fast prebreeding European Breeding Platform Diversity and QTL mapping WP3 PBA 3. QTL Fine mapping 2. QTL new traits 5. Wider QTL mining 4. Genet. div . in EU Breeding 6. QTL validation 1. Adaptation Flex WP4 LD/GA 1. Phen & genet variability 2. Core collection 3. QTL mapping by GWA Fruit Breedomics WP6 SNP chips Low Medium Low cost MAB High WP7 bioinfo FruitBreed DB Tools Breeding stakeholders Germplasm curators
16. Interactions within FruitBreedomics WP5 Trait knowledge 1. Biotic stresses 2. Fruit quality 3. Abiotic stresses WP1 Breeding 1. Breeding strategies 2. Fine mapping 3. Pilot studies 4. Pipeline 5. DB interface WP2 Pre-Breeding 1. Material evaluation 2. Conventional pre breeding 3. Fast prebreeding European Breeding Platform Diversity and QTL mapping WP3 PBA 3. QTL Fine mapping 2. QTL new traits 5. Wider QTL mining 4. Genet. div . in EU Breeding 6. QTL validation 1. Adaptation Flex WP4 LD/GA 1. Phen & genet variability 2. Core collection 3. QTL mapping by GWA Fruit Breedomics
17. 15 22 23 24 16 18 19 20 21 3 4 7 14 17 13 12 10 9 8 6 5 2 11 Israël NZ Chine Afrique du Sud 1 + close links with : Rosbreed (WSU) … Fruit Breedomics
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19. Acknowledgement to the Fruit Breedomics consortium The most difficult (but the most challenging) is to come!! Fruit Breedomics
20. Acknowledgement to the Fruit Breedomics consortium The most difficult (but the most challenging) is to come!! Fruit Breedomics
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