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POST-TRANSLATIONAL MODIFICATION
Prof (Dr) V P AcharyaMD,PhD
KIMS & PBH Hospital, Bhubaneswar
Post-translational modification of Polypeptide
Protein folding
Proteolytic cleavage Intein splicing
Covalent modification
Different structures
Insulin, Zymogens
Inteins removed & Exteins spliced
a. Phosphorylation
b. Hydroxylation
c. Glycosylation
d. Carboxylation
e. Ubiquitylation
Amino terminal and carboxyl terminal
modifications
 1st residue- N- formylmethionine (bacteria) or
Met (eukaryotes)
 Formyl group and amino terminal residues is
mostly removed
 50% eukaryotic proteins- NH3 group of amino
terminal residue is N-acetylated
 Carboxyl terminal also may be modified
 15-30 residues at the amino-terminal act as
signal sequences to direct a protein to its
target– later they are removed
Modifications of individualAA residues
 Phosphorylation- -OH groups of Ser,Thr ,Tyr are
enzymatically phosphorylated by ATP– adds
negative charge to the protein
 Casein binds to Ca+2 due to this negative charge due
to phosphoserine groups
 Phosphorylation and dephosphorylation regulate
many enzymes and proteins
 Carboxylation - γ- carboxylation of Prothrombin-
requiresVitamin K
 Glycosylation - N-linked oligosaccharides (attached
to Asn) and O- linked oligosaccharides (Ser/Thr
residues)
 Isoprenylation - thioether bond formed between Cys
and isoprene
Additionof prosthetic groups
 Prosthetic groups bound to proteins by
covalent groups
 Hb / Cyt C- Heme group
 Biotin- Acetyl CoA-carboxylase
 Proteolytic processing- Proinsulin, viral
proteins, proteases
 Formation of disulfide cross-links- Insulin
Inhibitors ofTranslation
A. Reversible inhibitor
a.Tetracyclin– Binds to 30s ribosome
↓
Inhibit attachment of aminoacyl tRNA to the A site
(bacteriostatic)
b. Chloramphenicol– Inhibits peptidyl
transferase- prevents elongation of peptide
chain
c. Erythromycin & Clindamycin– Prevent
translocation by binding to 50s subunit of
bacterial ribosome
B.Irreversibleinhibitor
Streptomycin and
Aminoglycosides—Bind to 30s ribosomal sub-
unit
Low conc.- Misreading of protein
↓
Useless bacterial proteins
Pharma. Conc.- Inhibit IC synthesis
↓
Protein synthesis inhibited
C. Inhibitors in mammals
1. Puromycin– Structural analogue of tyrosinyl t-
RNA
2. Cycloheximide– Inhibits peptidyl transferase
3. Diphtheria toxin—Inactivation of EF-2 by
attachment of ADP to EF-2
4. Ricin– Inactivates 28s rRNA
KNOWLEDGE HAS NO COPYRIGHT
ProteinTargeting/Sortingofproteins
For more ppt onMedicalBiochemistrypleasevisit
www.vpacharya.com

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Post translational modification by Prof Viyatprajna Acharya

  • 1. POST-TRANSLATIONAL MODIFICATION Prof (Dr) V P AcharyaMD,PhD KIMS & PBH Hospital, Bhubaneswar
  • 2. Post-translational modification of Polypeptide Protein folding Proteolytic cleavage Intein splicing Covalent modification Different structures Insulin, Zymogens Inteins removed & Exteins spliced a. Phosphorylation b. Hydroxylation c. Glycosylation d. Carboxylation e. Ubiquitylation
  • 3. Amino terminal and carboxyl terminal modifications  1st residue- N- formylmethionine (bacteria) or Met (eukaryotes)  Formyl group and amino terminal residues is mostly removed  50% eukaryotic proteins- NH3 group of amino terminal residue is N-acetylated  Carboxyl terminal also may be modified  15-30 residues at the amino-terminal act as signal sequences to direct a protein to its target– later they are removed
  • 4. Modifications of individualAA residues  Phosphorylation- -OH groups of Ser,Thr ,Tyr are enzymatically phosphorylated by ATP– adds negative charge to the protein  Casein binds to Ca+2 due to this negative charge due to phosphoserine groups  Phosphorylation and dephosphorylation regulate many enzymes and proteins  Carboxylation - γ- carboxylation of Prothrombin- requiresVitamin K  Glycosylation - N-linked oligosaccharides (attached to Asn) and O- linked oligosaccharides (Ser/Thr residues)  Isoprenylation - thioether bond formed between Cys and isoprene
  • 5. Additionof prosthetic groups  Prosthetic groups bound to proteins by covalent groups  Hb / Cyt C- Heme group  Biotin- Acetyl CoA-carboxylase
  • 6.  Proteolytic processing- Proinsulin, viral proteins, proteases  Formation of disulfide cross-links- Insulin
  • 7. Inhibitors ofTranslation A. Reversible inhibitor a.Tetracyclin– Binds to 30s ribosome ↓ Inhibit attachment of aminoacyl tRNA to the A site (bacteriostatic) b. Chloramphenicol– Inhibits peptidyl transferase- prevents elongation of peptide chain c. Erythromycin & Clindamycin– Prevent translocation by binding to 50s subunit of bacterial ribosome
  • 8. B.Irreversibleinhibitor Streptomycin and Aminoglycosides—Bind to 30s ribosomal sub- unit Low conc.- Misreading of protein ↓ Useless bacterial proteins Pharma. Conc.- Inhibit IC synthesis ↓ Protein synthesis inhibited
  • 9. C. Inhibitors in mammals 1. Puromycin– Structural analogue of tyrosinyl t- RNA 2. Cycloheximide– Inhibits peptidyl transferase 3. Diphtheria toxin—Inactivation of EF-2 by attachment of ADP to EF-2 4. Ricin– Inactivates 28s rRNA
  • 10. KNOWLEDGE HAS NO COPYRIGHT
  • 12. For more ppt onMedicalBiochemistrypleasevisit www.vpacharya.com

Hinweis der Redaktion

  1. Protein splicing is an intramolecular reaction of a particular protein in which an internal protein segment (called an intein) is removed from a precursor protein with a ligation of C-terminal and N-terminal external proteins (called exteins) on both sides. The splicing junction of the precursor protein is mainly a cysteine or a serine, which are amino acids containing a nucleophilic side chain. The protein splicing reactions which are known now do not require exogenous cofactors or energy sources such as adenosine triphosphate (ATP) or guanosine triphosphate (GTP). Normally, splicing is associated only with pre-mRNA splicing. This precursor protein contains three segments—an N-extein followed by the intein followed by a C-extein. After splicing has taken place, the resulting protein contains the N-extein linked to the C-extein; this splicing product is also termed an extein.