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Bio-synthesis of citric acid from single and
co-culture-based fermentation technology
using agro-wastes
Sohaib Rafaqat Ali, Zahid Anwar, Muhammad Irshad*
, Saima Mukhtar,
Nabeela Tariq Warraich
Department of Biochemistry and Molecular Biology, Faculty of Sciences, University of Gujrat, Pakistan
a r t i c l e i n f o
Article history:
Received 18 May 2015
Received in revised form
2 August 2015
Accepted 2 September 2015
Available online 31 October 2015
Keywords:
Citric acid
SSF
Optimization
Aspergillus ornatus
Alternaria alternata
a b s t r a c t
Agro-based materials are primarily composed of complex polysaccharides that strengthen
microbial growth for the production of industrially relevant value-added products.
Therefore, in the present study, solid state fermentation (SSF) was carried out using agro-
based waste materials (apple pomace, peanut shell and a mixture of both apple pomace
and peanut shell with 50:50 ratio) as carriers/support for SSF to enhance citric acid pro-
duction from single and co-culture consortia of Aspergillus ornatus and Alternaria alternata.
During initial screening trial it was observed that growth media supplemented with apple
pomace under SSF process of co-culture consortia presenting the preeminent
0.46 ± 0.42 mg/mL of citric acid. On partial optimization co-culture showed the maximum
citric acid yield (2.644 ± 0.99 mg/mL) in the presence of arginine as a nutritional ingredient
at 30 
C in an apple pomace based medium at 50% moisture content with pH of 5 and
substrate concentration (25 g) after 48th of solid state fermentation. In conclusion, a
suitable addition of fermentative substrate to the SSF medium increased fungal growth,
sugar utilization and citric acid production when used in lower concentrations.
Copyright © 2015, The Egyptian Society of Radiation Sciences and Applications. Production
and hosting by Elsevier B.V. This is an open access article under the CC BY-NC-ND license
(http://creativecommons.org/licenses/by-nc-nd/4.0/).
1. Introduction
Citric acid is one among the most versatile organic acid and
broadly used for multipurpose in different industries
including food, cosmetics, pharmacy, beverages and many
others (Blair and Stall, 1993). Apart from its consumption as a
food additive, citric acid is also considered as an indispensable
component of various pharmaceuticals, synthetic detergents,
cosmetics, and many other value-added products. Sales of
citric acid worldwide are divided amongst the principle fields
of use including food, confectionery  beverages (75%), phar-
maceuticals (10%) and other industries (15%). The use of citric
acid as a food acidulate depends in part on its strength as an
acid. However, its pleasant taste and its property of enhancing
existing flavors have ensured its dominant position in market
(Kapoor, Choudhry,  Tauro, 1982). There is an immense need
to investigate the factors responsible for low citric acid yields
and to develop strategies to increase yield and reduce pro-
duction cost (Milson  Meers, 1985).
* Corresponding author. Tel.: þ92 344 4931030.
E-mail addresses: mirshad.uog@gmail.com, muhammad.irshad@uog.edu.pk (M. Irshad).
Peer review under responsibility of The Egyptian Society of Radiation Sciences and Applications.
HOSTED BY Available online at www.sciencedirect.com
ScienceDirect
Journal of Radiation Research and Applied
Sciences
journal homepage: http://www.elsevier.com/locate/jrras
J o u r n a l o f R a d i a t i o n R e s e a r c h a n d A p p l i e d S c i e n c e s 9 ( 2 0 1 6 ) 5 7 e6 2
http://dx.doi.org/10.1016/j.jrras.2015.09.003
1687-8507/Copyright © 2015, The Egyptian Society of Radiation Sciences and Applications. Production and hosting by Elsevier B.V. This is an
open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
A range of various physicochemical and nutritional factors
are considered very critical which can ultimately influence the
growth of microbial strains and the end product. Moisture
content, substrate particle sizes, nutrient sources, incubation
temperature, pH and inoculum size are among major factors
(Bari, Alam, Muyibi,  Jamal, 2009; Bari, Alam, Muyibi, Jamal, 
Al-Mamun, 2010; Ellaiah, Srinivasulu,  Adinarayana, 2004;
Lotfy, Ghanem,  El-Helow, 2007). So far, the influence of
fermentation types including SSF, SmF and LSF and concen-
trations of fermentative substrates, sugars, metal ions, and
aeration on citric acid production have been studied and re-
ported elsewhere (Al-Mahin, Hasan, Khan,  Begum, 2008;
Bayraktar  Mehmetoglu, 2000; Xu, Madrid, R€ohr,  Kubicek,
1989).
Enormous quantities of agro-based industrial waste ma-
terials are generated throughout the world from the pro-
cessing of raw agriculture materials (Anwar, Gulfraz, 
Irshad, 2014; Ghaffar et al., 2014). Thus, agro-based indus-
trial residues from the processing of sugarcane, orange,
coffee, and rice present suitable feedstock for bioconversion
into chemicals, including citric acid by fermentation process,
thereby adding value to what normally constitutes wastes
products (Giese, Dekker,  Barbosa, 2008; Iqbal, Kyazze, 
Keshavarz, 2013). Microorganisms have long played a
major role in the production/development of food industry
(dairy, fish and meat products) and alcoholic beverages
(Buyukkileci, Tari,  Fernandez-Lahore, 2011). There is great
interest in the development and use of natural food and
additives derived from microorganisms, since they are more
desirable than the synthetic ones produced by chemical
processes. For industrial use, citric acid can be produced
from several agricultural based wastes such as apple pomace
and others.
By keeping in mind the current scenario, industrially
relevant demands and biotechnological valorization of
various agro-based waste materials, this study was designed
to obtain a hyper production of an industrially relevant citric
acid. The main objective of this study was to use renewable
and easily abundant agro-based materials under SSF for
enriched citric acid production at optimal level.
2. Materials and methods
2.1. Chemicals and substrates
All chemicals were of analytical grade unless otherwise
specified and used as-received. Various agro-based substrates
such as apple pomace and peanut shells were obtained from
local fruit market, Gujrat, Pakistan. The aforementioned sub-
strates were first washed using hot water and then crushed
into small pieces, dried at 60 
C, ground to 40 mm and finally
stored in an air-tight moisture-free plastic jars for the use of
the whole experiment.
2.2. Pre-treatment of substrates
Moisture-free powdered substrates (20 g), separately, were
pre-treated with 1% HCl in an Erlenmeyer flask (500 mL) at
room temperature (30 
C) for 1 h, afterwards, the substrate
slurry was filtered through four layers of muslin cloth, and
both filtrate and residue were retained. Residues were
washed several times with distilled water to remove extra
acidity prior to being used for protease production and
further analysis.
2.3. Microbial cultures and inoculum development
In the present study, both of the microbial strains i.e., Asper-
gillus ornatus and Alternaria alternata were obtained from the
Department of Biochemistry and Molecular Biology, Univer-
sity of Gujrat, Pakistan, grown on Vogel's agar slants at 35 
C
for 3 days and stored at 4 
C for the whole experiment. To
develop a homogeneous inoculum suspension, a pure colony
of each strain was transferred into 100 mL of Vogel's liquid
medium supplemented with trace elements after sterilizing
the liquid medium at 103 kPa and 121 
C for 15 min. The g/L
ingredients of the trace element solution were: ZnSO4.7H2O,
1.0; CuSO4.5H2O, 0.50; MnSO4.H2O, 0.50 and Na2MoO4.2H2O,
0.50. The inoculated culture was then incubated in a
temperature-controlled shaking incubator at 30 
C for 20 h at
140 rpm for the development of a homogenous inoculum.
2.4. Fermentation protocol
During the initial substrate screening trial, 20 g of each of the
aforementioned substrates was taken in a 500 mL Erlenmeyer
flask, moistened with Vogel's media, and inoculated with the
freshly developed fungal spore suspension of A. ornatus, A.
alternata and a co-culture consortia. All of the inoculated
experimental flasks were incubated at 30 ± 1 
C for 5 days.
After the stipulated fermentation time (24 h), 100 mL of
distilled water was added to the fermented cultures and was
then incubated in a temperature-controlled shaking incubator
at 30 
C for half an hour at 180 rpm. The homogenized media
were then centrifuged at 10,000Â g for 10 min at 4 
C to get
clear supernatant containing product solution; the resultant
clear supernatant was used for analytical studies.
2.5. Determination of biomass
The pellets obtained during the extraction process were re-
suspended in 50 mM phosphate buffer at pH 7.0 and re-
centrifuged at 10,000 Â g for 10 min in pre-weighed falcon
tubes and dried at 80 
C until reaching constant weight and
final biomass weights in grams were recorded.
2.6. Determination of citric acid
Citric acid was analyzed in a reaction mixture containing 1 mL
of culture filtrate and 1.30 mL pyridine using as reported
method of Marier  Boulet, 1958. Briefly, the mixture was
added in the test tube and swirled briskly followed by 5.70 mL
of acetic anhydride addition in each tube. Test tubes were
placed in water bath at 32 ± 0.25 
C for 30 min. The optical
density was measured (405 nm) on a spectrophotometer and
the mg/mL concentration of citric acid was calculated using a
standard curve assay.
J o u r n a l o f R a d i a t i o n R e s e a r c h a n d A p p l i e d S c i e n c e s 9 ( 2 0 1 6 ) 5 7 e6 258
2.7. Optimization of fermentation parameters
To optimize the end product a classical optimization approach
was adopted to study the effect of incubation period
(48e144 h) on the citric acid production capability of the co-
culture consortia in the presence of all three solid sub-
strates. The production of citric acid by co-culture consortia
was carried out at varying pH values ranging from 3 to 7 in
triplicate flasks. This was then followed by incubation the
culture flasks at different temperatures ranging from 20 to
40 
C. SSF media of apple pomace were moistened to varying
moisture levels (50e80% w/w) using Vogel's media. The media
were adjusted to optimum pH, sterilized, inoculated with
freshly prepared inoculum and incubated at optimum tem-
perature under still culture conditions. Effects of varying
concentrations of apple pomace as a potential growth sup-
ported substrate were also investigated. Whereas, previously
optimized parameters including fermentation time, pH, tem-
perature and moisture contents were maintained at their
optimal level. Finally, to further induce the culture various
amino acids including arginine, glycine, glutamine, tyrosine
and aspartic acid were also supplemented additionally to the
optimized fermentation media to investigate their effect on
the citric acid yield.
3. Results and discussion
3.1. Screening of microbial consortia
Fig. 1 illustrates the results obtained during the culture
screening trial. Evidently, Fig. 1 shows the citric acid pro-
ductivity (in terms of mg/mL) as a function of fermentative
organism in shaken flasks. After the stipulated fermentation
period it was observed that the citric acid continued to syn-
thesize by all of the consortia into the medium, additionally
supplemented with apple pomace, peanut shells and a
mixture of both apple pomace and peanut shell with 50:50
ratio as a growth supported substrate, at a significant rate. It
was observed that co-culture of A. ornatus and A. alternata
incubated with apple pomace gave the maximal citric acid
yield. Whereas, other two experimental trials showed
decreasing trend in the biosynthesis of citric acid under the
same environment. The observed phenomenon also in-
dicates the elicitation role of the tested substrate, in addition
to its anchoring advantage in the solid state fermentation
process, in comparison to other used substrates this phe-
nomenon was strongest in case of the fermentation media
supplemented with apple pomace. The time taken by the
culture organism for enzyme synthesis and/or secretion is
dependent on the length of the lag phase and primary
metabolism on a particular substrate, which greatly varies
with the chemical composition and nature of the growth
supported solid substrates as well as on the method of pre-
treatment used. Based on the optimal citric acid produc-
tion, a co-culture consortium was selected as a best yielded
culture for further optimization of the various physi-
ochemical and nutritional factors.
3.2. Optimization of incubation period
To elucidate the effect of different time periods on the pro-
duction of citric acid form a co-culture of A. ornatus and A.
alternata on physiochemically analyzed substrates under SSF,
experiments were conducted at different time periods from 44
to 144 h. Data analyzed showed that during the fermentation
period the citric acid production was reached to its maximum
value (0.447 mg/mL) after 48th h of initial incubation (Fig. 2).
This was then followed by peanut shells based media with a
second highest yield of citric acid i.e., 0.250 mg/mL. Further
increase in fermentation period decreased the citric acid
production. The culture inoculated with mixed substrates
showed the least amount of citric acid under the same
fermentation environment. One possible reason of this
further reduction in the product value could be the age of
fungus, depletion of sugar contents, other inhibitory metab-
olites and decreased available nitrogen in the fermentation
medium. Our data suggests that the optimum growth/
fermentation/incubation time period for enhanced citric acid
yield varies both with culture organism and growth supported
substrates. In an earlier study, Rolfe et al., 2012 had reported
the importance of culture lag phase and its influence on the
product.
Fig. 1 e Initial screening of microbial consortia for
enhanced citric acid production in the presence of different
solid substrates.
Fig. 2 e Optimization of incubation period for enhanced
citric acid production from co-culture of A. ornatus and A.
alternata in the presence of apple pomace.
J o u r n a l o f R a d i a t i o n R e s e a r c h a n d A p p l i e d S c i e n c e s 9 ( 2 0 1 6 ) 5 7 e6 2 59
3.3. Optimization of incubation pH
The effect of varying incubation pH values ranging from 3 to 7
in triplicate flasks on citric acid production by a co-culture was
investigated and maximum yield (0.521 ± 1.4 mg/mL) was
recovered (Fig. 3). However, a decline in the citric acid yield
was observed as the pH level above or below 5. It has been well
document in today literature that pH is one among many
critical parameters for fungal growth, product synthesis under
suitable fermentation conditions, as well as for working of its
enzymes. Previously, a quantitative effect of medium pH on
citric acid production has been reported by Ambati and
Ayyanna (2001). Owing to genetic variability various re-
searchers have reported various pH optimal values for
different culture strains.
3.4. Optimization of incubation temperature
To elucidate the effect of different temperature on the pro-
duction of citric acid, shake flask experiments were run at
various temperature between 20 and 40 
C. Maximum citric
acid yield (0.313 ± 1.8 mg/mL) was observed in batch culture
fermented at 30 
C (Fig. 4). Further increase in temperature
suppressed the citric acid productivity potential of the culture
used. Interestingly a similar kind of decreasing trend in the
citric acid synthesis was recorded at lower and higher tem-
perature range than the optimal level. Likewise pH, temper-
ature is also an important factor that had greater influence on
the end product i.e., citric acid either directly or indirectly. One
possible reason of this behavior is that higher temperature
can cause the denaturation of the working enzyme system of
the culture hence cause further reduction in the product
value.
3.5. Optimization of incubation moisture
Effects of varying incubation moisture of apple pomace as a
potential growth supported substrate was also investigated
and the results obtained are presented in Fig. 5. Fig. 5 revealed
the effect of moisture on the citric acid production potential of
a co-culture of A. ornatus and A. alternate. Evidently, 50%
moisture was found optimal with an enhanced citric acid yield
of 0.361 mg/mL. Above the reported moisture (50%) fermen-
tation media first change its type into semi-solid and then
finally, with further increase in moisture up to 75%, into semi-
liquid and liquid state. It has already been well reported in
literature that SSF is better media for citric acid production
than liquid state fermentation (LSF) or submerged fermenta-
tion (SmF) techniques, because of the lower contamination
chances in the fermentation medium (Javed, Asgher, Sheikh,
Nawaz,  Jamil, 2011). Our data is also in agreement with an
earlier reported phenomenon's with an improved citric acid
production under SSF at 50% moisture. A reduction in the
citric acid biosynthesis was recorded beyond the optimal
(50%) moisture level.
3.6. Optimization of substrate concentrations
The effect of different substrate concentration (5e25 g) on the
production of citric acid by a co-culture of A. ornatus and A.
alternata on physiochemically analyzed substrate under SSF
was investigated and the results obtained are illustrated in
Fig. 6. The maximum citric acid yield (1.143.4 ± 1.1 mg/mL) was
Fig. 3 e Optimization of incubation pH for enhanced citric
acid production from co-culture of A. ornatus and A.
alternata in the presence of apple pomace.
Fig. 4 e Optimization of incubation temperature for
enhanced citric acid production from co-culture of A.
ornatus and A. alternata in the presence of apple pomace.
Fig. 5 e Optimization of moisture contents for enhanced
citric acid production from co-culture of A. ornatus and A.
alternata in the presence of apple pomace.
J o u r n a l o f R a d i a t i o n R e s e a r c h a n d A p p l i e d S c i e n c e s 9 ( 2 0 1 6 ) 5 7 e6 260
observed under optimum (25 g) substrate concentration. After
careful analyzing during the experiment we observed that
under enhanced carbon source concentration, more inducers
available to the fermentative culture that in response enhance
the production of citric acid. During the trial it was observed
that A. ornatus and A. alternata used reducing sugars present in
the filtrate for its functional activity to produce citric acid at
higher titters. Moreover, culture organism achieved
maximum yield of citric acid by hydrolyzing polysaccharides.
3.7. Optimization of amino acids
Maximum citric acid yield (2.644 ± 1.5 mg/mL) was observed
with arginine as a nutritional ingredient (Fig. 7). Optimum
nutritional density is an important consideration for
fermentation process since the accumulation of spores can
inhibit growth and development of the culture organism.
Presently, it was observed that the presence of an optimal
nutritional ingredients has stimulatory effect on the citric acid
production.
4. Conclusion
In conclusion, the present approach should be a superior way-
out for proper bio-utilization of agro-based materials, and
their conversion into useful products. A co-culture of A.
ornatus and A. alternata used in the present study, showed
considerable potential to utilize various agro-based solid
substrates as a cost-effective growth supported media for
citric acid production. An attempt was made towards finding
the best growth conditions for successful cultivation of A.
ornatus and A. alternata, and production level of industrially
relevant citric acid. The further optimization of commercial-
scale production of citric acid using this strain is ongoing in
our lab.
Acknowledgments
The authors are grateful to the Department of Biochemistry
and Molecular Biology from the Faculty of Sciences at the
University of Gujrat (UoG), Gujrat, Pakistan for providing
financial support and laboratory facilities.
r e f e r e n c e s
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Fig. 6 e Optimization of substrate concentration for
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ornatus and A. alternata in the presence of apple pomace.
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production from co-culture of A. ornatus and A. alternata in
the presence of apple pomace.
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SRA. Citric Acid

  • 1. Bio-synthesis of citric acid from single and co-culture-based fermentation technology using agro-wastes Sohaib Rafaqat Ali, Zahid Anwar, Muhammad Irshad* , Saima Mukhtar, Nabeela Tariq Warraich Department of Biochemistry and Molecular Biology, Faculty of Sciences, University of Gujrat, Pakistan a r t i c l e i n f o Article history: Received 18 May 2015 Received in revised form 2 August 2015 Accepted 2 September 2015 Available online 31 October 2015 Keywords: Citric acid SSF Optimization Aspergillus ornatus Alternaria alternata a b s t r a c t Agro-based materials are primarily composed of complex polysaccharides that strengthen microbial growth for the production of industrially relevant value-added products. Therefore, in the present study, solid state fermentation (SSF) was carried out using agro- based waste materials (apple pomace, peanut shell and a mixture of both apple pomace and peanut shell with 50:50 ratio) as carriers/support for SSF to enhance citric acid pro- duction from single and co-culture consortia of Aspergillus ornatus and Alternaria alternata. During initial screening trial it was observed that growth media supplemented with apple pomace under SSF process of co-culture consortia presenting the preeminent 0.46 ± 0.42 mg/mL of citric acid. On partial optimization co-culture showed the maximum citric acid yield (2.644 ± 0.99 mg/mL) in the presence of arginine as a nutritional ingredient at 30 C in an apple pomace based medium at 50% moisture content with pH of 5 and substrate concentration (25 g) after 48th of solid state fermentation. In conclusion, a suitable addition of fermentative substrate to the SSF medium increased fungal growth, sugar utilization and citric acid production when used in lower concentrations. Copyright © 2015, The Egyptian Society of Radiation Sciences and Applications. Production and hosting by Elsevier B.V. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). 1. Introduction Citric acid is one among the most versatile organic acid and broadly used for multipurpose in different industries including food, cosmetics, pharmacy, beverages and many others (Blair and Stall, 1993). Apart from its consumption as a food additive, citric acid is also considered as an indispensable component of various pharmaceuticals, synthetic detergents, cosmetics, and many other value-added products. Sales of citric acid worldwide are divided amongst the principle fields of use including food, confectionery beverages (75%), phar- maceuticals (10%) and other industries (15%). The use of citric acid as a food acidulate depends in part on its strength as an acid. However, its pleasant taste and its property of enhancing existing flavors have ensured its dominant position in market (Kapoor, Choudhry, Tauro, 1982). There is an immense need to investigate the factors responsible for low citric acid yields and to develop strategies to increase yield and reduce pro- duction cost (Milson Meers, 1985). * Corresponding author. Tel.: þ92 344 4931030. E-mail addresses: mirshad.uog@gmail.com, muhammad.irshad@uog.edu.pk (M. Irshad). Peer review under responsibility of The Egyptian Society of Radiation Sciences and Applications. HOSTED BY Available online at www.sciencedirect.com ScienceDirect Journal of Radiation Research and Applied Sciences journal homepage: http://www.elsevier.com/locate/jrras J o u r n a l o f R a d i a t i o n R e s e a r c h a n d A p p l i e d S c i e n c e s 9 ( 2 0 1 6 ) 5 7 e6 2 http://dx.doi.org/10.1016/j.jrras.2015.09.003 1687-8507/Copyright © 2015, The Egyptian Society of Radiation Sciences and Applications. Production and hosting by Elsevier B.V. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
  • 2. A range of various physicochemical and nutritional factors are considered very critical which can ultimately influence the growth of microbial strains and the end product. Moisture content, substrate particle sizes, nutrient sources, incubation temperature, pH and inoculum size are among major factors (Bari, Alam, Muyibi, Jamal, 2009; Bari, Alam, Muyibi, Jamal, Al-Mamun, 2010; Ellaiah, Srinivasulu, Adinarayana, 2004; Lotfy, Ghanem, El-Helow, 2007). So far, the influence of fermentation types including SSF, SmF and LSF and concen- trations of fermentative substrates, sugars, metal ions, and aeration on citric acid production have been studied and re- ported elsewhere (Al-Mahin, Hasan, Khan, Begum, 2008; Bayraktar Mehmetoglu, 2000; Xu, Madrid, R€ohr, Kubicek, 1989). Enormous quantities of agro-based industrial waste ma- terials are generated throughout the world from the pro- cessing of raw agriculture materials (Anwar, Gulfraz, Irshad, 2014; Ghaffar et al., 2014). Thus, agro-based indus- trial residues from the processing of sugarcane, orange, coffee, and rice present suitable feedstock for bioconversion into chemicals, including citric acid by fermentation process, thereby adding value to what normally constitutes wastes products (Giese, Dekker, Barbosa, 2008; Iqbal, Kyazze, Keshavarz, 2013). Microorganisms have long played a major role in the production/development of food industry (dairy, fish and meat products) and alcoholic beverages (Buyukkileci, Tari, Fernandez-Lahore, 2011). There is great interest in the development and use of natural food and additives derived from microorganisms, since they are more desirable than the synthetic ones produced by chemical processes. For industrial use, citric acid can be produced from several agricultural based wastes such as apple pomace and others. By keeping in mind the current scenario, industrially relevant demands and biotechnological valorization of various agro-based waste materials, this study was designed to obtain a hyper production of an industrially relevant citric acid. The main objective of this study was to use renewable and easily abundant agro-based materials under SSF for enriched citric acid production at optimal level. 2. Materials and methods 2.1. Chemicals and substrates All chemicals were of analytical grade unless otherwise specified and used as-received. Various agro-based substrates such as apple pomace and peanut shells were obtained from local fruit market, Gujrat, Pakistan. The aforementioned sub- strates were first washed using hot water and then crushed into small pieces, dried at 60 C, ground to 40 mm and finally stored in an air-tight moisture-free plastic jars for the use of the whole experiment. 2.2. Pre-treatment of substrates Moisture-free powdered substrates (20 g), separately, were pre-treated with 1% HCl in an Erlenmeyer flask (500 mL) at room temperature (30 C) for 1 h, afterwards, the substrate slurry was filtered through four layers of muslin cloth, and both filtrate and residue were retained. Residues were washed several times with distilled water to remove extra acidity prior to being used for protease production and further analysis. 2.3. Microbial cultures and inoculum development In the present study, both of the microbial strains i.e., Asper- gillus ornatus and Alternaria alternata were obtained from the Department of Biochemistry and Molecular Biology, Univer- sity of Gujrat, Pakistan, grown on Vogel's agar slants at 35 C for 3 days and stored at 4 C for the whole experiment. To develop a homogeneous inoculum suspension, a pure colony of each strain was transferred into 100 mL of Vogel's liquid medium supplemented with trace elements after sterilizing the liquid medium at 103 kPa and 121 C for 15 min. The g/L ingredients of the trace element solution were: ZnSO4.7H2O, 1.0; CuSO4.5H2O, 0.50; MnSO4.H2O, 0.50 and Na2MoO4.2H2O, 0.50. The inoculated culture was then incubated in a temperature-controlled shaking incubator at 30 C for 20 h at 140 rpm for the development of a homogenous inoculum. 2.4. Fermentation protocol During the initial substrate screening trial, 20 g of each of the aforementioned substrates was taken in a 500 mL Erlenmeyer flask, moistened with Vogel's media, and inoculated with the freshly developed fungal spore suspension of A. ornatus, A. alternata and a co-culture consortia. All of the inoculated experimental flasks were incubated at 30 ± 1 C for 5 days. After the stipulated fermentation time (24 h), 100 mL of distilled water was added to the fermented cultures and was then incubated in a temperature-controlled shaking incubator at 30 C for half an hour at 180 rpm. The homogenized media were then centrifuged at 10,000Â g for 10 min at 4 C to get clear supernatant containing product solution; the resultant clear supernatant was used for analytical studies. 2.5. Determination of biomass The pellets obtained during the extraction process were re- suspended in 50 mM phosphate buffer at pH 7.0 and re- centrifuged at 10,000 Â g for 10 min in pre-weighed falcon tubes and dried at 80 C until reaching constant weight and final biomass weights in grams were recorded. 2.6. Determination of citric acid Citric acid was analyzed in a reaction mixture containing 1 mL of culture filtrate and 1.30 mL pyridine using as reported method of Marier Boulet, 1958. Briefly, the mixture was added in the test tube and swirled briskly followed by 5.70 mL of acetic anhydride addition in each tube. Test tubes were placed in water bath at 32 ± 0.25 C for 30 min. The optical density was measured (405 nm) on a spectrophotometer and the mg/mL concentration of citric acid was calculated using a standard curve assay. J o u r n a l o f R a d i a t i o n R e s e a r c h a n d A p p l i e d S c i e n c e s 9 ( 2 0 1 6 ) 5 7 e6 258
  • 3. 2.7. Optimization of fermentation parameters To optimize the end product a classical optimization approach was adopted to study the effect of incubation period (48e144 h) on the citric acid production capability of the co- culture consortia in the presence of all three solid sub- strates. The production of citric acid by co-culture consortia was carried out at varying pH values ranging from 3 to 7 in triplicate flasks. This was then followed by incubation the culture flasks at different temperatures ranging from 20 to 40 C. SSF media of apple pomace were moistened to varying moisture levels (50e80% w/w) using Vogel's media. The media were adjusted to optimum pH, sterilized, inoculated with freshly prepared inoculum and incubated at optimum tem- perature under still culture conditions. Effects of varying concentrations of apple pomace as a potential growth sup- ported substrate were also investigated. Whereas, previously optimized parameters including fermentation time, pH, tem- perature and moisture contents were maintained at their optimal level. Finally, to further induce the culture various amino acids including arginine, glycine, glutamine, tyrosine and aspartic acid were also supplemented additionally to the optimized fermentation media to investigate their effect on the citric acid yield. 3. Results and discussion 3.1. Screening of microbial consortia Fig. 1 illustrates the results obtained during the culture screening trial. Evidently, Fig. 1 shows the citric acid pro- ductivity (in terms of mg/mL) as a function of fermentative organism in shaken flasks. After the stipulated fermentation period it was observed that the citric acid continued to syn- thesize by all of the consortia into the medium, additionally supplemented with apple pomace, peanut shells and a mixture of both apple pomace and peanut shell with 50:50 ratio as a growth supported substrate, at a significant rate. It was observed that co-culture of A. ornatus and A. alternata incubated with apple pomace gave the maximal citric acid yield. Whereas, other two experimental trials showed decreasing trend in the biosynthesis of citric acid under the same environment. The observed phenomenon also in- dicates the elicitation role of the tested substrate, in addition to its anchoring advantage in the solid state fermentation process, in comparison to other used substrates this phe- nomenon was strongest in case of the fermentation media supplemented with apple pomace. The time taken by the culture organism for enzyme synthesis and/or secretion is dependent on the length of the lag phase and primary metabolism on a particular substrate, which greatly varies with the chemical composition and nature of the growth supported solid substrates as well as on the method of pre- treatment used. Based on the optimal citric acid produc- tion, a co-culture consortium was selected as a best yielded culture for further optimization of the various physi- ochemical and nutritional factors. 3.2. Optimization of incubation period To elucidate the effect of different time periods on the pro- duction of citric acid form a co-culture of A. ornatus and A. alternata on physiochemically analyzed substrates under SSF, experiments were conducted at different time periods from 44 to 144 h. Data analyzed showed that during the fermentation period the citric acid production was reached to its maximum value (0.447 mg/mL) after 48th h of initial incubation (Fig. 2). This was then followed by peanut shells based media with a second highest yield of citric acid i.e., 0.250 mg/mL. Further increase in fermentation period decreased the citric acid production. The culture inoculated with mixed substrates showed the least amount of citric acid under the same fermentation environment. One possible reason of this further reduction in the product value could be the age of fungus, depletion of sugar contents, other inhibitory metab- olites and decreased available nitrogen in the fermentation medium. Our data suggests that the optimum growth/ fermentation/incubation time period for enhanced citric acid yield varies both with culture organism and growth supported substrates. In an earlier study, Rolfe et al., 2012 had reported the importance of culture lag phase and its influence on the product. Fig. 1 e Initial screening of microbial consortia for enhanced citric acid production in the presence of different solid substrates. Fig. 2 e Optimization of incubation period for enhanced citric acid production from co-culture of A. ornatus and A. alternata in the presence of apple pomace. J o u r n a l o f R a d i a t i o n R e s e a r c h a n d A p p l i e d S c i e n c e s 9 ( 2 0 1 6 ) 5 7 e6 2 59
  • 4. 3.3. Optimization of incubation pH The effect of varying incubation pH values ranging from 3 to 7 in triplicate flasks on citric acid production by a co-culture was investigated and maximum yield (0.521 ± 1.4 mg/mL) was recovered (Fig. 3). However, a decline in the citric acid yield was observed as the pH level above or below 5. It has been well document in today literature that pH is one among many critical parameters for fungal growth, product synthesis under suitable fermentation conditions, as well as for working of its enzymes. Previously, a quantitative effect of medium pH on citric acid production has been reported by Ambati and Ayyanna (2001). Owing to genetic variability various re- searchers have reported various pH optimal values for different culture strains. 3.4. Optimization of incubation temperature To elucidate the effect of different temperature on the pro- duction of citric acid, shake flask experiments were run at various temperature between 20 and 40 C. Maximum citric acid yield (0.313 ± 1.8 mg/mL) was observed in batch culture fermented at 30 C (Fig. 4). Further increase in temperature suppressed the citric acid productivity potential of the culture used. Interestingly a similar kind of decreasing trend in the citric acid synthesis was recorded at lower and higher tem- perature range than the optimal level. Likewise pH, temper- ature is also an important factor that had greater influence on the end product i.e., citric acid either directly or indirectly. One possible reason of this behavior is that higher temperature can cause the denaturation of the working enzyme system of the culture hence cause further reduction in the product value. 3.5. Optimization of incubation moisture Effects of varying incubation moisture of apple pomace as a potential growth supported substrate was also investigated and the results obtained are presented in Fig. 5. Fig. 5 revealed the effect of moisture on the citric acid production potential of a co-culture of A. ornatus and A. alternate. Evidently, 50% moisture was found optimal with an enhanced citric acid yield of 0.361 mg/mL. Above the reported moisture (50%) fermen- tation media first change its type into semi-solid and then finally, with further increase in moisture up to 75%, into semi- liquid and liquid state. It has already been well reported in literature that SSF is better media for citric acid production than liquid state fermentation (LSF) or submerged fermenta- tion (SmF) techniques, because of the lower contamination chances in the fermentation medium (Javed, Asgher, Sheikh, Nawaz, Jamil, 2011). Our data is also in agreement with an earlier reported phenomenon's with an improved citric acid production under SSF at 50% moisture. A reduction in the citric acid biosynthesis was recorded beyond the optimal (50%) moisture level. 3.6. Optimization of substrate concentrations The effect of different substrate concentration (5e25 g) on the production of citric acid by a co-culture of A. ornatus and A. alternata on physiochemically analyzed substrate under SSF was investigated and the results obtained are illustrated in Fig. 6. The maximum citric acid yield (1.143.4 ± 1.1 mg/mL) was Fig. 3 e Optimization of incubation pH for enhanced citric acid production from co-culture of A. ornatus and A. alternata in the presence of apple pomace. Fig. 4 e Optimization of incubation temperature for enhanced citric acid production from co-culture of A. ornatus and A. alternata in the presence of apple pomace. Fig. 5 e Optimization of moisture contents for enhanced citric acid production from co-culture of A. ornatus and A. alternata in the presence of apple pomace. J o u r n a l o f R a d i a t i o n R e s e a r c h a n d A p p l i e d S c i e n c e s 9 ( 2 0 1 6 ) 5 7 e6 260
  • 5. observed under optimum (25 g) substrate concentration. After careful analyzing during the experiment we observed that under enhanced carbon source concentration, more inducers available to the fermentative culture that in response enhance the production of citric acid. During the trial it was observed that A. ornatus and A. alternata used reducing sugars present in the filtrate for its functional activity to produce citric acid at higher titters. Moreover, culture organism achieved maximum yield of citric acid by hydrolyzing polysaccharides. 3.7. Optimization of amino acids Maximum citric acid yield (2.644 ± 1.5 mg/mL) was observed with arginine as a nutritional ingredient (Fig. 7). Optimum nutritional density is an important consideration for fermentation process since the accumulation of spores can inhibit growth and development of the culture organism. Presently, it was observed that the presence of an optimal nutritional ingredients has stimulatory effect on the citric acid production. 4. Conclusion In conclusion, the present approach should be a superior way- out for proper bio-utilization of agro-based materials, and their conversion into useful products. A co-culture of A. ornatus and A. alternata used in the present study, showed considerable potential to utilize various agro-based solid substrates as a cost-effective growth supported media for citric acid production. An attempt was made towards finding the best growth conditions for successful cultivation of A. ornatus and A. alternata, and production level of industrially relevant citric acid. The further optimization of commercial- scale production of citric acid using this strain is ongoing in our lab. Acknowledgments The authors are grateful to the Department of Biochemistry and Molecular Biology from the Faculty of Sciences at the University of Gujrat (UoG), Gujrat, Pakistan for providing financial support and laboratory facilities. r e f e r e n c e s Al-Mahin, A., Hasan, S. M., Khan, M. H., Begum, R. (2008). Citric acid production by Aspergillus niger through solid-state fermentation on sugarcane bagasse. Bangladesh Journal of Microbiology, 25(1), 9e12. Ambati, P., Ayyanna, C. (2001). Optimizing medium constituents and fermentation conditions for citric acid production from palmyra jaggery using response surface method. World Journal of Microbiology and Biotechnology, 17(4), 331e335. Anwar, Z., Gulfraz, M., Irshad, M. (2014). Agro-industrial lignocellulosic biomass a key to unlock the future bio-energy: a brief review. Journal of Radiation Research and Applied Sciences, 7(2), 163e173. Bari, M. N., Alam, M. Z., Muyibi, S. A., Jamal, P. (2009). Improvement of production of citric acid from oil palm empty fruit bunches: optimization of media by statistical experimental designs. Bioresource Technology, 100(12), 3113e3120. Bari, N., Alam, Z., Muyibi, S. A., Jamal, P., Al-Mamun, A. (2010). Statistical optimization of process parameters for the production of citric acid from oil palm empty fruit bunches. African Journal of Biotechnology, 9(4), 554e563. Bayraktar, E., Mehmetoglu, U¨ . (2000). Production of citric acid using immobilized conidia of Aspergillus niger. Applied Biochemistry and Biotechnology, 87(2), 117e125. Blair, G., Stall, P. (Eds.). Kirk-Othmer encyclopedia of chemical technology (3rd ed., Vol. 6, p. 354). New York: Wiley. Buyukkileci, A. O., Tari, C., Fernandez-Lahore, M. (2011). Enhanced production of exo-polygalacturonase from agro- based products by Aspergillus sojae. BioResources, 6(3), 3452e3468. Ellaiah, P., Srinivasulu, B., Adinarayana, K. (2004). Optimisation studies on neomycin production by a mutant strain of Streptomyces marinensis in solid state fermentation. Process Biochemistry, 39(5), 529e534. Fig. 6 e Optimization of substrate concentration for enhanced citric acid production from co-culture of A. ornatus and A. alternata in the presence of apple pomace. Fig. 7 e Optimization of amino acid for enhanced citric acid production from co-culture of A. ornatus and A. alternata in the presence of apple pomace. J o u r n a l o f R a d i a t i o n R e s e a r c h a n d A p p l i e d S c i e n c e s 9 ( 2 0 1 6 ) 5 7 e6 2 61
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