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Rakesh Pokhrel
M.Sc. Clinical Biochemistr
First Year
COLLAGEN
Overview
 INTRODUCTION
 STRUCTURE
 TYPES
 BIOSYNTHESIS
 DISORDERS
 Evidence of regular structure was presented in 1930’s.
 Ramachandrn, concentrated on the conformation of the
collagen monomer .
 Dealing with the confirmation of each polypeptide chain gave the
triple helix “Madras” model.
 Madras model is the most widely accepted model which gave the
quaternary structure of collagen
History:
INTRODUCTION
 Collagen is a type of fibrous protein
 Shares the common features of fibrous proteins like :
- Polypeptide chains organized approximately parallel along a
single axis
- Insoluble in water and dilute salt solution.
- Gives strength and flexibility to the structure.
 Other examples
Elastin
Keratin.
 Most abundant protein in human body
 Makes 25% to 35% of whole body protein content.
 Comes from Greek word “kolla” meaning “Glue producer”
 Long rigid structure with three polypeptide chains
 Forms rope like triple structure.
 Present in tendons, ligaments, skin, cornea, cartilage, bone,
blood vessels, gut, intervertebral disc.
 Variation in amino acid sequence defines properties
STRUCTURE
 Tropocollagen is a basic structural unit
 Consist of 3 polypeptide chains (α- chains) having about 1000
residues in each chain.
 Each α- chain is left handed
 Approximately 3 amino acid residue per turn.
 300 nm long; 1.5 nm diameter.
 Each of the 3 polypeptide chains are held in a helical
conformation by winding around each other.
 3 left-handed chains are super twisted about each other to
form a right-handed triple helix.
 Opposite direction of coiling resists unwinding.
 Super coils are stabilized by H- bonding between
individual polypeptide chain.
The hierarchical design of collagen.
Amino acid sequence:
 Amino acid sequence in collagen is unique.
 Glycine occupies every third position.
 Repetitive amino acid sequence may be represented
as Gly–X–Y, where X is frequently Proline and Y is
hydroxyproline or hydroxylysine.
• Proline facilitates the formation of the helical
conformation of each α-chain because its ring structure
causes "kinks“ in the peptide chain .
• Glysine fits into the restricted spaces where the three
chains of the helix come together.• Hydroxyproline occurs once in
about 10 amino acid residue.
• Hydroxylysine occurs once in
200 amino acid residue.
Hydoxyproline and
Hydroxylysine:
 Residues result from hydroxylation of some of proline and
lysine residues.
 Hydroxylation of proline gives hydroxyproline
 Hydroxylation of lysine gives hydroxylysine.
 These residues are rarely present in other proteins.
 These are Post -translational modification
 Hydroxyproline maximize H bond formation so increase
stabilization of triple helix.
Triple helix structure:
 Tertiary structure of collagen.
 Three helical polypeptide chains linked with each other by
H- bond to form triple helix.
 Might be homotrimer or heterotrimer
 Amino acid present on surface of the helical molecules
Types of collagen:
 More than 20 collagen types
 Variations in the amino acid sequence of the α-
chains creates the differences
 These α-chains are combined to form the various
types of collagen found in the tissues
 For example:
The most common collagen , type I contains two
chains called alpha 1 and one chain called alpha 2
Whereas type II collagen contains three alpha 1
chains
The collagens can be organized into two groups
1. Fibrilar:
 Type I, II, III , V ,VI
 Rope like structure
 Banding pattern in EM
 It reflects the regular staggered packing of the
individual collagen molecules.
 Type I: Tendon, Cornea
 Type II: Cartilage
 Type III: Blood vessels
2.Non-fibrillar
 FACIT (Fibril Associated Collagens with Interrupted Triple
Helices) (Type IX, XII, XIV, XIX, XXI)
 Short chain (Type VIII, X)
 Basement membrane (Type IV)
 Multiplexin (Multiple Triple Helix domains with Interruptions)
(Type XV, XVIII)
 MACIT (Membrane Associated Collagens with Interrupted
Triple Helices) (Type XIII, XVII)
 Other (Type VI, VII)
Biosynthesis:
 Polypeptide precursors of the collagen molecule are
formed in fibroblasts, osteoblasts, chondroblast
 Secreted into the extracellular matrix
 Enzymatic modification takes place forming the
mature collagen monomers
 Aggregate and cross-linked to form collagen fibrils
Steps in biosynthesis:
 Transcription of mRNA
 Pre- Pro peptide Formation
 Pre –Pro peptide to procollagen
 Golgi Apparatus modification
 Formation of tropocollagen
 Formation of collagen fibril
Pre–Pro Peptide Formation
• About 34 genes are associated for coding specific mRNA
sequence.
• mRNA then exits from nucleus, enters cytoplasm.
• Then it links with ribosomal subunit for translation.
• Translation produce Pre pro peptide or pre pro alpha chain.
• N terminal of this peptide has special amino acid sequence
called signal sequence
• This is recognized by the a signal recognition particle in
endoplasmic reticulum.
• Directs the peptide to ER.
Formation Of Procollagen
Three modifications of the pre-pro-peptide occur leading to the
formation of the alpha peptide:
 The signal peptide on the N-terminal is dissolved, and the molecule
is now known as propeptide (not procollagen).
 Hydroxylation of lysines and by the enzymes 'prolyl hydroxylase'
and 'lysyl hydroxylase'
 Glycosylation occurs by adding either glucose or galactose
monomers onto the hydroxyl groups that were placed onto lysines,
but not on prolines.
 Three of the hydroxylated and glycosylated propeptides twist into a
triple helix forming procollagen. Procollagen still has unwound
ends, which will be later trimmed.
Hydroxylation:
 Proline and lysine residues found in the Y-position of the Gly-
X-Y- sequence can be hydroxylated to form hydroxyproline
and hydroxylysine residues.
 Hydroxyproline stabilize the triple helix.
 Hydroxylysine permits cross linking of helices to form fibres.
 Hydroxylation is enzymatic reaction with ascorbic acid as co-
factor.
 Ascorbate or ascorbic acid increase synthesis of collagen by
8 folds. (Murad et.al).
Glycosylation:
 The hydroxyl group of the hydroxylysine residues of
collagen may be enzymatically glycosylated.
 Glucose and Galactose are attached to polypeptide
chains
 This addition results in twisting of the chain.
Golgi Apparatus Modification :
 Three helical pro-α-chains assemble.
 Forms Pro–collagen with twisted portion at center and loose
ends on either sides.
 The Pro-collagen molecules are then translocated to the Golgi
apparatus, where they are attached to oligosaccharides and
packaged in secretory vesicles.
 The vesicles fuse with the cell membrane, causing the release
of Pro-collagen molecules into the extracellular space.
Formation of Tropocollagen
• The procollagen molecules then are cleaved by N- and C-
pro-collagen peptidases, which remove the terminal
propeptides, releasing triple-helical molecules.
• This molecule is termed as tropocollagen.
• Absent when synthesizing the type III (Fibrillar collagen )
Formation of collagen fibrils:
 Individual collagen molecules spontaneously associate to form
fibrils.
 They form an ordered, overlapping, parallel array, with
adjacent collagen molecules arranged in a staggered pattern,
each overlapping its neighbour by a length approximately
three-quarters of a molecule.
 Called “ Quarter staggered arrangement’’
Cross-link formation:
• The fibrillar array of collagen molecules serves as a substrate
for lysyl oxidase.
• This extracellular enzyme oxidatively deaminates some of the
lysyl and hydroxylysyl residues in collagen.
• The reactive aldehydes that result (allysine and
hydroxyallysine) can condense with lysyl or hydroxylysyl
residues in neighboring collagen molecules to form covalent
cross-links .
 The cross-linking is essential for achieving the tensile strength
necessary for proper functioning of the connective tissue.
Degradation of collagen
 Highly stable; t1/2 several months
 Remodeled in response to growth or tissue injury
 Breakdown depends on proteolytic action of collagenase
 The organism Clostridium histolyticum conatins the
enzyme collagenase
 Cleave collagen fibres into smaller fragments that can be
phagocytosed and further degraded by lysosomal
enzymes to their constituent amino acids.
Mediators of collagen synthesis:
Increase synthesis:
 Platelate derived Growth Factor
 Transforming Growth Factor-β
 Fibroblast Growth Factor
 Insulin like Growth Factor
Decrease synthesis:
 Cytokinins
 ILs
 IFN-γ
 TNF-α
 Glucocorticoids
 PGE2
Medical importance:
 Cosmetic surgery.
 Bone grafting
 Construction of artificial skin substitutes
 Hemostatic properties
Collagen Abnormalities:
Can be due to:
 Defect in expression of collagen gene.
 Molecular defect in processing/synthesis
 Defect in structure of collagen
Scurvy
 Resulting from Vitmin C deficiency
 Presented as malaise , lethargy , spongy gums ,
bleeding from the mucous membranes
 The reaction affected is the hydrxylation of proline
and lysine
 InterchaingH bond formation impaired
 Capillary fragility leads to sub cutaneous
extravasations of blood
Osteogenesis imperfecta:
• Also known as brittle bone syndrome
• Heterogenous group of inherited disorders.
• Mutation in COL1A1 and COL1A2
• Replacement of single Glycine residue by
bulkier amino acid in Type I collagen.
• Symptoms depends on types
• Blue sclera, loss of hearing, retarded wound
healing and a rotated and twisted spine leading
to "humped-back" appearance are common
features
 Pathophysiology based on the steric hindrance created
by the bulge produced due to bulkier amino acids
 There are around 8 types of OI but type 1 is more
common
 Type I- Present in early infancy with features
secondary to trauma
 Type II-More severe , pulmonary hypoplasia in utero
or during the neonate
Ehlers-Danlos Syndrome (EDS):
 Inherited connective tissue disorder.
 Result from a deficiency of collagen-processing enzymes
(e.g, lysyl oxidase or pro-collagen peptidase), or from
mutations in the amino acid sequences of collagen.
 Mutation in genes COL1A1, COL1A2, COL3A1,
COL5A1, COL5A2
 Alters the structure, production or processing of
collagen.
Signs and symptoms:
 Hyper flexibility of joints
 Unstable joints
 Osteopenia
 Stretching and fragile skin
 Easy bruising and poor wound healing
 Cardiovascular disorders
Valvular disease
Aneurysm
 Some of the lysyl side chains of the tropoelastin
polypeptides are oxidatively deaminated by lysyl
oxidase, forming allysine residues.
 Three of the allysyl side chains plus one unaltered lysyl
side chain from the same or neighboring polypeptides
form a desmosine cross-link .
 This produces elastin- an extensively interconnected,
rubbery network that can stretch and bend in any direction
when stressed, giving connective tissue elasticity.
 Nicolos Paganini Italian violinist had EDS
 This rare syndrome helped him play the violin
extraordinarily
 The India rubber man , elastic lady are
other personalities described in history having
EDS
Alport Syndrome
 Is the designation applied to a number of genetic
disorders (both X-linked and autosomal) affecting the
structure of type IV collagen fibers
 The presenting sign is hematuria, and patients may
eventually develop end-stage renal disease
 Characteristic abnormalities of the structure of the
basement membrane and lamina
Epidermolysis Bullosa
 Mutations in COL7A1
 Presented as skin breaks and blisters as a result
of minor trauma
 VII collagen is responsible for anchoring the basal
lamina to collagen fibril in dermis
 Anchoring fibrils are reduced
Alport Syndrome
Collagen Supplements
Cosmetics and Collagen
 Fish collagen peptides are used extensively
 The products claims to increase in the total collagen in
body
 To improve skin elasticity , smoothness and moisture
 Some articles have proved to reduce the wrinkles by
wrinkle replica analysis ( Bourmand et al )
References:
 Lehninger-Principles of Biochemistry 5th edition.
 Lippincott’s Biochemistry 4th edition.
 Harper’s Illustrated Biochemistry 26th edition.
 Harrison’s Principle of Internal Medicine 17th edition.
 www.authorstream.com
 Balasubramanian, D . (October 2001). "GNR — A Tribute". Resonance.
Indian Academy of Sciences. 6 (10). Archived from the original on 2014-
01-10.
 Beighton, P. (1970) The Ehlers-Danlos Syndrome. William Heinemann
Medical Books Ltd, pp. 1–194. Beighton, P. (1993) The Ehlers-Danlos
syndrome. In: Mckusi
 Borumand M, Sibilla S. Effects of a nutritional
supplement containing collagen peptides on skin
elasticity, hydration and wrinkles. J Med Nutr Nutraceut
2015;4:47-53
THANK
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Collagen

  • 1. Rakesh Pokhrel M.Sc. Clinical Biochemistr First Year COLLAGEN
  • 2. Overview  INTRODUCTION  STRUCTURE  TYPES  BIOSYNTHESIS  DISORDERS
  • 3.  Evidence of regular structure was presented in 1930’s.  Ramachandrn, concentrated on the conformation of the collagen monomer .  Dealing with the confirmation of each polypeptide chain gave the triple helix “Madras” model.  Madras model is the most widely accepted model which gave the quaternary structure of collagen History:
  • 4. INTRODUCTION  Collagen is a type of fibrous protein  Shares the common features of fibrous proteins like : - Polypeptide chains organized approximately parallel along a single axis - Insoluble in water and dilute salt solution. - Gives strength and flexibility to the structure.  Other examples Elastin Keratin.
  • 5.  Most abundant protein in human body  Makes 25% to 35% of whole body protein content.  Comes from Greek word “kolla” meaning “Glue producer”  Long rigid structure with three polypeptide chains  Forms rope like triple structure.  Present in tendons, ligaments, skin, cornea, cartilage, bone, blood vessels, gut, intervertebral disc.  Variation in amino acid sequence defines properties
  • 6. STRUCTURE  Tropocollagen is a basic structural unit  Consist of 3 polypeptide chains (α- chains) having about 1000 residues in each chain.  Each α- chain is left handed  Approximately 3 amino acid residue per turn.  300 nm long; 1.5 nm diameter.  Each of the 3 polypeptide chains are held in a helical conformation by winding around each other.
  • 7.  3 left-handed chains are super twisted about each other to form a right-handed triple helix.  Opposite direction of coiling resists unwinding.  Super coils are stabilized by H- bonding between individual polypeptide chain.
  • 8. The hierarchical design of collagen.
  • 9. Amino acid sequence:  Amino acid sequence in collagen is unique.  Glycine occupies every third position.  Repetitive amino acid sequence may be represented as Gly–X–Y, where X is frequently Proline and Y is hydroxyproline or hydroxylysine.
  • 10. • Proline facilitates the formation of the helical conformation of each α-chain because its ring structure causes "kinks“ in the peptide chain . • Glysine fits into the restricted spaces where the three chains of the helix come together.• Hydroxyproline occurs once in about 10 amino acid residue. • Hydroxylysine occurs once in 200 amino acid residue.
  • 11. Hydoxyproline and Hydroxylysine:  Residues result from hydroxylation of some of proline and lysine residues.  Hydroxylation of proline gives hydroxyproline  Hydroxylation of lysine gives hydroxylysine.  These residues are rarely present in other proteins.  These are Post -translational modification  Hydroxyproline maximize H bond formation so increase stabilization of triple helix.
  • 12. Triple helix structure:  Tertiary structure of collagen.  Three helical polypeptide chains linked with each other by H- bond to form triple helix.  Might be homotrimer or heterotrimer  Amino acid present on surface of the helical molecules
  • 13.
  • 14. Types of collagen:  More than 20 collagen types  Variations in the amino acid sequence of the α- chains creates the differences  These α-chains are combined to form the various types of collagen found in the tissues  For example: The most common collagen , type I contains two chains called alpha 1 and one chain called alpha 2 Whereas type II collagen contains three alpha 1 chains
  • 15. The collagens can be organized into two groups 1. Fibrilar:  Type I, II, III , V ,VI  Rope like structure  Banding pattern in EM  It reflects the regular staggered packing of the individual collagen molecules.  Type I: Tendon, Cornea  Type II: Cartilage  Type III: Blood vessels
  • 16. 2.Non-fibrillar  FACIT (Fibril Associated Collagens with Interrupted Triple Helices) (Type IX, XII, XIV, XIX, XXI)  Short chain (Type VIII, X)  Basement membrane (Type IV)  Multiplexin (Multiple Triple Helix domains with Interruptions) (Type XV, XVIII)  MACIT (Membrane Associated Collagens with Interrupted Triple Helices) (Type XIII, XVII)  Other (Type VI, VII)
  • 17.
  • 18.
  • 19. Biosynthesis:  Polypeptide precursors of the collagen molecule are formed in fibroblasts, osteoblasts, chondroblast  Secreted into the extracellular matrix  Enzymatic modification takes place forming the mature collagen monomers  Aggregate and cross-linked to form collagen fibrils
  • 20. Steps in biosynthesis:  Transcription of mRNA  Pre- Pro peptide Formation  Pre –Pro peptide to procollagen  Golgi Apparatus modification  Formation of tropocollagen  Formation of collagen fibril
  • 21. Pre–Pro Peptide Formation • About 34 genes are associated for coding specific mRNA sequence. • mRNA then exits from nucleus, enters cytoplasm. • Then it links with ribosomal subunit for translation. • Translation produce Pre pro peptide or pre pro alpha chain. • N terminal of this peptide has special amino acid sequence called signal sequence • This is recognized by the a signal recognition particle in endoplasmic reticulum. • Directs the peptide to ER.
  • 22. Formation Of Procollagen Three modifications of the pre-pro-peptide occur leading to the formation of the alpha peptide:  The signal peptide on the N-terminal is dissolved, and the molecule is now known as propeptide (not procollagen).  Hydroxylation of lysines and by the enzymes 'prolyl hydroxylase' and 'lysyl hydroxylase'  Glycosylation occurs by adding either glucose or galactose monomers onto the hydroxyl groups that were placed onto lysines, but not on prolines.  Three of the hydroxylated and glycosylated propeptides twist into a triple helix forming procollagen. Procollagen still has unwound ends, which will be later trimmed.
  • 23. Hydroxylation:  Proline and lysine residues found in the Y-position of the Gly- X-Y- sequence can be hydroxylated to form hydroxyproline and hydroxylysine residues.  Hydroxyproline stabilize the triple helix.  Hydroxylysine permits cross linking of helices to form fibres.  Hydroxylation is enzymatic reaction with ascorbic acid as co- factor.  Ascorbate or ascorbic acid increase synthesis of collagen by 8 folds. (Murad et.al).
  • 24. Glycosylation:  The hydroxyl group of the hydroxylysine residues of collagen may be enzymatically glycosylated.  Glucose and Galactose are attached to polypeptide chains  This addition results in twisting of the chain.
  • 25. Golgi Apparatus Modification :  Three helical pro-α-chains assemble.  Forms Pro–collagen with twisted portion at center and loose ends on either sides.  The Pro-collagen molecules are then translocated to the Golgi apparatus, where they are attached to oligosaccharides and packaged in secretory vesicles.  The vesicles fuse with the cell membrane, causing the release of Pro-collagen molecules into the extracellular space.
  • 26. Formation of Tropocollagen • The procollagen molecules then are cleaved by N- and C- pro-collagen peptidases, which remove the terminal propeptides, releasing triple-helical molecules. • This molecule is termed as tropocollagen. • Absent when synthesizing the type III (Fibrillar collagen )
  • 27.
  • 28. Formation of collagen fibrils:  Individual collagen molecules spontaneously associate to form fibrils.  They form an ordered, overlapping, parallel array, with adjacent collagen molecules arranged in a staggered pattern, each overlapping its neighbour by a length approximately three-quarters of a molecule.  Called “ Quarter staggered arrangement’’
  • 29. Cross-link formation: • The fibrillar array of collagen molecules serves as a substrate for lysyl oxidase. • This extracellular enzyme oxidatively deaminates some of the lysyl and hydroxylysyl residues in collagen. • The reactive aldehydes that result (allysine and hydroxyallysine) can condense with lysyl or hydroxylysyl residues in neighboring collagen molecules to form covalent cross-links .  The cross-linking is essential for achieving the tensile strength necessary for proper functioning of the connective tissue.
  • 30.
  • 31.
  • 32. Degradation of collagen  Highly stable; t1/2 several months  Remodeled in response to growth or tissue injury  Breakdown depends on proteolytic action of collagenase  The organism Clostridium histolyticum conatins the enzyme collagenase  Cleave collagen fibres into smaller fragments that can be phagocytosed and further degraded by lysosomal enzymes to their constituent amino acids.
  • 33. Mediators of collagen synthesis: Increase synthesis:  Platelate derived Growth Factor  Transforming Growth Factor-β  Fibroblast Growth Factor  Insulin like Growth Factor Decrease synthesis:  Cytokinins  ILs  IFN-γ  TNF-α  Glucocorticoids  PGE2
  • 34. Medical importance:  Cosmetic surgery.  Bone grafting  Construction of artificial skin substitutes  Hemostatic properties
  • 35. Collagen Abnormalities: Can be due to:  Defect in expression of collagen gene.  Molecular defect in processing/synthesis  Defect in structure of collagen
  • 36. Scurvy  Resulting from Vitmin C deficiency  Presented as malaise , lethargy , spongy gums , bleeding from the mucous membranes  The reaction affected is the hydrxylation of proline and lysine  InterchaingH bond formation impaired  Capillary fragility leads to sub cutaneous extravasations of blood
  • 37. Osteogenesis imperfecta: • Also known as brittle bone syndrome • Heterogenous group of inherited disorders. • Mutation in COL1A1 and COL1A2 • Replacement of single Glycine residue by bulkier amino acid in Type I collagen. • Symptoms depends on types • Blue sclera, loss of hearing, retarded wound healing and a rotated and twisted spine leading to "humped-back" appearance are common features
  • 38.  Pathophysiology based on the steric hindrance created by the bulge produced due to bulkier amino acids  There are around 8 types of OI but type 1 is more common  Type I- Present in early infancy with features secondary to trauma  Type II-More severe , pulmonary hypoplasia in utero or during the neonate
  • 39. Ehlers-Danlos Syndrome (EDS):  Inherited connective tissue disorder.  Result from a deficiency of collagen-processing enzymes (e.g, lysyl oxidase or pro-collagen peptidase), or from mutations in the amino acid sequences of collagen.  Mutation in genes COL1A1, COL1A2, COL3A1, COL5A1, COL5A2  Alters the structure, production or processing of collagen.
  • 40. Signs and symptoms:  Hyper flexibility of joints  Unstable joints  Osteopenia  Stretching and fragile skin  Easy bruising and poor wound healing  Cardiovascular disorders Valvular disease Aneurysm
  • 41.  Some of the lysyl side chains of the tropoelastin polypeptides are oxidatively deaminated by lysyl oxidase, forming allysine residues.  Three of the allysyl side chains plus one unaltered lysyl side chain from the same or neighboring polypeptides form a desmosine cross-link .  This produces elastin- an extensively interconnected, rubbery network that can stretch and bend in any direction when stressed, giving connective tissue elasticity.
  • 42.  Nicolos Paganini Italian violinist had EDS  This rare syndrome helped him play the violin extraordinarily  The India rubber man , elastic lady are other personalities described in history having EDS
  • 43. Alport Syndrome  Is the designation applied to a number of genetic disorders (both X-linked and autosomal) affecting the structure of type IV collagen fibers  The presenting sign is hematuria, and patients may eventually develop end-stage renal disease  Characteristic abnormalities of the structure of the basement membrane and lamina
  • 44. Epidermolysis Bullosa  Mutations in COL7A1  Presented as skin breaks and blisters as a result of minor trauma  VII collagen is responsible for anchoring the basal lamina to collagen fibril in dermis  Anchoring fibrils are reduced
  • 46.
  • 48. Cosmetics and Collagen  Fish collagen peptides are used extensively  The products claims to increase in the total collagen in body  To improve skin elasticity , smoothness and moisture  Some articles have proved to reduce the wrinkles by wrinkle replica analysis ( Bourmand et al )
  • 49. References:  Lehninger-Principles of Biochemistry 5th edition.  Lippincott’s Biochemistry 4th edition.  Harper’s Illustrated Biochemistry 26th edition.  Harrison’s Principle of Internal Medicine 17th edition.  www.authorstream.com  Balasubramanian, D . (October 2001). "GNR — A Tribute". Resonance. Indian Academy of Sciences. 6 (10). Archived from the original on 2014- 01-10.  Beighton, P. (1970) The Ehlers-Danlos Syndrome. William Heinemann Medical Books Ltd, pp. 1–194. Beighton, P. (1993) The Ehlers-Danlos syndrome. In: Mckusi  Borumand M, Sibilla S. Effects of a nutritional supplement containing collagen peptides on skin elasticity, hydration and wrinkles. J Med Nutr Nutraceut 2015;4:47-53