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The CIARD (Coherence in Information for Agricultural Research for development) initiative and a global infrastructure for linked open data Dr. Johannes Keizer Office ofKnowledge Exchange, Research and Extension Food andAgricultureOrganizationofthe UN Talk atWorldbank,  2011, May 17
We will promote research for food and agriculture, including research to adapt to, and mitigate climate change, and access to research results and technologies at national, regional and international levels.  We will reinvigorate national research systems and will share information and best practices.  We will improve access to knowledge. worldfoodsummit  2009
FAO has been engaged for decades in making agricultural development information more easily accessible and sharable among it's stakeholders.  These efforts reach back to the early 70s when FAO set up the AGRIS program.  Since the advent of the Internet the AIMS team at FAO HQ is working to make distributed data and information repositories interoperable. This work has been backed up on the institutional level by the CIARD  (Coherence in Information for Agricultural Research for Development) initiative, in which FAO, GFAR, the CGIAR and many national partners collaborate. Technically FAO has underpinned this with the further development of the Agricultural Thesaurus AGROVOC and with initiatives on shared metadata sets (AGRIS AP) and ontologies. The paradigm and technology of linked open data, proposed by Tim Berners Lee some years ago, now provides a practical possibility to apply standard vocabularies and semantics to link distributed data that is published in a non proprietary format. The presentation will show the CIARD RING,  ("routemap to information nodes and gateways"), demonstrate the AGROVOC LOD, will talk about the use of LOD in federating document repositories and will outline an Infrastructure for Information interoperability in Agricultural research and innovation
http://www.ciard.net
The Community and growing….. Founding Partners
 The  Vision and Manifesto “To make public domain agricultural research information and knowledge truly accessible to all” ,[object Object]
CIARD partners will (a) coordinate their efforts, (b) promote common formats, (c) adopt open systems
Create a global network of public collections of information,[object Object]
Contribution and Participation in Science Territory size shows proportion of scientific papers published in 2001 by authors living there.   Copyright SASI Group (University of Sheffield) and Mark Newman (University of Michigan)
RING - Charts and numbers
RING – Numbers http://ring.ciard.net/totals Number of documents potentially reachable through the services registered in the RING. Types of service considered: document repositories and bibliographic databases.
Information InfrastructureforAgriculturalResearch and Innovation
DistributedRepositories ,[object Object]
gene banks
gis data
blogs,
journals
open archives
raw data
technologies
learningobjects
………..,[object Object]
Problem 2: gettingknowledge ? ? ?
Example: BBC Wildlife Finder
Humboldt Squid page, pulled together from a diversity of Linked Data sources BBC TV Documentary BBC News item Wikipedia Animal Diversity Web:Nocturnal  way of life
[object Object],RDF as a common format for merging data
The role of vocabularies in linking data sets
http://aims.fao.org/aos/agrovoc/c_7825
http://eurovoc.europa.eu/218754 http://aims.fao.org/aos/agrovoc/c_7825
http://eurovoc.europa.eu/218754 http://aims.fao.org/aos/agrovoc/c_7825
http://eurovoc.europa.eu/218754 http://agclass.nal.usda.gov/nalt/2011.xml#1780 http://aims.fao.org/aos/agrovoc/c_7825
Linking data through common URIs TOXIC SUBSTANCES http://www.agnic.org/search/CAT85822953 UNBIS AGROVOC NALT http://aims.fao.org/aos/agrovoc/c_7825 http://agclass.nal.usda.gov/nalt/2011.xml#1780 http://eurovoc.europa.eu/218754 Eurovoc http://agris.fao.org/agris-search/search/display.do?f=1996/TR/TR96001.xml;TR9600026 http://unbisnet.un.org:8080/ipac20/ipac.jsp?session=128F308557F34.283092&profile=bib&uri=full=3100001~!685149~!1&ri=1&aspect=subtab124&menu=search&source=~!horizon http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=OJ:L:2010:202:0011:0015:EN:PDF http://aims.fao.org/aos/agrovoc/c_12332        owl:sameAshttp://eurovoc.europa.eu/219871 skos: exact match                  UNBIS: Toxic Substances
If all institutions, which publish about toxic wastes would: ,[object Object]
(many do – low hanging fruit!)
- Publish their metadata as LOD
(quite easy to do, bibData map well to RDFThen Everyone who knows to write SparqlQeries could get all these publications with one shot for a new website on toxic wastes
Vocabularies and LOD Simply publishing your data as RDF does not link them to other data sets  Creating this links by humans is interesting in detail, but unrealistic as mass processing Linking 2 standard vocabularies can link 200 datasets which use these standard vocabularies
RING routemapto  information nodes and gateways VocBench concepts and entitiesreferencetriples Cloud storagefor RDF data triples Tools LOD enabled software  LOD Generator triplifier, concept and entityidentifier Data Services Webservices + APIsto triple stores agINFRA - the elements
http://aims.fao.org
….views into the construction site VocBench AGROVOC LOD on VocBench 1.1 LOD Generator Do you know openCalais? AgroTagger Testing Site LODE-BD The RING: http://ring.ciard.net Tools AgriDrupal AgriOceanDspace : http://193.190.8.15/agri3/
AGROVOC
AGROVOC A multilingual agricultural vocabulary organized as concept scheme in 20 languages Covers agriculture, forestry, fisheries and related themes (food security, land use, environment, etc.) Organized in sub-vocabularies, e.g. chemicals, fisheries terms, scientific/common names of organisms Maintained by a global community (e.g. librarians, terminologists, information managers) using VocBench
AGROVOC - Statistics
Top concepts
Relationships (examples)
Thesauri  into  the AGROVOC  LOD Cloud   ,[object Object]
2000 inlinksEUROVOC NALT  AGROVOC RAMEAU GEMET  STW   LCSH

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World bank 2011-05

  • 1. The CIARD (Coherence in Information for Agricultural Research for development) initiative and a global infrastructure for linked open data Dr. Johannes Keizer Office ofKnowledge Exchange, Research and Extension Food andAgricultureOrganizationofthe UN Talk atWorldbank, 2011, May 17
  • 2. We will promote research for food and agriculture, including research to adapt to, and mitigate climate change, and access to research results and technologies at national, regional and international levels. We will reinvigorate national research systems and will share information and best practices. We will improve access to knowledge. worldfoodsummit 2009
  • 3. FAO has been engaged for decades in making agricultural development information more easily accessible and sharable among it's stakeholders.  These efforts reach back to the early 70s when FAO set up the AGRIS program.  Since the advent of the Internet the AIMS team at FAO HQ is working to make distributed data and information repositories interoperable. This work has been backed up on the institutional level by the CIARD  (Coherence in Information for Agricultural Research for Development) initiative, in which FAO, GFAR, the CGIAR and many national partners collaborate. Technically FAO has underpinned this with the further development of the Agricultural Thesaurus AGROVOC and with initiatives on shared metadata sets (AGRIS AP) and ontologies. The paradigm and technology of linked open data, proposed by Tim Berners Lee some years ago, now provides a practical possibility to apply standard vocabularies and semantics to link distributed data that is published in a non proprietary format. The presentation will show the CIARD RING,  ("routemap to information nodes and gateways"), demonstrate the AGROVOC LOD, will talk about the use of LOD in federating document repositories and will outline an Infrastructure for Information interoperability in Agricultural research and innovation
  • 5. The Community and growing….. Founding Partners
  • 6.
  • 7. CIARD partners will (a) coordinate their efforts, (b) promote common formats, (c) adopt open systems
  • 8.
  • 9. Contribution and Participation in Science Territory size shows proportion of scientific papers published in 2001 by authors living there. Copyright SASI Group (University of Sheffield) and Mark Newman (University of Michigan)
  • 10. RING - Charts and numbers
  • 11. RING – Numbers http://ring.ciard.net/totals Number of documents potentially reachable through the services registered in the RING. Types of service considered: document repositories and bibliographic databases.
  • 13.
  • 22.
  • 24.
  • 26. Humboldt Squid page, pulled together from a diversity of Linked Data sources BBC TV Documentary BBC News item Wikipedia Animal Diversity Web:Nocturnal way of life
  • 27.
  • 28. The role of vocabularies in linking data sets
  • 29.
  • 34. Linking data through common URIs TOXIC SUBSTANCES http://www.agnic.org/search/CAT85822953 UNBIS AGROVOC NALT http://aims.fao.org/aos/agrovoc/c_7825 http://agclass.nal.usda.gov/nalt/2011.xml#1780 http://eurovoc.europa.eu/218754 Eurovoc http://agris.fao.org/agris-search/search/display.do?f=1996/TR/TR96001.xml;TR9600026 http://unbisnet.un.org:8080/ipac20/ipac.jsp?session=128F308557F34.283092&profile=bib&uri=full=3100001~!685149~!1&ri=1&aspect=subtab124&menu=search&source=~!horizon http://eur-lex.europa.eu/LexUriServ/LexUriServ.do?uri=OJ:L:2010:202:0011:0015:EN:PDF http://aims.fao.org/aos/agrovoc/c_12332 owl:sameAshttp://eurovoc.europa.eu/219871 skos: exact match UNBIS: Toxic Substances
  • 35.
  • 36. (many do – low hanging fruit!)
  • 37. - Publish their metadata as LOD
  • 38. (quite easy to do, bibData map well to RDFThen Everyone who knows to write SparqlQeries could get all these publications with one shot for a new website on toxic wastes
  • 39. Vocabularies and LOD Simply publishing your data as RDF does not link them to other data sets  Creating this links by humans is interesting in detail, but unrealistic as mass processing Linking 2 standard vocabularies can link 200 datasets which use these standard vocabularies
  • 40. RING routemapto information nodes and gateways VocBench concepts and entitiesreferencetriples Cloud storagefor RDF data triples Tools LOD enabled software LOD Generator triplifier, concept and entityidentifier Data Services Webservices + APIsto triple stores agINFRA - the elements
  • 42. ….views into the construction site VocBench AGROVOC LOD on VocBench 1.1 LOD Generator Do you know openCalais? AgroTagger Testing Site LODE-BD The RING: http://ring.ciard.net Tools AgriDrupal AgriOceanDspace : http://193.190.8.15/agri3/
  • 44. AGROVOC A multilingual agricultural vocabulary organized as concept scheme in 20 languages Covers agriculture, forestry, fisheries and related themes (food security, land use, environment, etc.) Organized in sub-vocabularies, e.g. chemicals, fisheries terms, scientific/common names of organisms Maintained by a global community (e.g. librarians, terminologists, information managers) using VocBench
  • 48.
  • 49.
  • 50.
  • 51.
  • 52.
  • 53. 2000 inlinksEUROVOC NALT AGROVOC RAMEAU GEMET STW LCSH
  • 54. AGROVOC Links after 3 weeks LOD Outlinks: GEMET-AGROVOC 1,198 RAMEAU-AGROVOC  :700 Total Outlinks: 1898 Inlinks: AGROVOC-EUROVOC:1,297 AGROVOC-GEMET:1,198 AGROVOC-LCSH :1,093 AGROVOC-NAL: 13,390 AGROVOC-STW:1136 AGROVOC-RAMEAU:700 Total Inlinks:18,814
  • 55. Europe:(It is better to use this example during the presentation)http://aims.fao.org/aos/agrovoc/c_2724From the Top concept:Ref:  http://aims.fao.org/aos/agrovoc/c_7644Vocbench (Production)Ref:   http://agrovoc.mimos.my/vocbenchv1.1i/VocBench(Sandbox)Ref:http://agrovoc.mimos.my/vocbenchv1.1i/
  • 57. The VocBench VocBench concepts and entitiestriples
  • 58.
  • 59. Structure independent (i.e. thesauri, Glossaries, etc)
  • 60. Supports RDF (SKOS, SKOS-XL), OWL
  • 62. Supports editorial workflow, with user roles
  • 63. Simple and advanced search
  • 64.
  • 66.
  • 67.
  • 68. Uses Agrovoc as a controlled vocabulary
  • 69. Prototype under testing with excellent results (entire repository of ICARDA indexed)
  • 70. Will produce in future Structured RDF files that can be used to link data like “open Calais”AgroTagger
  • 71.
  • 72.
  • 73.
  • 74. Thank You! http://www.ciard.net http://ring.ciard.net http://aims.fao.org http://agris.fao.org

Hinweis der Redaktion

  1. the chart on the homepage representing the distribution of services across "service types" (http://ring.ciard.net) (implemented with support from John Fereira); the geographic map on the homepage representing the geographic distribution of services;
  2. a first attempt to provide some aggregated data on the number of contents / resources potentially reachable through the services registered in the RING: http://ring.ciard.net/totals
  3. Whatdoesthismean in practice? I will show thiswithanexamplefrom the BBC. The biggestconsumers (and producers) of LOD are as I know the BBC and the New York times (Butnowalso the US government)
  4. During the Web 1.0 phase, Webpageswerecomposedbyhumans. Todaymostwebpages are drivenbydatabasesthat can bedynamicallyqueried. Theycontainthrough RSS feedsalso data fromotherwebsitesThis BBC webpageis a big jumpfurther. I hasnotbeencomposedbyhumans and itisnotfromone database generated. Itisgeneratedfromdifferentdatasourcesthatwerepresentaslinked open data, linkedonlythrough common URIs
  5. Ifresources are marked up withsemanticallydefined and machinereadableconcepts, they can belinked and mashed up preciselyaswehaveseen in the examplefrom the BBC.In thisexamplewe start withan AGRIS record on Hazardouswaste, whichisindexedwith AGROVOC. Alreadynowwe can easily link to material indexedwithEurovoc, hereanexamplefromEuroLex. If the UNBIS thesaurus wouldberestructuredto a conceptscheme and publishedas LOD, related UN documentscouldbeattachedautomaticallyby the machine.
  6. Ifresources are marked up withsemanticallydefined and machinereadableconcepts, they can belinked and mashed up preciselyaswehaveseen in the examplefrom the BBC.In thisexamplewe start withan AGRIS record on Hazardouswaste, whichisindexedwith AGROVOC. Alreadynowwe can easily link to material indexedwithEurovoc, hereanexamplefromEuroLex. If the UNBIS thesaurus wouldberestructuredto a conceptscheme and publishedas LOD, related UN documentscouldbeattachedautomaticallyby the machine.
  7. Ifresources are marked up withsemanticallydefined and machinereadableconcepts, they can belinked and mashed up preciselyaswehaveseen in the examplefrom the BBC.In thisexamplewe start withan AGRIS record on Hazardouswaste, whichisindexedwith AGROVOC. Alreadynowwe can easily link to material indexedwithEurovoc, hereanexamplefromEuroLex. If the UNBIS thesaurus wouldberestructuredto a conceptscheme and publishedas LOD, related UN documentscouldbeattachedautomaticallyby the machine.
  8. Ifresources are marked up withsemanticallydefined and machinereadableconcepts, they can belinked and mashed up preciselyaswehaveseen in the examplefrom the BBC.In thisexamplewe start withan AGRIS record on Hazardouswaste, whichisindexedwith AGROVOC. Alreadynowwe can easily link to material indexedwithEurovoc, hereanexamplefromEuroLex. If the UNBIS thesaurus wouldberestructuredto a conceptscheme and publishedas LOD, related UN documentscouldbeattachedautomaticallyby the machine.
  9. How does this work: A resource is connected with each concept URI in the web. The concepts between three vocabularies are having same literal which is connected with owl:sameAS/exactMatch relationship. As we are speakingaboutthesauri and notontologieswekept the relation tobechosenpurposelyvague. The conceptscouldbematchedwithowl:sameAS or the termscouldbematcheswith SKOS:exactMatch. A lotofdiscussion on thisisongoing
  10. The mainintegrationworksthroughcommonsemanticsCore ofagINFRAtechnologyisaLODstoreofsharedencodedknowledgeorganizationsystemsan automaticmarkupto link structuredandunstructureddatasourcesthroughthissharedKnowledgeOrganizationsystemsSharing withinthe R.I.N.G.Partner registertheirservices, notechnicallimitationLOD – Wrapper for all participatingInstitutionsFor all registered services a „triplificationwrapper“ will besetupThe triplifierworkswith „agConceptsandagIdentities“ tocreatelinkeddataSteadilygrowing LOD ecosystemThe agINFRA LOD ecosystemoffers Webservices forthewww
  11. http://193.190.8.15/agri3/user: agri@oceanpassword: agrihttp://aims.fao.org/lode/bd/subjecthttp://202.73.13.50:58301/AgroTagger/
  12. Note: we identified outlinks to RAMAEU and GEMET, and they have taken them as inlinks to their own thesaurus.
  13. - All links are checked by a domain expert.
  14. Oneof the groundbreakingenterprises in this area isThomsonReuters “Open Calais”. Thisis a webservicethatprovidessemanticmark up foranyunstructured text thatyoufeedintotheir service The service is free ofCharge. Why? I will show youlater.
  15. My team in collaborationwith the IndianInstituteofTechnology in Kanpur isdeveloping a similar service foroursubject area.
  16. Wehavehere a text from 1964 without a bibliographic record at handabout a plantprotectionissue
  17. Open Calais isverygood in thoseareas, in whichtheyhavetheirownelaboratedconceptschemeagainstwhich the texts are analyzed: “Places”, “Persons”, “Business Processes” , “IndustryTerms”, butitisweak in the specifictopicanalysis, whattheycall “social tags”
  18. AgroTaggerstilllacksmanyof the sophisticated featuresof “Open Calais” ,butismuch, muchbetter in the subjectanalysisof the text