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Geospatial information, a key element to
strength Europe’s defences against infectious
diseases: the ECDC experience


ESRI European Users Conference   Dr. Virginia Estevez, Senior Expert GIS
October 26-28, 2011 Madrid       Dr. Lorenzo de Simone, Scientific Officer GIS
Aim of the briefing

• ECDC and its mission


• Current geospatial information available and the context in
  which it is used to monitor and respond to current infectious disease threats
  in Europe

• Future development plans to
  create a centralized GIS
  platform




Geospatial information, a key element to strength Europe’s    ESRI European Users Conference
Defences against infectious diseases: the ECDC experience     October 26-28, 2011 Madrid
ECDC

The European Centre for Disease Prevention and Control (ECDC), is the
European Union agency with the responsibility to strengthen Europe's
defences against infectious diseases.


Mission

To identify, assess and
communicate current and
emerging threats to human
Health posed by infectious
diseases, and to support and
help coordinate European Union
countries’ preparedness and
response capacities.

Geospatial information, a key element to strength Europe’s   ESRI European Users Conference
Defences against infectious diseases: the ECDC experience    October 26-28, 2011 Madrid
GIS Team

Geospatial information, a key element to strength Europe’s              ESRI European Users Conference
Defences against infectious diseases: the ECDC experience               October 26-28, 2011 Madrid
Current geospatial information available
and context in which it is used
Before creation of GIS team
•   ESRI datasets (VMAP0): Admin. boundaries, hydrographic network…
•   Population data from EUROSTAT
•   Other datasets disperse: Raster/Vector/Tables
•   Environmental datasets from the European Environment &
    Epidemiology (E3) network



After creation of GIS team
• Acquisition of NUTS 0, 1, 2, 3
• GAUL data (0,1,2)
• In process to collect geo-reference health data
• In process to collect a good repository of raster/
  vector maps worldwide
• Some specific datasets from GISCO geodatabase
Geospatial information, a key element to strength Europe’s      ESRI European Users Conference
Defences against infectious diseases: the ECDC experience       October 26-28, 2011 Madrid
GIS Needs Assessment Report




                        GIS (Core Function at ECDC)

     Monitoring         Early warning Outbreak assessment Inputs scientific network
       trends             functions    Field epidemiology Multidisciplinary approach
                        Health threats     Responses
                        Preparedness


     Surveillance          Epidemic                  Response     Scientific Advice / Disease
                          Intelligence                                Specific Programs
        i.e. TESSy           i.e. EPIs                 i.e. TTT      i.e. E3, VBornet …

Geospatial information, a key element to strength Europe’s              ESRI European Users Conference
Defences against infectious diseases: the ECDC experience               October 26-28, 2011 Madrid
Surveillance
  •   Identify spatial trends of diseases
  •   Retrospective analysis
  •   Descriptive maps
  •   Reports for publication




Geospatial information, a key element to strength Europe’s   ESRI European Users Conference
Defences against infectious diseases: the ECDC experience    October 26-28, 2011 Madrid
Surveillance

                                                                                                                         Joint
                                                                                                                         Zoonosis
                                                                                                                         report
                                                                                                                         (ECDC /
                                                                                                                         EFSA)




                                                         Source: http://www.efsa.europa.eu/en/efsajournal/doc/1496.pdf

Distribution of Echinococcus spp., E. multilocularis and E. granulosus in humans, 2007-2009
Geospatial information, a key element to strength Europe’s                                          ESRI European Users Conference
Defences against infectious diseases: the ECDC experience                                           October 26-28, 2011 Madrid
GIS (Core Function at ECDC)

     Monitoring         Early warning Outbreak assessment Inputs scientific network
       trends             functions    Field epidemiology Multidisciplinary approach
                        Health threats     Responses
                        Preparedness


     Surveillance          Epidemic                  Response     Scientific Advice / DSPs
                          Intelligence
        i.e. TESSy           i.e. EPIs                 i.e. TTT       i.e. E3, VBornet …

Geospatial information, a key element to strength Europe’s               ESRI European Users Conference
Defences against infectious diseases: the ECDC experience                October 26-28, 2011 Madrid
Epidemic Intelligence
  Early warning functions
  Monitoring of health events
  Follow up of health events




Geospatial information, a key element to strength Europe’s   ESRI European Users Conference
Defences against infectious diseases: the ECDC experience    October 26-28, 2011 Madrid
Epidemic Intelligence
    Early warning functions
    Monitoring of health events
    Follow up of health events.




Geospatial information, a key element to strength Europe’s   ESRI European Users Conference
Defences against infectious diseases: the ECDC experience    October 26-28, 2011 Madrid
Spread of influenza A(H1)/A(H1N1) in
  EU/EEA countries
No                   Week 38/2009
report

No
activity

Sporadic


Local


Regional


Wide-
spread
                             Source: http://ecdc.europa.eu/en/healthtopics/influenza/epidemiological_data/Pages/influenza_activity_EU_EEA_activity_maps.aspx


Geospatial information, a key element to strength Europe’s                                                        ESRI European Users Conference
Defences against infectious diseases: the ECDC experience                                                         October 26-28, 2011 Madrid
GIS (Core Function at ECDC)

     Monitoring         Early warning Outbreak assessment Inputs scientific network
       trends             functions    Field epidemiology Multidisciplinary approach
                        Health threats     Responses
                        Preparedness


     Surveillance          Epidemic                  Response     Scientific Advice / DSPs
                          Intelligence
        i.e. TESSy           i.e. EPIs                 i.e. TTT       i.e. E3, VBornet …

Geospatial information, a key element to strength Europe’s               ESRI European Users Conference
Defences against infectious diseases: the ECDC experience                October 26-28, 2011 Madrid
Response
  Outbreak assessment / Risk assessment / Risk analysis
  Short Term protection / Prospective analysis




                Source: http://ecdc.europa.eu/en/activities/diseaseprogrammes/emerging_and_vector_borne_diseases/PublishingImages/110623_West_Nile_map_2010_high_res.JPG


Geospatial information, a key element to strength Europe’s                                                                     ESRI European Users Conference
Defences against infectious diseases: the ECDC experience                                                                      October 26-28, 2011 Madrid
GIS (Core Function at ECDC)

     Monitoring         Early warning Outbreak assessment Inputs scientific network
       trends             functions    Field epidemiology Multidisciplinary approach
                        Health threats     Responses
                        Preparedness


     Surveillance          Epidemic                  Response     Scientific Advice / DSPs
                          Intelligence
        i.e. TESSy           i.e. EPIs                 i.e. TTT       i.e. E3, VBornet …

Geospatial information, a key element to strength Europe’s               ESRI European Users Conference
Defences against infectious diseases: the ECDC experience                October 26-28, 2011 Madrid
Scientific Advice /
Disease Specific Projects

• Links to Environmental / Socio-economic data

• Inputs scientific network / expertise

• Long term projections

• Climatic impact & burden of diseases

• Risk mapping & collaboration with external partners of public
  health arena

• Multidisciplinary approach


Geospatial information, a key element to strength Europe’s   ESRI European Users Conference
Defences against infectious diseases: the ECDC experience    October 26-28, 2011 Madrid
Current known distribution of Aedes aegypti
                                                                                         June 2011




                                      Source: http://ecdc.europa.eu/en/activities/diseaseprogrammes/emerging_and_vector_borne_diseases/Pages/VBORNET_maps.aspx



Geospatial information, a key element to strength Europe’s                                                         ESRI European Users Conference
Defences against infectious diseases: the ECDC experience                                                          October 26-28, 2011 Madrid
Source: http://www.ecdc.europa.eu/en/publications/Publications/0905_TER_Development_of_Aedes_Albopictus_Risk_Maps.pdf

Geospatial information, a key element to strength Europe’s                                                   ESRI European Users Conference
Defences against infectious diseases: the ECDC experience                                                    October 26-28, 2011 Madrid
Prospective impact of climate change on Aedes albopictus distribution in Europe: minimal impact, long-term change scenario

                                    Source: http://www.ecdc.europa.eu/en/publications/Publications/0905_TER_Development_of_Aedes_Albopictus_Risk_Maps.pdf

Geospatial information, a key element to strength Europe’s                                                       ESRI European Users Conference
Defences against infectious diseases: the ECDC experience                                                        October 26-28, 2011 Madrid
The future ….
  Enterprise GIS for ECDC

  Based on:
  1. GIS Needs Assessment Report produced in June 2010

  2. Centralized GIS platform that will support disease mapping,
        data analysis and data sharing among ECDC experts and
        potentially to extranet public

  3. Compilation of standardized spatial data




Geospatial information, a key element to strength Europe’s   ESRI European Users Conference
Defences against infectious diseases: the ECDC experience    October 26-28, 2011 Madrid
Enterprise GIS

ECDC MAP MAKER APPLICATION (EMMA)



   1st Phase                          2nd Phase               3rd Phase



         Disease                                                Development of
         Mapping                          Connection to
                                          Other Internal       Analytical Functions
        Application                                          & Geoportal Capabilities
                                             Systems




Geospatial information, a key element to strength Europe’s          ESRI European Users Conference
Defences against infectious diseases: the ECDC experience           October 26-28, 2011 Madrid
ECDC MAP MAKER APPLICATION (EMMA)

             1st Phase: Disease Mapping Application

• Rapid & friendly web application

• Inclusion of an entry data module to facilitate mapping work

• Update & edit event data

• Elaboration of two types of maps: choropleth

  & graduated symbols

• Possibility to map various spatial resolutions

  (NUTS)

• Customized data classification

• Provision of standard GIS tools
Geospatial information, a key element to strength Europe’s   ESRI European Users Conference
Defences against infectious diseases: the ECDC experience    October 26-28, 2011 Madrid
ECDC MAP MAKER APPLICATION (EMMA)

             2nd Phase: Integration with Internal Systems

New projects

•   Creation of specific mapping environments

Projects already ongoing

•   Development of a mapping interface within their

     own environments

•   Inclusion of specific data entry modules to

    facilitate mapping work

•   Establishment of map services


Geospatial information, a key element to strength Europe’s   ESRI European Users Conference
Defences against infectious diseases: the ECDC experience    October 26-28, 2011 Madrid
ECDC MAP MAKER APPLICATION (EMMA)

             Analytical functionalities, Geoportal capabilities
             Harmonization of all GIS modules




•   Development of spatial analysis techniques: Buffering, cluster detection, etc.


•   Development of Geoportal functionalities: drag & drop of selected datasets,

    elaborated maps, map templates,

    metadata files visualization & editing, etc.

•   Integration of all mapping applications &

    functionalities within a common platform



Geospatial information, a key element to strength Europe’s          ESRI European Users Conference
Defences against infectious diseases: the ECDC experience           October 26-28, 2011 Madrid
Conclusions
Spatial information combined with GIS within Public Health:


• Allows managing emergencies: risk assessments, monitoring outbreaks, etc...
• Contributes to achieving public health objectives
• Plays an essential role in publich health communication
• Provides scientific evidence

Spatial information at ECDC:

• Can be used within a wide diversity of areas: from emergencies to long term
  predictions
• Provides timely information
• Is a cost effective resource
• Plays a unifying role: Integrates different objectives, projects & expertises
  within the organization
Geospatial information, a key element to strength Europe’s   ESRI European Users Conference
Defences against infectious diseases: the ECDC experience    October 26-28, 2011 Madrid
Thank you for your attention!!!




Dr. Virginia Estévez Adán
+46 858 60 13 52
virginia.estevez@ecdc.europa.eu
Geospatial information, a key element to strength Europe’s          ESRI European Users Conference
Defences against infectious diseases: the ECDC experience           October 26-28, 2011 Madrid

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Geospatial information, a key element to strength Europe´s defences against infectius diseases

  • 1. Geospatial information, a key element to strength Europe’s defences against infectious diseases: the ECDC experience ESRI European Users Conference Dr. Virginia Estevez, Senior Expert GIS October 26-28, 2011 Madrid Dr. Lorenzo de Simone, Scientific Officer GIS
  • 2. Aim of the briefing • ECDC and its mission • Current geospatial information available and the context in which it is used to monitor and respond to current infectious disease threats in Europe • Future development plans to create a centralized GIS platform Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 3. ECDC The European Centre for Disease Prevention and Control (ECDC), is the European Union agency with the responsibility to strengthen Europe's defences against infectious diseases. Mission To identify, assess and communicate current and emerging threats to human Health posed by infectious diseases, and to support and help coordinate European Union countries’ preparedness and response capacities. Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 4. GIS Team Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 5. Current geospatial information available and context in which it is used Before creation of GIS team • ESRI datasets (VMAP0): Admin. boundaries, hydrographic network… • Population data from EUROSTAT • Other datasets disperse: Raster/Vector/Tables • Environmental datasets from the European Environment & Epidemiology (E3) network After creation of GIS team • Acquisition of NUTS 0, 1, 2, 3 • GAUL data (0,1,2) • In process to collect geo-reference health data • In process to collect a good repository of raster/ vector maps worldwide • Some specific datasets from GISCO geodatabase Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 6. GIS Needs Assessment Report GIS (Core Function at ECDC) Monitoring Early warning Outbreak assessment Inputs scientific network trends functions Field epidemiology Multidisciplinary approach Health threats Responses Preparedness Surveillance Epidemic Response Scientific Advice / Disease Intelligence Specific Programs i.e. TESSy i.e. EPIs i.e. TTT i.e. E3, VBornet … Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 7. Surveillance • Identify spatial trends of diseases • Retrospective analysis • Descriptive maps • Reports for publication Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 8. Surveillance Joint Zoonosis report (ECDC / EFSA) Source: http://www.efsa.europa.eu/en/efsajournal/doc/1496.pdf Distribution of Echinococcus spp., E. multilocularis and E. granulosus in humans, 2007-2009 Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 9. GIS (Core Function at ECDC) Monitoring Early warning Outbreak assessment Inputs scientific network trends functions Field epidemiology Multidisciplinary approach Health threats Responses Preparedness Surveillance Epidemic Response Scientific Advice / DSPs Intelligence i.e. TESSy i.e. EPIs i.e. TTT i.e. E3, VBornet … Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 10. Epidemic Intelligence Early warning functions Monitoring of health events Follow up of health events Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 11. Epidemic Intelligence Early warning functions Monitoring of health events Follow up of health events. Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 12. Spread of influenza A(H1)/A(H1N1) in EU/EEA countries No Week 38/2009 report No activity Sporadic Local Regional Wide- spread Source: http://ecdc.europa.eu/en/healthtopics/influenza/epidemiological_data/Pages/influenza_activity_EU_EEA_activity_maps.aspx Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 13. GIS (Core Function at ECDC) Monitoring Early warning Outbreak assessment Inputs scientific network trends functions Field epidemiology Multidisciplinary approach Health threats Responses Preparedness Surveillance Epidemic Response Scientific Advice / DSPs Intelligence i.e. TESSy i.e. EPIs i.e. TTT i.e. E3, VBornet … Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 14. Response Outbreak assessment / Risk assessment / Risk analysis Short Term protection / Prospective analysis Source: http://ecdc.europa.eu/en/activities/diseaseprogrammes/emerging_and_vector_borne_diseases/PublishingImages/110623_West_Nile_map_2010_high_res.JPG Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 15. GIS (Core Function at ECDC) Monitoring Early warning Outbreak assessment Inputs scientific network trends functions Field epidemiology Multidisciplinary approach Health threats Responses Preparedness Surveillance Epidemic Response Scientific Advice / DSPs Intelligence i.e. TESSy i.e. EPIs i.e. TTT i.e. E3, VBornet … Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 16. Scientific Advice / Disease Specific Projects • Links to Environmental / Socio-economic data • Inputs scientific network / expertise • Long term projections • Climatic impact & burden of diseases • Risk mapping & collaboration with external partners of public health arena • Multidisciplinary approach Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 17. Current known distribution of Aedes aegypti June 2011 Source: http://ecdc.europa.eu/en/activities/diseaseprogrammes/emerging_and_vector_borne_diseases/Pages/VBORNET_maps.aspx Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 18. Source: http://www.ecdc.europa.eu/en/publications/Publications/0905_TER_Development_of_Aedes_Albopictus_Risk_Maps.pdf Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 19. Prospective impact of climate change on Aedes albopictus distribution in Europe: minimal impact, long-term change scenario Source: http://www.ecdc.europa.eu/en/publications/Publications/0905_TER_Development_of_Aedes_Albopictus_Risk_Maps.pdf Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 20. The future …. Enterprise GIS for ECDC Based on: 1. GIS Needs Assessment Report produced in June 2010 2. Centralized GIS platform that will support disease mapping, data analysis and data sharing among ECDC experts and potentially to extranet public 3. Compilation of standardized spatial data Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 21. Enterprise GIS ECDC MAP MAKER APPLICATION (EMMA) 1st Phase 2nd Phase 3rd Phase Disease Development of Mapping Connection to Other Internal Analytical Functions Application & Geoportal Capabilities Systems Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 22. ECDC MAP MAKER APPLICATION (EMMA) 1st Phase: Disease Mapping Application • Rapid & friendly web application • Inclusion of an entry data module to facilitate mapping work • Update & edit event data • Elaboration of two types of maps: choropleth & graduated symbols • Possibility to map various spatial resolutions (NUTS) • Customized data classification • Provision of standard GIS tools Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 23. ECDC MAP MAKER APPLICATION (EMMA) 2nd Phase: Integration with Internal Systems New projects • Creation of specific mapping environments Projects already ongoing • Development of a mapping interface within their own environments • Inclusion of specific data entry modules to facilitate mapping work • Establishment of map services Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 24. ECDC MAP MAKER APPLICATION (EMMA) Analytical functionalities, Geoportal capabilities Harmonization of all GIS modules • Development of spatial analysis techniques: Buffering, cluster detection, etc. • Development of Geoportal functionalities: drag & drop of selected datasets, elaborated maps, map templates, metadata files visualization & editing, etc. • Integration of all mapping applications & functionalities within a common platform Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 25. Conclusions Spatial information combined with GIS within Public Health: • Allows managing emergencies: risk assessments, monitoring outbreaks, etc... • Contributes to achieving public health objectives • Plays an essential role in publich health communication • Provides scientific evidence Spatial information at ECDC: • Can be used within a wide diversity of areas: from emergencies to long term predictions • Provides timely information • Is a cost effective resource • Plays a unifying role: Integrates different objectives, projects & expertises within the organization Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid
  • 26. Thank you for your attention!!! Dr. Virginia Estévez Adán +46 858 60 13 52 virginia.estevez@ecdc.europa.eu Geospatial information, a key element to strength Europe’s ESRI European Users Conference Defences against infectious diseases: the ECDC experience October 26-28, 2011 Madrid