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Dr. Debasish Pradhan
M Pharm, Ph.D, D.Sc,, FIC, MBA, PDF (USA)
Sr. Faculty Pharmacology, UDPS, Utkal University
 to develop rational means to optimize drug therapy,
 to ensure maximum efficiency with minimal adverse effects.
 attempts to eliminate the trial-and-error method of prescribing, allowing
physicians to take into consideration their patient's genes, the functionality
of these genes,
 to achieve better treatment outcomes, greater efficacy, minimization of the
occurrence of drug toxicities and adverse drug reactions (ADRs).
 two possible types of input can be used: genotyping or exome or
whole genome sequencing. Sequencing provides many more data points, including
detection of mutations that prematurely terminate the synthesized protein.
 Pharmacogenomics is the study of the role of the genome
in drug response. Its name (pharmaco- + genomics) reflects
its combining of pharmacology and genomics. Although
both terms relate to drug response based on genetic
influences, pharmacogenetics focuses on single drug-gene
interactions, while pharmacogenomics encompasses a
more genome-wide association approach, incorporating
genomics and epigenetics while dealing with the effects of
multiple genes on drug response.
 Medicine is personal:
 We are all different.
 Some of our differences translate into how we react to drugs
as individuals.
 This is why personalized medicine is important to everyone.
 Why does someone need twice the standard dose to
be effective?
 Why does this drug work for you but not me?
 Why do I have side-effects and you don’t?
 Why do some people get cancer and others don’t?
If it were not for the great variability among
individuals, medicine might well be a science, not
an art.
 Sir William Osler, Physician 1892
 Johns Hopkins School of Medicine
 Johns Hopkins Hospital
 Father of modern medicine
 The Right Dose of
 The Right Drug for
 The Right Indication for
 The Right Patient at
 The Right Time.
Or
Ioatrogenic diseases & Adv.Drug. Reaction
• 10% hospital patients
• 6th leading cause of death in USA itself every year
• May lead to drug being withdrawn from market
 Pharmacogenetics: The role of genetics in drug
responses due to differences in metabolism
according to age, sex, colour or
The branch of pharmacology concerned
with the effect of genetic factors on
reactions to drugs.
 Pharmacogenomics : The science that allows us to
predict a response to drugs based on an individuals
genetic make up or
How genetic make up in the body response to
the drugs. Patient drug interaction is a complex
trait influenced by genes
 Pharmacogenetics: study of individual gene-drug
interactions, usually one or two genes that have
dominant effect on a drug response (SIMPLE
relationship)
 Pharmacogenomics: study of genomic influence on
drug response, often using high-throughput data.
 Asian appears to process the drug differently and half of the standard drugs
has same effect as in full dose of USA or Europeans. Full dose can increase
the side effects.
Courtesy of Michelle Whirl-Carillo
Courtesy of Michelle Whirl-Carillo
 Codeine is a commonly used opioid
 Codeine is a prodrug
 It must be metabolized into morphine for activity
 Cytochrome P450 allele CYP2D6 is the
metabolizing enzyme in the liver
 codeine does not work effectively in these individuals
Courtesy of Michelle Whirl-Carillo
© 2006 American Medical Association. All rights reserved
 Ranks #1 in total mentions of deaths for drugs
causing adverse events
 Ranks among the top drugs associated hospital
emergency room visits for bleeding
 Overall frequency of major bleeding range from 2% to
16% (versus 0.1% for most drugs)
 Minor bleeding event rates in randomized control
trials of new anticoagulants has been as high as 29%
per year.
 More rapid determination of stable therapeutic
dose.
 Better prediction of dose than clinical methods
alone.
 Applicable to the 70-75% of patients not in
controlled anticoagulation centers.
 Often, drugs are only effective in specific “sub-
populations” (responders).
 Early identification of responders can have a
dramatic effect of treatment success.
 Treatment of non-responders puts these
individuals at unnecessary risk of adverse
events, while providing no benefit.
 Personalized Medicine allows the identification of
responders and non-responders for targeted
therapies.
 This is happening today!
 Herceptin (breast cancer, target: Her2/neu)
 Erbitux (colorectal cancer, target: EGFR)
 Tarceva (lung cancer, target: EGFR)
 Strattera (attention-deficit/ hyperactivity
disorder, Metabolism: P4502D6)
 6-MP (leukemia, Metabolism: TPMT)
 Antivirals (i.e. resistance based on form of
HIV)
 etc. and the list is growing rapidly ...

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Pharmacogenomics

  • 1. Dr. Debasish Pradhan M Pharm, Ph.D, D.Sc,, FIC, MBA, PDF (USA) Sr. Faculty Pharmacology, UDPS, Utkal University
  • 2.  to develop rational means to optimize drug therapy,  to ensure maximum efficiency with minimal adverse effects.  attempts to eliminate the trial-and-error method of prescribing, allowing physicians to take into consideration their patient's genes, the functionality of these genes,  to achieve better treatment outcomes, greater efficacy, minimization of the occurrence of drug toxicities and adverse drug reactions (ADRs).  two possible types of input can be used: genotyping or exome or whole genome sequencing. Sequencing provides many more data points, including detection of mutations that prematurely terminate the synthesized protein.
  • 3.  Pharmacogenomics is the study of the role of the genome in drug response. Its name (pharmaco- + genomics) reflects its combining of pharmacology and genomics. Although both terms relate to drug response based on genetic influences, pharmacogenetics focuses on single drug-gene interactions, while pharmacogenomics encompasses a more genome-wide association approach, incorporating genomics and epigenetics while dealing with the effects of multiple genes on drug response.
  • 4.  Medicine is personal:  We are all different.  Some of our differences translate into how we react to drugs as individuals.  This is why personalized medicine is important to everyone.  Why does someone need twice the standard dose to be effective?  Why does this drug work for you but not me?  Why do I have side-effects and you don’t?  Why do some people get cancer and others don’t?
  • 5. If it were not for the great variability among individuals, medicine might well be a science, not an art.  Sir William Osler, Physician 1892  Johns Hopkins School of Medicine  Johns Hopkins Hospital  Father of modern medicine
  • 6.  The Right Dose of  The Right Drug for  The Right Indication for  The Right Patient at  The Right Time. Or Ioatrogenic diseases & Adv.Drug. Reaction • 10% hospital patients • 6th leading cause of death in USA itself every year • May lead to drug being withdrawn from market
  • 7.  Pharmacogenetics: The role of genetics in drug responses due to differences in metabolism according to age, sex, colour or The branch of pharmacology concerned with the effect of genetic factors on reactions to drugs.  Pharmacogenomics : The science that allows us to predict a response to drugs based on an individuals genetic make up or How genetic make up in the body response to the drugs. Patient drug interaction is a complex trait influenced by genes
  • 8.  Pharmacogenetics: study of individual gene-drug interactions, usually one or two genes that have dominant effect on a drug response (SIMPLE relationship)  Pharmacogenomics: study of genomic influence on drug response, often using high-throughput data.  Asian appears to process the drug differently and half of the standard drugs has same effect as in full dose of USA or Europeans. Full dose can increase the side effects. Courtesy of Michelle Whirl-Carillo
  • 9. Courtesy of Michelle Whirl-Carillo
  • 10.  Codeine is a commonly used opioid  Codeine is a prodrug  It must be metabolized into morphine for activity  Cytochrome P450 allele CYP2D6 is the metabolizing enzyme in the liver  codeine does not work effectively in these individuals Courtesy of Michelle Whirl-Carillo
  • 11. © 2006 American Medical Association. All rights reserved
  • 12.  Ranks #1 in total mentions of deaths for drugs causing adverse events  Ranks among the top drugs associated hospital emergency room visits for bleeding  Overall frequency of major bleeding range from 2% to 16% (versus 0.1% for most drugs)  Minor bleeding event rates in randomized control trials of new anticoagulants has been as high as 29% per year.
  • 13.
  • 14.  More rapid determination of stable therapeutic dose.  Better prediction of dose than clinical methods alone.  Applicable to the 70-75% of patients not in controlled anticoagulation centers.
  • 15.  Often, drugs are only effective in specific “sub- populations” (responders).  Early identification of responders can have a dramatic effect of treatment success.  Treatment of non-responders puts these individuals at unnecessary risk of adverse events, while providing no benefit.  Personalized Medicine allows the identification of responders and non-responders for targeted therapies.  This is happening today!
  • 16.
  • 17.  Herceptin (breast cancer, target: Her2/neu)  Erbitux (colorectal cancer, target: EGFR)  Tarceva (lung cancer, target: EGFR)  Strattera (attention-deficit/ hyperactivity disorder, Metabolism: P4502D6)  6-MP (leukemia, Metabolism: TPMT)  Antivirals (i.e. resistance based on form of HIV)  etc. and the list is growing rapidly ...