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Friday, September 23, 2016
CREDIT SEMINAR
Topic: Molecular basis of plant defense against biotic stress
Presented By: Deba Jit Das
1
Friday, September 23, 2016
Contents of the talk
 Introduction about biotic stress
 Plant defense against pathogens
 Plant defense against insect herbivores
 Case study
2
Friday, September 23, 2016
Plant defense against
pathogens
3
What are the challenges of plants?
 Being sessile in nature, plants are
exploited as a source of food and shelter
by all parasites
 Plants have evolved sophisticated defense
mechanisms to fight against their enemies
Friday, September 23, 2016 4
How plant pathogens can be grouped???
 Pathogens can be any agents that causes infections or diseases specially micro organisms
 Pathogens can be of different types, such as
Biotrophic: Fungus Bleumeria graminis, bacteria Xanthomonas oryzae
Necrotrophic: Fungus Magnaporthe grisea
Hemibiotrophics: Gray mold fungus Botrytis cinerea, bacteria Erwinia
carotovora
Friday, September 23, 2016 5
Friday, September 23, 2016
What are the plant defense responses?
 Hypersensitive response
 Production of reactive oxygen species
 Cell wall fortification
 Production of antimicrobial metabolites (phytoalexins)
 Defense signal transduction
 Synthesis of enzymes harmful to pathogen (eg. chitinases, glucanases)
6
Friday, September 23, 2016
How does plants defend themselves against pathogens???
 Physical barrier: Leaf hairs, wax, thick cell wall, cuticle, antimicrobial compounds such as
phytoalexins etc
 Basal resistance or innate immune response:
1. PAMP-triggered immunity (PTI)
2. Effector Triggered Immunity (ETI)
 Hyper sensitive response and activation of SAR
7
Friday, September 23, 2016
What is basal resistance?
 Triggered by trans-membrane receptors that recognize conserved molecules released by a
variety of (unrelated) microbes
 Include cell wall fragments, chitin or peptide motifs in bacterial flagella - PAMPs or
MAMPs
 PAMP- triggered immunity (PTI)
(Liu et al.,2008)
8
Friday, September 23, 2016
What are the different Receptor proteins?
9
Friday, September 23, 2016
What are the different elicitors of pathogens??
 Any substance that has the capability of activating defense responses in plants
 Include components of the cell surface as well as excreted metabolites
Elicitors
General Race specific
a) Oligosaccharide elicitors a) avr gene products
b) Protein/peptide elicitors
10
Friday, September 23, 2016
Phases of pathogen triggered immunity
11
Friday, September 23, 2016
 Flagellin Sensing 2 (FLS2) is a leucine- rich repeat receptor kinase (LRR-RK) that binds to
Flg22. and confers recognition specificity.
 Arabidopsis LRR-RK EFR binds bacterial EF-Tu
 The tomato LRR receptor-like proteins EIX1/2 recognizes fungal xylanase.
 Rice LysM domain containing receptor-like protein (RLP) CEBiP binds fungal chitin.
Examples of PAMP triggered immunity
12
Friday, September 23, 2016
What is secondary defense of plants??
 Against virulence effector proteins produced by pathogens
 Effector –triggered immunity (ETI)
 Mediated by resistance (R) proteins
13
Friday, September 23, 2016
Formation of active PRR complex
14
Friday, September 23, 2016
Examples of resistance genes
15
Friday, September 23, 2016
Models of pathogen recognition by plants
 Three different models has been postulated
(I) Gene for gene resistance model
(a) Elicitor-Suppressor model
(b) Elicitor-Receptor model
(II) Guard model
(III) Decoy model
16
Friday, September 23, 2016
Gene for gene resistance model
17
Friday, September 23, 2016
Guard and Decoy model
18
Friday, September 23, 2016
Evidence of Guard hypothesis
19
Friday, September 23, 2016
Molecular mechanism of plant defense against Biotrophs and Necrotrophs??
20
Friday, September 23, 2016
How does SA, JA ant ET activate defense responsive genes??
21
Friday, September 23, 2016
Plant defense against
herbivores
22
Friday, September 23, 2016
How does plants recognize herbivore attack??
Recognition of Insect Herbivore Attack
Insect Oral
Secretions
Ovipositional
Fluids
23
Friday, September 23, 2016
What are the Herbivores associated elicitors??
24
Friday, September 23, 2016
How does plant react against insect Oviposition??
 Insect oviposition fluids can give rise to
defense responses in the plant
 Many female adult herbivorous insects
lay eggs directly into plants, and some
species are known to perceive insects’
oviposition activities and deploy
defenses responses
Oviposition by Pieris brassicae causes hypersensitive response on
Arabidopsis
25
Friday, September 23, 2016
Oviposition induced plant responses against herbivores
26
Friday, September 23, 2016
How does plants defend themselves against herbivores??
 Plants produces different kinds of defensive compounds upon insect infestations
 Plants releases volatile organic compounds that attract
 Insect infestation leads to activation of different signaling pathways
 Production of Reactive Oxygen Species (ROS)
27
Friday, September 23, 2016
Hypersensitive response against oviposition
Egg of small cabbage white butterfly, inducing hypersensitive
response–like necrosis in Brassica nigra.
Egg of Heliothis subflexa inducing neoplastic growth in Physalis
angulata leaf.
28
Friday, September 23, 2016
What are the changes occur in plant??
29
Friday, September 23, 2016
What are the different types of defense responses against herbivores??
Defense responses
Direct defense
Indirect
defense
30
Friday, September 23, 2016
What are the direct defense responses??
 The term “direct defense” is used when plants produce physical barriers against insect
herbivores, or compounds that exert repellent, antinutritive or toxic effects on the
herbivores themselves
 Bioactive Specialized Compounds
 Hypersensitive response
 Digestibility Reduction
 Reallocation of Resources
31
Friday, September 23, 2016
How does bioactive specialized compounds inhibit insect infestation?
32
Friday, September 23, 2016
What are the digestibility reducing compounds??
 Plants produce a number of defense compounds that reduce insect herbivores ability to
digest the plant derived nutrients
 Proteinase Inhibitors-inhibit proteases
 α-amylase inhibitors-inhibit carbohydrate digestive enzymes
 Lectins-binds to mebrane glycosyl group
 Chitinases-disrupts gut peritrophic membrane
 Polyphenol oxidases- Antinutritive enzyme
33
Friday, September 23, 2016
Indirect defense response
 The term “indirect defense” is used when plants attract, nourish or house other organisms to
reduce enemy pressure.
 Herbivore-induced plant volatiles
 Extrafloral Nectar
34
Friday, September 23, 2016
Herbivore induced plant volatile
 Herbivore-induced plant volatiles (HIPV) can mediate indirect defenses, i.e., by attracting
foraging carnivorous predators and parasitoids that kill herbivores
35
Friday, September 23, 2016
Examples of HIPV
HIPVs Plant Herbivore Natural Enemy
β-caryophyllene
β-ocimene
Tobacco H. virescens Cardiochiles nigriceps
(E)-β-farnesene
(E)-caryophyllene
(E)-α-bergamotene
Maize S. littoralis Cotesia marginiventris
(E)–4,8–dimethyl-1,3,7-nonatriene Maize M. separata Exorista japonica
Cotesia kariyai
linalool
α-pinene
1-hexanol
Maize M. separata Exorista japonica
Campoletis chlorideae
36
Friday, September 23, 2016
Extrafloral Nectar
 Extrafloral nectar (EFN) appear in more than 70 plant species spanning angiosperms,
gymnosperms and ferns, indicating that it is evolutionary more ancient than floral nectar
 In contrast to floral nectar, used to attract pollinators, EFN is secreted on leaves and
shoots to attract predators and parasitoids
37
Friday, September 23, 2016
Extrafloral nectar as an herbivore-induced defense trait
Family Species Herbivore Trait enhanced
Bignoniaceae Catalpa bignonioides
(Indian bean)
Ceratomia catalpae
(Catalpa Sphinx)
Sugar content in EFN
Euphorbiaceae Ricinus communis
(Castor)
Spodoptera littoralis EFN volume
Euphorbiaceae Triadica sebifera
(Chinese tallow tree)
Gadirtha inexacta,
and
Grammodes geometrica
Secretion of total solids
Malvaceae Gossypium herbaceum
(Cotton)
Spodoptera littoralis EFN volume
38
Friday, September 23, 2016
Mechanism of JA signaling upon insect attack??
39
Friday, September 23, 2016
What are the systemic response of plant against herbivores??
40
Friday, September 23, 2016
Regulation of defense response
 Levels of jasmonic acid rise in response to herbivor damage
 This hormone can trigger many types of plant defenses including bioactive compounds
 The action of jasmonic acid induces the transcription of many genes involved in plant defense
 Jasmonic acid turns on genes for proteinase inhibitor.
41
Friday, September 23, 2016
JA regulated defense responsive genes
42
Friday, September 23, 2016
JA regulated defense responsive genes
43
Friday, September 23, 2016
Case study
44
Friday, September 23, 2016 45
Friday, September 23, 2016
Introduction
 Alternaria black spot (causal organism- Alternaria brassicae) an important disease of rape
seed and mustard (Brassica juncea) in India
 Wild relative of mustard namely Sinapis alba is known to moderately resistant against the
pathogen.
 Expression different types of PR-genes upon infection by the pathogen have been reported
 Different signaling hormones also activates the plant defense system
46
Friday, September 23, 2016
Objectives of the study
 To see the differential expression of five defense related genes namely, PR1, PR2, PR3,
PDF1.2 and NPR1 in both susceptible and moderately resistant genotypes under two
different treatments.
 Spray with conidial suspension of A. brassicae
 Exogenous application defense inducing hormones
47
Friday, September 23, 2016
Materials and methods
1. Plant material and A. brassicae inoculation
 B. juncea and S. alba plants were raised from seeds in pots containing a mixture of soil
and organic manure (2: 1)
2. Conidial suspensions were prepared by scraping mycelium from 21-day old cultures and
suspending in sterilized distilled water
48
Friday, September 23, 2016
Plant treatments
Treatments
Treatment 1: Plants
inoculation with 4-6 drops
(10ul) pathogen inoculum
Treatment 2: Spray with 2
mM SA and 100 uM JA
Pretreatment prior to
inoculation: Spray with 2 mM
SA and 100 uM JA and
Combination of SA and JA @
1mM and SA+50uM JA
49
Friday, September 23, 2016
Lists of primers used for RT-PCR
50
Friday, September 23, 2016
Results of the experiment
1. Disease Scoring
Fig: In planta challenge of B. juncea and S. alba with A. brassicae; (a) B. juncea mock control, (b and c) B. juncea- 5
days after infection with A. brassicae, (d) S. alba mock control, (e and f) S. alba- 5 days after infection with A.
brassicae
51
Friday, September 23, 2016
Results of the experiment
2. A.brassicae induced defense genes
Transcript accumulation in A. brassicae inoculated local leaves Transcript accumulation in un-inoculated distal leaves
52
Friday, September 23, 2016
Results of the experiment
3. SA and JA induced defense genes
Transcript accumulation in SA treated leaves Transcript accumulation in JA treated leaves
53
Friday, September 23, 2016
Results of the experiment
4. Effect of JA, SA and SA+JA on lesion developed by A. brassicae
Protective effect of exogenously applied SA or JA on infection by A.
brassicae in B. juncea
Protective effect of exogenously applied SA or JA on infection by A.
brassicae in S. alba
54
Friday, September 23, 2016
I can fight too with
my enemies…Come
on…lets see…
Thank you very much for
your kind attention…..
55

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Credit seminar

  • 1. Friday, September 23, 2016 CREDIT SEMINAR Topic: Molecular basis of plant defense against biotic stress Presented By: Deba Jit Das 1
  • 2. Friday, September 23, 2016 Contents of the talk  Introduction about biotic stress  Plant defense against pathogens  Plant defense against insect herbivores  Case study 2
  • 3. Friday, September 23, 2016 Plant defense against pathogens 3
  • 4. What are the challenges of plants?  Being sessile in nature, plants are exploited as a source of food and shelter by all parasites  Plants have evolved sophisticated defense mechanisms to fight against their enemies Friday, September 23, 2016 4
  • 5. How plant pathogens can be grouped???  Pathogens can be any agents that causes infections or diseases specially micro organisms  Pathogens can be of different types, such as Biotrophic: Fungus Bleumeria graminis, bacteria Xanthomonas oryzae Necrotrophic: Fungus Magnaporthe grisea Hemibiotrophics: Gray mold fungus Botrytis cinerea, bacteria Erwinia carotovora Friday, September 23, 2016 5
  • 6. Friday, September 23, 2016 What are the plant defense responses?  Hypersensitive response  Production of reactive oxygen species  Cell wall fortification  Production of antimicrobial metabolites (phytoalexins)  Defense signal transduction  Synthesis of enzymes harmful to pathogen (eg. chitinases, glucanases) 6
  • 7. Friday, September 23, 2016 How does plants defend themselves against pathogens???  Physical barrier: Leaf hairs, wax, thick cell wall, cuticle, antimicrobial compounds such as phytoalexins etc  Basal resistance or innate immune response: 1. PAMP-triggered immunity (PTI) 2. Effector Triggered Immunity (ETI)  Hyper sensitive response and activation of SAR 7
  • 8. Friday, September 23, 2016 What is basal resistance?  Triggered by trans-membrane receptors that recognize conserved molecules released by a variety of (unrelated) microbes  Include cell wall fragments, chitin or peptide motifs in bacterial flagella - PAMPs or MAMPs  PAMP- triggered immunity (PTI) (Liu et al.,2008) 8
  • 9. Friday, September 23, 2016 What are the different Receptor proteins? 9
  • 10. Friday, September 23, 2016 What are the different elicitors of pathogens??  Any substance that has the capability of activating defense responses in plants  Include components of the cell surface as well as excreted metabolites Elicitors General Race specific a) Oligosaccharide elicitors a) avr gene products b) Protein/peptide elicitors 10
  • 11. Friday, September 23, 2016 Phases of pathogen triggered immunity 11
  • 12. Friday, September 23, 2016  Flagellin Sensing 2 (FLS2) is a leucine- rich repeat receptor kinase (LRR-RK) that binds to Flg22. and confers recognition specificity.  Arabidopsis LRR-RK EFR binds bacterial EF-Tu  The tomato LRR receptor-like proteins EIX1/2 recognizes fungal xylanase.  Rice LysM domain containing receptor-like protein (RLP) CEBiP binds fungal chitin. Examples of PAMP triggered immunity 12
  • 13. Friday, September 23, 2016 What is secondary defense of plants??  Against virulence effector proteins produced by pathogens  Effector –triggered immunity (ETI)  Mediated by resistance (R) proteins 13
  • 14. Friday, September 23, 2016 Formation of active PRR complex 14
  • 15. Friday, September 23, 2016 Examples of resistance genes 15
  • 16. Friday, September 23, 2016 Models of pathogen recognition by plants  Three different models has been postulated (I) Gene for gene resistance model (a) Elicitor-Suppressor model (b) Elicitor-Receptor model (II) Guard model (III) Decoy model 16
  • 17. Friday, September 23, 2016 Gene for gene resistance model 17
  • 18. Friday, September 23, 2016 Guard and Decoy model 18
  • 19. Friday, September 23, 2016 Evidence of Guard hypothesis 19
  • 20. Friday, September 23, 2016 Molecular mechanism of plant defense against Biotrophs and Necrotrophs?? 20
  • 21. Friday, September 23, 2016 How does SA, JA ant ET activate defense responsive genes?? 21
  • 22. Friday, September 23, 2016 Plant defense against herbivores 22
  • 23. Friday, September 23, 2016 How does plants recognize herbivore attack?? Recognition of Insect Herbivore Attack Insect Oral Secretions Ovipositional Fluids 23
  • 24. Friday, September 23, 2016 What are the Herbivores associated elicitors?? 24
  • 25. Friday, September 23, 2016 How does plant react against insect Oviposition??  Insect oviposition fluids can give rise to defense responses in the plant  Many female adult herbivorous insects lay eggs directly into plants, and some species are known to perceive insects’ oviposition activities and deploy defenses responses Oviposition by Pieris brassicae causes hypersensitive response on Arabidopsis 25
  • 26. Friday, September 23, 2016 Oviposition induced plant responses against herbivores 26
  • 27. Friday, September 23, 2016 How does plants defend themselves against herbivores??  Plants produces different kinds of defensive compounds upon insect infestations  Plants releases volatile organic compounds that attract  Insect infestation leads to activation of different signaling pathways  Production of Reactive Oxygen Species (ROS) 27
  • 28. Friday, September 23, 2016 Hypersensitive response against oviposition Egg of small cabbage white butterfly, inducing hypersensitive response–like necrosis in Brassica nigra. Egg of Heliothis subflexa inducing neoplastic growth in Physalis angulata leaf. 28
  • 29. Friday, September 23, 2016 What are the changes occur in plant?? 29
  • 30. Friday, September 23, 2016 What are the different types of defense responses against herbivores?? Defense responses Direct defense Indirect defense 30
  • 31. Friday, September 23, 2016 What are the direct defense responses??  The term “direct defense” is used when plants produce physical barriers against insect herbivores, or compounds that exert repellent, antinutritive or toxic effects on the herbivores themselves  Bioactive Specialized Compounds  Hypersensitive response  Digestibility Reduction  Reallocation of Resources 31
  • 32. Friday, September 23, 2016 How does bioactive specialized compounds inhibit insect infestation? 32
  • 33. Friday, September 23, 2016 What are the digestibility reducing compounds??  Plants produce a number of defense compounds that reduce insect herbivores ability to digest the plant derived nutrients  Proteinase Inhibitors-inhibit proteases  α-amylase inhibitors-inhibit carbohydrate digestive enzymes  Lectins-binds to mebrane glycosyl group  Chitinases-disrupts gut peritrophic membrane  Polyphenol oxidases- Antinutritive enzyme 33
  • 34. Friday, September 23, 2016 Indirect defense response  The term “indirect defense” is used when plants attract, nourish or house other organisms to reduce enemy pressure.  Herbivore-induced plant volatiles  Extrafloral Nectar 34
  • 35. Friday, September 23, 2016 Herbivore induced plant volatile  Herbivore-induced plant volatiles (HIPV) can mediate indirect defenses, i.e., by attracting foraging carnivorous predators and parasitoids that kill herbivores 35
  • 36. Friday, September 23, 2016 Examples of HIPV HIPVs Plant Herbivore Natural Enemy β-caryophyllene β-ocimene Tobacco H. virescens Cardiochiles nigriceps (E)-β-farnesene (E)-caryophyllene (E)-α-bergamotene Maize S. littoralis Cotesia marginiventris (E)–4,8–dimethyl-1,3,7-nonatriene Maize M. separata Exorista japonica Cotesia kariyai linalool α-pinene 1-hexanol Maize M. separata Exorista japonica Campoletis chlorideae 36
  • 37. Friday, September 23, 2016 Extrafloral Nectar  Extrafloral nectar (EFN) appear in more than 70 plant species spanning angiosperms, gymnosperms and ferns, indicating that it is evolutionary more ancient than floral nectar  In contrast to floral nectar, used to attract pollinators, EFN is secreted on leaves and shoots to attract predators and parasitoids 37
  • 38. Friday, September 23, 2016 Extrafloral nectar as an herbivore-induced defense trait Family Species Herbivore Trait enhanced Bignoniaceae Catalpa bignonioides (Indian bean) Ceratomia catalpae (Catalpa Sphinx) Sugar content in EFN Euphorbiaceae Ricinus communis (Castor) Spodoptera littoralis EFN volume Euphorbiaceae Triadica sebifera (Chinese tallow tree) Gadirtha inexacta, and Grammodes geometrica Secretion of total solids Malvaceae Gossypium herbaceum (Cotton) Spodoptera littoralis EFN volume 38
  • 39. Friday, September 23, 2016 Mechanism of JA signaling upon insect attack?? 39
  • 40. Friday, September 23, 2016 What are the systemic response of plant against herbivores?? 40
  • 41. Friday, September 23, 2016 Regulation of defense response  Levels of jasmonic acid rise in response to herbivor damage  This hormone can trigger many types of plant defenses including bioactive compounds  The action of jasmonic acid induces the transcription of many genes involved in plant defense  Jasmonic acid turns on genes for proteinase inhibitor. 41
  • 42. Friday, September 23, 2016 JA regulated defense responsive genes 42
  • 43. Friday, September 23, 2016 JA regulated defense responsive genes 43
  • 44. Friday, September 23, 2016 Case study 44
  • 46. Friday, September 23, 2016 Introduction  Alternaria black spot (causal organism- Alternaria brassicae) an important disease of rape seed and mustard (Brassica juncea) in India  Wild relative of mustard namely Sinapis alba is known to moderately resistant against the pathogen.  Expression different types of PR-genes upon infection by the pathogen have been reported  Different signaling hormones also activates the plant defense system 46
  • 47. Friday, September 23, 2016 Objectives of the study  To see the differential expression of five defense related genes namely, PR1, PR2, PR3, PDF1.2 and NPR1 in both susceptible and moderately resistant genotypes under two different treatments.  Spray with conidial suspension of A. brassicae  Exogenous application defense inducing hormones 47
  • 48. Friday, September 23, 2016 Materials and methods 1. Plant material and A. brassicae inoculation  B. juncea and S. alba plants were raised from seeds in pots containing a mixture of soil and organic manure (2: 1) 2. Conidial suspensions were prepared by scraping mycelium from 21-day old cultures and suspending in sterilized distilled water 48
  • 49. Friday, September 23, 2016 Plant treatments Treatments Treatment 1: Plants inoculation with 4-6 drops (10ul) pathogen inoculum Treatment 2: Spray with 2 mM SA and 100 uM JA Pretreatment prior to inoculation: Spray with 2 mM SA and 100 uM JA and Combination of SA and JA @ 1mM and SA+50uM JA 49
  • 50. Friday, September 23, 2016 Lists of primers used for RT-PCR 50
  • 51. Friday, September 23, 2016 Results of the experiment 1. Disease Scoring Fig: In planta challenge of B. juncea and S. alba with A. brassicae; (a) B. juncea mock control, (b and c) B. juncea- 5 days after infection with A. brassicae, (d) S. alba mock control, (e and f) S. alba- 5 days after infection with A. brassicae 51
  • 52. Friday, September 23, 2016 Results of the experiment 2. A.brassicae induced defense genes Transcript accumulation in A. brassicae inoculated local leaves Transcript accumulation in un-inoculated distal leaves 52
  • 53. Friday, September 23, 2016 Results of the experiment 3. SA and JA induced defense genes Transcript accumulation in SA treated leaves Transcript accumulation in JA treated leaves 53
  • 54. Friday, September 23, 2016 Results of the experiment 4. Effect of JA, SA and SA+JA on lesion developed by A. brassicae Protective effect of exogenously applied SA or JA on infection by A. brassicae in B. juncea Protective effect of exogenously applied SA or JA on infection by A. brassicae in S. alba 54
  • 55. Friday, September 23, 2016 I can fight too with my enemies…Come on…lets see… Thank you very much for your kind attention….. 55