BioIT 2009 BioCatalogue slides by Carole Goble

http://www.biocatalogue.org http://beta.biocatalogue.org Professor Carole Goble University of Manchester, UK Director myGrid Consortium BioIT Alliance Lunch, 28 April 2009, Boston MA

[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Bottom Line

Why? ,[object Object],Where… can I find them? advertise? What… do they do? Can I use them? How… do they work? operational profile? up to date? Who… provides them? recommends them?

Why? ,[object Object],[object Object],Scientific Workflow Management System ,[object Object],[object Object],[object Object],http://www.taverna.org.uk

Why? ,[object Object],[object Object],Socially share, discover and reuse workflows Poster #30 http://myexperiment.org

Content ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Content ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],SOAP REST SoapLab BioMOBY DAS Beta today: 465 Services (4 REST) 2691 Soap operations 51 Providers Perpetual take-on

Curation Model Versioning Quantitative Content Tags Service Model Semantic Content Ontologies Functional Capabilities Provenance Operational Capabilities Operational Metrics Usage Policy Community Standing Ratings Usage Statistics Attribution Free text Searching Statistics Usable and Useful Understandable Controlled vocabs Interfaces

Curation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],twitter blog comments ontologies tags recommendations syndicated feeds

Curation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Today: 14902 annotations (provider, user, registries) KEGG: 1433 annotations

Open Platform ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Google Gadgets

Governance ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

When? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Who? ,[object Object],[object Object]

Why BioIT Alliance? ,[object Object],[object Object],[object Object],[object Object]

Credits Thomas Laurent Hamish McWilliams Franck Tanoh Jiten Bhagat Carole Goble Steve Pettifer Katy Wolstencroft Robert Stevens David De Roure Rodrigo Lopez Eric Nzuobontane

BioIT 2009 BioCatalogue slides by Carole Goble

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