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IOC data systems and programmes
both related to databases and
capacity development
Ward Appeltans
UNESCO-IOC
Strong scientific understanding and systematic observations of the changing world ocean climate
and ecosystems shall underpin sustainable development and global governance for a healthy
ocean, and global, regional and national management of risks and opportunities from the ocean.
UN focal point for ocean science, ocean observations
and services, data and information exchange and
capacity building
IOC
VISION
150 Member States
Established in 1960
1St Global Planning Meeting, 21-22 May 2019, Copenhagen
Let’s talk data – data – data
‱ Data will be the basic keys to realize the goals of BBNJ, if we can establish
the data value chains and data-driven solutions
‱ Tailor science and data to the needs of BBNJ
‱ Creating baselines and better understanding of ecosystem functions and services
(e.g. mesopelagic) (tipping poins and resiliency)
‱ Monitor the effects of measures/cumulative impacts – document also failures (best
practices)
‱ Regulate and monitor economic benefit (ABS)
‱ Behavioral change through education of children and early-career people,
more social science (data related to human impacts on the ocean)
‱ Role of NGOs as knowledge brokers from different sectors to connect
disciplines, sectors, institutions, and communities
‱ Make data FAIR (define what that means for us)
Open data policy
‱ “Develop, socialize, and follow an ethical compact that punishes any attempt at digital
colonialism. Treat data as public trust/public good”
‱ “Not all data is in the public domain, free of any restrictions on use, and we need to
recognize it, respect it, and operate an enterprise like ocean science within the context of
the digital knowledge economy”
‱ “Governance of data use must be looked at and mechanisms to ensure that data
producers are acknowledged or benefit from data use must be developed”
‱ “Balancing data ownership and open access in order to make as much data as possible
available, especially so that developing countries can build capacity to assess and apply
data for action, including management, policy, and environmental stewardship”
‱ “Much of the data we collect is poorly used or unused. “Leave no datum behind”. More
training to know where the data is and how to use it”
‱ “Foster synthesis working groups that bring science, business, policy, and civil society
together in creative problem-solving spaces. Promote investment in synthesis centers
that have the methodology and infrastructure working to support these ventures”
Avoid being behind the wave of innovation
‱ “The idea of the one-stop shop for data is dead. Don’t try to resurrect
dead technologies. Instead, promote the implementation of principles
and techniques that project good metadata from data repositories
onto the web and use the web as it was intended to be used (linked
data)”. Use a platform for data sharing and use (PaaS principle).
‱ “Focus on building the unique knowledge of the ocean science
community into ontologies (building on what’s already been started -
BODC, etc.) to aid in the semantic part of interoperability”
8
oceanbestpractices.org
697
The ODIS "Catalogue of Sources" aims to
be an online browsable and searchable
catalogue of existing ocean related web-
based sources/systems of data and
information as well as products and
services. It will also provide information
on products and visualize the landscape
(entities and their connections) of ocean
data and information sources.
https://catalogue.odis.org/
Expert and institute profiles
Events calendar (=> alumni system)
Projects
Country profiles
Experts (15120)
Institutions (5108)
OceanExpert
https://oceanexpert.net/
Expert and institute profiles
Events calendar (=> alumni system)
Projects
Country profilesOceanExpert
2219 events
OBIS has trained 330 experts from 72 countries in 20
training courses.
www.oceanteacher.org
> 2800 people trained in total
from 134 Member States
> 5 200 registered users
> 220 training courses
(English, Spanish, French, Portuguese)
Learning Services Provider
Belgium
China
Colombia
India
Iran
Kenya
Malaysia
Mozambique
Senegal
9 Regional Training Centres
0
100
200
300
400
500
600
Training Course Participants and Countries’
Participation 2002 - 2019
Training efforts Countries
Last 12 months,
191 people
trained in 8 OBIS
training courses
Capacity development through training
https://obis.org/Ocean
Biogeographic
Information
System
Provide the world's largest scientific
knowledge base on the diversity,
distribution and abundance of all
marine organisms in an integrated and
standardized format
OBISNODESNETWORK
OBISNODESNETWORK
Developing international standards and data exchange protocols
Developing international standards and data exchange protocols
Data portal
Data portal Deep-sea records in OBIS (>500m)
Data portal Deep-sea records in OBIS (>500m)
Data portal
Smithsonian Institution,
National Museum of
Natural History,
Department of
Invertebrate Zoology
OBIS 2.0
OBIS-ENV-DATA
List of events: Cruise planning
List of events: track and trace
Links to external repositories
observatories
Register
(e.g. GeOMe)
Sequence Read
Archive
(SRA)
GenBank/EBI
(reference)
OBISRaw -> OTU -> OBIS compatible
file
applications
A repository for field and sampling event metadata associated
with genetic samples
common
practices –
bioinformatics
Integrated Ocean eObservatory
Quality control
API
Supporting international processes
The 27th IOC Assembly (2015) encouraged increased
participation of IOC in the work of IPBES through OBIS and
other relevant IOC programmes (IOC-XXVIII/Dec.6.1).
Supporting international processes
OBIS contributed to 3 chapters of the first World Ocean
Assessment, and at the IOC Assembly, the coordinator
explicitly asked IOC, through OBIS and other programmes,
to support the WOA-2
Supporting international processes
CBD decision X/29, para 35
Requests ... UNESCO-IOC, in particular the Ocean Biogeographic Information System (OBIS), .. and
others... to facilitate availability and inter-operability of the best available marine and coastal
biodiversity data sets and information across global, regional and national scales. Data portal

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IOC Data systems and capacity development related to BBNJ, MGR workshop 21-22 May 2019, Brussels

  • 1. IOC data systems and programmes both related to databases and capacity development Ward Appeltans UNESCO-IOC
  • 2. Strong scientific understanding and systematic observations of the changing world ocean climate and ecosystems shall underpin sustainable development and global governance for a healthy ocean, and global, regional and national management of risks and opportunities from the ocean. UN focal point for ocean science, ocean observations and services, data and information exchange and capacity building IOC VISION 150 Member States Established in 1960
  • 3. 1St Global Planning Meeting, 21-22 May 2019, Copenhagen
  • 4. Let’s talk data – data – data ‱ Data will be the basic keys to realize the goals of BBNJ, if we can establish the data value chains and data-driven solutions ‱ Tailor science and data to the needs of BBNJ ‱ Creating baselines and better understanding of ecosystem functions and services (e.g. mesopelagic) (tipping poins and resiliency) ‱ Monitor the effects of measures/cumulative impacts – document also failures (best practices) ‱ Regulate and monitor economic benefit (ABS) ‱ Behavioral change through education of children and early-career people, more social science (data related to human impacts on the ocean) ‱ Role of NGOs as knowledge brokers from different sectors to connect disciplines, sectors, institutions, and communities ‱ Make data FAIR (define what that means for us)
  • 5. Open data policy ‱ “Develop, socialize, and follow an ethical compact that punishes any attempt at digital colonialism. Treat data as public trust/public good” ‱ “Not all data is in the public domain, free of any restrictions on use, and we need to recognize it, respect it, and operate an enterprise like ocean science within the context of the digital knowledge economy” ‱ “Governance of data use must be looked at and mechanisms to ensure that data producers are acknowledged or benefit from data use must be developed” ‱ “Balancing data ownership and open access in order to make as much data as possible available, especially so that developing countries can build capacity to assess and apply data for action, including management, policy, and environmental stewardship” ‱ “Much of the data we collect is poorly used or unused. “Leave no datum behind”. More training to know where the data is and how to use it” ‱ “Foster synthesis working groups that bring science, business, policy, and civil society together in creative problem-solving spaces. Promote investment in synthesis centers that have the methodology and infrastructure working to support these ventures”
  • 6. Avoid being behind the wave of innovation ‱ “The idea of the one-stop shop for data is dead. Don’t try to resurrect dead technologies. Instead, promote the implementation of principles and techniques that project good metadata from data repositories onto the web and use the web as it was intended to be used (linked data)”. Use a platform for data sharing and use (PaaS principle). ‱ “Focus on building the unique knowledge of the ocean science community into ontologies (building on what’s already been started - BODC, etc.) to aid in the semantic part of interoperability”
  • 7.
  • 9. The ODIS "Catalogue of Sources" aims to be an online browsable and searchable catalogue of existing ocean related web- based sources/systems of data and information as well as products and services. It will also provide information on products and visualize the landscape (entities and their connections) of ocean data and information sources. https://catalogue.odis.org/
  • 10. Expert and institute profiles Events calendar (=> alumni system) Projects Country profiles Experts (15120) Institutions (5108) OceanExpert https://oceanexpert.net/
  • 11. Expert and institute profiles Events calendar (=> alumni system) Projects Country profilesOceanExpert 2219 events OBIS has trained 330 experts from 72 countries in 20 training courses.
  • 12. www.oceanteacher.org > 2800 people trained in total from 134 Member States > 5 200 registered users > 220 training courses (English, Spanish, French, Portuguese) Learning Services Provider Belgium China Colombia India Iran Kenya Malaysia Mozambique Senegal 9 Regional Training Centres 0 100 200 300 400 500 600 Training Course Participants and Countries’ Participation 2002 - 2019 Training efforts Countries
  • 13. Last 12 months, 191 people trained in 8 OBIS training courses Capacity development through training
  • 14. https://obis.org/Ocean Biogeographic Information System Provide the world's largest scientific knowledge base on the diversity, distribution and abundance of all marine organisms in an integrated and standardized format
  • 17. Developing international standards and data exchange protocols
  • 18. Developing international standards and data exchange protocols
  • 20. Data portal Deep-sea records in OBIS (>500m)
  • 21. Data portal Deep-sea records in OBIS (>500m)
  • 22. Data portal Smithsonian Institution, National Museum of Natural History, Department of Invertebrate Zoology
  • 23. OBIS 2.0 OBIS-ENV-DATA List of events: Cruise planning List of events: track and trace Links to external repositories
  • 24. observatories Register (e.g. GeOMe) Sequence Read Archive (SRA) GenBank/EBI (reference) OBISRaw -> OTU -> OBIS compatible file applications A repository for field and sampling event metadata associated with genetic samples common practices – bioinformatics Integrated Ocean eObservatory Quality control API
  • 25.
  • 26. Supporting international processes The 27th IOC Assembly (2015) encouraged increased participation of IOC in the work of IPBES through OBIS and other relevant IOC programmes (IOC-XXVIII/Dec.6.1).
  • 27. Supporting international processes OBIS contributed to 3 chapters of the first World Ocean Assessment, and at the IOC Assembly, the coordinator explicitly asked IOC, through OBIS and other programmes, to support the WOA-2
  • 28. Supporting international processes CBD decision X/29, para 35 Requests ... UNESCO-IOC, in particular the Ocean Biogeographic Information System (OBIS), .. and others... to facilitate availability and inter-operability of the best available marine and coastal biodiversity data sets and information across global, regional and national scales. Data portal

Hinweis der Redaktion

  1. This project only recently started and so far has documented 590 best practices. These manuals and guides are linked to 6 terminologies. This semantically enhances the records and makes it easier to classify and as such retrieve the right information.
  2. Last week, IODE launched the prototype of the Ocean Data and Information System (ODIS) which is a catalogue of web-based sources of data and information systems. A lot of the data is still scattered in many national or regional data systems. ODIS aims to make it easier to discover them.  The ODIS Concept Statement The IOC Ocean Data and Information System (ODIS) will be an e-environment where users can discover data, information and associated products or services provided by Member States, projects and other partners associated with IOC. IODE will work with existing stakeholders, linked and not linked to the IOC, to improve the accessibility and interoperability of existing data and information, and to contribute to the development of a global ocean data and information system, to be referred to as the IOC Ocean Data and Information System, leveraging established solutions where possible.
  3. The IOC list of experts is called “OceanExpert” and currently has over 15,000 persons and 5,100 institutions. OceanExpert is also used to manage events, projects and country profiles.
  4. OceanExpert is API driven, which means that third-party applications can easily access the information via webservices and build tools using the information in OceanExpert. OBIS for example is making use of the OceanExpert API to maintain its alumni list of trainees per country, making use of the events calendar. The participants need to create an account in OceanExpert and provide information on their expertise. Their account is linked to the training events. So far, OBIS has trained 330 experts from 7 countries in 20 training courses.
  5. OceanExpert is also the platform to manage country profiles for the IOC Global Ocean Science Report. GOSR could be further tailored to support BBNJ in assessing the capacity of Member States in ABNJ. Some information is already useful, such as the number of Research Vessels (and their size indicates whether they can operate in international waters)
  6. Being part of IOC, Capacity Development is an important activity in OBIS. Scientists and data managers are trained in contributing data to OBIS as well as use data from OBIS for research.
  7. In contrast to ODIS, OBIS does harvest and integrate the actual data from over 2,700 databases from all over the world, into a central database. It currently has 55 million observations of 121,000 marine species. Two weeks ago OBIS launched its completely new infrastructure, OBIS2.0 OBIS is a project of IODE under IOC and the secretariat is based in Belgium. There are currently 2 people working at the secretariat (a manager and a technical data manager/IT developer).
  8. However, a lot of the work is done by the 60 people working at the national, regional or thematic OBIS nodes. The OBIS nodes are responsible for the local networking, formating and quality control of the data, so that OBIS can seamlessly harvest the data from those nodes. 8 new OBIS nodes were established in the last 2 years, so the network is growing. However, only 1/3 of them have their resources secured for 2019-2020. For the sustainability of OBIS, it is very important that countries not only provide core funding for the OBIS secretariat, but also to its national OBIS nodes.
  9. However, a lot of the work is done by the 60 people working at the national, regional or thematic OBIS nodes. The OBIS nodes are responsible for the local networking, formating and quality control of the data, so that OBIS can seamlessly harvest the data from those nodes. 8 new OBIS nodes were established in the last 2 years, so the network is growing. However, only 1/3 of them have their resources secured for 2019-2020. For the sustainability of OBIS, it is very important that countries not only provide core funding for the OBIS secretariat, but also to its national OBIS nodes.
  10. OBIS is also active in developing international standards and data exchange protocols, such as this meeting we organized in April last year, where the major animal tracking networks agreed to share the detection locations of tagged animals (e.g. fish, crustacea, mammals etc) with OBIS.
  11. Here is an example of the definitions of the data terms.
  12. As I said, OBIS launched its new portal recently. You can find statistics for areas, such as EEZs, IHO sea areas, Large Marine Ecosystems, EBSAs, but also ABNJ. 3% of the datasets only holds data from ABNJ and interestingly 26% of the datasets hold data both in EEZ and ABNJ, so cross the EEZ boundary. 71% of the datasets do not hold data from ABNJ. 4% or more than 5000 species occur exclusively in ABNJ, and 16% occur in both EEZs and ABNJ, and 80% occur only in EEZ.
  13. The new powerful mapper provides tools to visualize, filter and download the data in excel. For example, this is a map showing the 1.5 million deep-sea records in OBIS of which 360,000 are in ABNJ (red). Here deep-sea means all records with a sampling depth below 500m.
  14. This is the same map, zoomed in on the N-W Atlantic and with a different base layer.
  15. OBIS also provides information on species level, such as this deepsea shrimp for which OBIS provides 79 occurrences integrated from 7 different datasets.
  16. The Genomic Observatories Metadatabase (GeOMe)
  17. OBIS is called upon to support several international processus, such as the Intergovernmental Science-Policy Platform on Biodiversity and Ecosystem Services (IPBES). OBIS has provided statistics and maps for the regional and global assessments.
  18. OBIS data was used in 3 chapters of the first UN World Ocean Assessment and is currently supporting authors of the 2nd cycle.
  19. OBIS is one of the important information sources for the identification of EBSAs. And the OBIS portal provides summary statistics for all of the approved EBSAs.