Mike Hucka
31 SlideShares 23 Followers 33 Folgens
Personal Information
Unternehmen/Arbeitsplatz
Greater Los Angeles Area United States
Beruf
Staff, California Institute of Technology Library
Branche
Technology / Software / Internet
Webseite
www.cds.caltech.edu/~mhucka
Info
ORCID: 0000-0001-9105-5960 – I've worked in many areas: cognitive science, artificial intelligence, computational neuroscience, computational biology, and recently, library information technology. My work has focused on the development of software standards and infrastructure for scientific computing. I co-developed and led to prominence today's most widely-used format for representing computational models in systems biology, the Systems Biology Markup Language (SBML). Along the way, I also co-founded BioModels.net, the Systems Biology Graphical Notation (SBGN), the Systems Biology Ontology (SBO), BioModels Database, and the COMBINE (Computational Modeling in Biology Network) community.
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sbml computational modeling xml systems biology standards free software biology file formats data formats software file format biotechnology simulation biomedical research biomodels database library-management library cdl controlled digital lending search software development sed-ml multiscale modeling biomedical data analysis reproducible science reproducibility semantic web
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Software for SBML Today

Vor 11 Jahren • 610 Aufrufe

SBML: What Is It About?

Vor 11 Jahren • 991 Aufrufe

General updates about SBML and SBML Team activities

Vor 11 Jahren • 256 Aufrufe

SBML (the Systems Biology Markup Language)

Vor 11 Jahren • 1780 Aufrufe

Finding common ground between modelers and simulation software in systems biology

Vor 11 Jahren • 674 Aufrufe

SBML (the Systems Biology Markup Language), BioModels Database, and related resources

Vor 11 Jahren • 1580 Aufrufe

SBML and related resources 
and standardization efforts

Vor 11 Jahren • 1737 Aufrufe

Retrospective about SBML on the occasion of the 10th Anniversary of SBML

Vor 11 Jahren • 1494 Aufrufe

A Profile of Today's SBML-Compatible Software

Vor 11 Jahren • 372 Aufrufe

SBML (the Systems Biology Markup Language), model databases, and other resources

Vor 11 Jahren • 1636 Aufrufe

A status update on COMBINE standardization activities, with a focus on SBML

Vor 11 Jahren • 554 Aufrufe

Creating a new language to support open innovation

Vor 10 Jahren • 605 Aufrufe

Systems Biology Systems

Vor 10 Jahren • 2248 Aufrufe

A new language for a new biology: How SBML and other tools are transforming models of life

Vor 10 Jahren • 577 Aufrufe

Computational Approaches to Systems Biology

Vor 10 Jahren • 2351 Aufrufe

Recent developments in the world of SBML (the Systems Biology Markup Language)

Vor 10 Jahren • 1992 Aufrufe

Update on SBML for Tuesday Sep. 17 (COMBINE 2013)

Vor 10 Jahren • 377 Aufrufe

Reproducibility of computational research: methods to avoid madness (Session introduction)

Vor 9 Jahren • 816 Aufrufe

Standards and software: practical aids for reproducibility of computational research 
in systems biology

Vor 9 Jahren • 965 Aufrufe

SBML (the Systems Biology Markup Language)

Vor 9 Jahren • 1785 Aufrufe

Some SBML-related resources at SBML.org

Vor 9 Jahren • 588 Aufrufe

What is "COMBINE"?

Vor 9 Jahren • 588 Aufrufe

Recent Developments in SBML

Vor 9 Jahren • 619 Aufrufe

A summary of various COMBINE standardization activities

Vor 9 Jahren • 696 Aufrufe

Introduction to Satellite Meeting on Overview and Use of Standards and Formats Relevant to MSM

Vor 8 Jahren • 427 Aufrufe

Brief Review of Common Modeling Formalisms and Representation Approaches

Vor 8 Jahren • 536 Aufrufe

SBML, SBML Packages, SED-ML, 
 COMBINE Archive, and more

Vor 8 Jahren • 1558 Aufrufe

Recent software and services to support the SBML community

Vor 7 Jahren • 573 Aufrufe

Finding the right wheel

Vor 7 Jahren • 480 Aufrufe

Caltech DIBS: Digital Borrowing System

Vor 2 Jahren • 221 Aufrufe

Dokumente

(1)

Common ground between modelers and simulation software: the Systems Biology Markup Language (SBML)

Vor 11 Jahren • 211 Aufrufe

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Enabling Personal Use of Web Archives

Michele Weigle • Vor 5 Jahren
Personal Information
Unternehmen/Arbeitsplatz
Greater Los Angeles Area United States
Beruf
Staff, California Institute of Technology Library
Branche
Technology / Software / Internet
Webseite
www.cds.caltech.edu/~mhucka
Info
ORCID: 0000-0001-9105-5960 – I've worked in many areas: cognitive science, artificial intelligence, computational neuroscience, computational biology, and recently, library information technology. My work has focused on the development of software standards and infrastructure for scientific computing. I co-developed and led to prominence today's most widely-used format for representing computational models in systems biology, the Systems Biology Markup Language (SBML). Along the way, I also co-founded BioModels.net, the Systems Biology Graphical Notation (SBGN), the Systems Biology Ontology (SBO), BioModels Database, and the COMBINE (Computational Modeling in Biology Network) community.
Tags
sbml computational modeling xml systems biology standards free software biology file formats data formats software file format biotechnology simulation biomedical research biomodels database library-management library cdl controlled digital lending search software development sed-ml multiscale modeling biomedical data analysis reproducible science reproducibility semantic web
Mehr anzeigen