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Research Data-DOI Experiment in
Japanese DOI Registration Agency
(Japan Link Center, JaLC)
Hideaki Takeda
National Institute of Informatics
(Joint Steering Committee Chair, Japan Link Center)
takeda@nii.ac.jp
ORCID: 0000-0002-2909-7163
Talk at CODATA-ICSTI Data Citation Workshop, October 29, 2015
Repository
Architecture of data sharing
Identifier
Data
Format
Metadata
Metadata Schema
Systematic Integration across the layers
Interoperability on each layer
Metadata Description Language, Collectoin and sharing, Conversion
ス Schema Description Language, collection and sharing, conversion
System Development, Community
管理 Organization, systems, ID federation
Repository
Architecture of data sharing
Identifier
Data
Format
Metadata
Metadata Schema
DOI ORCID FundRef
DataCite CrossRef JaLC Dublin Core DCAT CKAN Linked Data
Organization Schema System Technology
Coordination and Competition
Dspace Fedora Weko
DOI
ç√ç√
ス
管理
Repository
DOI in Architecture of Data Sharing
Identifier
Data
Format
Metadata Schema
DOI
DataCite Metadata Schema
JaLC Metadata Schema
JaLC DataCite
Metadata
Members (data providers)
Domain-specific
metadata schemata
DOI (Digital Object Identifier)
• Service to translate DOI names to URIs
containing digital objects
• Service managed by International DOI
Foundation (IDF)
• Initially started by STM publishers to share
identifiers for digital publications
• Distributed management
– Delegation of registration tasks to Registration
Agencies (RAs)
DOI (Digital Object Identifier)
• Service to translate DOI names to URIs
containing digital objects
doi: 10.1007/978-3-642-21616-9_30
http://www.springerlink.com/content
/xkj2386758245u85/
DOI URL
http://doi.org/10.1007/978-3-642-
21616-9_30
http://www.springerlink.com/content
/xkj2386758245u85/
DOI as URL URL
Management Structure of DOI
• There Layers: International DOI Foundation (IDF), Registration
Agency (RA), members
• RAs contributes to IDF by registration to Registry DBs,
management of Registry DBs, and members fees
• RAs offers services for DOI registration to their members
• Members can register DOIs to their digital objects through
RAs
Members
RAs
IDF
CrossRef
PublishersPublishersPublishers Publishers
DataCite
UniversityLibrary
Research
Institute
JaLC
PublisherUniversity
Academic
Society
Roles of DOI
• Provide resolvable, persistent, interoperable
links
– Resolvable: standard syntax + mapping by handle
system
– Persistent
• Technically: management of registry DBs
• Socially: organizational operations and duties for
members
– Interoperability: sharing datamodel
Registration Agencies (RAs)
Airiti, Inc. CrossRef
China National Knowledge
Infrastructure (CNKI)
DataCite
EIDR (Entertainment Identifier
Registry)
ISTIC (The Institute of
Scientific and Technical
Information of China)
JaLC (Japan Link Center)
mEDRA (Multilingual European
DOI Registration Agency)
OP (Publications Office of the European Union)
CrossRef
• Ensure accessibility and citation of articles and
books in STM publications
• Started in 1999
• Largest and oldest RA of IDF
– Most of DOI registered are via CrossRef
– Members over 70 countries, most are publishers
• Functions
– DOI Registration
– Metadata Management
• Bibliographic metadata
• Citation
– Services with metadata
• Search for bibliographic metadata and citation
• Reverse look up
DataCite
• IDF RA for research data
• a not-for-profit organization since 1 December
2009
Japan Link Center (JaLC)
• Founded in March 2012
• Aimed to register DOIs for academic contents produced
in Japan or in Japanese, to circulate information in Japan and overseas.
• Controlled by four national organizations:
 Japan Science and Technology Agency (JST)
 National Institute for Materials Science (NIMS)
 National Institute of Informatics (NII)
 National Diet Library (NDL)
• Operated by JST
• Membership system (Academic societies, Publishers, University libraries,
etc)
– 24 Members, 950 Associate members
• External coordination
JaLC is a member of CrossRef and DataCite(Mar. 2014)
13
Over 1,300,000 DOI registered
340,000
440,000
540,000
640,000
740,000
840,000
940,000
2013,3 2013,5 2013,7 2013,9 2013,11 2014,1 2014,3 2014,5 2014,7
JaLC DOI
1,440,000
1,455,000
1,470,000
1,485,000
1,500,000
1,515,000
1,530,000
1,545,000
1,560,000
1,575,000
1,590,000
2012,12 2013,3 2013,6 2013,9 2013,12 2014,3 2014,6
CrossRef DOI
Total amount of DOIs: 2,427,391 (at the end of July 2014)
※ J-STAGE Article:90,000+ 200,000 (JaLC DOI)
+20,000 (CrossRef DOI)
(Collective registration for the articles which had not been registered DOI)
※National Diet Library’s Doctoral Thesis:140,000
(via JaLC)
Number of DOIs
14
Content categories
15
Category
Journal articles
Journal articles Dec.2012 -
University bulletins Sep.2014 -
Conference proceedings Mar.2012 -
Books
Books Jan.2015 -
Doctoral theses Mar.2014 -
Reports
Technical reports Jan.2015 -
Governmental reports Jan.2015 -
Research data Jan.2015 -
e-learning resources Jan.2015 -
Data
DOI Registration Flow
16
DOI
IDF
DOI
DOI
Article
CrossRef DOI
+CrossRef Matadata
- JaLC
- CrossRef
- DataCite
Metadata
DOI
DOI
+Article Matadata
DOI
+Data Metadata
DataCite DOI
+DataCite Metadata
JaLC
Mem.
No Contents type Additional Metadata External Deposit
1 Journal Article journal name, ISSN, volume, number, title,
page, etc.
CrossRef
2 Book series title, chapter , ISBN, etc. CrossRef
3 Research Data size, geolocation, rights, signature, etc. DataCite
4 E-learning Learning Resource type, rights, etc.
5 Other (Basic metadata only)
Basic metadata:
DOI, URL, title, author information, affiliation, researcher id,
publication date, publisher, edition, related contents, funder
Metadata Schemata
Experiment Project
to register DOIs for Research Data
• Goal
− Establish operation flows to register DOIs for
research data
• Objectives
− Set policies in registering DOIs for research data
− Establish operation flows to register DOIs for
research data with JaLC system.
− Test Data DOI registrations
− October 2014 – October 2015
18
Project Organization
Steering
Committee
Project
Manager
Sub
Manager
Participant Participant Participant
Technical
advisory
Secretariat
Report
<-Support
Support ->
Participants are supposed to be research institutes, universities, etc.
and chosen by public invitation.
Hideaki Takeda (NII)
Yasuhiro Murayama (NICT)
Members of the project
9 projects with 14 organizations
Members of the project
• National Bioscience Database Center (NBDC), Japan Science and Technology
Agency (JST)
• National Institute of Polar Research (NIPR)
• National Institute of Informatics (NII)
• DIAS-P Project (National Institute of Informatics (NII))
– Japan Agency for Marine-Earth Science and Technology (JAMSTEC)
– University of Tokyo
– Kyoto University
– National Institute for Environmental Studies (NIES)
• National Institute of Advanced Industrial Science and Technology (AIST)
• National Institute of Information and Communications Technology (NICT)
– Kyoto University
– National Institute of Informatics (NII)
– InfoProto Co.,Ltd.
– Japan Aerospace Exploration Agency (JAXA)
– National Institute of Polar Research (NIPR)
• Chiba University Library
• National Institute for Materials Science (NIMS)
• Neuroinformatics Japan Center, Brain Science Institute (BSI), RIKEN
2014 2015
AUG SEP OCT NOV DEC JAN FEB MAR APR MAY JUN JUL AUG SEP OCT
Schedule
Public invitation
for the project
Meeting
Design of experiments
Test of DOI Registration
DOI registration
Interim report Final report
Study Mtg. Outreach Mtg. Mid-term
Report Mtg.
Issues in Data DOI
• Flow of operations
• Persistent access
• Granularity of data in registration
• Dynamics of data
• Landing page
• Quantity of data
• Applications
23
Issues in Data DOI
• Flow of operations: Who, When, How
− Who registers data?: Researcher/Project
manager/Librarian
− When is data registered?
− How is metadata provided for data?
• Persistent access
− What persistency can we expect for data?
− Can time-limited projects participate? Who will ensure the
persistency of the data?
(ex.)
The representative institute takes over all of the data
Registering DOIs only for data managed by real organizations
among the members of the project
24
ID
metadata
Data
Register
Create Register Modify
saveCreate publish Modify remove
Researcher
PublisherPublisher
Life cycle of data and stakeholders
- in case of literature -
25
ID
metadata
Data
Register
Create Register Modify
saveCreate publish Modify remove
Researcher
LibraryInstitutional Repository
Life cycle of data and stakeholders
- in case of literature -
26
ID
metadata
Data
Register
Create Register Modify
saveCreate publish Modify remove
Life cycle of data and stakeholders
- in case of data -
27
Create Register Modify
Researcher
Library Research Institution
Project
JaLC
Metadata
Domain
Metadata
Issues in Data DOI
• Persistent access
− What persistency can we expect for data?
− Can time-limited projects participate? Who will
ensure the persistency of the data?
(ex.)
The representative institute takes over all of the data
Registering DOIs only for data managed by real
organizations among the members of the project
28
Projects and Institutions
• Research project may consist on members
from multiple institutes
Articles
Research
Data
Members
Associate
Members
Project Q
ZZ Univ.XX Univ. YY Univ.
Y Univ. Z Univ.X Society
XX Society YY Society ZZ Society
A Res. Inst.
Issues in Data DOI (cont’d)
• Granularity of data in registration
– Some aspects for granularity of data
• Good for citation
• Granularity of data itself
– Observation data/Experiment data/Simulation data
• Easy for access
• Easy for management
• Quantity of data
30
Issues in Data DOI (cont’d)
• Dynamics of data
− Adding data after registration of DOI
− Some options:
− Different DOIs
− Add relationship metadata to denote the relation to the original
DOIs
− Use the original DOI
− Versioning: add the link to the new data while keep the link to the
original data
− History of changes in the single DOI
− No descriptions (e.g., data in observing)
31
Issues in Data DOI (cont’d)
• Landing page
− Metadata description
− For open/closed data
• Quantity of data
− Registering DOI for a large amount of data
• Applications
− Citing DOIs for research data
− Developing other applications
32
Recommendations for Data DOIs
• Recognition of variety of the nature of data
• Minimal Commitment
– Persistency, Interoperability, Usability,
manageability
• Design own “DOI Registration Policy”
– Along with Institutional “Data Management
Policy”
– Define/recommend rules of
DOI registrations on these issues.
• Flow of operations
• Persistent access
• Granularity of data
in registration
• Dynamics of data
• Landing page
• Quantity of data
• …
Summary
• Data-sharing architecture
– Interoperability should be guaranteed
– Layers
• ID/Metadata Schema/Metadata/Data
format/Data/Repository
– Cooperation and Competition
• DOI is the promising ID for data but different
in use from one for literature
– DOI Registration Policy is needed

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Research Data-DOI Experiment in Japanese DOI Registration Agency (Japan Link Center, JaLC)

  • 1. Research Data-DOI Experiment in Japanese DOI Registration Agency (Japan Link Center, JaLC) Hideaki Takeda National Institute of Informatics (Joint Steering Committee Chair, Japan Link Center) takeda@nii.ac.jp ORCID: 0000-0002-2909-7163 Talk at CODATA-ICSTI Data Citation Workshop, October 29, 2015
  • 2. Repository Architecture of data sharing Identifier Data Format Metadata Metadata Schema Systematic Integration across the layers Interoperability on each layer
  • 3. Metadata Description Language, Collectoin and sharing, Conversion ス Schema Description Language, collection and sharing, conversion System Development, Community 管理 Organization, systems, ID federation Repository Architecture of data sharing Identifier Data Format Metadata Metadata Schema DOI ORCID FundRef DataCite CrossRef JaLC Dublin Core DCAT CKAN Linked Data Organization Schema System Technology Coordination and Competition Dspace Fedora Weko
  • 4. DOI
  • 5. ç√ç√ ス 管理 Repository DOI in Architecture of Data Sharing Identifier Data Format Metadata Schema DOI DataCite Metadata Schema JaLC Metadata Schema JaLC DataCite Metadata Members (data providers) Domain-specific metadata schemata
  • 6. DOI (Digital Object Identifier) • Service to translate DOI names to URIs containing digital objects • Service managed by International DOI Foundation (IDF) • Initially started by STM publishers to share identifiers for digital publications • Distributed management – Delegation of registration tasks to Registration Agencies (RAs)
  • 7. DOI (Digital Object Identifier) • Service to translate DOI names to URIs containing digital objects doi: 10.1007/978-3-642-21616-9_30 http://www.springerlink.com/content /xkj2386758245u85/ DOI URL http://doi.org/10.1007/978-3-642- 21616-9_30 http://www.springerlink.com/content /xkj2386758245u85/ DOI as URL URL
  • 8. Management Structure of DOI • There Layers: International DOI Foundation (IDF), Registration Agency (RA), members • RAs contributes to IDF by registration to Registry DBs, management of Registry DBs, and members fees • RAs offers services for DOI registration to their members • Members can register DOIs to their digital objects through RAs Members RAs IDF CrossRef PublishersPublishersPublishers Publishers DataCite UniversityLibrary Research Institute JaLC PublisherUniversity Academic Society
  • 9. Roles of DOI • Provide resolvable, persistent, interoperable links – Resolvable: standard syntax + mapping by handle system – Persistent • Technically: management of registry DBs • Socially: organizational operations and duties for members – Interoperability: sharing datamodel
  • 10. Registration Agencies (RAs) Airiti, Inc. CrossRef China National Knowledge Infrastructure (CNKI) DataCite EIDR (Entertainment Identifier Registry) ISTIC (The Institute of Scientific and Technical Information of China) JaLC (Japan Link Center) mEDRA (Multilingual European DOI Registration Agency) OP (Publications Office of the European Union)
  • 11. CrossRef • Ensure accessibility and citation of articles and books in STM publications • Started in 1999 • Largest and oldest RA of IDF – Most of DOI registered are via CrossRef – Members over 70 countries, most are publishers • Functions – DOI Registration – Metadata Management • Bibliographic metadata • Citation – Services with metadata • Search for bibliographic metadata and citation • Reverse look up
  • 12. DataCite • IDF RA for research data • a not-for-profit organization since 1 December 2009
  • 13. Japan Link Center (JaLC) • Founded in March 2012 • Aimed to register DOIs for academic contents produced in Japan or in Japanese, to circulate information in Japan and overseas. • Controlled by four national organizations:  Japan Science and Technology Agency (JST)  National Institute for Materials Science (NIMS)  National Institute of Informatics (NII)  National Diet Library (NDL) • Operated by JST • Membership system (Academic societies, Publishers, University libraries, etc) – 24 Members, 950 Associate members • External coordination JaLC is a member of CrossRef and DataCite(Mar. 2014) 13 Over 1,300,000 DOI registered
  • 14. 340,000 440,000 540,000 640,000 740,000 840,000 940,000 2013,3 2013,5 2013,7 2013,9 2013,11 2014,1 2014,3 2014,5 2014,7 JaLC DOI 1,440,000 1,455,000 1,470,000 1,485,000 1,500,000 1,515,000 1,530,000 1,545,000 1,560,000 1,575,000 1,590,000 2012,12 2013,3 2013,6 2013,9 2013,12 2014,3 2014,6 CrossRef DOI Total amount of DOIs: 2,427,391 (at the end of July 2014) ※ J-STAGE Article:90,000+ 200,000 (JaLC DOI) +20,000 (CrossRef DOI) (Collective registration for the articles which had not been registered DOI) ※National Diet Library’s Doctoral Thesis:140,000 (via JaLC) Number of DOIs 14
  • 15. Content categories 15 Category Journal articles Journal articles Dec.2012 - University bulletins Sep.2014 - Conference proceedings Mar.2012 - Books Books Jan.2015 - Doctoral theses Mar.2014 - Reports Technical reports Jan.2015 - Governmental reports Jan.2015 - Research data Jan.2015 - e-learning resources Jan.2015 -
  • 16. Data DOI Registration Flow 16 DOI IDF DOI DOI Article CrossRef DOI +CrossRef Matadata - JaLC - CrossRef - DataCite Metadata DOI DOI +Article Matadata DOI +Data Metadata DataCite DOI +DataCite Metadata JaLC Mem.
  • 17. No Contents type Additional Metadata External Deposit 1 Journal Article journal name, ISSN, volume, number, title, page, etc. CrossRef 2 Book series title, chapter , ISBN, etc. CrossRef 3 Research Data size, geolocation, rights, signature, etc. DataCite 4 E-learning Learning Resource type, rights, etc. 5 Other (Basic metadata only) Basic metadata: DOI, URL, title, author information, affiliation, researcher id, publication date, publisher, edition, related contents, funder Metadata Schemata
  • 18. Experiment Project to register DOIs for Research Data • Goal − Establish operation flows to register DOIs for research data • Objectives − Set policies in registering DOIs for research data − Establish operation flows to register DOIs for research data with JaLC system. − Test Data DOI registrations − October 2014 – October 2015 18
  • 19. Project Organization Steering Committee Project Manager Sub Manager Participant Participant Participant Technical advisory Secretariat Report <-Support Support -> Participants are supposed to be research institutes, universities, etc. and chosen by public invitation. Hideaki Takeda (NII) Yasuhiro Murayama (NICT)
  • 20. Members of the project 9 projects with 14 organizations
  • 21. Members of the project • National Bioscience Database Center (NBDC), Japan Science and Technology Agency (JST) • National Institute of Polar Research (NIPR) • National Institute of Informatics (NII) • DIAS-P Project (National Institute of Informatics (NII)) – Japan Agency for Marine-Earth Science and Technology (JAMSTEC) – University of Tokyo – Kyoto University – National Institute for Environmental Studies (NIES) • National Institute of Advanced Industrial Science and Technology (AIST) • National Institute of Information and Communications Technology (NICT) – Kyoto University – National Institute of Informatics (NII) – InfoProto Co.,Ltd. – Japan Aerospace Exploration Agency (JAXA) – National Institute of Polar Research (NIPR) • Chiba University Library • National Institute for Materials Science (NIMS) • Neuroinformatics Japan Center, Brain Science Institute (BSI), RIKEN
  • 22. 2014 2015 AUG SEP OCT NOV DEC JAN FEB MAR APR MAY JUN JUL AUG SEP OCT Schedule Public invitation for the project Meeting Design of experiments Test of DOI Registration DOI registration Interim report Final report Study Mtg. Outreach Mtg. Mid-term Report Mtg.
  • 23. Issues in Data DOI • Flow of operations • Persistent access • Granularity of data in registration • Dynamics of data • Landing page • Quantity of data • Applications 23
  • 24. Issues in Data DOI • Flow of operations: Who, When, How − Who registers data?: Researcher/Project manager/Librarian − When is data registered? − How is metadata provided for data? • Persistent access − What persistency can we expect for data? − Can time-limited projects participate? Who will ensure the persistency of the data? (ex.) The representative institute takes over all of the data Registering DOIs only for data managed by real organizations among the members of the project 24
  • 25. ID metadata Data Register Create Register Modify saveCreate publish Modify remove Researcher PublisherPublisher Life cycle of data and stakeholders - in case of literature - 25
  • 26. ID metadata Data Register Create Register Modify saveCreate publish Modify remove Researcher LibraryInstitutional Repository Life cycle of data and stakeholders - in case of literature - 26
  • 27. ID metadata Data Register Create Register Modify saveCreate publish Modify remove Life cycle of data and stakeholders - in case of data - 27 Create Register Modify Researcher Library Research Institution Project JaLC Metadata Domain Metadata
  • 28. Issues in Data DOI • Persistent access − What persistency can we expect for data? − Can time-limited projects participate? Who will ensure the persistency of the data? (ex.) The representative institute takes over all of the data Registering DOIs only for data managed by real organizations among the members of the project 28
  • 29. Projects and Institutions • Research project may consist on members from multiple institutes Articles Research Data Members Associate Members Project Q ZZ Univ.XX Univ. YY Univ. Y Univ. Z Univ.X Society XX Society YY Society ZZ Society A Res. Inst.
  • 30. Issues in Data DOI (cont’d) • Granularity of data in registration – Some aspects for granularity of data • Good for citation • Granularity of data itself – Observation data/Experiment data/Simulation data • Easy for access • Easy for management • Quantity of data 30
  • 31. Issues in Data DOI (cont’d) • Dynamics of data − Adding data after registration of DOI − Some options: − Different DOIs − Add relationship metadata to denote the relation to the original DOIs − Use the original DOI − Versioning: add the link to the new data while keep the link to the original data − History of changes in the single DOI − No descriptions (e.g., data in observing) 31
  • 32. Issues in Data DOI (cont’d) • Landing page − Metadata description − For open/closed data • Quantity of data − Registering DOI for a large amount of data • Applications − Citing DOIs for research data − Developing other applications 32
  • 33. Recommendations for Data DOIs • Recognition of variety of the nature of data • Minimal Commitment – Persistency, Interoperability, Usability, manageability • Design own “DOI Registration Policy” – Along with Institutional “Data Management Policy” – Define/recommend rules of DOI registrations on these issues. • Flow of operations • Persistent access • Granularity of data in registration • Dynamics of data • Landing page • Quantity of data • …
  • 34. Summary • Data-sharing architecture – Interoperability should be guaranteed – Layers • ID/Metadata Schema/Metadata/Data format/Data/Repository – Cooperation and Competition • DOI is the promising ID for data but different in use from one for literature – DOI Registration Policy is needed