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Development of fluorescent ATP
biosensors for quantitative imaging of
extracellular ATP

Sui Nishiyama, Ryuta Iwakiri, Akira Kakizuka, Hiromi Imamura!
(Graduate School of Biostudies, Kyoto University, Japan)!
Importance of extracellular ATP signaling
Dynamic behavior of extracellular ATP is not understood well.
cytoplasm
P2X receptor P2Y receptor
signal transduction
extracellular!
space
ATP
・exocytosis!
・channel!
etc…
ATP ADP AMP Adenosine
development, immunity, neurotransmission, etc…
“QUEEN” for ATP measurement
Known problems with “QUEEN” to measure extracellular ATP
・Slow binding rate to ATP!
・Low photostability
ATP level in single bacterial cellsExcitation spectra
Improvement of binding rate
Flexible loop far away "
from ATP binding site
Structure of ε subunit
By limit flexibility with disulfide bond,!
we tried to increase binding rate.
NTDCTD
Improvement of binding rate
QUEEN-7μ QUEEN-7μ S-S
(stopped-flow spectrometer)
Improvement of photostability!
Low photostability is caused by changing hydrogen
bond network around GFP chromophore.
His148
chromophore
QUEEN-7μ QUEEN-7μ(H148K)
Improvement of photo stability under fluorescent
spectrometer!
Photostability of QUEENs under microscope
QUEEN-7μ QUEEN-7μ-H148K Time (sec)
QUEEN-7μ
QUEEN-7μ-H148K
(excitation: 405nm)
Fuluorescentintensity(%)
Imaging of extracellular ATP
ーATP +ATP
Improvement of fluorescence dynamic range
Changing amino acid sequence!
of two linker regions, dynamic range improved.
cpEGFP
εN εc
QUEEN-7μ(H148K) S-S & new mutationsQUEEN-7u(H148K) S-S
Wavelength (nm)
Fluorescentintensity
Dynamic range = 93%!
Kd = 2.7μM
Fluorescentintensity
Wavelength (nm)
Dynamic range = 316%!
Kd = 5.6μM
mutations

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研究内容(pdf)

  • 1. 
 Development of fluorescent ATP biosensors for quantitative imaging of extracellular ATP
 Sui Nishiyama, Ryuta Iwakiri, Akira Kakizuka, Hiromi Imamura! (Graduate School of Biostudies, Kyoto University, Japan)!
  • 2. Importance of extracellular ATP signaling Dynamic behavior of extracellular ATP is not understood well. cytoplasm P2X receptor P2Y receptor signal transduction extracellular! space ATP ・exocytosis! ・channel! etc… ATP ADP AMP Adenosine development, immunity, neurotransmission, etc…
  • 3. “QUEEN” for ATP measurement
  • 4. Known problems with “QUEEN” to measure extracellular ATP ・Slow binding rate to ATP! ・Low photostability ATP level in single bacterial cellsExcitation spectra
  • 5. Improvement of binding rate Flexible loop far away " from ATP binding site Structure of ε subunit By limit flexibility with disulfide bond,! we tried to increase binding rate. NTDCTD
  • 6. Improvement of binding rate QUEEN-7μ QUEEN-7μ S-S (stopped-flow spectrometer)
  • 7. Improvement of photostability! Low photostability is caused by changing hydrogen bond network around GFP chromophore. His148 chromophore
  • 8. QUEEN-7μ QUEEN-7μ(H148K) Improvement of photo stability under fluorescent spectrometer!
  • 9. Photostability of QUEENs under microscope QUEEN-7μ QUEEN-7μ-H148K Time (sec) QUEEN-7μ QUEEN-7μ-H148K (excitation: 405nm) Fuluorescentintensity(%)
  • 10. Imaging of extracellular ATP ーATP +ATP
  • 11. Improvement of fluorescence dynamic range Changing amino acid sequence! of two linker regions, dynamic range improved. cpEGFP εN εc QUEEN-7μ(H148K) S-S & new mutationsQUEEN-7u(H148K) S-S Wavelength (nm) Fluorescentintensity Dynamic range = 93%! Kd = 2.7μM Fluorescentintensity Wavelength (nm) Dynamic range = 316%! Kd = 5.6μM mutations