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“ROLE OF miR-155 IN THE
REGULATION OF LYMPHOCYTE
IMMUNE FUNCTION”
INDIAN VETERINARY RESEARCH INSTITUTE
IZATNAGAR-243122
MASTER
MAESTRO
Introduction
Biogenesis and mechanism of action
Evolutionary conservation
Targets and Tissue distribution
Regulation
Therapeutic aspects
Future prospects
Conclusion
NON-CODING RNA: FORMERLY
KNOWN AS “JUNK”
http://catalyst.harvard.edu
miRNA
CHARACTERISTICS OF miRNA
 Small non-coding double stranded RNA.
 Approximately 19-22 nucleotide long.
 Repress activity of complementary mRNAs.
 Regulate 30% of mammalian gene products.
 miRNAs show phenomena of multiplicity and
cooperativity.
 Have been described in invertebrates and vertebrates:
worms, fungi, plants, and mammals.
 Many are conserved between vertebrates and invertebrates.
Xiao and Rajewsky, 2009 and http://catalyst.harvard.edu
miRNA GENES
 ~60% of miRNAs are expressed independently.
 ~15% of miRNAs are expressed in clusters.
 ~25% of miRNAs are in introns.
WHAT IS miR-155 ?
 MiR-155 is a microRNA that in humans is encoded by the
MIR155 host gene or MIR155HG.
 Formerly called as BIC (B-cell Integration Cluster).
 It was later found that the MIR155HG was composed of
three exons within human chromosome 21 (Hsa21 band
q21.3).
 The MIR155HG RNA transcript does not contain a long
open reading frame (ORF).
Mol. Cell. Biol. 17 (3): 1490–502
BIOGENESIS
Advances.nutrition.org
Micro RNA silencing via many mechanism-
1)Inhibition of intiation
2)Post inhibiton initiation
3)m-RNA degradation- (a) Decapping
(b) Deadenylation
Mechanism of action of miRNA
Evolutionary Conservation
 Sequence of pre-mir-155 and miR-155-5p was conserved
between human, mouse, and chicken.
 miR-155-5p express more conserved sequences in 22
different organisms including mammals, amphibians, birds,
reptiles, sea squirts, and sea lampreys.
 Less sequence data is available regarding miR-155-3p.
Teng G, Papavasiliou Faraoni I, Antonetti FR, Cardone J, Bonmassar E (2009)
WHERE IS MY TARGET
HERE IS SOMETHING MORE
?
TARGAETS
CONTD....
PREDICTION OF COMMON
CONSERVED SEED REGION
SITES THAT ARE CONSERVED , MORE RESPOND
SITES FALLING IN ORFs FEW RESPOND
SITES IN FAVORABLE PREDICTED CONTEXT MORE
RESPOND (Grimson et al., 2007)
mRNAS WITH MORE SITES, MORE RESPONSE
(Grimson et al., 2007)
miRNAs WITH STRONGER SEED PAIRING ,MORE
EFFECTIVE (Garcia et al., 2011)
miRNAs WITH FEWER TARGET m-RNAs MORE
EFFECTIVE (Garcia et al., 2011)
CONTD....
TISSUE DISTRIBUTION
 miR-155 pri-miRNA was abundantly expressed in the spleen
and thymus.
 miR-155 detectable in the liver, lung, and kidney.
 miR-155 expression is specific for hematopoietic cells including
B-cells,T-cells, monocytes and granulocytes.
 Expression levels of miR-155-3p were 20-200 fold less when
compared to miR-155-5p levels.
REGULATION
Recent miRNA deletion studies have revealed a
central role in the regulation of the immune response.
The deletion of miRNA-155 impaired T and B cell
differentiation in germinal centers.
 Greatly decreased antibody and cytokine production.
REGULATION OF LYMPHOCYTE
An Overview of Regulation by miR-155
REGULATION OF T-LYMPHOCYTE
CONCEPT TO REGULATE IMMUNE
FUNCTIONS
UP
REGULATION
DOWN
REGULATION
POSITIVE NEGATIVE
Goal
HOMEOSTASIS
STABLIZATION
HOW miR-155 REGULATE T- LYMPHOCYTE
IMMUNE FUNCTION
 Regulation of differentiation into the memory or effector
phenotypes of T cells .
 Control of T-cell differentiation: to favour Th1 responses partially
by modulating cytokine production .
 Control of proliferation and homeostasis of Treg cells by stabilizing
the signal of FOXP3 through the targeting of SOCS1.
MOLECULAR BASIS REGULATION
PLoS ONE (2012) Yao R, Ma YL, Liang W, Li HH, Ma ZJ, Yu X, Liao YH
CONTD…
IL-2
FOXP3
miR-155
c-Maf
IL-4
production
Th2
Phenotype
IFN-Y and IL
—2 release
ROLE OF Mir-155 IN REGULATION OF B-
LYMPHOCYTE
miR-155
Molecules ISSN 1420-3049 www.mdpi.com/journal/molecules 2014
HOW miR-155 REGULATE B- LYMPHOCYTE
IMMUNE FUNCTION
 Control of B-cell differentiation and GC reaction: activation
and function of B cell in germinal centres and for T-cell
dependent antibody responses by negatively modulating
somatic hypermutation and class-switch recombination
through the targeting of AID and PU.1 .
 Required for normal production of isotype-switched, high
affinity IgG1 antibodies in B-cells
Molecules ISSN 1420-3049 www.mdpi.com/journal/molecules 2014
MOLECULAR BASIS REGULATION
Mark A. Lindsay, Trends in Immunology Vol.29 No.7347 cell
ROLE OF Mir-155 IN LYMPHOCYTE IMMUNE
FUNCTION
An overview
OVERVIEW OF REGULATION BY
DIFFERENT PATHWAY AND OUTCOME
Immunology Review: Nabila Seddiki,Vedran Brezar,Nicolas Ruffin,Yves Levy
and Sanjay Swaminathan
THERAPEUTIC ASPECTS
THERAPEUTIC APPROACH
CANCER
Lung cancer, Breast cancer, B-cell lymphomas
CONTD…
HYPERTENSION AND CARDIOVASCULAR
DISEASES
Mir-155
REGULATION OF
AGTR1 GENE
DOWNREGULATION
OF AGTR1 PROTEIN
HYPERTENSION
DOWN-MODULATES
INFLAMMATORY
CYTOKINE
PRODUCTION
DECREASES AS
PROGRESSION
FUTURE PROSPECTS
 MiR-155 serves as important targets in cancer therapy.
 Nanoparticle-based therapy in an in- vivo microRNA-155.
 Suggesting a promising therapeutic option for lymphoma/leukemia.
 We show that systemic delivery of antisense peptide nucleic acids
encapsulated in unique polymer nanoparticles inhibits miR-155 and
slows the growth of these “addicted” pre-B-cell tumors in vivo.
 miRNAs in disease diagnosis and therapy as biomarkers miR-155.
CONCLUSION
 miR-155 IS A HIGHLY EXPRESSED AND IMPORTANT miRNA WITH
FUNCTIONAL RELEVANCE IN THE BIOLOGY OF LYMPHOCYTES
 DYSREGULATION OF miR-155 HAS BEEN SHOWN TO HAVE RELEVANCE
IN A NUMBER OF HUMAN TUMOURS, AUTOIMMUNE DISEASES AND
RESPONSES TO VIRAL INFECTIONS BY T CELLS AND B CELLS
 miR-155 IN LYMPHOCYTES IN VARIOUS DISEASE STATES, MAY LEAD TO
THE IDENTIFICATION OF NEW PROTEIN TARGETS THAT LEAD TO
NOVEL THERAPIES FOR THESE CONDITIONS
 miR-155, IN CONCERT WITH OTHER MIRNAS, REGULATE GENE
FUNCTION IN LYMPHOCYTES AND ALSO THEIR PRECISE ROLE IN
DISEASE PATHOGENESIS
POINEER WORKER
Victor Ambros Gary Bruce Ruvkun
David Baulcombe
Craig C. MelloAndrew Z. Fire
REFERENCES
 Requirement of bic/microRNA-155 for normal immune function Rodriguez
A, Vigorito E, Clare S et al. Science 2007.
 New regulators of immune cell development and function- Nat Immunol
Baltimore D, Boldin MP, O’Connell RM, Rao DS, Taganov KD.
MicroRNAs: 2008.
 SOCS,inflammation,andautoimmunity -AkihikoYoshimura, MayuSuzuki ,
RyotaSakaguchi ,ToshikatsuHanada and HideoYasukawa.
 Challenges and Opportunities of MicroRNAs in Lymphomas -Giacoma De
Tullio , Vincenza De Fazio , Nicola Sgherza , Carla Minoia , Simona
Serratì ,Francesca Merchionne , Giacomo Loseto , Angela Iacobazzi ,
Antonello Rana ,Patrizia Petrillo , Nicola Silvestris , Pasquale Iacopino ,and
Attilio Guarini :MOLECULE 2014
 A role for miR-155 in enabling tumor-infiltrating innate immune cells to
mount effective antitumor responses in mice -Zonari E, Pucci F, Saini M,
Mazzieri R, Politi LS, Gentner B, Naldini L.. Blood 2013.
 Role of miR-155 in the regulation of lymphocyte immune function and
disease-Nabila Seddiki, Vedran Brezar,Nicolas Ruffin, Yves Levy, and
Sanjay Swaminathan
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Role of Mirn 155 in thr regulation of lymhocyte

  • 1. “ROLE OF miR-155 IN THE REGULATION OF LYMPHOCYTE IMMUNE FUNCTION” INDIAN VETERINARY RESEARCH INSTITUTE IZATNAGAR-243122
  • 3. Introduction Biogenesis and mechanism of action Evolutionary conservation Targets and Tissue distribution Regulation Therapeutic aspects Future prospects Conclusion
  • 4. NON-CODING RNA: FORMERLY KNOWN AS “JUNK” http://catalyst.harvard.edu miRNA
  • 5. CHARACTERISTICS OF miRNA  Small non-coding double stranded RNA.  Approximately 19-22 nucleotide long.  Repress activity of complementary mRNAs.  Regulate 30% of mammalian gene products.  miRNAs show phenomena of multiplicity and cooperativity.  Have been described in invertebrates and vertebrates: worms, fungi, plants, and mammals.  Many are conserved between vertebrates and invertebrates. Xiao and Rajewsky, 2009 and http://catalyst.harvard.edu
  • 6. miRNA GENES  ~60% of miRNAs are expressed independently.  ~15% of miRNAs are expressed in clusters.  ~25% of miRNAs are in introns.
  • 7. WHAT IS miR-155 ?  MiR-155 is a microRNA that in humans is encoded by the MIR155 host gene or MIR155HG.  Formerly called as BIC (B-cell Integration Cluster).  It was later found that the MIR155HG was composed of three exons within human chromosome 21 (Hsa21 band q21.3).  The MIR155HG RNA transcript does not contain a long open reading frame (ORF). Mol. Cell. Biol. 17 (3): 1490–502
  • 9.
  • 10. Micro RNA silencing via many mechanism- 1)Inhibition of intiation 2)Post inhibiton initiation 3)m-RNA degradation- (a) Decapping (b) Deadenylation Mechanism of action of miRNA
  • 11. Evolutionary Conservation  Sequence of pre-mir-155 and miR-155-5p was conserved between human, mouse, and chicken.  miR-155-5p express more conserved sequences in 22 different organisms including mammals, amphibians, birds, reptiles, sea squirts, and sea lampreys.  Less sequence data is available regarding miR-155-3p. Teng G, Papavasiliou Faraoni I, Antonetti FR, Cardone J, Bonmassar E (2009)
  • 12. WHERE IS MY TARGET
  • 17. SITES THAT ARE CONSERVED , MORE RESPOND SITES FALLING IN ORFs FEW RESPOND SITES IN FAVORABLE PREDICTED CONTEXT MORE RESPOND (Grimson et al., 2007) mRNAS WITH MORE SITES, MORE RESPONSE (Grimson et al., 2007) miRNAs WITH STRONGER SEED PAIRING ,MORE EFFECTIVE (Garcia et al., 2011) miRNAs WITH FEWER TARGET m-RNAs MORE EFFECTIVE (Garcia et al., 2011) CONTD....
  • 18. TISSUE DISTRIBUTION  miR-155 pri-miRNA was abundantly expressed in the spleen and thymus.  miR-155 detectable in the liver, lung, and kidney.  miR-155 expression is specific for hematopoietic cells including B-cells,T-cells, monocytes and granulocytes.  Expression levels of miR-155-3p were 20-200 fold less when compared to miR-155-5p levels.
  • 19. REGULATION Recent miRNA deletion studies have revealed a central role in the regulation of the immune response. The deletion of miRNA-155 impaired T and B cell differentiation in germinal centers.  Greatly decreased antibody and cytokine production.
  • 20. REGULATION OF LYMPHOCYTE An Overview of Regulation by miR-155
  • 22. CONCEPT TO REGULATE IMMUNE FUNCTIONS UP REGULATION DOWN REGULATION POSITIVE NEGATIVE Goal HOMEOSTASIS STABLIZATION
  • 23. HOW miR-155 REGULATE T- LYMPHOCYTE IMMUNE FUNCTION  Regulation of differentiation into the memory or effector phenotypes of T cells .  Control of T-cell differentiation: to favour Th1 responses partially by modulating cytokine production .  Control of proliferation and homeostasis of Treg cells by stabilizing the signal of FOXP3 through the targeting of SOCS1.
  • 24. MOLECULAR BASIS REGULATION PLoS ONE (2012) Yao R, Ma YL, Liang W, Li HH, Ma ZJ, Yu X, Liao YH
  • 26. ROLE OF Mir-155 IN REGULATION OF B- LYMPHOCYTE miR-155 Molecules ISSN 1420-3049 www.mdpi.com/journal/molecules 2014
  • 27. HOW miR-155 REGULATE B- LYMPHOCYTE IMMUNE FUNCTION  Control of B-cell differentiation and GC reaction: activation and function of B cell in germinal centres and for T-cell dependent antibody responses by negatively modulating somatic hypermutation and class-switch recombination through the targeting of AID and PU.1 .  Required for normal production of isotype-switched, high affinity IgG1 antibodies in B-cells Molecules ISSN 1420-3049 www.mdpi.com/journal/molecules 2014
  • 28. MOLECULAR BASIS REGULATION Mark A. Lindsay, Trends in Immunology Vol.29 No.7347 cell
  • 29. ROLE OF Mir-155 IN LYMPHOCYTE IMMUNE FUNCTION An overview
  • 30. OVERVIEW OF REGULATION BY DIFFERENT PATHWAY AND OUTCOME Immunology Review: Nabila Seddiki,Vedran Brezar,Nicolas Ruffin,Yves Levy and Sanjay Swaminathan
  • 31.
  • 34. CANCER Lung cancer, Breast cancer, B-cell lymphomas
  • 36. HYPERTENSION AND CARDIOVASCULAR DISEASES Mir-155 REGULATION OF AGTR1 GENE DOWNREGULATION OF AGTR1 PROTEIN HYPERTENSION DOWN-MODULATES INFLAMMATORY CYTOKINE PRODUCTION DECREASES AS PROGRESSION
  • 37. FUTURE PROSPECTS  MiR-155 serves as important targets in cancer therapy.  Nanoparticle-based therapy in an in- vivo microRNA-155.  Suggesting a promising therapeutic option for lymphoma/leukemia.  We show that systemic delivery of antisense peptide nucleic acids encapsulated in unique polymer nanoparticles inhibits miR-155 and slows the growth of these “addicted” pre-B-cell tumors in vivo.  miRNAs in disease diagnosis and therapy as biomarkers miR-155.
  • 38. CONCLUSION  miR-155 IS A HIGHLY EXPRESSED AND IMPORTANT miRNA WITH FUNCTIONAL RELEVANCE IN THE BIOLOGY OF LYMPHOCYTES  DYSREGULATION OF miR-155 HAS BEEN SHOWN TO HAVE RELEVANCE IN A NUMBER OF HUMAN TUMOURS, AUTOIMMUNE DISEASES AND RESPONSES TO VIRAL INFECTIONS BY T CELLS AND B CELLS  miR-155 IN LYMPHOCYTES IN VARIOUS DISEASE STATES, MAY LEAD TO THE IDENTIFICATION OF NEW PROTEIN TARGETS THAT LEAD TO NOVEL THERAPIES FOR THESE CONDITIONS  miR-155, IN CONCERT WITH OTHER MIRNAS, REGULATE GENE FUNCTION IN LYMPHOCYTES AND ALSO THEIR PRECISE ROLE IN DISEASE PATHOGENESIS
  • 39. POINEER WORKER Victor Ambros Gary Bruce Ruvkun David Baulcombe Craig C. MelloAndrew Z. Fire
  • 40. REFERENCES  Requirement of bic/microRNA-155 for normal immune function Rodriguez A, Vigorito E, Clare S et al. Science 2007.  New regulators of immune cell development and function- Nat Immunol Baltimore D, Boldin MP, O’Connell RM, Rao DS, Taganov KD. MicroRNAs: 2008.  SOCS,inflammation,andautoimmunity -AkihikoYoshimura, MayuSuzuki , RyotaSakaguchi ,ToshikatsuHanada and HideoYasukawa.  Challenges and Opportunities of MicroRNAs in Lymphomas -Giacoma De Tullio , Vincenza De Fazio , Nicola Sgherza , Carla Minoia , Simona Serratì ,Francesca Merchionne , Giacomo Loseto , Angela Iacobazzi , Antonello Rana ,Patrizia Petrillo , Nicola Silvestris , Pasquale Iacopino ,and Attilio Guarini :MOLECULE 2014  A role for miR-155 in enabling tumor-infiltrating innate immune cells to mount effective antitumor responses in mice -Zonari E, Pucci F, Saini M, Mazzieri R, Politi LS, Gentner B, Naldini L.. Blood 2013.  Role of miR-155 in the regulation of lymphocyte immune function and disease-Nabila Seddiki, Vedran Brezar,Nicolas Ruffin, Yves Levy, and Sanjay Swaminathan