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Workshop on
Big Medical Data in Precision Medicine: Challenges or Opportunities?
Dr. Matthieu-P. Schapranow, Prof. Christof von Kalle
Festival of Genomics, London, UK
Jan 19, 2016
■  Prof. Dr. Christof von Kalle
■  Director of the German National Center for Tumor Diseases (NCT)
■  Full professor Division of Translational Oncology (NCT and DKFZ)
■  Fields of interest:
□  Haematology, Oncology
□  Short and long term hematopoiesis
□  Clinical research
□  Molecular and gene therapy for cancer and inherited diseases
Your Workshop Hosts
Schapranow/von Kalle,
Festival of Genomics,
Jan 19, 2016
2
■  Dr. Matthieu-P. Schapranow
■  Program Manager E-Health at the Hasso Plattner Institute (HPI)
■  Visiting Scientist at U.S. Department of Veterans Affairs (V.A.)
■  Fields of interest:
□  In-memory Computing
□  Real-time Data Exploration and Analysis
□  Business Process Optimization
□  Translation of Genomics and Life Sciences into Clinical Routine
Your Workshop Hosts
Schapranow/von Kalle,
Festival of Genomics,
Jan 19, 2016
3
■  Cindy Perscheid, M.Sc.
■  Ph.D. cand. at the Hasso Plattner Institute (HPI)
■  Fields of interest:
□  In-memory Computing
□  Genome Data Processing
□  Business Process Optimization
□  Text-mining
Subject Matter Expert
Schapranow/von Kalle,
Festival of Genomics,
Jan 19, 2016
4
■  1.00pm Opening and Welcome (Schapranow / von Kalle)
■  1.10pm Genomics in Oncology (von Kalle)
■  1.40pm Challenges of Big Medical Data (Schapranow)
■  1.55pm Analyze Genomes: Real-world Examples (Schapranow)
■  2.25pm Real-time Exploration of the Cancer Genome, the Human Immune System and other NCT
projects (von Kalle)
■  2.45pm Analyze Genomes: A Federated In-Memory Computing Platform for Life Sciences
(Schapranow)
■  3.00pm Modeling of Genome Data Processing Pipelines and Their Execution Using the Analyze
Genomes Worker Framework (Perscheid)
■  3.30pm Mining and Processing of Unstructured Medical Data (Perscheid)
■  3.45pm Q&A, Closing Remarks (Schapranow / von Kalle)
Agenda
Schapranow/von Kalle,
Festival of Genomics,
Jan 19, 2016
5

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Festival of Genomics 2016 London: Agenda

  • 1. Workshop on Big Medical Data in Precision Medicine: Challenges or Opportunities? Dr. Matthieu-P. Schapranow, Prof. Christof von Kalle Festival of Genomics, London, UK Jan 19, 2016
  • 2. ■  Prof. Dr. Christof von Kalle ■  Director of the German National Center for Tumor Diseases (NCT) ■  Full professor Division of Translational Oncology (NCT and DKFZ) ■  Fields of interest: □  Haematology, Oncology □  Short and long term hematopoiesis □  Clinical research □  Molecular and gene therapy for cancer and inherited diseases Your Workshop Hosts Schapranow/von Kalle, Festival of Genomics, Jan 19, 2016 2
  • 3. ■  Dr. Matthieu-P. Schapranow ■  Program Manager E-Health at the Hasso Plattner Institute (HPI) ■  Visiting Scientist at U.S. Department of Veterans Affairs (V.A.) ■  Fields of interest: □  In-memory Computing □  Real-time Data Exploration and Analysis □  Business Process Optimization □  Translation of Genomics and Life Sciences into Clinical Routine Your Workshop Hosts Schapranow/von Kalle, Festival of Genomics, Jan 19, 2016 3
  • 4. ■  Cindy Perscheid, M.Sc. ■  Ph.D. cand. at the Hasso Plattner Institute (HPI) ■  Fields of interest: □  In-memory Computing □  Genome Data Processing □  Business Process Optimization □  Text-mining Subject Matter Expert Schapranow/von Kalle, Festival of Genomics, Jan 19, 2016 4
  • 5. ■  1.00pm Opening and Welcome (Schapranow / von Kalle) ■  1.10pm Genomics in Oncology (von Kalle) ■  1.40pm Challenges of Big Medical Data (Schapranow) ■  1.55pm Analyze Genomes: Real-world Examples (Schapranow) ■  2.25pm Real-time Exploration of the Cancer Genome, the Human Immune System and other NCT projects (von Kalle) ■  2.45pm Analyze Genomes: A Federated In-Memory Computing Platform for Life Sciences (Schapranow) ■  3.00pm Modeling of Genome Data Processing Pipelines and Their Execution Using the Analyze Genomes Worker Framework (Perscheid) ■  3.30pm Mining and Processing of Unstructured Medical Data (Perscheid) ■  3.45pm Q&A, Closing Remarks (Schapranow / von Kalle) Agenda Schapranow/von Kalle, Festival of Genomics, Jan 19, 2016 5