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Clinical Case discussions- set-1
Professor (Dr.)Namrata Chhabra
Ph.D. Medical Biochemistry (Scholar),
MPhil Health Professions Education,
CMCL FAIMER Fellow- Regional Institution,
MD(Biochemistry), M.B.B.S.
10-Jan-22 Biochemistry Spotting 1
Spot-1
10-Jan-22 Biochemistry Spotting 2
Write the normal reference range
A 56-year-old diabetic, reported to the physician’s office for a
routine visit to monitor his treatment.
His physician drew blood for an HbA1C determination. The
laboratory reported a value of 8.5%.
• What is the normal reference range of HbA1c and
• What is the significance of its measurement?
10-Jan-22 Biochemistry Spotting 3
Answer
• Normal level of HbA1c- 4.0–6.0%
• Significance-HbA1c is an important indicator of long-term glycemic
control with the ability to reflect the overall glycemic history of the
preceding three-four months (120 days).
• HbA1c not only provides a reliable measure of chronic hyperglycemia
but also correlates well with the risk of long-term diabetes
complications.
10-Jan-22 Biochemistry Spotting 4
Spot-2
10-Jan-22 Biochemistry Spotting 5
Case study
• A 28-year-old man was admitted to the hospital with a week-long
history of severe vomiting.
• He confessed to self medication for his chronic heart burns and
indigestion.
• He was clinically severely dehydrated and had shallow respiration.
• Initial biochemical results were:
• pCO2- 44 mmHg, Serum Bicarbonate- 41 mEq/L, pH-7.5.
• Comment on the acid- base status
10-Jan-22 Biochemistry Spotting 6
Answer
• High pH, high serum bicarbonate and near normal pCO2.
• This is a case of compensated metabolic alkalosis.
10-Jan-22 Biochemistry Spotting 7
Spot-3
10-Jan-22 Biochemistry Spotting 8
Urine analysis report
A. Physical Examination
• Color: Straw colored
• Appearance: Clear
• Odor: Aromatic
• pH: 6.0
• Specific Gravity: 1.030
• Volume: 150 ml
B. Chemical Examination
•Sugar: ++++
• Proteins: nil
• Bilirubin: nil
• Bile Salts: nil
• Ketone bodies: nil
What might be the most probable diagnosis ?
10-Jan-22 Biochemistry Spotting 9
Answer
• High specific gravity, and
• Glucose in urine, indicate that,
• It is a case of glycosuria (precisely glucosuria).
10-Jan-22 Biochemistry Spotting 10
Spot-4
10-Jan-22 Biochemistry Spotting 11
Mechanism of action of the displayed drug
• An unskilled worker in a water garden was sent to
sweep up a spill of a white powder in the storage shed.
• Later he was found with labored breathing and
convulsions.
• On further examination, the white powder was
identified as rotenone.
• Respiratory distress was induced on rotenone
exposure.
• What is the mechanism of action of Rotenone?
10-Jan-22 Biochemistry Spotting 12
Answer
• Rotenone is an inhibitor of electron transport chain.
• It blocks electron transfer in NADH-Q oxidoreductase (complex I) and
thereby prevents the utilization of NADH as a substrate in the
electron transport chain.
10-Jan-22 Biochemistry Spotting 13
Spot-5
10-Jan-22 Biochemistry Spotting 14
Enzyme Inhibition
• Name an anticancer drug
that works by the
mechanism shown in the
picture.
• What might be the effect of
that drug on the affinity of
the enzyme for its true
substrate?
10-Jan-22 Biochemistry Spotting 15
Answer
• The graph shows the mechanism of action of a competitive enzyme
inhibitor. Vmax is constant; however, Km is increased.
• Km denotes the affinity of an enzyme for its substrate. Km is reversely
associated with enzyme’s affinity for its substrate; higher the Km
value lesser the affinity of the enzyme for its substrate and vice versa
• Therefore, in the presence of a competitive enzyme inhibitor, the
affinity of the enzyme for its substrate is decreased.
• Methotrexate is an example of an anticancer drug that works by
competitively inhibiting Dihydrofolate reductase enzyme.
10-Jan-22 Biochemistry Spotting 16
Spot-6
10-Jan-22 Biochemistry Spotting 17
Clinical diagnosis
• A 21-year-old young woman, who recently began taking birth control
pills, presents to the emergency room with cramping abdominal pain,
anxiety, paranoia, and hallucinations.
• A surgical evaluation, including ultrasound and computed
tomography (CT) scan, fails to demonstrate an acute abdominal
process.
• A urine analysis reveals an increase in urine porphyrins.
• Which enzyme defect might be responsible for clinical
manifestations in this disease?
• What is the most probable diagnosis ?
10-Jan-22 Biochemistry Spotting 18
Answer
• The patient is suffering from Acute intermittent porphyria.
• The typical combination of abdominal pain, psychiatric symptoms and
increased amounts of urinary porphyrins & their precursors are
indicative of Acute intermittent porphyria.
• Enzyme defect- Deficiency of Porphobilinogen deaminase.
• Symptoms are triggered by oral contraceptive pills.
10-Jan-22 Biochemistry Spotting 19
Spot-7
10-Jan-22 Biochemistry Spotting 20
Defective TCA cycle enzyme
• A post-operative patient on intravenous fluids develops lesions in the
mouth (angular stomatitis).
• Urinalysis indicates an excretion of 15 μg riboflavin/mg creatinine,
which is abnormally low.
• Which of the following TCA cycle enzymes is most likely to be
affected?
A. Citrate synthase
B. Isocitrate dehydrogenase
C. Fumarase
D. Malate dehydrogenase
E. Succinate dehydrogenase
10-Jan-22 Biochemistry Spotting 21
Answer
• It is clearly a case of Riboflavin deficiency.
• Out of all, Succinate dehydrogenase is the only TCA cycle enzyme that
is FAD dependent.
• Therefore, the activity of Succinate dehydrogenase will be most
affected in Riboflavin deficiency.
10-Jan-22 Biochemistry Spotting 22
Spot-8
10-Jan-22 Biochemistry Spotting 23
Interpret from the findings
• An 18-year-old girl
child has been
brought to Pediatric
O.P.D in a semi-
conscious state. The
blood and urinary
findings have been
displayed. Write the
most probable
diagnosis and the
reason for your
conclusion.
A B
Results of GOD-POD
method
B S T
Urinalysis
10-Jan-22 Biochemistry Spotting 24
Answer
• The color intensity of test sample (T) is higher than that of
Standard(S).
• Given the concentration of standard as 100 mg%, the test sample has
glucose concentration higher than of standard (hyperglycemia).
• Urine also shows the presence of glucose (glucosuria), and ketone
bodies (ketonuria), as evident from positive Benedict’s and Rothera’s
test respectively.
• Therefore, it is clearly a case of Diabetic ketoacidosis, biochemically as
well as clinically.
10-Jan-22 Biochemistry Spotting 25
Spot-9
10-Jan-22 Biochemistry Spotting 26
Interpret from the findings
• Calculate the creatinine clearance
of a patient with following
findings:
• Serum creatinine-3 mg/dL,
• Urinary volume -1500 ml/ day
• Urinary creatinine -0.75 G/L.
• Urinary protein ++++
• State the diagnosis.
10-Jan-22 Biochemistry Spotting 27
B s T
Answer
• Creatinine clearance(C)= UV/P
• Where U= Urinary creatinine (mg/dl)
• V= Volume of urine excreted (ml/day)
• P= Serum Creatinine (mg/dl)
• Thus, applying the values-
• V= 1500 ml/day, convert to ml/ minutes
• i.e., = 1500/24x60= 1.1 ml/minute (Approximately)
• U= 0.75 G/L, Convert it to mg/dl
• i.e. 75 mg/dl
• Creatinine clearance (C) = 75x1.1/3 = 27.5 ml/minute
• It is much below the physiological range;
• Proteinuria is also there, hence it might be a case of renal failure (impaired renal functions)
10-Jan-22 Biochemistry Spotting 28
Spot-10
10-Jan-22 Biochemistry Spotting 29
Identify and state the significance of each of the
techniques A and B
A B
10-Jan-22 Biochemistry Spotting 30
Answer
• Technique A- Paper electrophoresis, frequently used for isolating
proteins, amino acids and oligopeptides
• Technique B- Thin layer chromatography frequently used to separate
mixtures.
10-Jan-22 Biochemistry Spotting 31
Spot-11
10-Jan-22 Biochemistry Spotting 32
State the diagnosis
• A 64-year-old man presented to the emergency department with a 3-
day history of chest pain and shortness of breath.
• He complained that his face and extremities had a blue color.
• History revealed that he was a known patient of chronic unstable
angina for which he was taking nitroglycerine and Isosorbide
dinitrate.
• Blood obtained for analysis was chocolate –colored.
• What is the most likely diagnosis?
10-Jan-22 Biochemistry Spotting 33
Answer
• The symptoms are suggestive of Methemoglobinemia.
• Isosorbide dinitrate (ISDN) has been used in the treatment of
Ischaemic cardiovascular diseases for many years.
• ISDN is the most popular nitric oxide donor and causes
methemoglobinemia as an important side-effect.
• Symptoms are suggestive of Methemoglobinemia caused by ISDN.
10-Jan-22 Biochemistry Spotting 34
Spot-12
10-Jan-22 Biochemistry Spotting 35
What is the most probable diagnosis ?
• The main symptom is bleeding (hemorrhage)—into the skin (causing
bruises), from the nose, from a wound, in the stomach, or in the
intestine.
• Blood may be seen in the urine or stool.
• In newborns, life-threatening bleeding within or around the brain may
occur.
10-Jan-22 Biochemistry Spotting 36
Answer
• This is a case of vitamin K deficiency
• A deficiency of vitamin K can lead to extreme bleeding, which can
begin as a gum, nose discharge, bruising, bleeding in the cavities or
internal hemorrhages.
10-Jan-22 Biochemistry Spotting 37
Spot-13
10-Jan-22 Biochemistry Spotting 38
Spot question
• “Babies undergoing
phototherapy for
physiological jaundice are
prone to develop
riboflavin deficiency”
• What might be the
reason ?
10-Jan-22 Biochemistry Spotting 39
Answer
• Riboflavin is extremely light sensitive; therefore, upon exposure to
blue light during phototherapy, it undergoes degradation.
• Milk should be stored in containers that protect against
photodegradation.
10-Jan-22 Biochemistry Spotting 40
Spot-14
10-Jan-22 Biochemistry Spotting 41
Spot diagnosis
• A teenage girl presents with moderate to severe
epigastric pain.
• Physical examination reveals extensive eruptive
xanthomas and hepatosplenomegaly.
• A blood sample reveals milky plasma.
• What might be the possible diagnosis ?
10-Jan-22 Biochemistry Spotting 42
Answer
• The clinical picture is suggestive of Familial lipoprotein lipase
deficiency(hyperchylomicronemia).
• A variant of this diseases can be produced by deficiency of apo CII.
• It is present in early childhood, and is manifested by eruptive
xanthomas, recurrent abdominal pain with no premature
cardiovascular disease.
10-Jan-22 Biochemistry Spotting 43
Spot-15
10-Jan-22 Biochemistry Spotting 44
Make a diagnosis from the displayed clinical and laboratory
findings. What is the underlying defect ?
10-Jan-22 Biochemistry Spotting 45
Answer
• This is clearly a case of congenital erythropoietic porphyria that
occurs due to the deficiency of uroporphyrinogen III synthase
enzyme.
• Severe cutaneous hypersensitivity, Erythtrodontia (teeth are reddish-
brown and fluoresce on exposure to long-wave ultraviolet light) and
purple colored urine are suggestive of congenital erythropoietic
porphyria .
10-Jan-22 Biochemistry Spotting 46
Spot-16
10-Jan-22 Biochemistry Spotting 47
State the diagnosis and mention the underlying
defect
S-4-
Answer
• The picture is indicative of xerophthalmia that occurs due to vitamin A
deficiency.
• Xerophthalmia results from keratinization of the conjunctiva.
10-Jan-22 Biochemistry Spotting 49
Thank you
10-Jan-22 Biochemistry Spotting 50

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Clinical case discussions

  • 1. Clinical Case discussions- set-1 Professor (Dr.)Namrata Chhabra Ph.D. Medical Biochemistry (Scholar), MPhil Health Professions Education, CMCL FAIMER Fellow- Regional Institution, MD(Biochemistry), M.B.B.S. 10-Jan-22 Biochemistry Spotting 1
  • 3. Write the normal reference range A 56-year-old diabetic, reported to the physician’s office for a routine visit to monitor his treatment. His physician drew blood for an HbA1C determination. The laboratory reported a value of 8.5%. • What is the normal reference range of HbA1c and • What is the significance of its measurement? 10-Jan-22 Biochemistry Spotting 3
  • 4. Answer • Normal level of HbA1c- 4.0–6.0% • Significance-HbA1c is an important indicator of long-term glycemic control with the ability to reflect the overall glycemic history of the preceding three-four months (120 days). • HbA1c not only provides a reliable measure of chronic hyperglycemia but also correlates well with the risk of long-term diabetes complications. 10-Jan-22 Biochemistry Spotting 4
  • 6. Case study • A 28-year-old man was admitted to the hospital with a week-long history of severe vomiting. • He confessed to self medication for his chronic heart burns and indigestion. • He was clinically severely dehydrated and had shallow respiration. • Initial biochemical results were: • pCO2- 44 mmHg, Serum Bicarbonate- 41 mEq/L, pH-7.5. • Comment on the acid- base status 10-Jan-22 Biochemistry Spotting 6
  • 7. Answer • High pH, high serum bicarbonate and near normal pCO2. • This is a case of compensated metabolic alkalosis. 10-Jan-22 Biochemistry Spotting 7
  • 9. Urine analysis report A. Physical Examination • Color: Straw colored • Appearance: Clear • Odor: Aromatic • pH: 6.0 • Specific Gravity: 1.030 • Volume: 150 ml B. Chemical Examination •Sugar: ++++ • Proteins: nil • Bilirubin: nil • Bile Salts: nil • Ketone bodies: nil What might be the most probable diagnosis ? 10-Jan-22 Biochemistry Spotting 9
  • 10. Answer • High specific gravity, and • Glucose in urine, indicate that, • It is a case of glycosuria (precisely glucosuria). 10-Jan-22 Biochemistry Spotting 10
  • 12. Mechanism of action of the displayed drug • An unskilled worker in a water garden was sent to sweep up a spill of a white powder in the storage shed. • Later he was found with labored breathing and convulsions. • On further examination, the white powder was identified as rotenone. • Respiratory distress was induced on rotenone exposure. • What is the mechanism of action of Rotenone? 10-Jan-22 Biochemistry Spotting 12
  • 13. Answer • Rotenone is an inhibitor of electron transport chain. • It blocks electron transfer in NADH-Q oxidoreductase (complex I) and thereby prevents the utilization of NADH as a substrate in the electron transport chain. 10-Jan-22 Biochemistry Spotting 13
  • 15. Enzyme Inhibition • Name an anticancer drug that works by the mechanism shown in the picture. • What might be the effect of that drug on the affinity of the enzyme for its true substrate? 10-Jan-22 Biochemistry Spotting 15
  • 16. Answer • The graph shows the mechanism of action of a competitive enzyme inhibitor. Vmax is constant; however, Km is increased. • Km denotes the affinity of an enzyme for its substrate. Km is reversely associated with enzyme’s affinity for its substrate; higher the Km value lesser the affinity of the enzyme for its substrate and vice versa • Therefore, in the presence of a competitive enzyme inhibitor, the affinity of the enzyme for its substrate is decreased. • Methotrexate is an example of an anticancer drug that works by competitively inhibiting Dihydrofolate reductase enzyme. 10-Jan-22 Biochemistry Spotting 16
  • 18. Clinical diagnosis • A 21-year-old young woman, who recently began taking birth control pills, presents to the emergency room with cramping abdominal pain, anxiety, paranoia, and hallucinations. • A surgical evaluation, including ultrasound and computed tomography (CT) scan, fails to demonstrate an acute abdominal process. • A urine analysis reveals an increase in urine porphyrins. • Which enzyme defect might be responsible for clinical manifestations in this disease? • What is the most probable diagnosis ? 10-Jan-22 Biochemistry Spotting 18
  • 19. Answer • The patient is suffering from Acute intermittent porphyria. • The typical combination of abdominal pain, psychiatric symptoms and increased amounts of urinary porphyrins & their precursors are indicative of Acute intermittent porphyria. • Enzyme defect- Deficiency of Porphobilinogen deaminase. • Symptoms are triggered by oral contraceptive pills. 10-Jan-22 Biochemistry Spotting 19
  • 21. Defective TCA cycle enzyme • A post-operative patient on intravenous fluids develops lesions in the mouth (angular stomatitis). • Urinalysis indicates an excretion of 15 μg riboflavin/mg creatinine, which is abnormally low. • Which of the following TCA cycle enzymes is most likely to be affected? A. Citrate synthase B. Isocitrate dehydrogenase C. Fumarase D. Malate dehydrogenase E. Succinate dehydrogenase 10-Jan-22 Biochemistry Spotting 21
  • 22. Answer • It is clearly a case of Riboflavin deficiency. • Out of all, Succinate dehydrogenase is the only TCA cycle enzyme that is FAD dependent. • Therefore, the activity of Succinate dehydrogenase will be most affected in Riboflavin deficiency. 10-Jan-22 Biochemistry Spotting 22
  • 24. Interpret from the findings • An 18-year-old girl child has been brought to Pediatric O.P.D in a semi- conscious state. The blood and urinary findings have been displayed. Write the most probable diagnosis and the reason for your conclusion. A B Results of GOD-POD method B S T Urinalysis 10-Jan-22 Biochemistry Spotting 24
  • 25. Answer • The color intensity of test sample (T) is higher than that of Standard(S). • Given the concentration of standard as 100 mg%, the test sample has glucose concentration higher than of standard (hyperglycemia). • Urine also shows the presence of glucose (glucosuria), and ketone bodies (ketonuria), as evident from positive Benedict’s and Rothera’s test respectively. • Therefore, it is clearly a case of Diabetic ketoacidosis, biochemically as well as clinically. 10-Jan-22 Biochemistry Spotting 25
  • 27. Interpret from the findings • Calculate the creatinine clearance of a patient with following findings: • Serum creatinine-3 mg/dL, • Urinary volume -1500 ml/ day • Urinary creatinine -0.75 G/L. • Urinary protein ++++ • State the diagnosis. 10-Jan-22 Biochemistry Spotting 27 B s T
  • 28. Answer • Creatinine clearance(C)= UV/P • Where U= Urinary creatinine (mg/dl) • V= Volume of urine excreted (ml/day) • P= Serum Creatinine (mg/dl) • Thus, applying the values- • V= 1500 ml/day, convert to ml/ minutes • i.e., = 1500/24x60= 1.1 ml/minute (Approximately) • U= 0.75 G/L, Convert it to mg/dl • i.e. 75 mg/dl • Creatinine clearance (C) = 75x1.1/3 = 27.5 ml/minute • It is much below the physiological range; • Proteinuria is also there, hence it might be a case of renal failure (impaired renal functions) 10-Jan-22 Biochemistry Spotting 28
  • 30. Identify and state the significance of each of the techniques A and B A B 10-Jan-22 Biochemistry Spotting 30
  • 31. Answer • Technique A- Paper electrophoresis, frequently used for isolating proteins, amino acids and oligopeptides • Technique B- Thin layer chromatography frequently used to separate mixtures. 10-Jan-22 Biochemistry Spotting 31
  • 33. State the diagnosis • A 64-year-old man presented to the emergency department with a 3- day history of chest pain and shortness of breath. • He complained that his face and extremities had a blue color. • History revealed that he was a known patient of chronic unstable angina for which he was taking nitroglycerine and Isosorbide dinitrate. • Blood obtained for analysis was chocolate –colored. • What is the most likely diagnosis? 10-Jan-22 Biochemistry Spotting 33
  • 34. Answer • The symptoms are suggestive of Methemoglobinemia. • Isosorbide dinitrate (ISDN) has been used in the treatment of Ischaemic cardiovascular diseases for many years. • ISDN is the most popular nitric oxide donor and causes methemoglobinemia as an important side-effect. • Symptoms are suggestive of Methemoglobinemia caused by ISDN. 10-Jan-22 Biochemistry Spotting 34
  • 36. What is the most probable diagnosis ? • The main symptom is bleeding (hemorrhage)—into the skin (causing bruises), from the nose, from a wound, in the stomach, or in the intestine. • Blood may be seen in the urine or stool. • In newborns, life-threatening bleeding within or around the brain may occur. 10-Jan-22 Biochemistry Spotting 36
  • 37. Answer • This is a case of vitamin K deficiency • A deficiency of vitamin K can lead to extreme bleeding, which can begin as a gum, nose discharge, bruising, bleeding in the cavities or internal hemorrhages. 10-Jan-22 Biochemistry Spotting 37
  • 39. Spot question • “Babies undergoing phototherapy for physiological jaundice are prone to develop riboflavin deficiency” • What might be the reason ? 10-Jan-22 Biochemistry Spotting 39
  • 40. Answer • Riboflavin is extremely light sensitive; therefore, upon exposure to blue light during phototherapy, it undergoes degradation. • Milk should be stored in containers that protect against photodegradation. 10-Jan-22 Biochemistry Spotting 40
  • 42. Spot diagnosis • A teenage girl presents with moderate to severe epigastric pain. • Physical examination reveals extensive eruptive xanthomas and hepatosplenomegaly. • A blood sample reveals milky plasma. • What might be the possible diagnosis ? 10-Jan-22 Biochemistry Spotting 42
  • 43. Answer • The clinical picture is suggestive of Familial lipoprotein lipase deficiency(hyperchylomicronemia). • A variant of this diseases can be produced by deficiency of apo CII. • It is present in early childhood, and is manifested by eruptive xanthomas, recurrent abdominal pain with no premature cardiovascular disease. 10-Jan-22 Biochemistry Spotting 43
  • 45. Make a diagnosis from the displayed clinical and laboratory findings. What is the underlying defect ? 10-Jan-22 Biochemistry Spotting 45
  • 46. Answer • This is clearly a case of congenital erythropoietic porphyria that occurs due to the deficiency of uroporphyrinogen III synthase enzyme. • Severe cutaneous hypersensitivity, Erythtrodontia (teeth are reddish- brown and fluoresce on exposure to long-wave ultraviolet light) and purple colored urine are suggestive of congenital erythropoietic porphyria . 10-Jan-22 Biochemistry Spotting 46
  • 48. State the diagnosis and mention the underlying defect S-4-
  • 49. Answer • The picture is indicative of xerophthalmia that occurs due to vitamin A deficiency. • Xerophthalmia results from keratinization of the conjunctiva. 10-Jan-22 Biochemistry Spotting 49