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Molecular Biology 1-5

         put together by: Linda Fahlberg-Stojanovska

    Disclaimer: I put these together for my kid for his smartphone.
 However, I found most images had very small type and increased the
font size. I am posting it because another teacher might find this useful.
                       The sources are given.
     If I have used anything illegally, write me and I will take it off.
Contents
• Tissues, Organs and Systems
• Connective Tissues
• Cell Adhesion
• Endocrine System + Hormones
• Circulatory System + Blood
Tissues, Organs and Systems
•   A tissue is a cellular organizational level intermediate
    between cells and a complete organism.
•   An organ is a collection of tissues joined in structural
    unit to serve a common function.
•   A biological system (or organ system or body
    system) is a group of organs that work together to
    perform a certain task
•   A group of systems composes an organism, e.g. the
    human body.
Systems of Human Body
•   Circulatory system
•   Digestive system
•   Endocrine system
•   Integumentary (skin) system
•   Lymphatic system
•   Muscular system/ Skeletal system
•   Nervous system
•   Reproductive system
•   Respiratory system
•   Excretory System / Urinary system
Tissues - Animal
• Tissue is a cellular organizational level
  intermediate between cells and a complete
  organism.
• Four basic types of animal tissue
  – epithelial tissue
  – connective tissue
  – muscle tissue and
  – nervous tissue
Epithelial Tissues
Epithelial tissues
•one of four basic types of tissue
•line the cavities and surfaces of structures throughout
the body,
•form many glands.
Functions of epithelial cells include
•secretion, selective absorption, protection,
transcellular transport and detection of sensation.
Connective Tissues
Connective tissues (CT)
•one of four basic types of animal tissue
•most diverse tissue, found throughout body

CT has 3 main components
•cells,
•fibers, and
•ground substance
(non-cellular material of extracellular matrix ECM)
Connective Tissues
Functions of connective tissues include
•Storage of energy
•Protection of organs
•Provide structural framework for the body
•Connection of body tissues.
Fibrous connective tissue proteins
   – Collagen
   – Elastin
   – Recticular
Proteins of Connective Tissue - Collagen
• Collagen is the main component of connective
  tissue, and is the most abundant protein in mammals,
  making up about 25% to 35% of the whole-body
  protein content.
• Collagen is a fibrous matrix protein found in fibrous
  tissues such as tendon, ligament and skin, and is also
  abundant in cornea, cartilage, bone, blood vessels, the
  gut, and intervertebral disc.
• The fibroblast is the cell which creates collagen.
Proteins of Connective Tissue - Proteoglycin
• Proteoglycans are the major component of the ground
  substance (non-cellular parts of ECM).
• They form large complexes, both to other
  proteoglycans, to hyaluronan and to fibrous matrix
  proteins (such as collagen).
• They are also involved in binding cations (such as
  sodium, potassium and calcium) and water, and also
  regulating the movement of molecules through the
  matrix.
Proteins of Connective Tissue - ECM
Proteins of Connective Tissue - Elastin
• Elastin is a fibrous matrix protein of connective tissue.
• Elastin is elastic - it allows many tissues in the body to
  resume their shape after stretching or contracting.
• Elastin helps skin to return to its original position when it
  is poked or pinched.
• Elastin is also an important load-bearing tissue in the
  bodies of vertebrates and
• It used in places where mechanical energy is required to
  be stored.
Proteins of Connective Tissue - Elastin
Tissues - Plant
Three basic types of plant tissue
•epidermis, the ground tissue, and the vascular tissue.

•Epidermis – forms the outer surface of the leaves and
of the young plant body.
•Ground tissue - manufactures and stores nutrients.
•Vascular tissue - The primary components are xylem
and phloem - transport fluid and nutrients internally.
Cell Adhesion - Connectivity
• Cell Adhesion is the binding of a cell
   – to another cell, a surface, or to the extracellular matrix.
• Cell Adhesion uses molecules such as
   – selectins,
   – integrins, and
   – cadherins
• Correct cellular adhesion is essential in maintaining
  multicellular structure. It can link the cytoplasm of cells
  and can be involved in signal transduction.
Cell Adhesion - Junctions
• A cell junction - is cell-to-cell adhesion in animals
  Plants have plasmodesmata.
In vertebrates, 3 major types of cell junctions:
• Tight junctions
• Adherens junctions and Desmosome junctions
  (Anchoring Junctions)
• Gap junctions
  (Communicating Junction)
Cell Connectivity - Junctions
Cell Connectivity - Cadherins
• Cadherins ("calcium-dependent adhesion") are a
  class of type-1 transmembrane proteins.
• They are dependent on calcium (Ca2+) ions to function
• The cadherin superfamily includes
   – cadherins,
   – protocadherins
   – desmosomes …
Tight Junctions
A tight junction
    is virtually
impenetrable to
       fluid.




         http://en.wikipedia.org/wiki/Tight_junction
Adherens Junction
   A adherens
  junction is a
“sticky” junction
    where the
transmembrane
  protein fibers
 adhere to each
   other in the
   extracellular
      matrix.



         http://en.wikipedia.org/wiki/Adherens_junction
Desmosome Junction
• A desmosome junction is an anchoring junction.
• Desmosomes help to resist shearing forces.
• The intercellular space is very wide (about 30 nm).
• Desmosomes are found in epithelial and in muscle
  tissue.
Desmosome Junction
•   Desmosomes
    are molecular
    complexes of
    cell adhesion
    proteins and
    linking proteins
    that attach the
    cell surface
    adhesion
    proteins to
    intracellular
    keratin
    cytoskeletal
    filaments.


                       http://en.wikipedia.org/wiki/Desmosome
Gap Junction
  A gap junction
directly connects
 the cytoplasm of
two cells allowing
various molecules
 and ions to pass
  between cells.
 Gap junctions are
  analogous to the
 plasmodesmata
that join plant cells.


                         http://en.wikipedia.org/wiki/Gap_junction
Cell–to–Cell Adhesion in Plants
• Plasmodesma is a microscopic channel which goes
  between the cell walls of plant cells enabling transport
  and communication between them.
• Plant cell is surrounded by a polysaccharide cell wall.
• Neighbouring plant cells are therefore separated by a
  pair of cell walls forming an extracellular domain
  divided by a lamella.
• The plasmodesmata connected t
Cell–to–Cell Adhesion in Plants




        http://en.wikipedia.org/wiki/Plasmodesma
Cell–to–Cell Adhesion in Plants
Endocrine System
               The endocrine
                system is the
              system of glands,
                each of which
             secretes a type of
             hormone directly
                   into the
               bloodstream to
             regulate the body.
              (Exocrine system
             uses ducts that open
                   into the
                environment.)
Hormones
• Hormones are substances produced by glands and
  released into the bloodstream. They affect activity in
  cells at other locations of the body.
• The binding of a hormone to a receptor speeds up,
  slows down, or in some other way alters the cell's
  function.
• Hormones bind to receptors
   – on a cell's surface (protein hormone) or
   – inside a cell (steroid hormone).
Hormones
• Hormones are either proteins or steroids.
• Hormones can also be classified by their chemical
  composition
• Monoamine hormones - contain one amino group that
  is connected to an aromatic ring by a two-carbon chain
• Peptide hormones are protein hormones and are
  synthesized in cells from amino acids according to an
  mRNA template, which is itself synthesized from a DNA.
• Lipid and phospholipid –derived hormones
   – Mainly steroid hormones.
Monoamine Hormones
• Monoamine hormones
  – Histamine
  – Catecholamines, e.g. Dopamine
  – Adrenaline, e.g. Epinephrine
Monoamine Hormones
Tyrosine (amino acid)
Peptide Hormones
• Peptide hormones consist of chains of amino acids.
   – Vasopressin is a peptide hormone that controls the
     reabsorption of molecules in the tubules of the kidneys by
     affecting the tissue's permeability.
      Vasopressin is nonapeptid (9 amino acids):
      Cys-Tyr-Phe-Gln-Asn-Cys-Pro-Arg-Gly

   – Insulin is a peptide hormone, produced by the pancreas, which
     is central to regulating carbohydrate and fat metabolism in
     the body. Insulin causes cells in the liver, muscle, and fat tissue
     to take up glucose from the blood, storing it as glycogen in the
     liver and muscle.
Peptide Hormones
• Peptide hormones
Lipid - Steroid Hormones
• Steroids are lipids with a characteristic arrangement of
  four cycloalkane rings.
• Steroids can be hormones or sterols (ex: cholesterol)
• Examples of steroid hormones:
Hormones
• Protein hormones bind with receptors on the surface of
  cells.
• Steroid hormones are small molecules that are fat-
  soluble (and thus easily diffuse through cell walls to bind
  with receptors inside of cells
Protein Hormones
Protein hormones bind to receptors on surface of cells.




                    http://www.emcom.ca/faq/ans3.shtml
Protein Hormones
Protein hormones bind to receptors on surface of cells.




                     http://www.emcom.ca/faq/ans3.shtml
Protein Hormones
Protein hormones bind to receptors on surface of cells.
Steroid Hormones
Steroid hormones bind to receptors inside cells.
Circulatory System
The circulatory system is an organ system helps
maintain homeostasis and fight disease by
passing
•nutrients such as amino acids, electrolytes and lymph,
•gases such as O2 and CO2
•hormones and
•blood cells, etc.
to and from cells in the body.
Blood Clotting Cascade

• Thrombin is the most important constituent of the
  coagulation cascade in terms of its feedback and
  activation roles
• Tissue factor pathway (extrinsic) – primary pathway
   – The main role of the tissue factor pathway is to generate a "thrombin
     burst" in releasing thrombin instantaneously.
• Contact activation pathway (intrinsic) - secondary
   – formation of complex on collagen
• Common pathway – here thrombin performs its
  primary role which is to convert fibrinogen to fibrin,
  the building block of a hemostatic plug.

                             http://en.wikipedia.org/wiki/Coagulation
Blood Clotting Cascade

• Coagulation is the process by which blood forms
  clots.
• It is an important part of hemostasis, the stopping of
  blood loss from a damaged vessel.
• In coagulation, a damaged blood vessel wall is covered
  by a platelet and fibrin-containing clot to stop
  bleeding and begin repair of the damaged vessel.
• Disorders of coagulation can lead to an increased
  risk of bleeding (hemorrhage) or obstructive clotting
  (thrombosis).
Blood Clotting Cascade




       http://en.wikipedia.org/wiki/Coagulation
Blood Cells


• leukocytes WBC
    (natural immune response)

• thrombocytes - platelets
    (blood clotting)

• erythrocytes RBC
    (oxygen transport)




http://shs-bio-6th-wood.wikispaces.com/Topic+16-Blood-+Erythrocytes,+Leukocytes,+Platelets,+%26+Plasma
Blood Separation




  http://en.wikipedia.org/wiki/Buffy_coat
Blood Separation

• Three anticoagulants can be used to inhibit
  coagulation in donor blood
• EDTA
   – removes calcium from the blood, but does not distort blood
     cells.
• Heparin
   – Stops the formation of thrombin from prothrombin therefore
     stopping formation of fibrin from fibrinogen
• Na-Citrate
   – removes calcium from the blood, but not as effective as
     EDTA and harder to regulate.

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Molecular Biology 1-5

  • 1. Molecular Biology 1-5 put together by: Linda Fahlberg-Stojanovska Disclaimer: I put these together for my kid for his smartphone. However, I found most images had very small type and increased the font size. I am posting it because another teacher might find this useful. The sources are given. If I have used anything illegally, write me and I will take it off.
  • 2. Contents • Tissues, Organs and Systems • Connective Tissues • Cell Adhesion • Endocrine System + Hormones • Circulatory System + Blood
  • 3. Tissues, Organs and Systems • A tissue is a cellular organizational level intermediate between cells and a complete organism. • An organ is a collection of tissues joined in structural unit to serve a common function. • A biological system (or organ system or body system) is a group of organs that work together to perform a certain task • A group of systems composes an organism, e.g. the human body.
  • 4. Systems of Human Body • Circulatory system • Digestive system • Endocrine system • Integumentary (skin) system • Lymphatic system • Muscular system/ Skeletal system • Nervous system • Reproductive system • Respiratory system • Excretory System / Urinary system
  • 5. Tissues - Animal • Tissue is a cellular organizational level intermediate between cells and a complete organism. • Four basic types of animal tissue – epithelial tissue – connective tissue – muscle tissue and – nervous tissue
  • 6. Epithelial Tissues Epithelial tissues •one of four basic types of tissue •line the cavities and surfaces of structures throughout the body, •form many glands. Functions of epithelial cells include •secretion, selective absorption, protection, transcellular transport and detection of sensation.
  • 7. Connective Tissues Connective tissues (CT) •one of four basic types of animal tissue •most diverse tissue, found throughout body CT has 3 main components •cells, •fibers, and •ground substance (non-cellular material of extracellular matrix ECM)
  • 8. Connective Tissues Functions of connective tissues include •Storage of energy •Protection of organs •Provide structural framework for the body •Connection of body tissues. Fibrous connective tissue proteins – Collagen – Elastin – Recticular
  • 9. Proteins of Connective Tissue - Collagen • Collagen is the main component of connective tissue, and is the most abundant protein in mammals, making up about 25% to 35% of the whole-body protein content. • Collagen is a fibrous matrix protein found in fibrous tissues such as tendon, ligament and skin, and is also abundant in cornea, cartilage, bone, blood vessels, the gut, and intervertebral disc. • The fibroblast is the cell which creates collagen.
  • 10. Proteins of Connective Tissue - Proteoglycin • Proteoglycans are the major component of the ground substance (non-cellular parts of ECM). • They form large complexes, both to other proteoglycans, to hyaluronan and to fibrous matrix proteins (such as collagen). • They are also involved in binding cations (such as sodium, potassium and calcium) and water, and also regulating the movement of molecules through the matrix.
  • 11. Proteins of Connective Tissue - ECM
  • 12. Proteins of Connective Tissue - Elastin • Elastin is a fibrous matrix protein of connective tissue. • Elastin is elastic - it allows many tissues in the body to resume their shape after stretching or contracting. • Elastin helps skin to return to its original position when it is poked or pinched. • Elastin is also an important load-bearing tissue in the bodies of vertebrates and • It used in places where mechanical energy is required to be stored.
  • 13. Proteins of Connective Tissue - Elastin
  • 14. Tissues - Plant Three basic types of plant tissue •epidermis, the ground tissue, and the vascular tissue. •Epidermis – forms the outer surface of the leaves and of the young plant body. •Ground tissue - manufactures and stores nutrients. •Vascular tissue - The primary components are xylem and phloem - transport fluid and nutrients internally.
  • 15. Cell Adhesion - Connectivity • Cell Adhesion is the binding of a cell – to another cell, a surface, or to the extracellular matrix. • Cell Adhesion uses molecules such as – selectins, – integrins, and – cadherins • Correct cellular adhesion is essential in maintaining multicellular structure. It can link the cytoplasm of cells and can be involved in signal transduction.
  • 16. Cell Adhesion - Junctions • A cell junction - is cell-to-cell adhesion in animals Plants have plasmodesmata. In vertebrates, 3 major types of cell junctions: • Tight junctions • Adherens junctions and Desmosome junctions (Anchoring Junctions) • Gap junctions (Communicating Junction)
  • 17. Cell Connectivity - Junctions
  • 18. Cell Connectivity - Cadherins • Cadherins ("calcium-dependent adhesion") are a class of type-1 transmembrane proteins. • They are dependent on calcium (Ca2+) ions to function • The cadherin superfamily includes – cadherins, – protocadherins – desmosomes …
  • 19. Tight Junctions A tight junction is virtually impenetrable to fluid. http://en.wikipedia.org/wiki/Tight_junction
  • 20. Adherens Junction A adherens junction is a “sticky” junction where the transmembrane protein fibers adhere to each other in the extracellular matrix. http://en.wikipedia.org/wiki/Adherens_junction
  • 21. Desmosome Junction • A desmosome junction is an anchoring junction. • Desmosomes help to resist shearing forces. • The intercellular space is very wide (about 30 nm). • Desmosomes are found in epithelial and in muscle tissue.
  • 22. Desmosome Junction • Desmosomes are molecular complexes of cell adhesion proteins and linking proteins that attach the cell surface adhesion proteins to intracellular keratin cytoskeletal filaments. http://en.wikipedia.org/wiki/Desmosome
  • 23. Gap Junction A gap junction directly connects the cytoplasm of two cells allowing various molecules and ions to pass between cells. Gap junctions are analogous to the plasmodesmata that join plant cells. http://en.wikipedia.org/wiki/Gap_junction
  • 24. Cell–to–Cell Adhesion in Plants • Plasmodesma is a microscopic channel which goes between the cell walls of plant cells enabling transport and communication between them. • Plant cell is surrounded by a polysaccharide cell wall. • Neighbouring plant cells are therefore separated by a pair of cell walls forming an extracellular domain divided by a lamella. • The plasmodesmata connected t
  • 25. Cell–to–Cell Adhesion in Plants http://en.wikipedia.org/wiki/Plasmodesma
  • 27. Endocrine System The endocrine system is the system of glands, each of which secretes a type of hormone directly into the bloodstream to regulate the body. (Exocrine system uses ducts that open into the environment.)
  • 28. Hormones • Hormones are substances produced by glands and released into the bloodstream. They affect activity in cells at other locations of the body. • The binding of a hormone to a receptor speeds up, slows down, or in some other way alters the cell's function. • Hormones bind to receptors – on a cell's surface (protein hormone) or – inside a cell (steroid hormone).
  • 29. Hormones • Hormones are either proteins or steroids. • Hormones can also be classified by their chemical composition • Monoamine hormones - contain one amino group that is connected to an aromatic ring by a two-carbon chain • Peptide hormones are protein hormones and are synthesized in cells from amino acids according to an mRNA template, which is itself synthesized from a DNA. • Lipid and phospholipid –derived hormones – Mainly steroid hormones.
  • 30. Monoamine Hormones • Monoamine hormones – Histamine – Catecholamines, e.g. Dopamine – Adrenaline, e.g. Epinephrine
  • 32. Peptide Hormones • Peptide hormones consist of chains of amino acids. – Vasopressin is a peptide hormone that controls the reabsorption of molecules in the tubules of the kidneys by affecting the tissue's permeability. Vasopressin is nonapeptid (9 amino acids): Cys-Tyr-Phe-Gln-Asn-Cys-Pro-Arg-Gly – Insulin is a peptide hormone, produced by the pancreas, which is central to regulating carbohydrate and fat metabolism in the body. Insulin causes cells in the liver, muscle, and fat tissue to take up glucose from the blood, storing it as glycogen in the liver and muscle.
  • 34. Lipid - Steroid Hormones • Steroids are lipids with a characteristic arrangement of four cycloalkane rings. • Steroids can be hormones or sterols (ex: cholesterol) • Examples of steroid hormones:
  • 35. Hormones • Protein hormones bind with receptors on the surface of cells. • Steroid hormones are small molecules that are fat- soluble (and thus easily diffuse through cell walls to bind with receptors inside of cells
  • 36. Protein Hormones Protein hormones bind to receptors on surface of cells. http://www.emcom.ca/faq/ans3.shtml
  • 37. Protein Hormones Protein hormones bind to receptors on surface of cells. http://www.emcom.ca/faq/ans3.shtml
  • 38. Protein Hormones Protein hormones bind to receptors on surface of cells.
  • 39. Steroid Hormones Steroid hormones bind to receptors inside cells.
  • 40. Circulatory System The circulatory system is an organ system helps maintain homeostasis and fight disease by passing •nutrients such as amino acids, electrolytes and lymph, •gases such as O2 and CO2 •hormones and •blood cells, etc. to and from cells in the body.
  • 41. Blood Clotting Cascade • Thrombin is the most important constituent of the coagulation cascade in terms of its feedback and activation roles • Tissue factor pathway (extrinsic) – primary pathway – The main role of the tissue factor pathway is to generate a "thrombin burst" in releasing thrombin instantaneously. • Contact activation pathway (intrinsic) - secondary – formation of complex on collagen • Common pathway – here thrombin performs its primary role which is to convert fibrinogen to fibrin, the building block of a hemostatic plug. http://en.wikipedia.org/wiki/Coagulation
  • 42. Blood Clotting Cascade • Coagulation is the process by which blood forms clots. • It is an important part of hemostasis, the stopping of blood loss from a damaged vessel. • In coagulation, a damaged blood vessel wall is covered by a platelet and fibrin-containing clot to stop bleeding and begin repair of the damaged vessel. • Disorders of coagulation can lead to an increased risk of bleeding (hemorrhage) or obstructive clotting (thrombosis).
  • 43. Blood Clotting Cascade http://en.wikipedia.org/wiki/Coagulation
  • 44. Blood Cells • leukocytes WBC (natural immune response) • thrombocytes - platelets (blood clotting) • erythrocytes RBC (oxygen transport) http://shs-bio-6th-wood.wikispaces.com/Topic+16-Blood-+Erythrocytes,+Leukocytes,+Platelets,+%26+Plasma
  • 45. Blood Separation http://en.wikipedia.org/wiki/Buffy_coat
  • 46. Blood Separation • Three anticoagulants can be used to inhibit coagulation in donor blood • EDTA – removes calcium from the blood, but does not distort blood cells. • Heparin – Stops the formation of thrombin from prothrombin therefore stopping formation of fibrin from fibrinogen • Na-Citrate – removes calcium from the blood, but not as effective as EDTA and harder to regulate.