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Publishing and ‘impact’ 
Information Literacy PhD students
Programme 
 Publishing 
 Metrics 
● Article metrics 
● Author metrics 
● Journal metrics 
● Research group metrics
Programme 
 Publishing 
 Metrics 
● Article metrics 
● Author metrics 
● Journal metrics 
● Research group metrics
Motives for publishing 
Edge, P., Martin, F., Fao, S. R., & Manning, N. (2011). 
Researcher Attitudes and Behaviour Towards the “ Openness ” of Research Outputs in 
Agriculture and Related Fields.
Motives for publishing
Types of publications 
 Reports 
 Conference proceedings 
 Books/book chapters 
 Journals 
● Professional journals 
● Scholarly journals
(Scientific journals) Peer review 
 Peer review is the corner stone of scholarly quality 
control 
● Publications 
● Research proposals/grants 
● Research institutions/universities 
 More info 
● http://www.rin.ac.uk/peer-review-guide 
● Course on Peer Review organized by WGS
Choosing the right journal to publish 
 Many factors influence journal selection 
● Journal scope/Intended audience 
● Editorial board/standing 
● Open Access 
● The speed of reviewing and publication 
● Acceptance/Rejection rate 
● Journal circulation 
● Coverage in A&I databases (bibliographies) 
● Journal performance
Information "about" journals
Open Access 
 OA publishing e.g. PLoS, BMC and Sage Open 
 Self-archiving in repositories e.g. Wageningen Yield 
(WaY) 
 SHERPA/RoMEO: Publisher copyright policies & self-archiving 
http://www.sherpa.ac.uk/romeo/ 
 Directory of open access journals DOAJ (currently ca. 
10,000 journals) 
 Be aware of predatory OA publishers
“Predatory publishers”
“Green” open access: deposit author 
versions to WaY 
See: http://edepot.wur.nl/169331 
Send your version of the article to: way.libray@wur.nl
Speed of publication 
 PLoS One 
 Euphytica
Rejection / acceptance rates 
 Sugimoto, C. R., Larivière, V., Ni, C., & Cronin, B. (2013). Journal acceptance rates: A cross-disciplinary analysis of 
variability and relationships with journal measures. Journal of Informetrics, 7(4), 897–906. doi:10.1016/j.joi.2013.08.007
Rejection / acceptance rates
Rejection / acceptance rates
Journal circulation 
 Compare e.g. 
● “Agricultural Systems” 
● "Proceedings of the National Academy of Sciences 
of the United States of America"
Coverage in A&I databases
Making your publicatns known: networking
Making your publications known: 
cooperation 
WTI2 report 2011 
UNIV. 
Single Author 
address 
National 
copublication 
International 
copublication 
EUR 1.16 1.23 1.92 
RUG 1.15 1.19 1.62 
RUN 1.14 1.18 1.81 
TUD 1.27 1.12 1.36 
TUE 1.27 1.30 1.49 
LEI 1.18 1.26 1.72 
MAA 0.91 1.19 1.51 
TUT 1.20 1.32 1.42 
UU 1.83 1.28 1.74 
UVA 0.98 1.20 1.67 
TIU 1.09 0.98 1.19 
VU 1.21 1.26 1.66 
WUR 1.19 1.43 1.49 
Avg 1.20 1.23 1.58
Cooperation 
 Teams increasingly dominate solo authors in the 
production of knowledge. Research is increasingly done 
in teams across nearly all fields. 
 Teams typically produce more frequently cited research 
than individuals do, and this advantage has been 
increasing over time. 
 Teams now also produce the exceptionally high-impact 
research, even where that distinction was once the 
domain of solo authors. 
Wuchty, S., B. F. Jones, et al. (2007). The increasing dominance of teams in 
production of knowledge. Science 316(5827): 1036-1039. 
http://dx.doi.org/10.1126/science.1136099
Additional information 
 http://wageningenur.nl/library 
● Write & Cite a.o. 
● Publishing and impact 
● Copyright 
● Open Access 
● PhD theses submission
Advertise yourself 
 Cite your previous articles! 
 Be active at conferences 
 Cooperate with other people/research groups 
 Write, or expand, articles in the Wikipedia, refer to your 
thesis. 
 Blog or tweet about your research and thesis research 
 Make use of social networking tools (LinkedIn, 
Researchgate.net, Mendeley etc.) 
 Create author’s identifiers (ScopusID, Researcher ID, 
ORCID)
What's in a name 
 On the cover: 
● Arina Schrier 
 First first title page: 
● A.P. Schrier-Uyl 
 Second title page: 
● Adriana Pia Uyl 
 In here own publication list 
● A. Uyl 
● A. Uijl 
● A.P. Schrier Uyl
This also applies to the names of groups 
Environmental Policy Group, Department of Social Sciences, Wageningen University 
Environmental Policy Group, Wageningen University 
Environmental Policy Group, Wageningen University and Research Centre 
Environmental Policy Group, Wageningen UR
Get your affiliation right 
For the university: 
Chair group + Wageningen University 
Plant Production Systems Group, Wageningen University, 
P.O. box ..., 6700 HA Wageningen, The Netherlands 
For the institutes: 
Institute + Wageningen University & Research Centre 
Alterra, Wageningen University & Research Centre, P.O. 
box ..., 6700 HA Wageningen, The Netherlands
Exercises 
 Manual Chapter 9.8 
● Exercise 1
Programme 
 Publishing 
 Metrics 
● Article metrics 
● Author metrics 
● Journal metrics 
● Research group metrics
Web of Science 
 Search: 
● Articles are found based on Authors, Addresses, 
etc. 
● For each article Times cited is presented 
 Cited reference search: 
● Searches in the reference lists of records 
● Not all of your articles are found. Non-cited articles 
are missing
Beeldvullende foto met titel
How do we compare numbers 
 Scientist Z. Math has a publication from 2003 with 17 
citations 
 Scientist M. Biology has a publication from 2009 with 24 
citations
Baselines for Mathematics
Baselines for Molecular Biology 
400 
300 
200 
100 
0 
0 2 4 6 8 10 12 
Years after publication 
Cumulative no. citations 
Baseline 
top 10% 
top 1%
Citation enhanced A&I databases 
 Web of Science 
● Based on ± 12000 journals 
● Metrics: Impact factor 
● Baselines per ‘discipline’ (ESI) 
● Analysis tools (Insight) 
 Scopus 
● Based on ± 19000 journals + other 
publication types 
● Metrics: SNIP and SJR 
● Baselines + analysis tool (Scival) 
 Google Scholar (http://scholar.google.com) 
● Based on unknown journals + many 
other things 
● No baselines 
There are other citation 
enhanced databases: 
PsychInfo, 
SciFinder (Chemical abstracts) 
ArXiv (Physics) 
Spires (high energy physics) 
Citeseer (ICT)
Programme 
 Publishing 
 Metrics 
● Article metrics 
● Author metrics 
● Research group metrics
Bibliometric indicators: An example 
 Kroes-Nijboer, A; Venema, P; Bouman, J; van der Linden, E 
(2009) The Critical Aggregation Concentration of beta- 
Lactoglobulin-Based Fibril Formation. Food Biophysics 4(2):59- 
63. 
● Citations from WoS: 11 
 Journal: Food Biophysics 
● Categorised by ESI in Agricultural Sciences 
 Baseline data for Agricultural Sciences. 
● Article from 2009 in Agricultural Sciences: 
● On average: 5.47 citations; top 10%: 14 citations; top 
1%: 34 citations 
 Relative Impact: 11/5.47 = 2.01 Values June 2013
Essential Science Indicators (ESI) 
 Analytical database, covering 10 years + current year 
building 
 Comparisons between Countries, Institutes, Scientists 
and Journals 
 Hot papers / Highly cited papers 
 Research fronts 
 Baselines
ESI Baselines
Alternative to ESI: Scival (Elsevier)
Alternative to ESI: Scival (Elsevier)
Steps in a citation analysis 
1. Look up the citation data (Web of Science) 
2. Matching Journal(s) with appropriate research fields 
(Essential Science Indicators) 
3. Collect baseline data (Essential Science Indicators) 
4. Calculate the relative impact
Exercises 
 Manual Chapter 9.8 
● Exercise 2: Number of publications and times cited 
● Exercise 2.1 
● Exercise 2.2 is optional
Exercises 
 Manual Chapter 9.8 
● Exercise 3: Citation impact and rankings (Essential 
Science Indicators) 
● Exercise 3.1a (3.1b optional)
Programme 
 Publishing 
 Metrics 
● Article metrics 
● Author metrics 
● Journal metrics 
● Research group metrics
H-index 
 Balance between productivity 
and citedness 
 To rule out the effect of one 
or two highly cited papers 
 Applicable to authors, 
journals, research groups, 
compounds, subjects etc. 
 But there are some serious 
doubts about robustness 
Waltman, L. & N. J. van Eck (2011). The inconsistency of 
the h-index. Journal of the American Society for 
Information Science and Technology 63(2):406-415 
http://dx.doi.org/10.1002/asi.21678
H-index
Omnipresent h-index 
54 47 
57
Programme 
 Publishing 
 Metrics 
● Article metrics 
● Author metrics 
● Journal metrics 
● Research group metrics
Journal Performance Indicators 
 Journal performance indicators are based on citations to 
articles 
 Journal Citation Reports (JCR) 
● a.o. standard Journal Impact Factors and 5-year 
Impact Factors 
 Scopus Journal Analyzer (SJA) 
● a.o. SCImago Journal Rank (SJR) and Source 
Normalized Impact per Paper (SNIP) 
● Also available on http://journalmetrics.com/
Journal Citation Reports (JCR) 
Reports three measures 
 Impact factor 
 Immediacy Index 
 Cited half life 
Adapted from: Amin, M and Mabe, M. (2000) Impact factors: use 
and abuse. Perspectives in Publishing, No. 1, 6 pp. 
http://www.elsevier.com/framework_editors/pdfs/Perspectives1.pdf
IF in 2011 for Agricultural Systems
Selecting journals on the basis of IF 
 Word of warning 
● Our opinion: Be careful when using Journal Impact 
factors to judge the performance of a group or 
individual scientist 
● Used for NWO grant applications and Tenure track 
at Wageningen UR 
Opthof, T. (1997) Sense and nonsense about he impact factor. Cardiovascular Research, 
33(1): 1-7 http://dx.doi.org/10.1016/S0008-6363(96)00215-5
Q1 
Q2 
Q3 
Q4
Exercises 
 Manual Chapter 9.8 
● Exercise 4: Journal Citation Reports (JCR)
Programme 
 Publishing 
 Metrics 
● Article metrics 
● Author metrics 
● Journal metrics 
● Research group metrics
Journal quality and article impact 2003- 
2009, for Wageningen UR 
Source: Wageningen Yield, Feb. 2012
Bibliometric analysis
Increase in share of Q1 articles at 
WageningenUR
Journal selection affects Relative Impact
Journal selection affects Relative Impact 
2010 
2011 
2003
Interpretation of RI for small groups 
 With 10-50 publications per year 
RI ≤ 0.8 : below world average impact 
0.8 < RI ≤ 1.2 : world average impact 
1.2 < RI ≤ 2.0 : above world average impact 
2.0 < RI ≤ 3.0 : very good average impact 
RI > 3.0 : excellent average impact
Exercises 
 
● Exercise 5: (Group) Bibliometric analysis
Thank you! 
http://www.slideshare.net/hugobesemer

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Publishing and impact 20141028

  • 1. Publishing and ‘impact’ Information Literacy PhD students
  • 2. Programme  Publishing  Metrics ● Article metrics ● Author metrics ● Journal metrics ● Research group metrics
  • 3. Programme  Publishing  Metrics ● Article metrics ● Author metrics ● Journal metrics ● Research group metrics
  • 4. Motives for publishing Edge, P., Martin, F., Fao, S. R., & Manning, N. (2011). Researcher Attitudes and Behaviour Towards the “ Openness ” of Research Outputs in Agriculture and Related Fields.
  • 6. Types of publications  Reports  Conference proceedings  Books/book chapters  Journals ● Professional journals ● Scholarly journals
  • 7. (Scientific journals) Peer review  Peer review is the corner stone of scholarly quality control ● Publications ● Research proposals/grants ● Research institutions/universities  More info ● http://www.rin.ac.uk/peer-review-guide ● Course on Peer Review organized by WGS
  • 8. Choosing the right journal to publish  Many factors influence journal selection ● Journal scope/Intended audience ● Editorial board/standing ● Open Access ● The speed of reviewing and publication ● Acceptance/Rejection rate ● Journal circulation ● Coverage in A&I databases (bibliographies) ● Journal performance
  • 10. Open Access  OA publishing e.g. PLoS, BMC and Sage Open  Self-archiving in repositories e.g. Wageningen Yield (WaY)  SHERPA/RoMEO: Publisher copyright policies & self-archiving http://www.sherpa.ac.uk/romeo/  Directory of open access journals DOAJ (currently ca. 10,000 journals)  Be aware of predatory OA publishers
  • 12. “Green” open access: deposit author versions to WaY See: http://edepot.wur.nl/169331 Send your version of the article to: way.libray@wur.nl
  • 13. Speed of publication  PLoS One  Euphytica
  • 14. Rejection / acceptance rates  Sugimoto, C. R., Larivière, V., Ni, C., & Cronin, B. (2013). Journal acceptance rates: A cross-disciplinary analysis of variability and relationships with journal measures. Journal of Informetrics, 7(4), 897–906. doi:10.1016/j.joi.2013.08.007
  • 17. Journal circulation  Compare e.g. ● “Agricultural Systems” ● "Proceedings of the National Academy of Sciences of the United States of America"
  • 18. Coverage in A&I databases
  • 19. Making your publicatns known: networking
  • 20. Making your publications known: cooperation WTI2 report 2011 UNIV. Single Author address National copublication International copublication EUR 1.16 1.23 1.92 RUG 1.15 1.19 1.62 RUN 1.14 1.18 1.81 TUD 1.27 1.12 1.36 TUE 1.27 1.30 1.49 LEI 1.18 1.26 1.72 MAA 0.91 1.19 1.51 TUT 1.20 1.32 1.42 UU 1.83 1.28 1.74 UVA 0.98 1.20 1.67 TIU 1.09 0.98 1.19 VU 1.21 1.26 1.66 WUR 1.19 1.43 1.49 Avg 1.20 1.23 1.58
  • 21. Cooperation  Teams increasingly dominate solo authors in the production of knowledge. Research is increasingly done in teams across nearly all fields.  Teams typically produce more frequently cited research than individuals do, and this advantage has been increasing over time.  Teams now also produce the exceptionally high-impact research, even where that distinction was once the domain of solo authors. Wuchty, S., B. F. Jones, et al. (2007). The increasing dominance of teams in production of knowledge. Science 316(5827): 1036-1039. http://dx.doi.org/10.1126/science.1136099
  • 22. Additional information  http://wageningenur.nl/library ● Write & Cite a.o. ● Publishing and impact ● Copyright ● Open Access ● PhD theses submission
  • 23. Advertise yourself  Cite your previous articles!  Be active at conferences  Cooperate with other people/research groups  Write, or expand, articles in the Wikipedia, refer to your thesis.  Blog or tweet about your research and thesis research  Make use of social networking tools (LinkedIn, Researchgate.net, Mendeley etc.)  Create author’s identifiers (ScopusID, Researcher ID, ORCID)
  • 24. What's in a name  On the cover: ● Arina Schrier  First first title page: ● A.P. Schrier-Uyl  Second title page: ● Adriana Pia Uyl  In here own publication list ● A. Uyl ● A. Uijl ● A.P. Schrier Uyl
  • 25. This also applies to the names of groups Environmental Policy Group, Department of Social Sciences, Wageningen University Environmental Policy Group, Wageningen University Environmental Policy Group, Wageningen University and Research Centre Environmental Policy Group, Wageningen UR
  • 26. Get your affiliation right For the university: Chair group + Wageningen University Plant Production Systems Group, Wageningen University, P.O. box ..., 6700 HA Wageningen, The Netherlands For the institutes: Institute + Wageningen University & Research Centre Alterra, Wageningen University & Research Centre, P.O. box ..., 6700 HA Wageningen, The Netherlands
  • 27. Exercises  Manual Chapter 9.8 ● Exercise 1
  • 28. Programme  Publishing  Metrics ● Article metrics ● Author metrics ● Journal metrics ● Research group metrics
  • 29. Web of Science  Search: ● Articles are found based on Authors, Addresses, etc. ● For each article Times cited is presented  Cited reference search: ● Searches in the reference lists of records ● Not all of your articles are found. Non-cited articles are missing
  • 31. How do we compare numbers  Scientist Z. Math has a publication from 2003 with 17 citations  Scientist M. Biology has a publication from 2009 with 24 citations
  • 33. Baselines for Molecular Biology 400 300 200 100 0 0 2 4 6 8 10 12 Years after publication Cumulative no. citations Baseline top 10% top 1%
  • 34. Citation enhanced A&I databases  Web of Science ● Based on ± 12000 journals ● Metrics: Impact factor ● Baselines per ‘discipline’ (ESI) ● Analysis tools (Insight)  Scopus ● Based on ± 19000 journals + other publication types ● Metrics: SNIP and SJR ● Baselines + analysis tool (Scival)  Google Scholar (http://scholar.google.com) ● Based on unknown journals + many other things ● No baselines There are other citation enhanced databases: PsychInfo, SciFinder (Chemical abstracts) ArXiv (Physics) Spires (high energy physics) Citeseer (ICT)
  • 35. Programme  Publishing  Metrics ● Article metrics ● Author metrics ● Research group metrics
  • 36. Bibliometric indicators: An example  Kroes-Nijboer, A; Venema, P; Bouman, J; van der Linden, E (2009) The Critical Aggregation Concentration of beta- Lactoglobulin-Based Fibril Formation. Food Biophysics 4(2):59- 63. ● Citations from WoS: 11  Journal: Food Biophysics ● Categorised by ESI in Agricultural Sciences  Baseline data for Agricultural Sciences. ● Article from 2009 in Agricultural Sciences: ● On average: 5.47 citations; top 10%: 14 citations; top 1%: 34 citations  Relative Impact: 11/5.47 = 2.01 Values June 2013
  • 37. Essential Science Indicators (ESI)  Analytical database, covering 10 years + current year building  Comparisons between Countries, Institutes, Scientists and Journals  Hot papers / Highly cited papers  Research fronts  Baselines
  • 39. Alternative to ESI: Scival (Elsevier)
  • 40. Alternative to ESI: Scival (Elsevier)
  • 41. Steps in a citation analysis 1. Look up the citation data (Web of Science) 2. Matching Journal(s) with appropriate research fields (Essential Science Indicators) 3. Collect baseline data (Essential Science Indicators) 4. Calculate the relative impact
  • 42. Exercises  Manual Chapter 9.8 ● Exercise 2: Number of publications and times cited ● Exercise 2.1 ● Exercise 2.2 is optional
  • 43. Exercises  Manual Chapter 9.8 ● Exercise 3: Citation impact and rankings (Essential Science Indicators) ● Exercise 3.1a (3.1b optional)
  • 44. Programme  Publishing  Metrics ● Article metrics ● Author metrics ● Journal metrics ● Research group metrics
  • 45. H-index  Balance between productivity and citedness  To rule out the effect of one or two highly cited papers  Applicable to authors, journals, research groups, compounds, subjects etc.  But there are some serious doubts about robustness Waltman, L. & N. J. van Eck (2011). The inconsistency of the h-index. Journal of the American Society for Information Science and Technology 63(2):406-415 http://dx.doi.org/10.1002/asi.21678
  • 48. Programme  Publishing  Metrics ● Article metrics ● Author metrics ● Journal metrics ● Research group metrics
  • 49. Journal Performance Indicators  Journal performance indicators are based on citations to articles  Journal Citation Reports (JCR) ● a.o. standard Journal Impact Factors and 5-year Impact Factors  Scopus Journal Analyzer (SJA) ● a.o. SCImago Journal Rank (SJR) and Source Normalized Impact per Paper (SNIP) ● Also available on http://journalmetrics.com/
  • 50. Journal Citation Reports (JCR) Reports three measures  Impact factor  Immediacy Index  Cited half life Adapted from: Amin, M and Mabe, M. (2000) Impact factors: use and abuse. Perspectives in Publishing, No. 1, 6 pp. http://www.elsevier.com/framework_editors/pdfs/Perspectives1.pdf
  • 51. IF in 2011 for Agricultural Systems
  • 52. Selecting journals on the basis of IF  Word of warning ● Our opinion: Be careful when using Journal Impact factors to judge the performance of a group or individual scientist ● Used for NWO grant applications and Tenure track at Wageningen UR Opthof, T. (1997) Sense and nonsense about he impact factor. Cardiovascular Research, 33(1): 1-7 http://dx.doi.org/10.1016/S0008-6363(96)00215-5
  • 53. Q1 Q2 Q3 Q4
  • 54. Exercises  Manual Chapter 9.8 ● Exercise 4: Journal Citation Reports (JCR)
  • 55. Programme  Publishing  Metrics ● Article metrics ● Author metrics ● Journal metrics ● Research group metrics
  • 56. Journal quality and article impact 2003- 2009, for Wageningen UR Source: Wageningen Yield, Feb. 2012
  • 58. Increase in share of Q1 articles at WageningenUR
  • 59. Journal selection affects Relative Impact
  • 60. Journal selection affects Relative Impact 2010 2011 2003
  • 61. Interpretation of RI for small groups  With 10-50 publications per year RI ≤ 0.8 : below world average impact 0.8 < RI ≤ 1.2 : world average impact 1.2 < RI ≤ 2.0 : above world average impact 2.0 < RI ≤ 3.0 : very good average impact RI > 3.0 : excellent average impact
  • 62. Exercises  ● Exercise 5: (Group) Bibliometric analysis

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