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Because good research needs good data




Why manage research data?
The research data phenomenon and the role of the
             Digital Curation Centre




                                                                                           Funded by
     This work is licensed under a Creative Commons Attribution 2.5 UK: Scotland License
The Digital Curation Centre is
• a consortium comprising units from the Universities of
  Bath (UKOLN), Edinburgh (DCC Centre) and Glasgow
  (HATII)
• launched 1st March 2004 as a national centre for
  solving challenges in digital curation that could not be
  tackled by any single institution or discipline
• funded by JISC
• with additional HEFCE funding from 2011 for
   • the provision of support to national cloud services
   • targeted institutional development
The DCC Mission


         Helping to build capacity,
        capability and skills in data
        management and curation
          across the UK’s higher
      education research community




                  – DCC Phase 3
                   Business Plan
DCC institutional stakeholders

         University managers



         Researchers


                                     • University libraries
         Research support
                                     • IT services
         staff with a role to play
                                     • The research and
         in data management,           innovation office
         particularly those from     • Digital repositories
Why manage research data?
The impact of e-Science and the global network
• “Research data is a form of infrastructure, the basis
  for data intensive research across many domains” –
  EC Riding the Wave report, 2010
• “Funders expect research to be international in
  scope. A third of all articles published are
  internationally collaborative” – Royal Society, 2011

The governmental and funder imperative
• “Publicly-funded research data must be made
  available for secondary scientific research” – ESRC
  research data policy
Why manage research data?
The researcher incentive
• “By making their data available via licensed
  platforms researchers stand to improve their
  status as researchers through the mandatory
  citing and attribution of their original work”
  – Mark Hahnel, FigShare, IDCC 2011
Why manage research data?
The researcher incentive
• “By making their data available via licensed
  platforms researchers stand to improve their
  status as researchers through the mandatory
  citing and attribution of their original work”
  – Mark Hahnel, FigShare, IDCC 2011

The same demanding, sometimes competing
community of perspectives that the Digital Curation
Centre was created to unravel…
Where is the data in research?




  The six datacentric phases of the research lifecycle
Reflections: the research data lifecycle
Three perspectives
 Scale and complexity
   – Volume and pace
   – Infrastructure
   – Open science
 Policy
   – Funders
   – Institutions
   – Ethics & IP
 Management
   – Storage
   – Incentives
   – Costs & Sustainability
                              http://www.nonsolotigullio.com/effettiottici/images/escher.jpg/
Challenges of scale and complexity
           • The virtual laboratory is a federation
              of server nodes that allows
• Globally, >100,000
              distributed data to be stored local to
  neuroscientists study the
              acquisition
  CNS, generating massive,
           • Analysis codes can be uploaded and
  intricate and highly
              executed on the nodes so that
  interrelated datasets
              derived datasets need not be
• Analysts require access to
              transported over low bandwidth
  these data to develop
              connections
  algorithms, models and
           • Data and analysis codes are
  schemata that characterise
              described by structured metadata,
  the underlying system
              providing an index for search,
• Resources and actors are
              annotation and audit over workflows
  rarely collocated and are
              leading to scientific outcomes
  therefore difficult to combine.
           • Users access the distributed
              resources through a web portal
              emulating a PC desktop
                                                 http://www.carmen.org.uk/
Even more scale?
The Large Hadron Collider




                                  Searching for the Higgs Boson




  • Predicted annual generation of around 15
    petabytes (15 million gigabytes) of data
  • Would need >1,700,000 dual layer DVDs
The GridPP solution to big data
                             Crowd sourcing for the LHC
                             Home and“Withcomputer users
                                         office GridPP you
                             can sign up to thenever have
                                        need LHC at home
                             project (based at Queen Mary,
                                        those data
                             University of London), which
                                        processing blues
                             makes use of idle CPU time. So
                             far, 40,000again…”
                                         users in more than 100
                             countries have contributed the
                             equivalent of 3000 years on a
                                        http://www.gridpp.ac.uk/about
                             single computer to the project.
With the Large Hadron Collider running at CERN the grid is
being used to process the accompanying data deluge. The UK
grid is contributing more than the equivalent of 20,000 PCs to
this worldwide effort.
Large scale, same problems (data
preservation in High Energy Physics)
Data from high–energy physics (HEP)
experiments are collected with significant
financial and human effort and are in many
cases unique. At the same time, HEP has no
coherent strategy for data preservation and re–
use, and many important and complex data sets
are simply lost.
David M. South, on behalf of the ICFA DPHEP Study Group
arXiv:1101.3186v1 [hep-ex]
Size and complexity in genomics




    These studies are generating
    valuable datasets which, due to
    their size and complexity, need to
    be skilfully managed…
“For science to effectively function,
and for society to reap the full
benefits from scientific endeavours,
                                    http://www.ukoln.ac.uk/ukoln/staff/e.j.lyon/publications.htm
it is crucial that science data be l#november-2009
made open”
Open to all? Case studies of openness
in research
Choices are made according to context, with
degrees of openness reached according to:
• The kinds of data to be made available
• The stage in the research process
• The groups to whom data will be made
  available
• On what terms and conditions it will be
  provided

Default position of most:
• YES to protocols, software, analysis tools,
  methods and techniques
• NO to making research data content freely
  available to everyone

After all, where is the incentive?              Angus Whyte, RIN/NESTA, 2010
Management - incentivisation,
recognition and reward
Policy

•   Public good
•   Preservation
•   Discovery
•   Confidentiality
•   First use
•   Recognition
•   Public funding
EPSRC expects all those institutions it funds
• to have developed a roadmap aligning their policies
   and processes with EPSRC’s nine expectations by
   1st May 2012
• to be fully compliant with each of those expectations
   by 1st May 2015
• to recognise that compliance will be monitored and
        EPSRC’s nine expectations and
   non-compliance investigated and that
        a roadmap - implications for HEIs
• failure to share research data could result in the
   imposition of sanctions
 http://www.epsrc.ac.uk/about/standards/researchdata/Pages/expectations.aspx
Management – infrastructure and
 data storage challenges...
Scaleable
Cost-effective (rent on-demand)
Secure (privacy and IPR)
Robust and resilient
Low entry barrier / ease-of-use
Has data-handling / transfer /
analysis capability
Cloud services?
The case for cloud computing in genome
informatics. Lincoln D Stein, May 2010
Management -
costs, benefits
and value
Perspectives translated to action
                                          Socio-                    2.
                                        technical                   • Inventory data assets
                                       management
                                                                    • Profile norms, roles,
• Identify drivers and                 perspectives
                                                                       values
  champions
                                                                    • Identify capability gaps
• Analyse stakeholders,
                                                                    • Analyse current
  issues
                            Information                                workflows
• Identify capability         systems
  gaps                      perspectives
• Assess costs,
  benefits, risks
                                                                    3.
                                       Research
                                        practice                    • Produce feasible,
                                      perspectives                    desirable changes
                                                                    • Evaluate fitness for
                                                                      purpose

                   Adapted from Developing Research Data Management Capabilities by Whyte et al, DCC, 2012
Reaching the community
Not just roadshows but also Institutional Engagements

With funding from HEFCE we’re
• Working intensively with 18 HEIs to increase RDM capability
   – 60 days of free effort per HEI drawn from a mix of DCC staff
   – Deploy DCC & external tools, approaches & best practice

• Support varies based on what each institution wants/needs

• Lessons & examples to be shared with the community


          www.dcc.ac.uk/community/institutional-engagements
Why do we do this?
1. Reports that researchers are often unaware
   of risks and opportunities
http://www.flickr.com/photos/mattimattila/3003324844/




       “Departments don’t have guidelines or
   norms for personal back-up and researcher
   procedure, knowledge and diligence varies
       tremendously. Many have experienced
          moderate to catastrophic data loss”
Incremental Project Report, June 2010
Open to all? Case studies of openness
in research

A clarion call to the support
services:
“…sustaining and making use of the new
kinds of infrastructure required for
openness demands new skills and
significant effort from researchers and
others, particularly at a point when
standards, guidelines, conventions and
services for managing and curating new
kinds of material are as yet under-
developed and not always easy to use”


                                          Angus Whyte, RIN/NESTA, 2010
Why do we do this?
1. Reports that researchers are often unaware
   of risks and opportunities
2. There is a lack of clarity in terms of skills
   availability and acquisition
…researchers are
reluctant to adopt new tools and
services unless they know
someone who can recommend
or share knowledge about
them. Support needs to be
based on a close understanding
of the researchers’ work, its
patterns and timetables.
Why do we do this?
1. Reports that researchers are often unaware
   of risks and opportunities
2. There is a lack of clarity in terms of skills
   availability and acquisition
3. Many institutions are unprepared to meet
   the increasingly prescriptive demands of
   funders
DCC
                     policy
                     summary




http://www.dcc.ac.uk/resources/policy-and-legal
Institutional
Policy
Why do we do this?
1. Reports that researchers are often unaware
   of risks and opportunities
2. There is a lack of clarity in terms of skills
   availability and acquisition
3. Many institutions are unprepared to meet
   the increasingly prescriptive demands of
   funders
4. …and legislators
Rules and regulations…


    Compliance

 Data Protection Act
        1998
                       • Rights, Exemptions, Enforcement

Freedom of             • Climategate, Tree Rings, Tobacco
Information Act 2000     and…(what’s next?)

Computer Misuse Act
      1980
                    • etc. etc. etc………..
Avoiding threats and exposures…




              JISC Legal
Why do we do this?
1. Reports that researchers are often unaware
   of risks and opportunities
2. There is a lack of clarity in terms of skills
   availability and acquisition
3. Many institutions are unprepared to meet
   the increasingly prescriptive demands of
   funders
4. …and legislators
5. The advantages from planning, openness
   and sharing are not understood
From Institutional
Engagements to
research data
management
services




http://www.dcc.ac.uk/community/institutional-engagements
                      Adapted from Developing Research Data Management Capabilities by Whyte et al, DCC, 2012
Some current IE activities
         Assessing                  Piloting tools
             needs                  e.g. DataFlow


                     RDM roadmaps




   Policy                                     Policy
development                               implementation
• Data curation is but a minor element of the
  research lifecycle
• Compliance with data management plans
  is rarely policed
• The traditional librarian role has been
  largely replaced by direct access to online
  resources
• Many researchers have removed
  themselves from the mainstream library
  user population
• It is said that substantial discipline
  knowledge is required of data curators
• Where discipline knowledge is supplied,
  the retention of curation skills does not
  necessarily follow
Help desk:
0131 651 1239

info@dcc.ac.uk

www.dcc.ac.uk

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Why manage research data?

  • 1. Because good research needs good data Why manage research data? The research data phenomenon and the role of the Digital Curation Centre Funded by This work is licensed under a Creative Commons Attribution 2.5 UK: Scotland License
  • 2. The Digital Curation Centre is • a consortium comprising units from the Universities of Bath (UKOLN), Edinburgh (DCC Centre) and Glasgow (HATII) • launched 1st March 2004 as a national centre for solving challenges in digital curation that could not be tackled by any single institution or discipline • funded by JISC • with additional HEFCE funding from 2011 for • the provision of support to national cloud services • targeted institutional development
  • 3. The DCC Mission Helping to build capacity, capability and skills in data management and curation across the UK’s higher education research community – DCC Phase 3 Business Plan
  • 4. DCC institutional stakeholders University managers Researchers • University libraries Research support • IT services staff with a role to play • The research and in data management, innovation office particularly those from • Digital repositories
  • 5. Why manage research data? The impact of e-Science and the global network • “Research data is a form of infrastructure, the basis for data intensive research across many domains” – EC Riding the Wave report, 2010 • “Funders expect research to be international in scope. A third of all articles published are internationally collaborative” – Royal Society, 2011 The governmental and funder imperative • “Publicly-funded research data must be made available for secondary scientific research” – ESRC research data policy
  • 6. Why manage research data? The researcher incentive • “By making their data available via licensed platforms researchers stand to improve their status as researchers through the mandatory citing and attribution of their original work” – Mark Hahnel, FigShare, IDCC 2011
  • 7. Why manage research data? The researcher incentive • “By making their data available via licensed platforms researchers stand to improve their status as researchers through the mandatory citing and attribution of their original work” – Mark Hahnel, FigShare, IDCC 2011 The same demanding, sometimes competing community of perspectives that the Digital Curation Centre was created to unravel…
  • 8. Where is the data in research? The six datacentric phases of the research lifecycle
  • 9. Reflections: the research data lifecycle
  • 10. Three perspectives Scale and complexity – Volume and pace – Infrastructure – Open science Policy – Funders – Institutions – Ethics & IP Management – Storage – Incentives – Costs & Sustainability http://www.nonsolotigullio.com/effettiottici/images/escher.jpg/
  • 11. Challenges of scale and complexity • The virtual laboratory is a federation of server nodes that allows • Globally, >100,000 distributed data to be stored local to neuroscientists study the acquisition CNS, generating massive, • Analysis codes can be uploaded and intricate and highly executed on the nodes so that interrelated datasets derived datasets need not be • Analysts require access to transported over low bandwidth these data to develop connections algorithms, models and • Data and analysis codes are schemata that characterise described by structured metadata, the underlying system providing an index for search, • Resources and actors are annotation and audit over workflows rarely collocated and are leading to scientific outcomes therefore difficult to combine. • Users access the distributed resources through a web portal emulating a PC desktop http://www.carmen.org.uk/
  • 12. Even more scale? The Large Hadron Collider Searching for the Higgs Boson • Predicted annual generation of around 15 petabytes (15 million gigabytes) of data • Would need >1,700,000 dual layer DVDs
  • 13. The GridPP solution to big data Crowd sourcing for the LHC Home and“Withcomputer users office GridPP you can sign up to thenever have need LHC at home project (based at Queen Mary, those data University of London), which processing blues makes use of idle CPU time. So far, 40,000again…” users in more than 100 countries have contributed the equivalent of 3000 years on a http://www.gridpp.ac.uk/about single computer to the project. With the Large Hadron Collider running at CERN the grid is being used to process the accompanying data deluge. The UK grid is contributing more than the equivalent of 20,000 PCs to this worldwide effort.
  • 14. Large scale, same problems (data preservation in High Energy Physics) Data from high–energy physics (HEP) experiments are collected with significant financial and human effort and are in many cases unique. At the same time, HEP has no coherent strategy for data preservation and re– use, and many important and complex data sets are simply lost. David M. South, on behalf of the ICFA DPHEP Study Group arXiv:1101.3186v1 [hep-ex]
  • 15. Size and complexity in genomics These studies are generating valuable datasets which, due to their size and complexity, need to be skilfully managed…
  • 16. “For science to effectively function, and for society to reap the full benefits from scientific endeavours, http://www.ukoln.ac.uk/ukoln/staff/e.j.lyon/publications.htm it is crucial that science data be l#november-2009 made open”
  • 17. Open to all? Case studies of openness in research Choices are made according to context, with degrees of openness reached according to: • The kinds of data to be made available • The stage in the research process • The groups to whom data will be made available • On what terms and conditions it will be provided Default position of most: • YES to protocols, software, analysis tools, methods and techniques • NO to making research data content freely available to everyone After all, where is the incentive? Angus Whyte, RIN/NESTA, 2010
  • 19. Policy • Public good • Preservation • Discovery • Confidentiality • First use • Recognition • Public funding
  • 20. EPSRC expects all those institutions it funds • to have developed a roadmap aligning their policies and processes with EPSRC’s nine expectations by 1st May 2012 • to be fully compliant with each of those expectations by 1st May 2015 • to recognise that compliance will be monitored and EPSRC’s nine expectations and non-compliance investigated and that a roadmap - implications for HEIs • failure to share research data could result in the imposition of sanctions http://www.epsrc.ac.uk/about/standards/researchdata/Pages/expectations.aspx
  • 21. Management – infrastructure and data storage challenges... Scaleable Cost-effective (rent on-demand) Secure (privacy and IPR) Robust and resilient Low entry barrier / ease-of-use Has data-handling / transfer / analysis capability Cloud services? The case for cloud computing in genome informatics. Lincoln D Stein, May 2010
  • 23. Perspectives translated to action Socio- 2. technical • Inventory data assets management • Profile norms, roles, • Identify drivers and perspectives values champions • Identify capability gaps • Analyse stakeholders, • Analyse current issues Information workflows • Identify capability systems gaps perspectives • Assess costs, benefits, risks 3. Research practice • Produce feasible, perspectives desirable changes • Evaluate fitness for purpose Adapted from Developing Research Data Management Capabilities by Whyte et al, DCC, 2012
  • 24. Reaching the community Not just roadshows but also Institutional Engagements With funding from HEFCE we’re • Working intensively with 18 HEIs to increase RDM capability – 60 days of free effort per HEI drawn from a mix of DCC staff – Deploy DCC & external tools, approaches & best practice • Support varies based on what each institution wants/needs • Lessons & examples to be shared with the community www.dcc.ac.uk/community/institutional-engagements
  • 25. Why do we do this? 1. Reports that researchers are often unaware of risks and opportunities
  • 26. http://www.flickr.com/photos/mattimattila/3003324844/ “Departments don’t have guidelines or norms for personal back-up and researcher procedure, knowledge and diligence varies tremendously. Many have experienced moderate to catastrophic data loss” Incremental Project Report, June 2010
  • 27. Open to all? Case studies of openness in research A clarion call to the support services: “…sustaining and making use of the new kinds of infrastructure required for openness demands new skills and significant effort from researchers and others, particularly at a point when standards, guidelines, conventions and services for managing and curating new kinds of material are as yet under- developed and not always easy to use” Angus Whyte, RIN/NESTA, 2010
  • 28. Why do we do this? 1. Reports that researchers are often unaware of risks and opportunities 2. There is a lack of clarity in terms of skills availability and acquisition
  • 29. …researchers are reluctant to adopt new tools and services unless they know someone who can recommend or share knowledge about them. Support needs to be based on a close understanding of the researchers’ work, its patterns and timetables.
  • 30. Why do we do this? 1. Reports that researchers are often unaware of risks and opportunities 2. There is a lack of clarity in terms of skills availability and acquisition 3. Many institutions are unprepared to meet the increasingly prescriptive demands of funders
  • 31.
  • 32. DCC policy summary http://www.dcc.ac.uk/resources/policy-and-legal
  • 34. Why do we do this? 1. Reports that researchers are often unaware of risks and opportunities 2. There is a lack of clarity in terms of skills availability and acquisition 3. Many institutions are unprepared to meet the increasingly prescriptive demands of funders 4. …and legislators
  • 35. Rules and regulations… Compliance Data Protection Act 1998 • Rights, Exemptions, Enforcement Freedom of • Climategate, Tree Rings, Tobacco Information Act 2000 and…(what’s next?) Computer Misuse Act 1980 • etc. etc. etc………..
  • 36. Avoiding threats and exposures… JISC Legal
  • 37. Why do we do this? 1. Reports that researchers are often unaware of risks and opportunities 2. There is a lack of clarity in terms of skills availability and acquisition 3. Many institutions are unprepared to meet the increasingly prescriptive demands of funders 4. …and legislators 5. The advantages from planning, openness and sharing are not understood
  • 38.
  • 39. From Institutional Engagements to research data management services http://www.dcc.ac.uk/community/institutional-engagements Adapted from Developing Research Data Management Capabilities by Whyte et al, DCC, 2012
  • 40. Some current IE activities Assessing Piloting tools needs e.g. DataFlow RDM roadmaps Policy Policy development implementation
  • 41. • Data curation is but a minor element of the research lifecycle • Compliance with data management plans is rarely policed • The traditional librarian role has been largely replaced by direct access to online resources • Many researchers have removed themselves from the mainstream library user population • It is said that substantial discipline knowledge is required of data curators • Where discipline knowledge is supplied, the retention of curation skills does not necessarily follow
  • 42. Help desk: 0131 651 1239 info@dcc.ac.uk www.dcc.ac.uk

Hinweis der Redaktion

  1. Whole range of support and services we can offer. There are typically a few things we do with each HEI. The focus depends on what they need.