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Eco-phenotypic physiologies:
a new kind of modeling
for unifying evolution, ecology and
cultural transmission
F. Panebianco and E. Serrelli
Lisbon, 28 May 2013
Motivation
We propose a mathematical framework of formal
relations general enough to be applicable in
biology (ecology and evolutionary biology)
cultural transmission (economics)
We are interested in modeling some biological concepts
we will call “eco-phenotypic concepts”
Development, plasticity, reaction norm, phenotypic
heritability, epigenetics, and niche construction.
Physiology
Consider a population composed at each time of Nt
agents and a set of resources Rt
A Physiology is an algorithm that defines the resource
management behavior of the agent.
the resources needed by the agent for the basic
survival ˜Mi
the efficiency is the resource extraction αi
the efficiency of their use βi
the agent’s resource intake target Gi
t
¯Pi
t = ( ˜Mi
t, αi
, βi
, Gi
t) (1)
Environment
All the elements of the world and of the population that
are not part of the agent.
the resources Rt that are available to the population.
The number of agents Nt
the vector of all the other agents’ physiologies ¯P−i
t
¯Ei
t = (Rt, Nt, ¯P−i
t ) (2)
Resource extraction
∑
i
Ri
t ≤ Rt
own resource intake target Gi
t,
others’ resource intake targets G−i
t
the vector of all extraction efficiencies ¯α
¯Ri
t = (Rt, Gi
t, G−i
t , ¯α) (3)
Notice that if Ri
t < ˜Mi
t then the agent dies.
Matching Function and Reproduction
each male with physiology i, that extracted Ri
t is matched
with a female of physiology j that extracted R
j
t
γ
ij
t the share of Ri
t that an agent of physiology i in a ij
matching devotes to own subsistence and (1 − γ
ij
t ) the
share devoted for offspring production.
N
ij
t+1(Ri
t, R
j
t, γ
ij
t , γ
ji
t ) (4)
Niche construction and Resource
Regeneration
Rt+1 = (Rt − ∑
i
Ri
t)(1 + λ)
if individuals resource extraction and physiologies are
niche constructing then λt( ¯Rt) so that
Rt+1 = (Rt − ∑
i
Ri
t)(1 + λt( ¯Rt)) (5)
Reaction Norms and the New Generation’s
Physiology (I)
Reaction norm: dictates how to use or not use information
from the environment and from parental physiologies as
cues to form a new physiology.
The reaction norm Xi
t+1 accepts as inputs
the resources the new generation faces Rt+1
the parental physiologies Pi
t and P
j
t
the physiologies agents in new generation meet
during their formation process ¯Pt
Pi
t+1 = Xi
t+1(Rt, Pi
t, P
j
t, ¯Pt) (6)
Reaction Norms and the New Generation’s
Physiology (II)
Pi
t+1 = Xi
t+1(Rt, Pi
t, P
j
t, ¯Pt)
with probability p
ij
t the new individual born from
matching ij takes i’s reaction norm Xi
t+1 = Xi
t
with probability 1 − p
ij
t the new individual born from
matching ij takes j’s reaction norm Xi
t+1 = X
j
t.
Summing up the framework
Physiology: ¯Pi
t = ( ˜Mi
t, αi, βi, Gi
t)
Environment: ¯Ei
t = (Rt, Nt, ¯P−i
t )
Resource Extraction: ¯Ri
t = (Rt, Gi
t, G−i
t , ¯α)
Matching and Reproduction: N
ij
t+1(Ri
t, R
j
t, γ
ij
t , γ
ji
t )
Niche construction and resource generation:
Rt+1 = (Rt − ∑i Ri
t)(1 + λt( ¯Rt))
Reaction Norms and new physiology:
Pi
t+1 = Xi
t+1(Rt, Pi
t, P
j
t, ¯Pt)
Next Steps
Fixing one reaction norm, studying how the shape of
the different elements impact the dynamics of the
population
Compare the patterns of different reaction norms
(adaptive and forward looking reaction norms)
Make reaction norms compete (plasticity in most
successful population, necessary feature for a
reaction norm to survive, ...)

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Lisbon

  • 1. Eco-phenotypic physiologies: a new kind of modeling for unifying evolution, ecology and cultural transmission F. Panebianco and E. Serrelli Lisbon, 28 May 2013
  • 2. Motivation We propose a mathematical framework of formal relations general enough to be applicable in biology (ecology and evolutionary biology) cultural transmission (economics) We are interested in modeling some biological concepts we will call “eco-phenotypic concepts” Development, plasticity, reaction norm, phenotypic heritability, epigenetics, and niche construction.
  • 3. Physiology Consider a population composed at each time of Nt agents and a set of resources Rt A Physiology is an algorithm that defines the resource management behavior of the agent. the resources needed by the agent for the basic survival ˜Mi the efficiency is the resource extraction αi the efficiency of their use βi the agent’s resource intake target Gi t ¯Pi t = ( ˜Mi t, αi , βi , Gi t) (1)
  • 4. Environment All the elements of the world and of the population that are not part of the agent. the resources Rt that are available to the population. The number of agents Nt the vector of all the other agents’ physiologies ¯P−i t ¯Ei t = (Rt, Nt, ¯P−i t ) (2)
  • 5. Resource extraction ∑ i Ri t ≤ Rt own resource intake target Gi t, others’ resource intake targets G−i t the vector of all extraction efficiencies ¯α ¯Ri t = (Rt, Gi t, G−i t , ¯α) (3) Notice that if Ri t < ˜Mi t then the agent dies.
  • 6. Matching Function and Reproduction each male with physiology i, that extracted Ri t is matched with a female of physiology j that extracted R j t γ ij t the share of Ri t that an agent of physiology i in a ij matching devotes to own subsistence and (1 − γ ij t ) the share devoted for offspring production. N ij t+1(Ri t, R j t, γ ij t , γ ji t ) (4)
  • 7. Niche construction and Resource Regeneration Rt+1 = (Rt − ∑ i Ri t)(1 + λ) if individuals resource extraction and physiologies are niche constructing then λt( ¯Rt) so that Rt+1 = (Rt − ∑ i Ri t)(1 + λt( ¯Rt)) (5)
  • 8. Reaction Norms and the New Generation’s Physiology (I) Reaction norm: dictates how to use or not use information from the environment and from parental physiologies as cues to form a new physiology. The reaction norm Xi t+1 accepts as inputs the resources the new generation faces Rt+1 the parental physiologies Pi t and P j t the physiologies agents in new generation meet during their formation process ¯Pt Pi t+1 = Xi t+1(Rt, Pi t, P j t, ¯Pt) (6)
  • 9. Reaction Norms and the New Generation’s Physiology (II) Pi t+1 = Xi t+1(Rt, Pi t, P j t, ¯Pt) with probability p ij t the new individual born from matching ij takes i’s reaction norm Xi t+1 = Xi t with probability 1 − p ij t the new individual born from matching ij takes j’s reaction norm Xi t+1 = X j t.
  • 10. Summing up the framework Physiology: ¯Pi t = ( ˜Mi t, αi, βi, Gi t) Environment: ¯Ei t = (Rt, Nt, ¯P−i t ) Resource Extraction: ¯Ri t = (Rt, Gi t, G−i t , ¯α) Matching and Reproduction: N ij t+1(Ri t, R j t, γ ij t , γ ji t ) Niche construction and resource generation: Rt+1 = (Rt − ∑i Ri t)(1 + λt( ¯Rt)) Reaction Norms and new physiology: Pi t+1 = Xi t+1(Rt, Pi t, P j t, ¯Pt)
  • 11. Next Steps Fixing one reaction norm, studying how the shape of the different elements impact the dynamics of the population Compare the patterns of different reaction norms (adaptive and forward looking reaction norms) Make reaction norms compete (plasticity in most successful population, necessary feature for a reaction norm to survive, ...)