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Grupo de Bioinformática &
   Evolución Molecular

        darwin.uvigo.es
Composition
•  5 PhD
•  3 postdocs
•  1 IPP
•  1 TU

•  7 biologists, 1 mathematician, 1 informatic
   engineer, 1 chemist.
•  Spain, Portugal, Brazil, Venezuela, Peru,
   Romenia.
Members (I)
•  Graciela Sotelo (PhD; biologist): crustacean
   phylogeography.
•  Miguel Arenas (PhD; chemist): recombination
   and HIV evolution.
•  Mateus Patricio (PhD; computer science):
   genetic code prediction.
•  Sara Rocha (PhD; biologist): reptile
   biogeography.
•  Miguel Fonseca (PhD; biologist): mtDNA
   evolution.
Members (II)
•  Alpar Vajk-Kramer (postdoc; mathematician):
   numerical optimization.
•  Leo Arbiza (postdoc; biologist): computational
   genomics.
•  Leo Martins (postdoc; biologist): Bayesian
   phylogenomics.
•  Carlos Canchaya (IPP; biologist): comparative
   genomics.
•  David Posada (TU; biologist): models of
   molecular evolution, detection of recombination
Research lines in bioinformatics

• Computational prediction of the genetic
  code.
• Molecular evolution, genome structure and
  gene function.
• Phylogenomics and models of genome
  evolution.
• Bacterial and phage comparative genomics
• Software development.
Bioinformatic needs
•  HPC: parallelization, multi-core environments,
   GPU.
•  Development of web services.
•  Classification and machine learning.
•  Computational statistics: numerical
   optimization,likelihod, Bayesian, MCMC.
Software development

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Xb5

  • 1. Grupo de Bioinformática & Evolución Molecular darwin.uvigo.es
  • 2. Composition •  5 PhD •  3 postdocs •  1 IPP •  1 TU •  7 biologists, 1 mathematician, 1 informatic engineer, 1 chemist. •  Spain, Portugal, Brazil, Venezuela, Peru, Romenia.
  • 3. Members (I) •  Graciela Sotelo (PhD; biologist): crustacean phylogeography. •  Miguel Arenas (PhD; chemist): recombination and HIV evolution. •  Mateus Patricio (PhD; computer science): genetic code prediction. •  Sara Rocha (PhD; biologist): reptile biogeography. •  Miguel Fonseca (PhD; biologist): mtDNA evolution.
  • 4. Members (II) •  Alpar Vajk-Kramer (postdoc; mathematician): numerical optimization. •  Leo Arbiza (postdoc; biologist): computational genomics. •  Leo Martins (postdoc; biologist): Bayesian phylogenomics. •  Carlos Canchaya (IPP; biologist): comparative genomics. •  David Posada (TU; biologist): models of molecular evolution, detection of recombination
  • 5. Research lines in bioinformatics • Computational prediction of the genetic code. • Molecular evolution, genome structure and gene function. • Phylogenomics and models of genome evolution. • Bacterial and phage comparative genomics • Software development.
  • 6. Bioinformatic needs •  HPC: parallelization, multi-core environments, GPU. •  Development of web services. •  Classification and machine learning. •  Computational statistics: numerical optimization,likelihod, Bayesian, MCMC.