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Linked Data Standards and
Infrastructure for Scientific Publishing

Bradley P. Allen
Elsevier Labs
W3C Workshop on Linked Enterprise Data Patterns
6 December 2011
The role of linked data in STM publishing
                                              Smart Content Delivery
                                                    Better discovery through
                                                    semantic search & navigation
       Linked data from
                                                    •Faceted search & browse
       partners and the Web
                                                    •Ontology-driven navigation
                                                    •Task-specific results
                                                    •Personalized/localized results
                                                    •Question answering


                                                    Better understanding through
                     Text
                              Entities,             analysis and visualization
                                                    •Tag clouds
Scholarly                     concepts and
                                                    •Heatmaps
content                       relationships         •Streamgraphs
                    Tables                          •Scatterplots
                                                    •Time series
                                                    •Animations
                   Images
                                                    New knowledge through
                                                    aggregation and synthesis
                                                    •Topic pages
            Scholarly
                              •Social network maps
            knowledge                               •Geolocation maps
            organization                            •Data mashups
            systems                                 •Text mining reports


                                                                              2
Scientific publications as linked data

                             Linked data



                                      Entity record


               Document



     Acquire                                          Deliver
                                      Media object




                                Transform, 
                          Enhance, Index, Analyze,
                                 Compose


                                                                3
Elsevier’s approach


 • Embrace linked data principles while leveraging our
   existing content production workflow and
   infrastructure
    – Find the right balance between production/QA and online
      delivery
 • Leverage partners for content enhancement and
   knowledge organization
    – Reuse Web-standard vocabularies, taxonomies, ontologies
      and entity resources where possible
 • Build out linked data design patterns for application
   development
 • Deliver benefits across the complementary use cases
   of researcher and practitioner

                                                                4
Elsevier work to date

 • Standards
     – RDF named graphs
       conformant with use-specific
       XML schemas for
       production/QA
     – Taxonomies in SKOS
 • Infrastructure
     – Linked Data Repository with
       CRUD API, Atom feeds for
       online delivery services
     – Virtual Total Warehouse for
       content repository federation
 • Applications
     – Semantic search for medical
       researchers and
       practitioners
     – Lancet, SciVerse app
       mashups

                                        5
LEDP2011: what we want to discuss


 • Easing technology adoption by enterprise
   IT staff
 • Best practices for knowledge organization
   systems management
 • Infrastructure for scholarly linked data
   publishing



                                               6
Easing technology adoption


 • Tools and best practices for URL and
   namespace management and governance
 • Best practices for publishing and consuming
   linked data that address IT concerns rather
   than legacy RDF issues
   – 2006 vs. later versions of “Four Principles”
   – Serialization “impedance mismatch”
   – RDF APIs vs. SPARQL
   – HTTP Range-14
                                                     7
Best practices for knowledge organization


 • Tools and best practices for global/local
   knowledge organization systems
   management
 • Standards for named entities and
   registries crucial to accreditation,
   provenance and trust
   – e.g. author identifiers and profiles in ORCID



                                                     8
Infrastructure for scholarly linked data publishing


 • Validators for linked data
 • Standards supporting scholarly publishing
   workflows 
    – Named graphs
    – Versioning
    – Access & entitlement
 • Standards and best practices for annotation
   of scholarly content 
    – e.g. CITO, SWAN, SIOC, AO, OAC
 • Support for free text search

                                                 9

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Linked Data Standards and Infrastructure for Scientific Publishing (W3C LEDP 2011 Workshop)

  • 1. Linked Data Standards and Infrastructure for Scientific Publishing Bradley P. Allen Elsevier Labs W3C Workshop on Linked Enterprise Data Patterns 6 December 2011
  • 2. The role of linked data in STM publishing Smart Content Delivery Better discovery through semantic search & navigation Linked data from •Faceted search & browse partners and the Web •Ontology-driven navigation •Task-specific results •Personalized/localized results •Question answering Better understanding through Text Entities, analysis and visualization •Tag clouds Scholarly concepts and •Heatmaps content relationships •Streamgraphs Tables •Scatterplots •Time series •Animations Images New knowledge through aggregation and synthesis •Topic pages Scholarly •Social network maps knowledge •Geolocation maps organization •Data mashups systems •Text mining reports 2
  • 3. Scientific publications as linked data Linked data Entity record Document Acquire Deliver Media object Transform, Enhance, Index, Analyze, Compose 3
  • 4. Elsevier’s approach • Embrace linked data principles while leveraging our existing content production workflow and infrastructure – Find the right balance between production/QA and online delivery • Leverage partners for content enhancement and knowledge organization – Reuse Web-standard vocabularies, taxonomies, ontologies and entity resources where possible • Build out linked data design patterns for application development • Deliver benefits across the complementary use cases of researcher and practitioner 4
  • 5. Elsevier work to date • Standards – RDF named graphs conformant with use-specific XML schemas for production/QA – Taxonomies in SKOS • Infrastructure – Linked Data Repository with CRUD API, Atom feeds for online delivery services – Virtual Total Warehouse for content repository federation • Applications – Semantic search for medical researchers and practitioners – Lancet, SciVerse app mashups 5
  • 6. LEDP2011: what we want to discuss • Easing technology adoption by enterprise IT staff • Best practices for knowledge organization systems management • Infrastructure for scholarly linked data publishing 6
  • 7. Easing technology adoption • Tools and best practices for URL and namespace management and governance • Best practices for publishing and consuming linked data that address IT concerns rather than legacy RDF issues – 2006 vs. later versions of “Four Principles” – Serialization “impedance mismatch” – RDF APIs vs. SPARQL – HTTP Range-14 7
  • 8. Best practices for knowledge organization • Tools and best practices for global/local knowledge organization systems management • Standards for named entities and registries crucial to accreditation, provenance and trust – e.g. author identifiers and profiles in ORCID 8
  • 9. Infrastructure for scholarly linked data publishing • Validators for linked data • Standards supporting scholarly publishing workflows – Named graphs – Versioning – Access & entitlement • Standards and best practices for annotation of scholarly content – e.g. CITO, SWAN, SIOC, AO, OAC • Support for free text search 9