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NEIC TRYGGVE – NORDIC SERVICES FOR SENSITIVE
DATA
Antti Pursula, antti.pursula@csc.fi
https://wiki.neic.no/tryggve
USE OF HUMAN DATA
IN BIOMEDICAL RESEARCH HAS GREAT POTENTIAL
PERSONALIZED MEDICINE
CURE OF DISEASES
IMPROVED LIFE QUALITY
Data is collected by:
 Biobanks
 Research institutes
 Large genome studies
 Register organizations,
 Hospitals,
 Personal health apps, etc.
Society benefits when
these data collections
are made available
for research!
PROTECT PRIVACY OF THE INDIVIDUAL
Research use of health data requires:
 Data protection
 Secure data transfer
 Secure analysis environments
 Ethical considerations
 Effective legislation
CHALLENGE IS TO PREVENT NON-AUTHORIZED USE OF DATA
WHILE UTILIZING THE DATA FOR THE BENEFIT OF SOCIETY AND INDIVIDUALS
Health and well-being data on
humans is sensitive, personal
data that needs to be protected,
even after de-identification
NEED FOR SECURE IT SERVICES
THAT CAN IMPLEMENT THE NECESSARY
PRECONDITIONS
ELIXIR Nodes in Finland,
Denmark, Norway and Sweden
have teamed up to develop and
scale up services for sensitive
research data, within the
NORDIC TRYGGVE PROJECT
TRYGGVE PROJECT
COLLABORATION FOR SENSITIVE BIOMEDICAL DATA
 Project aims to strengthen biomedical
research by facilitating use of sensitive
data in cross-border projects
 Partners and funders are NeIC and ELIXIR
Nodes in Denmark, Finland, Norway and
Sweden
 3-year project with volume of ca. 100 PMs
/year (ends in Oct 2017)
 Project will build on strong existing
capacities and resources in Nordic
countries
PRAGMATIC APPROACH
Implement solutions that support
various use cases and varying local
terms and conditions
MOBILITY
Enhancing cross-border mobility of:
data, users and analysis pipelines
ACCESSIBLE
Services for sensitive data should be
accessible to users across Nordics
regardless of their location
TRYGGVE TARGETS
IN A NUTSHELL
SECURE COMPUTING
AND DATA ENVIRONMENTS
Tryggve service development relies on
secure computing and data environments
at ELIXIR Nodes at the participating
countries
TSD 2.0 service at USIT
Mosler service at NBIS
ePouta secure cloud at CSC
Computerome at DTU
SECURE CLOUD
Infrastructure for data and computing
(ePouta, Computerome)
SECURE REMOTE DESKTOP
backed up with computing resources
(TSD, Mosler, Computerome)
8
SECURE SYSTEMS IN TRYGGVE
Secure systems available through Nordic Tryggve project:
• TSD 2.0 service at USIT, Norway
– PaaS, accessible through remote desktop
• Mosler service at BILS, Sweden
– PaaS, accessible through remote desktop
• ePouta IaaS at CSC, Finland
– IaaS, secure cloud infrastructure connected securely to customer’s
system
• Computerome at DTU, Denmark
– Iaas / PaaS, both access through remote desktop and connected to
customer’s system
• All provide secured area for research projects, isolated both from
external networks and from other users of the systems
SECURE SYSTEMS
THE USER STAYS IN CONTROL
TAKING INTO USE EXTERNAL SECURE SERVICE DOES NOT IMPLY
TRANSFERRING THE CONTROL OVER THE DATA TO THE PROVIDER!
Where the data is analyzed or stored and who
has the control over the data are different things
Service providers offer secure environment
for storing and analyzing their data
Data handler contracts define the roles
Ability to combine data from several sources and
countries
MOBILITY OF DATA
MOBILITY OF USERS
Ability to use the service best suited for the research
project, regardless if it is in the same country
Ability to deploy the preferred analysis pipeline
on the system being used
Access the same system and
data that collaborators in
another country use
MOBILITY OF ANALYSIS PIPELINES
Pool data from several
countries to achieve larger
sample sizes
Data in several locations but
can not be pooled; run
standardized analyses on all
partial data sets
POSSIBLE USE CASES:
MOBILITY ACROSS BORDERS
11
• Mosler remote desktop connected to CSC ePouta
secure cloud infrastructure:
– No degradation of performance when moving data
between countries
DEMONSTRATION OF THE USE OF SECURE
CLOUD ACROSS BORDERS
GETTING STARTED
USING THE TRYGGVE SERVICES
 Aimed for Nordic
research teams
 Backed by ELIXIR Nodes
and NeIC
CURRENTLY ACTIVE USE CASES
Use of the systems not limited
To Nordic countries!
CALL FOR NEW USE CASES
CONTACT INFORMATION TO SERVICES ON THE TRYGGVE WEB
SITE
 Trans-Nordic Gene-
Environment Analyses in
Schizophrenia
 Scandinavian Genetics
Collaboration for Olink
Biomarkers
CASE EXAMPLE ON TRYGGVE SUPPORT
FOR A USE CASE
PROCESSING SENSITIVE DATA FOR
SCHIZOPHRENIA RESEARCH
More info and interview of Prof. Sullivan at
http://www.inthefieldstories.net/processing-
sensitive-data-for-schizophrenia-research/
 Research on the gene-environmental
interaction and causes for
schizophrenia, led by professor
Patrick Sullivan, KI.
 Large amount of samples are
available in the Nordic countries.
 Secure place to conduct harmonized
analyses is crucial.
 Professor Sullivan, with the assistance
of Tryggve security experts, is now
combining data sets from Denmark,
Norway, Sweden and Estonia to
create a joint data set with a total of
6000 cases and 8750 controls.
FUTURE VISIONS
FOR A COLLABORATIVE EFFORT
Create Data Platforms that are
internationally interoperable
 Support data submission, archiving
and sharing processes
 Integrate with secure cloud services for
data processing
 Enable sharing of data to third parties
who have the appropriate access
permissions
Creating such data platforms is a collaborative effort between (at least) the
research community, IT infrastructure providers and data collecting
organizations
a
INFORMATION COMMONS
AND THE DEVELOPMENTS IN TRYGGVE / CSC
Information commons slide by Joakim Dillner, NIASC
CSC REMS access management
“Local EGA” Secure repository
Secure Gateway module
CSC ePouta secure cloud
infrastructure
AUTHORIZATION MANAGEMENT WITH REMS
• REMS provides complete process for managing entitlements
• Demo available at https://remsdemo.csc.fi/
Principal
investigator
Applicant
Research group
Members of the
application
Metadata on
dataset 1&2
Dataset 1
Dataset 2
DAC 1
Approver
DAC 2
Approver
REMS
Workflow
Reports
Entitlements
IdP
IdP
IdP
SP
1. Apply
for access
4. Approve
5. Access
3. Circulate
to approver
2. Commit to
licence terms
SUMMARY
TRYGGVE PROVIDES SECURE SERVICES ACROSS BORDERS
A Secure private cloud is an
infrastructure operated solely to provide an
on demand specific use case service
transparent to the end user
 Nordic ELIXIR Nodes collaborate to
create a region where all the secure
services are accessible to users
regardless of their location
 Pragmatic: mobility of data, mobility of
users, mobility of pipelines
 Based on secure data and computing
environments in each participating
country
 Cross-border use cases are in
operation
CONTACT INFO
18
Project Manager:
Antti Pursula
antti.pursula@csc.fi
Website:https://wiki.neic.no
/Tryggve
Local contact points:
Denmark: Ali Syed (DTU)
alisyed@cbs.dtu.dk
Finland: Antti Pursula (CSC)
antti.pursula@csc.fi
Norway: Francesca Iozzi (UiO)
m.f.iozzi@usit.uio.no
Sweden: Niclas Jareborg (NBIS)
niclas.jareborg@bils.se

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161129 tryggve-at niasc-biobanks

  • 1. NEIC TRYGGVE – NORDIC SERVICES FOR SENSITIVE DATA Antti Pursula, antti.pursula@csc.fi https://wiki.neic.no/tryggve
  • 2. USE OF HUMAN DATA IN BIOMEDICAL RESEARCH HAS GREAT POTENTIAL PERSONALIZED MEDICINE CURE OF DISEASES IMPROVED LIFE QUALITY Data is collected by:  Biobanks  Research institutes  Large genome studies  Register organizations,  Hospitals,  Personal health apps, etc. Society benefits when these data collections are made available for research!
  • 3. PROTECT PRIVACY OF THE INDIVIDUAL Research use of health data requires:  Data protection  Secure data transfer  Secure analysis environments  Ethical considerations  Effective legislation CHALLENGE IS TO PREVENT NON-AUTHORIZED USE OF DATA WHILE UTILIZING THE DATA FOR THE BENEFIT OF SOCIETY AND INDIVIDUALS Health and well-being data on humans is sensitive, personal data that needs to be protected, even after de-identification
  • 4. NEED FOR SECURE IT SERVICES THAT CAN IMPLEMENT THE NECESSARY PRECONDITIONS ELIXIR Nodes in Finland, Denmark, Norway and Sweden have teamed up to develop and scale up services for sensitive research data, within the NORDIC TRYGGVE PROJECT
  • 5. TRYGGVE PROJECT COLLABORATION FOR SENSITIVE BIOMEDICAL DATA  Project aims to strengthen biomedical research by facilitating use of sensitive data in cross-border projects  Partners and funders are NeIC and ELIXIR Nodes in Denmark, Finland, Norway and Sweden  3-year project with volume of ca. 100 PMs /year (ends in Oct 2017)  Project will build on strong existing capacities and resources in Nordic countries
  • 6. PRAGMATIC APPROACH Implement solutions that support various use cases and varying local terms and conditions MOBILITY Enhancing cross-border mobility of: data, users and analysis pipelines ACCESSIBLE Services for sensitive data should be accessible to users across Nordics regardless of their location TRYGGVE TARGETS IN A NUTSHELL
  • 7. SECURE COMPUTING AND DATA ENVIRONMENTS Tryggve service development relies on secure computing and data environments at ELIXIR Nodes at the participating countries TSD 2.0 service at USIT Mosler service at NBIS ePouta secure cloud at CSC Computerome at DTU SECURE CLOUD Infrastructure for data and computing (ePouta, Computerome) SECURE REMOTE DESKTOP backed up with computing resources (TSD, Mosler, Computerome)
  • 8. 8 SECURE SYSTEMS IN TRYGGVE Secure systems available through Nordic Tryggve project: • TSD 2.0 service at USIT, Norway – PaaS, accessible through remote desktop • Mosler service at BILS, Sweden – PaaS, accessible through remote desktop • ePouta IaaS at CSC, Finland – IaaS, secure cloud infrastructure connected securely to customer’s system • Computerome at DTU, Denmark – Iaas / PaaS, both access through remote desktop and connected to customer’s system • All provide secured area for research projects, isolated both from external networks and from other users of the systems
  • 9. SECURE SYSTEMS THE USER STAYS IN CONTROL TAKING INTO USE EXTERNAL SECURE SERVICE DOES NOT IMPLY TRANSFERRING THE CONTROL OVER THE DATA TO THE PROVIDER! Where the data is analyzed or stored and who has the control over the data are different things Service providers offer secure environment for storing and analyzing their data Data handler contracts define the roles
  • 10. Ability to combine data from several sources and countries MOBILITY OF DATA MOBILITY OF USERS Ability to use the service best suited for the research project, regardless if it is in the same country Ability to deploy the preferred analysis pipeline on the system being used Access the same system and data that collaborators in another country use MOBILITY OF ANALYSIS PIPELINES Pool data from several countries to achieve larger sample sizes Data in several locations but can not be pooled; run standardized analyses on all partial data sets POSSIBLE USE CASES: MOBILITY ACROSS BORDERS
  • 11. 11 • Mosler remote desktop connected to CSC ePouta secure cloud infrastructure: – No degradation of performance when moving data between countries DEMONSTRATION OF THE USE OF SECURE CLOUD ACROSS BORDERS
  • 12. GETTING STARTED USING THE TRYGGVE SERVICES  Aimed for Nordic research teams  Backed by ELIXIR Nodes and NeIC CURRENTLY ACTIVE USE CASES Use of the systems not limited To Nordic countries! CALL FOR NEW USE CASES CONTACT INFORMATION TO SERVICES ON THE TRYGGVE WEB SITE  Trans-Nordic Gene- Environment Analyses in Schizophrenia  Scandinavian Genetics Collaboration for Olink Biomarkers
  • 13. CASE EXAMPLE ON TRYGGVE SUPPORT FOR A USE CASE PROCESSING SENSITIVE DATA FOR SCHIZOPHRENIA RESEARCH More info and interview of Prof. Sullivan at http://www.inthefieldstories.net/processing- sensitive-data-for-schizophrenia-research/  Research on the gene-environmental interaction and causes for schizophrenia, led by professor Patrick Sullivan, KI.  Large amount of samples are available in the Nordic countries.  Secure place to conduct harmonized analyses is crucial.  Professor Sullivan, with the assistance of Tryggve security experts, is now combining data sets from Denmark, Norway, Sweden and Estonia to create a joint data set with a total of 6000 cases and 8750 controls.
  • 14. FUTURE VISIONS FOR A COLLABORATIVE EFFORT Create Data Platforms that are internationally interoperable  Support data submission, archiving and sharing processes  Integrate with secure cloud services for data processing  Enable sharing of data to third parties who have the appropriate access permissions Creating such data platforms is a collaborative effort between (at least) the research community, IT infrastructure providers and data collecting organizations
  • 15. a INFORMATION COMMONS AND THE DEVELOPMENTS IN TRYGGVE / CSC Information commons slide by Joakim Dillner, NIASC CSC REMS access management “Local EGA” Secure repository Secure Gateway module CSC ePouta secure cloud infrastructure
  • 16. AUTHORIZATION MANAGEMENT WITH REMS • REMS provides complete process for managing entitlements • Demo available at https://remsdemo.csc.fi/ Principal investigator Applicant Research group Members of the application Metadata on dataset 1&2 Dataset 1 Dataset 2 DAC 1 Approver DAC 2 Approver REMS Workflow Reports Entitlements IdP IdP IdP SP 1. Apply for access 4. Approve 5. Access 3. Circulate to approver 2. Commit to licence terms
  • 17. SUMMARY TRYGGVE PROVIDES SECURE SERVICES ACROSS BORDERS A Secure private cloud is an infrastructure operated solely to provide an on demand specific use case service transparent to the end user  Nordic ELIXIR Nodes collaborate to create a region where all the secure services are accessible to users regardless of their location  Pragmatic: mobility of data, mobility of users, mobility of pipelines  Based on secure data and computing environments in each participating country  Cross-border use cases are in operation
  • 18. CONTACT INFO 18 Project Manager: Antti Pursula antti.pursula@csc.fi Website:https://wiki.neic.no /Tryggve Local contact points: Denmark: Ali Syed (DTU) alisyed@cbs.dtu.dk Finland: Antti Pursula (CSC) antti.pursula@csc.fi Norway: Francesca Iozzi (UiO) m.f.iozzi@usit.uio.no Sweden: Niclas Jareborg (NBIS) niclas.jareborg@bils.se