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201119946 MOSELANE
T.T
THE SCIENCE OF MICROBES
What is Microbiology?
Microbes, or microorganisms are minute living
things that are usually unable to be viewed with the
naked eye.
What are some examples of microbes?
Bacteria, fungi, protozoa, algae, viruses are
examples!
Some are pathogenic
Many are beneficial
Dr.T.V.Rao MD 3
………………continues
 Study of different
Microorganisms
 Can be
Bacteria
Viruses
Parasites
Fungus
4
HISTORY OF MICROBIOLOGY
5
Dutchman anton van leeuwenhoek observed
microorganisms>>”animalcules” suspended in a drop of
pond water in front of a ground hand lens
6
History; contd.
 ROBERT HOOKE built simple compound microscope and observed
structure of thin layer of cork>>used the word “CELLS”
 Theory of spontaneous generation: from non-living matter
 Theory of biogenesis: from preexisting living cells
 LOUIS PASTEUR>>Pasteur’ experiment>>boiled nutrient broth in a
flask & curved it in to S-shape>>after cooling>>bacteria trapped in
curve but no organism in flask; dicovered souring in alcohol is due
to fermentation and can be prevented by heating wine at56oC for
30mins…..now called PASTEURISATION>>
7
History contd;
 IGNAZ SEMMELWEIS was concerned at high incidence of puerperal
fever and latter instituted hand washing in chlorinated solutions;
ridiculed by colleagues and was dismissed; died of
STREPTOCOCCAL INFECTION
 JOHN SNOW: transmission of cholera due to contamination of the
river Thames….later confirmed by ROBERT KOCH in German
8
 Bacteriology is the study of bacteria.
 Mycology is the study of fungi.
 Parasitology is the study of protozoa and
parasitic worms.
 Recent advances in genomics, the study of an
organism’s genes, have provided new tools for
classifying microorganisms.
 Proteomics is looking at the gene products
Definitions
3/10/2014Dr.T.V.Rao MD 9
Classification of micro-organisms
 All living organisms are classified into:
Kingdom
Phylum (family)
Genus
Species
 Organisms that can cause disease are many and varied
and include:
Viruses
Bacteria
Fungi
Parasites 3/10/2014Dr.T.V.Rao MD 10
 Different:
Diseases
Modes of
transmission
Treatment-e.g.
routinely use
antibiotics don’t
cure vira
lfungalinfections
Relevance of Classification
3/10/2014Dr.T.V.Rao MD 11
Microorganisms
Non-cellular organism
Prokaryotes
Eukaryotes
Others Prions Viroid
Fungi
Bacterium
Virus
Dr.T.V.Rao MD 12
Prokaryotic cells Eukaryote cells
Small cell (< 5µm) Larger cells (> 10 µm)
Always unicellular Often multicellular
No nucleus or any membrane bound organelles Always have nucleus and membranes bound
organelles.
DNA circular, without proteins DNA is linear and associated with proteins to
form chromatin.
Ribosomes are small 70S Ribosomes are large 80S
No cytoskeleton Always have cytoskeleton
Motility by rigid rotating flagellum made from
flagellin
Motility by flexible waving cilia or flagella
made from tubulins.
Cell division is by binary fission Cell division is by meiosis and mitosis.
Reproduction is always asexual Reproduction is sexual and asexual.
Summary of differences between
prokaryote and eukaryote cells
Prokaryotic Cell Structure
• Prokaryotic cells are about 10 times smaller
than eukaryotic cells.
• prokaryotes are very simple cells when
compared with eukaryotic cells,
• Reproduction of prokaryotic cells is by binary
fission, the simple division of one cell into two
cells.
Bacteria
 Prokaryotes
 Peptidoglycan cell
walls
 Binary fission
 For energy, use
organic
chemicals, inorganic
chemicals, or
photosynthesisDr.T.V.Rao MD 15
Bacterial Cell Wall structure
Morphologic arrangements of
bacteria.
Capsule stain. The capsule stain is an example of a negative staining technique. The
bacterial cells and the background stain, but the capsules do not. The capsules are
seen as unstained “halos” around the bacterial cells.
Binary fission. Note that DNA replication must occur before the actual
splitting (fission) of the parent cell.
Pathogenic Prokaryotes
Mycoplasma
Bacteria
Spirochetes
Rickettsia
Chlamydiae
Actinomyces
Dr.T.V.Rao MD 20
Viruses
Viruses lack many of the attributes of cells, including the ability
to replicate. Only when it infects a cell does a virus acquire the
key attribute of a living system: reproduction
A viral particle consists of a nucleic acid molecule, either DNA
or RNA, enclosed in a protein coat, or capsid
Viruses are known to infect all cells, including microbial cells.
Host-virus interactions tend to be highly specific
Dr.T.V.Rao MD 21
Discovery of Virus
 Iwanovski
 a Russian chemist, 1892
 Tobacco Mosaic Disease
 Beijerinck confirmed
 Walter Reed, USA
 Yellow fever virus
 Ist human virus
Tobacco mosaic disease,
caused by the tobacco
mosaic virus
Dr.T.V.Rao MD 22
Viruses
 A virus is not a cell!
 Viruses are replicated only when
they are in a living host cell
 Consist of DNA or RNA core
 Core is surrounded by a protein
coat
 Coat may be enclosed in a lipid
envelope
Dr.T.V.Rao MD 23
What are Viruses
 Viruses Dependent on Host cells
for necessary functions and
Multiplication
Intracellular parasites
Contain either DNA or
RNA never both.
Dr.T.V.Rao MD 24
Fungi
 Complex, large organisms
 Eukaryotes (as are
humans!)
 Divided into yeasts &
moulds
 Cause a range of diseases
e.g.:
 Thrush
 Athletes foot
 Invasive & allergic
aspergillosis
 Many diseases are
opportunistic.
3/10/2014Dr.T.V.Rao MD 25
Protozoa
Eukaryotes
Absorb or ingest
organic chemicals
May be motile via
pseudopods, cilia,
or flagella
Figure 1.1c
3/10/2014Dr.T.V.Rao MD 26
Multicellular Animal Parasites
 Eukaryote
 Multicellular animals
 Parasitic flatworms and round worms are called Helminths.
 Microscopic stages in life cycles.
Figure 12.28a
3/10/2014Dr.T.V.Rao MD 27
Disease-causing microorganisms
are called pathogens.
 Pathogenic microorganisms have
special properties that allow
them to invade the human body or
produce toxins.
 When a microorganism overcomes
the body’s defenses, a state of
disease results.
Diseases and Infections
3/10/2014Dr.T.V.Rao MD 28
Pathology, Infection, and Disease
 Pathology is the scientific study of disease.
 Pathology is concerned with the
 etiology (cause),
 pathogenesis (development),
 effects of disease – structural and functional changes
brought about by disease.
 Infection is the invasion and growth of pathogens in the body.
 A host is an organism that shelters and supports the growth of
pathogens.
 Disease is an abnormal state in which part or all of the body is
not properly adjusted or is incapable of performing normal
functions.
 Infection disease – presence of particular microorganism in part
of the body where is not usually found. 3/10/2014Dr.T.V.Rao MD 29
Classifying Infectious Diseases
 Communicable diseases are transmitted directly
or indirectly from one host to another.
Chicken pox, genital herpes,
A contagious disease is one that is easily
spread from one person to another.
 Noncommunicable diseases are caused by
microorganisms that normally grow outside the
human body and are not transmitted from one host
to another
Tetanus, Clostridium tetani
3/10/2014Dr.T.V.Rao MD 30
 Recombinant DNA Technology
 Genes in
microbes, plants, and animals
manipulated for practical
applications
 Production of human blood-
clotting factor by E. coli to
aid hemophiliacs
 Gene Therapy
 Inserting a missing gene or
repairing a defective one in
humans by inserting desired
gene into host cells
The Modern Age of Microbiology
3/10/2014Dr.T.V.Rao MD 31
Discovery of Antimicrobial Agents
_________
 Alexander Fleming (1881 – 1955), a
Scottish biologist and
pharmacologist, observed
bacterial staphylococci colonies
disappearing on plates
contaminated with mold.
 Fleming extracted the compound
from the mold responsible for
destruction of the bacterial
colonies.
 The product of the mold was
named penicillin, after the
Penicillium mold from which it
was derived.
 Nobel Prize in Physiology of
Medicine in 1945.
Images: Penicillium mold, PHIL #8396; Staphylococcus aureus on
antibiotic test plate, PHIL #2641; Poster attached to a mailbox
offering advice to World War II servicemen, 1944, NIHFrom the Virtual Microbiology Classroom on ScienceProfOnline.com
3/10/2014 Dr.T.V.Rao MD 32
The Modern Age of Microbiology
 How Do We Defend Against Disease?
 Serology
The study of blood serum
Von Behring and Kitasato – existence in the blood
of chemicals and cells that fight infection
 Immunology
The study of the body’s defense against specific
pathogens
 Chemotherapy
Fleming discovered penicillin
Domagk discovered sulfa drugs
3/10/2014Dr.T.V.Rao MD 33
REFERENCES
 Picture on slide no: 1 taken from
http://www.123rf.com/photo_10012159_background-concept-wordcloud-
illustration-of-microbiology-science--microorganisms.html
 Picture on slide no: 15 taken from;
http://upload.wikimedia.org/wikipedia/commons/thumb/5/5a/Average_prok
aryote_cell-_en.svg/494px-Average_prokaryote_cell-_en.svg.png
 HISTORY OF MICRO ORGANISMS AND PICTURES, DR PRABESH K CHOUDHARY
http://www.authorstream.com/Presentation/prabeshc-1456031-medical-
microbiology-introduction/ 2001
 Definition of terms; Dr.T.V.Rao
MD, http://www.authorstream.com/Presentation/doctorrao-1594767-
microbiology-medical-graduates/ , 2014
 Notes on classification and pictures, DR PRABESH K CHOUDHARY
http://www.authorstream.com/Presentation/prabeshc-1456031-medical-
microbiology-introduction/
 Microbes diseases and pictures, R
Saravanan, http://www.authorstream.com/Presentation/rssrmcp-923598-
introduction-of-microbiology-saravanan/ , 2010
 NOTES BACTRIA AND VIRUS and pictures, vidhyakalai
http://www.authorstream.com/Presentation/vidhyakalai-1897393-history-
microbiology-vidyakalaivani/ 2000

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Micro organisms

  • 2. THE SCIENCE OF MICROBES
  • 3. What is Microbiology? Microbes, or microorganisms are minute living things that are usually unable to be viewed with the naked eye. What are some examples of microbes? Bacteria, fungi, protozoa, algae, viruses are examples! Some are pathogenic Many are beneficial Dr.T.V.Rao MD 3
  • 4. ………………continues  Study of different Microorganisms  Can be Bacteria Viruses Parasites Fungus 4
  • 6. Dutchman anton van leeuwenhoek observed microorganisms>>”animalcules” suspended in a drop of pond water in front of a ground hand lens 6
  • 7. History; contd.  ROBERT HOOKE built simple compound microscope and observed structure of thin layer of cork>>used the word “CELLS”  Theory of spontaneous generation: from non-living matter  Theory of biogenesis: from preexisting living cells  LOUIS PASTEUR>>Pasteur’ experiment>>boiled nutrient broth in a flask & curved it in to S-shape>>after cooling>>bacteria trapped in curve but no organism in flask; dicovered souring in alcohol is due to fermentation and can be prevented by heating wine at56oC for 30mins…..now called PASTEURISATION>> 7
  • 8. History contd;  IGNAZ SEMMELWEIS was concerned at high incidence of puerperal fever and latter instituted hand washing in chlorinated solutions; ridiculed by colleagues and was dismissed; died of STREPTOCOCCAL INFECTION  JOHN SNOW: transmission of cholera due to contamination of the river Thames….later confirmed by ROBERT KOCH in German 8
  • 9.  Bacteriology is the study of bacteria.  Mycology is the study of fungi.  Parasitology is the study of protozoa and parasitic worms.  Recent advances in genomics, the study of an organism’s genes, have provided new tools for classifying microorganisms.  Proteomics is looking at the gene products Definitions 3/10/2014Dr.T.V.Rao MD 9
  • 10. Classification of micro-organisms  All living organisms are classified into: Kingdom Phylum (family) Genus Species  Organisms that can cause disease are many and varied and include: Viruses Bacteria Fungi Parasites 3/10/2014Dr.T.V.Rao MD 10
  • 11.  Different: Diseases Modes of transmission Treatment-e.g. routinely use antibiotics don’t cure vira lfungalinfections Relevance of Classification 3/10/2014Dr.T.V.Rao MD 11
  • 12. Microorganisms Non-cellular organism Prokaryotes Eukaryotes Others Prions Viroid Fungi Bacterium Virus Dr.T.V.Rao MD 12
  • 13. Prokaryotic cells Eukaryote cells Small cell (< 5µm) Larger cells (> 10 µm) Always unicellular Often multicellular No nucleus or any membrane bound organelles Always have nucleus and membranes bound organelles. DNA circular, without proteins DNA is linear and associated with proteins to form chromatin. Ribosomes are small 70S Ribosomes are large 80S No cytoskeleton Always have cytoskeleton Motility by rigid rotating flagellum made from flagellin Motility by flexible waving cilia or flagella made from tubulins. Cell division is by binary fission Cell division is by meiosis and mitosis. Reproduction is always asexual Reproduction is sexual and asexual. Summary of differences between prokaryote and eukaryote cells
  • 14. Prokaryotic Cell Structure • Prokaryotic cells are about 10 times smaller than eukaryotic cells. • prokaryotes are very simple cells when compared with eukaryotic cells, • Reproduction of prokaryotic cells is by binary fission, the simple division of one cell into two cells.
  • 15. Bacteria  Prokaryotes  Peptidoglycan cell walls  Binary fission  For energy, use organic chemicals, inorganic chemicals, or photosynthesisDr.T.V.Rao MD 15
  • 16. Bacterial Cell Wall structure
  • 18. Capsule stain. The capsule stain is an example of a negative staining technique. The bacterial cells and the background stain, but the capsules do not. The capsules are seen as unstained “halos” around the bacterial cells.
  • 19. Binary fission. Note that DNA replication must occur before the actual splitting (fission) of the parent cell.
  • 21. Viruses Viruses lack many of the attributes of cells, including the ability to replicate. Only when it infects a cell does a virus acquire the key attribute of a living system: reproduction A viral particle consists of a nucleic acid molecule, either DNA or RNA, enclosed in a protein coat, or capsid Viruses are known to infect all cells, including microbial cells. Host-virus interactions tend to be highly specific Dr.T.V.Rao MD 21
  • 22. Discovery of Virus  Iwanovski  a Russian chemist, 1892  Tobacco Mosaic Disease  Beijerinck confirmed  Walter Reed, USA  Yellow fever virus  Ist human virus Tobacco mosaic disease, caused by the tobacco mosaic virus Dr.T.V.Rao MD 22
  • 23. Viruses  A virus is not a cell!  Viruses are replicated only when they are in a living host cell  Consist of DNA or RNA core  Core is surrounded by a protein coat  Coat may be enclosed in a lipid envelope Dr.T.V.Rao MD 23
  • 24. What are Viruses  Viruses Dependent on Host cells for necessary functions and Multiplication Intracellular parasites Contain either DNA or RNA never both. Dr.T.V.Rao MD 24
  • 25. Fungi  Complex, large organisms  Eukaryotes (as are humans!)  Divided into yeasts & moulds  Cause a range of diseases e.g.:  Thrush  Athletes foot  Invasive & allergic aspergillosis  Many diseases are opportunistic. 3/10/2014Dr.T.V.Rao MD 25
  • 26. Protozoa Eukaryotes Absorb or ingest organic chemicals May be motile via pseudopods, cilia, or flagella Figure 1.1c 3/10/2014Dr.T.V.Rao MD 26
  • 27. Multicellular Animal Parasites  Eukaryote  Multicellular animals  Parasitic flatworms and round worms are called Helminths.  Microscopic stages in life cycles. Figure 12.28a 3/10/2014Dr.T.V.Rao MD 27
  • 28. Disease-causing microorganisms are called pathogens.  Pathogenic microorganisms have special properties that allow them to invade the human body or produce toxins.  When a microorganism overcomes the body’s defenses, a state of disease results. Diseases and Infections 3/10/2014Dr.T.V.Rao MD 28
  • 29. Pathology, Infection, and Disease  Pathology is the scientific study of disease.  Pathology is concerned with the  etiology (cause),  pathogenesis (development),  effects of disease – structural and functional changes brought about by disease.  Infection is the invasion and growth of pathogens in the body.  A host is an organism that shelters and supports the growth of pathogens.  Disease is an abnormal state in which part or all of the body is not properly adjusted or is incapable of performing normal functions.  Infection disease – presence of particular microorganism in part of the body where is not usually found. 3/10/2014Dr.T.V.Rao MD 29
  • 30. Classifying Infectious Diseases  Communicable diseases are transmitted directly or indirectly from one host to another. Chicken pox, genital herpes, A contagious disease is one that is easily spread from one person to another.  Noncommunicable diseases are caused by microorganisms that normally grow outside the human body and are not transmitted from one host to another Tetanus, Clostridium tetani 3/10/2014Dr.T.V.Rao MD 30
  • 31.  Recombinant DNA Technology  Genes in microbes, plants, and animals manipulated for practical applications  Production of human blood- clotting factor by E. coli to aid hemophiliacs  Gene Therapy  Inserting a missing gene or repairing a defective one in humans by inserting desired gene into host cells The Modern Age of Microbiology 3/10/2014Dr.T.V.Rao MD 31
  • 32. Discovery of Antimicrobial Agents _________  Alexander Fleming (1881 – 1955), a Scottish biologist and pharmacologist, observed bacterial staphylococci colonies disappearing on plates contaminated with mold.  Fleming extracted the compound from the mold responsible for destruction of the bacterial colonies.  The product of the mold was named penicillin, after the Penicillium mold from which it was derived.  Nobel Prize in Physiology of Medicine in 1945. Images: Penicillium mold, PHIL #8396; Staphylococcus aureus on antibiotic test plate, PHIL #2641; Poster attached to a mailbox offering advice to World War II servicemen, 1944, NIHFrom the Virtual Microbiology Classroom on ScienceProfOnline.com 3/10/2014 Dr.T.V.Rao MD 32
  • 33. The Modern Age of Microbiology  How Do We Defend Against Disease?  Serology The study of blood serum Von Behring and Kitasato – existence in the blood of chemicals and cells that fight infection  Immunology The study of the body’s defense against specific pathogens  Chemotherapy Fleming discovered penicillin Domagk discovered sulfa drugs 3/10/2014Dr.T.V.Rao MD 33
  • 34. REFERENCES  Picture on slide no: 1 taken from http://www.123rf.com/photo_10012159_background-concept-wordcloud- illustration-of-microbiology-science--microorganisms.html  Picture on slide no: 15 taken from; http://upload.wikimedia.org/wikipedia/commons/thumb/5/5a/Average_prok aryote_cell-_en.svg/494px-Average_prokaryote_cell-_en.svg.png  HISTORY OF MICRO ORGANISMS AND PICTURES, DR PRABESH K CHOUDHARY http://www.authorstream.com/Presentation/prabeshc-1456031-medical- microbiology-introduction/ 2001
  • 35.  Definition of terms; Dr.T.V.Rao MD, http://www.authorstream.com/Presentation/doctorrao-1594767- microbiology-medical-graduates/ , 2014  Notes on classification and pictures, DR PRABESH K CHOUDHARY http://www.authorstream.com/Presentation/prabeshc-1456031-medical- microbiology-introduction/  Microbes diseases and pictures, R Saravanan, http://www.authorstream.com/Presentation/rssrmcp-923598- introduction-of-microbiology-saravanan/ , 2010  NOTES BACTRIA AND VIRUS and pictures, vidhyakalai http://www.authorstream.com/Presentation/vidhyakalai-1897393-history- microbiology-vidyakalaivani/ 2000