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Evolution

AND THE ORIGIN OF LIFE
Keywords

THINKS TO KNOW
Species

 Reproductively
  isolated systems of
  breeding
  populations with
  similar morphology.
 In simple terms;
  organisms, that look
  the same, that are
  able to breed and
  produce fertile
  offspring.
Adaptation & Mutation

 Adaptation
   The evolutionary process whereby an organism becomes
    better able to live in its habitat
   The change of an organism to be better suited to live in
    its respective environment
 Mutation
   Changes in the DNA caused by radiation, viruses and
    errors in DNA replication
   A change in the DNA that causes a significant change in
    the organism’s phenotype or expressed traits
Common Decent, Ancestor & Descendant

 Common Decent
   A group of organisms that share the same ancestor

   Organisms that descended from the same organism

 Ancestor
   An earlier type

   A progenitor

 Descendant
   A later evolutionary type

   The offspring of an earlier organism
Variation and Natural Selection

 Variation
   The difference in characteristics typical of the group

   The difference between an organism’s traits and another
    of the same species
 Natural Selection
   The process where favorable traits become more
    common in each successive generation
   The process where nature selects the traits that best suit
    the environment the particular organism lives in
Missing Link



 The
 intermediate
 organism
 between
 arthropod
 apes and
 humans
Genetics, DNA & Genes

 Genetics
   The study of the patterns of inheritance of specific traits

 DNA
   Deoxyribonucleic acid

   Contains the genetic material for cell growth, division
    and function
 Genes
   Segments of DNA that are located on the chromosomes

   Controls the traits of an organism
RNA, Allele & Heredity

 RNA
   Ribonucleic acid

   Single stranded

 Allele
   One member of a pair of genes occupying a specific
    part on the chromosome
   Can either be dominant of recessive

 Heredity
   The passing on of traits from parent to offspring
Central Dogma, Nucleotides & Proteins

 Central Dogma
   DNA is the carrier of genetic information in organisms.

 Nucleotides
   Structural unit of DNA/RND

   Made up of a 5-carbon sugar, a 3-phosphate group and
    one of 5 nitrogen bases; namely
    Adenine, Thymine, Guanine, Cytosine and Uracil
 Proteins
   Chains of amino acids
Chromosomes & Genetic Drift

 Chromosomes
   Organized structure of DNA and proteins

   Controls the expressed traits of an organism

 Genetic Drift
   A change in allele frequency

   Can be caused by a change in the environmental
    conditions or a change in the reproductive selection of
    the species
Phylogenetic Tree



 A branching
 diagram
 showing
 inferred
 evolutionary
 relationship
Convergent and Divergent Evolution

 Convergent Evolution
   Different organisms develop similar traits to serve similar
    functions
       Butterfly and Bird. They developed wings for the same
        purpose.
 Divergent Evolution
   Similar organisms evolve to become more diverse until
    they eventually become different species
   An population becomes separated and each separate
    population adapts to a different niche and does so until
    they become two different species
Scientists

WHO CONTRIBUTED TO THE THEORY
Carolus Linnaeus (1707-1778)

 Swedish Naturalist
 Nested Hierarchies
 Order of Nature
 Systema Naturae (1735)
 Father of Taxonomy
 Organized from species
  to kingdom
 Two-part Name
    Binomial Nomenclature
Carolus Linnaeus (1707-1778)

Influenced by
 Plato
    Idealism and essentialism
 Aristotle
   Scala Naturae, The Great Chain of Being

   Organisms are arranged in increasing complexity

 Judeo - Christian
   Creationism

   Species are individually designed and are permanent
Thomas Malthus (1766-1834)

 English economist and clergyman
 “An Essay on the Principles of Populations”
 Food supply
   Arithmetic

 Population growth
   Geometric, logarithmic


 Food supply
 limits
 population
 growth
Georges Cuvier (1769-1832)

 French Paleontologist
 Catastrophism
   A catastrophic event leads to extinctions of species that
    are replaced by distant migrating species
 Earth’s age
   4000 - 6000

 Strongly opposed evolution
 The history of living organisms are recorded in
  layers of as fossils
Jean Baptiste Lamarck


 French naturalist
 Early concepts of evolution
 Philosophie Zoologique (1809)
   Desire to change

   Use and disuse

   Passing on of acquired traits

 Species change over time into new species via
 natural processes
Charles Lyell

 Scottish geologist
 Principles of Geology (1830)
 Uniformitarianism
 Geological processes are so uniform that their
 rates and effects must balance out

Influenced by
 James Hutton (1726-1797)
    Gradualism
Gregor Mendel (1832-1884)

 Austrian Monk
 Father of genetics
 Proposed the laws of inheritance
 Used pea plants with different characteristics
Alfred Russel Wallace


 British Naturalist
 Studied in the Amazon
  Forest and in the
  Malaysian Isles
 “On the Tendency of
  Varieties to Depart
  from the Original
  Type”
Charles Robert Darwin

 English Naturalist
 Studied in the
  Galapagos Islands
 “On the Origin of
  Species by means of
  Natural Selection or
  the Preservation of
  Favored Races in the
  Struggle for Life”
Evidences

PALEOEMBRYOANATOGEOCHEMISTRY
Paleontology

 Organisms evolved in a historical sequence
 The present id linked to the past
 Fossils form by chance and the quality varies
 Fossil reconstruction requires a thorough
  knowledge of Anatomy
 Fossil
     Preserved remains or traces of organisms
 Dating rocks and fossils
   Geological or relative dating (strata)

   Numerical or radiometric dating (isotopes)
Comparative Anatomy

 Homologous Structures
   Features with different functions but similar structure due
    to common ancestry
   Due to divergent evolution

   One species gives rise to many species that appear
    different externally but are similar internally
 Analogous Structures
   Similar in appearance and function but of different origins

   Due to convergent evolution

   Different organisms develop similar structures to serve the
    same purpose
Comparative Embryology


 Closely related organisms often have similar
  stages or structure during early development
 Similarities in early development should mean
  that similar genes are at work
 This is like a heritage acquired from their
  common ancestor
Biochemistry

 Similarity of the DNA between individuals
 determine their degree of relatedness

 Based on the
 concept that similar
 proteins are based
 from the same DNA
 or a common
 genetic code
 creates the same
 protiens
Biogeography


 Observations about marsupial distribution show
  that they are only found in America, Australia
  and New Guinea
 Species were not distributed everywhere that
  they could survive
 Islands have species endemic but are closely
  related to species on the mainland
The 5 Evidences for Evolution

 Fossil Record
   Paleontology

 Similarities in Body Structure
   Comparative Anatomy

 Similarities in Early Development
   Comparative Embryology

 Similarities in Chemical Compounds
   Biochemistry

 Distribution of Species
   Biogeography
Genetics

 A G T C U
Scientists

Rediscovered Mendel’s work
 Hugo de Vries
 Carl Correns
 Erich von Tshermak-Seysenegg


Discovered the structure of DNA
 James Watson
 Francis Crick
Nucleic Acids

 Polymers made up of monomers called
  nucleotides
 There are 2 kinds
    DNA – uses A, T, G, C
    RNA – uses A, U ,G, C
 Stores and transmits information from one
  generation to another
 Found in the nucleus of all cells
Proteins, Genes & Alleles

 Protein
   Polymers made up of monomers called amino acids

   Workhorses of living systems

 Gene
   A segment of DNA that codes for a particular trait

   The basic unit of heredity

 Allele
   A particular form of a gene
Genetic Code

 Set of rules by which information in DNA/RNA is
  translated into amino acid sequences
 Red in
  groups of
  three
  called
  codons
Traits

There are two kinds of traits
 Single-gene trait
    Only controlled by a pair of genes
    There are only two varieties
    Example, Presence of the widow's peak
 Polygenic trait
   Controlled by numerous genes

   Has multiple varieties

   Example, Height.
Natural Selection as an Evolutionary Mechanism

 Overproduction
   Each species produce more offspring than will survive to
    maturity
 Variation
   There is a variation of traits among the offspring

 Competition
   Organisms compete with one another for limited resources

 Survival to Reproduce
   Individuals that passes the most favorable combination of
    characteristics are most likely to survive and reproduce
Genetic Variation

 Mutation
   Any change in the DNA sequence
    Due to an error in DNA replication
    Due to environmental factors such as radiation

 Gene Shuffling / Genetic Recombination
   Results from sexual reproduction

 Genetic Drift
   When an allele becomes more common in a population
    by chance
      Implies that all characteristics of an organism don’t have to
       contribute to the fitness of the organism to be favored
Genetic Variation

 Natural selection is not always necessary for
  genetic change to occur
 Genetic variation is not controlled or directed
  toward a cause. When a variation does occur,
  natural selection goes to work
 If a species has enough genetic variation for it
  to evolve quickly enough to keep up with the
  environment, it will survive; if not, it will become
  extinct
Ecology & Evolution

 No two species can occupy the same niche in
  the same location for a long period of time
     This idea helps us understand how one species evolves
      into many species
 Speciation by Reproductive Isolation
   Separation of populations stops interbreeding between
    the two
   Separate populations adapt to different environments so
    the gene pool becomes dissimilar
   The long separation eventually inhibits the interbreeding
    between the two populations permanently

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Evolution

  • 3. Species  Reproductively isolated systems of breeding populations with similar morphology.  In simple terms; organisms, that look the same, that are able to breed and produce fertile offspring.
  • 4. Adaptation & Mutation  Adaptation  The evolutionary process whereby an organism becomes better able to live in its habitat  The change of an organism to be better suited to live in its respective environment  Mutation  Changes in the DNA caused by radiation, viruses and errors in DNA replication  A change in the DNA that causes a significant change in the organism’s phenotype or expressed traits
  • 5. Common Decent, Ancestor & Descendant  Common Decent  A group of organisms that share the same ancestor  Organisms that descended from the same organism  Ancestor  An earlier type  A progenitor  Descendant  A later evolutionary type  The offspring of an earlier organism
  • 6. Variation and Natural Selection  Variation  The difference in characteristics typical of the group  The difference between an organism’s traits and another of the same species  Natural Selection  The process where favorable traits become more common in each successive generation  The process where nature selects the traits that best suit the environment the particular organism lives in
  • 7. Missing Link  The intermediate organism between arthropod apes and humans
  • 8. Genetics, DNA & Genes  Genetics  The study of the patterns of inheritance of specific traits  DNA  Deoxyribonucleic acid  Contains the genetic material for cell growth, division and function  Genes  Segments of DNA that are located on the chromosomes  Controls the traits of an organism
  • 9. RNA, Allele & Heredity  RNA  Ribonucleic acid  Single stranded  Allele  One member of a pair of genes occupying a specific part on the chromosome  Can either be dominant of recessive  Heredity  The passing on of traits from parent to offspring
  • 10. Central Dogma, Nucleotides & Proteins  Central Dogma  DNA is the carrier of genetic information in organisms.  Nucleotides  Structural unit of DNA/RND  Made up of a 5-carbon sugar, a 3-phosphate group and one of 5 nitrogen bases; namely Adenine, Thymine, Guanine, Cytosine and Uracil  Proteins  Chains of amino acids
  • 11. Chromosomes & Genetic Drift  Chromosomes  Organized structure of DNA and proteins  Controls the expressed traits of an organism  Genetic Drift  A change in allele frequency  Can be caused by a change in the environmental conditions or a change in the reproductive selection of the species
  • 12. Phylogenetic Tree  A branching diagram showing inferred evolutionary relationship
  • 13. Convergent and Divergent Evolution  Convergent Evolution  Different organisms develop similar traits to serve similar functions  Butterfly and Bird. They developed wings for the same purpose.  Divergent Evolution  Similar organisms evolve to become more diverse until they eventually become different species  An population becomes separated and each separate population adapts to a different niche and does so until they become two different species
  • 15. Carolus Linnaeus (1707-1778)  Swedish Naturalist  Nested Hierarchies  Order of Nature  Systema Naturae (1735)  Father of Taxonomy  Organized from species to kingdom  Two-part Name  Binomial Nomenclature
  • 16. Carolus Linnaeus (1707-1778) Influenced by  Plato  Idealism and essentialism  Aristotle  Scala Naturae, The Great Chain of Being  Organisms are arranged in increasing complexity  Judeo - Christian  Creationism  Species are individually designed and are permanent
  • 17. Thomas Malthus (1766-1834)  English economist and clergyman  “An Essay on the Principles of Populations”  Food supply  Arithmetic  Population growth  Geometric, logarithmic  Food supply limits population growth
  • 18. Georges Cuvier (1769-1832)  French Paleontologist  Catastrophism  A catastrophic event leads to extinctions of species that are replaced by distant migrating species  Earth’s age  4000 - 6000  Strongly opposed evolution  The history of living organisms are recorded in layers of as fossils
  • 19. Jean Baptiste Lamarck  French naturalist  Early concepts of evolution  Philosophie Zoologique (1809)  Desire to change  Use and disuse  Passing on of acquired traits  Species change over time into new species via natural processes
  • 20. Charles Lyell  Scottish geologist  Principles of Geology (1830)  Uniformitarianism  Geological processes are so uniform that their rates and effects must balance out Influenced by  James Hutton (1726-1797)  Gradualism
  • 21. Gregor Mendel (1832-1884)  Austrian Monk  Father of genetics  Proposed the laws of inheritance  Used pea plants with different characteristics
  • 22. Alfred Russel Wallace  British Naturalist  Studied in the Amazon Forest and in the Malaysian Isles  “On the Tendency of Varieties to Depart from the Original Type”
  • 23. Charles Robert Darwin  English Naturalist  Studied in the Galapagos Islands  “On the Origin of Species by means of Natural Selection or the Preservation of Favored Races in the Struggle for Life”
  • 25. Paleontology  Organisms evolved in a historical sequence  The present id linked to the past  Fossils form by chance and the quality varies  Fossil reconstruction requires a thorough knowledge of Anatomy  Fossil  Preserved remains or traces of organisms  Dating rocks and fossils  Geological or relative dating (strata)  Numerical or radiometric dating (isotopes)
  • 26. Comparative Anatomy  Homologous Structures  Features with different functions but similar structure due to common ancestry  Due to divergent evolution  One species gives rise to many species that appear different externally but are similar internally  Analogous Structures  Similar in appearance and function but of different origins  Due to convergent evolution  Different organisms develop similar structures to serve the same purpose
  • 27. Comparative Embryology  Closely related organisms often have similar stages or structure during early development  Similarities in early development should mean that similar genes are at work  This is like a heritage acquired from their common ancestor
  • 28. Biochemistry  Similarity of the DNA between individuals determine their degree of relatedness  Based on the concept that similar proteins are based from the same DNA or a common genetic code creates the same protiens
  • 29. Biogeography  Observations about marsupial distribution show that they are only found in America, Australia and New Guinea  Species were not distributed everywhere that they could survive  Islands have species endemic but are closely related to species on the mainland
  • 30. The 5 Evidences for Evolution  Fossil Record  Paleontology  Similarities in Body Structure  Comparative Anatomy  Similarities in Early Development  Comparative Embryology  Similarities in Chemical Compounds  Biochemistry  Distribution of Species  Biogeography
  • 31. Genetics A G T C U
  • 32. Scientists Rediscovered Mendel’s work  Hugo de Vries  Carl Correns  Erich von Tshermak-Seysenegg Discovered the structure of DNA  James Watson  Francis Crick
  • 33. Nucleic Acids  Polymers made up of monomers called nucleotides  There are 2 kinds  DNA – uses A, T, G, C  RNA – uses A, U ,G, C  Stores and transmits information from one generation to another  Found in the nucleus of all cells
  • 34. Proteins, Genes & Alleles  Protein  Polymers made up of monomers called amino acids  Workhorses of living systems  Gene  A segment of DNA that codes for a particular trait  The basic unit of heredity  Allele  A particular form of a gene
  • 35. Genetic Code  Set of rules by which information in DNA/RNA is translated into amino acid sequences  Red in groups of three called codons
  • 36. Traits There are two kinds of traits  Single-gene trait  Only controlled by a pair of genes  There are only two varieties  Example, Presence of the widow's peak  Polygenic trait  Controlled by numerous genes  Has multiple varieties  Example, Height.
  • 37. Natural Selection as an Evolutionary Mechanism  Overproduction  Each species produce more offspring than will survive to maturity  Variation  There is a variation of traits among the offspring  Competition  Organisms compete with one another for limited resources  Survival to Reproduce  Individuals that passes the most favorable combination of characteristics are most likely to survive and reproduce
  • 38. Genetic Variation  Mutation  Any change in the DNA sequence  Due to an error in DNA replication  Due to environmental factors such as radiation  Gene Shuffling / Genetic Recombination  Results from sexual reproduction  Genetic Drift  When an allele becomes more common in a population by chance  Implies that all characteristics of an organism don’t have to contribute to the fitness of the organism to be favored
  • 39. Genetic Variation  Natural selection is not always necessary for genetic change to occur  Genetic variation is not controlled or directed toward a cause. When a variation does occur, natural selection goes to work  If a species has enough genetic variation for it to evolve quickly enough to keep up with the environment, it will survive; if not, it will become extinct
  • 40. Ecology & Evolution  No two species can occupy the same niche in the same location for a long period of time  This idea helps us understand how one species evolves into many species  Speciation by Reproductive Isolation  Separation of populations stops interbreeding between the two  Separate populations adapt to different environments so the gene pool becomes dissimilar  The long separation eventually inhibits the interbreeding between the two populations permanently