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Biology is the study of life and living
organisms, from one-celled creatures to
the most complex living organism of all —
the human being.
Biology includes the study of genes and
cells that give living things their special
characteristics.
All living things share some basic properties.
Cellular Organization
Reproduction
Metabolism (Obtain and Use Energy)
Homeostasis
Heredity
Responsiveness
Growth and Development
Adapt Through Evolution
Unicellular Organisms
Entire organism is made up of one single cell
Bacteria and protists
Smallest unit capable of all life functions

Multicellular Organisms
The organism is made up of many
cells
Cells have specialized functions
within the organism
Reproduction is the process of producing new organisms
of the same type
Asexual Reproduction
A single parent organism reproducing by itself

Sexual Reproduction
Two different parent organisms contribute genetic
information
Involves the combination of male and female sex
cells
Living organisms need energy to grow,
develop, repair damage, and
reproduce

Anabolism
The process of building up complex substances
from simpler substances
 Building up cells and cellular components
 Photosynthesis
Catabolism
The process of breaking down complex
substances into simpler substances to release
energy
 Digestion
 Cellular Respiration
Metabolism
The total of all chemical reactions in an
organism
 Anabolism + Catabolism = Metabolism

A stable state of conditions in the body that
are necessary for life
Body temperature
Blood volume
pH balance
(Blood7.34–7.45)
Water balance

Genes carry hereditary information
Genes are composed of DNA
Heredity is the reason children resemble their parents
“Mutations change
DNA code and can be
passed from
generation to
generation”.

Organisms react to stimuli:
Light
Temperature
Odor
Sound
Gravity
Heat
Water
Pressure
An example is a plant’s leaves
and stems growing toward light

Growth means to get bigger in size

Development involves a change in the
physical form or physiological make-up of an
organism

Adaptation
A process that enables
organisms to become better
suited to their environment
 Species obtain adaptations
through evolution over great
periods of time

An Example of Adaptation
Desert plants have succulent waxy leaves and
stems to store water and reduce water loss
What is classification?
Classification is the grouping of living
organisms according to similar structures
and functions.
Aristotle grouped animals
according to the way they
moved.
As living things are constantly being
investigated, new attributes are
revealed that affect how organisms are
placed in a standard classification
system.
Taxonomy is the branch of biology
concerned with the grouping and
naming of organisms.
Biologists who study this are called
taxonomists.
People wanted to organize their
world so they began grouping,
or classifying everything they
saw.
To help us see relationships, similarities
and differences.
To help us organize all the organisms we
discover . . .
To give every species a name based on
a standard method so scientists from
different countries can talk about the
same animal without confusion.
Carolus Linnaeus was a Swedish botanist.
Developed a 7-level (taxa) classification system
based on similarities between organisms.
Developed by Carolus Linnaeus.
Two-name system:
First name is the organism’s genus.
Second name is the organism’s species.
The first letter of the genus is ALWAYS
capitalized.
The first letter of the species is NEVER
capitalized.
Scientific names of organisms are always
italicized or underlined
29
• Taxon ( taxa-plural) is a category into
which related organisms are placed
• There is a hierarchy of groups (taxa)
from broadest to most specific
• Domain, Kingdom, Phylum, Class,
Order, Family, Genus, species
copyright cmassengale
Domain
Kingdom
Phylum
Class
Order
Family
Genus
Species
31
Hierarchy-Taxonomic Groups
• Domain
• Kingdom
• Phylum (Division – used for plants)
• Class
• Order
• Family
• Genus
• Species
BROADEST TAXON
Most Specific
copyright cmassengale
32copyright cmassengale
HISTORY OF CLASSIFICATION
ARISTOTLE
DIVIDED LIVING
THINGS INTO
TWO KINGDOMS
CAROLLUS LINNAEUS
DEVELOPED THE
CLASSIFICATION ON
SIMILAR PROPERTIES,
FOUND BINOMIAL
NOMENCLATURE AS A
SYSTEM TO GIVE A
SCIENTIFIC NAME
ROBERT WHITTAKER
HE GAVE FIVE
KINGDOMS SYSTEM
Domains
Domains are the broadest taxonomic
classification of living organisms
The three Domains:
Archaea
Bacteria
Eukarya
35
• Broadest, most inclusive taxon
• Three domains
• Archaea and Eubacteria are unicellular
prokaryotes (no nucleus or membrane-
bound organelles)
• Eukarya are more complex and have a
nucleus and membrane-bound
organelles
Domains
copyright cmassengale
Domains are Divided into Kingdoms
Archaea----- Archaebacteria
Bacteria ------ Eubacteria
Eukarya ------- Protist
Fungi
Plantae
Animalia
How does it work?
There are 6 broad kingdoms
Every living thing that we know of fits into
one of the six kingdoms
Each level gets more specific as fewer
organisms fit into any one group
38
ARCHAEA
• Probably the 1st cells to evolve
• Live in HARSH environments
• Found in:
– Sewage Treatment Plants
– Thermal or Volcanic Vents
– Hot Springs or Geysers that are acid
– Very salty water (Dead Sea; Great Salt
Lake)
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39
ARCHAEAN
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40
EUBACTERIA
• Some may cause DISEASE
• Found in ALL HABITATS except harsh
ones
• Important decomposers for
environment
• Commercially important in making
cottage cheese, yogurt, buttermilk, etc.
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41
Live in the intestines of animals
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42
Domain Eukarya is Divided into
Kingdoms
• Monera (true bacteria (eubacteria)
and cyanobacteria (blue-green
algae).
• Protista (protozoans, algae…)
• Fungi (mushrooms, yeasts …)
• Plantae (multicellular plants)
• Animalia (multicellular animals)
copyright cmassengale
By: ROBERT WHITTAKER
KINGDOM MONERA
• Unicellular
• Prokaryotic
• Cell wall is non cellulosic
• Nutrition - autotrophic or heterotrophic
•Locomotion – flagella, gliding or non motile.
•Reproduction – conjugation, transduction and
transformation
Bacteria Bacteria types
45
Protista
•Most are unicellular
•Some are
multicellular
•Some are
autotrophic, while
others are
heterotrophic
•Aquatic
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46
Fungi
• Multicellular,
except yeast
• Absorptive
heterotrophs
(digest food
outside their
body & then
absorb it)
• Cell walls made
of chitin
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Yeast
Sporangial forms
Amanita musaria Bracket fungi
48
Plantae
•Multicellular
•Autotrophic
•Absorb sunlight to
make glucose –
Photosynthesis
•Cell walls made of
cellulose
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Bryophytes
Polytricum sp. female gametopytes Polytricum sp. male gametopytes
Pteridophytes
Fern (Nephrolepis)
Gymnosperms
Thuja Pine
Angiosperms
53
Animalia
• Multicellular
• Ingestive
heterotrophs
(consume food &
digest it inside
their bodies)
• Feed on plants or
animals
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54copyright cmassengale
55copyright cmassengale
Organizational Hierarchy of Life
Most
Complex
Least
Complex sub-atomic particles
atom
molecule
macromolecule
organelle
cell
tissue
organ
organ system
organism
population
community
ecosystem
biosphere
protons, neutrons, electrons
nitrogen
nucleotide
DNA
nucleus
neuron
nervous tissue
brain
nervous system
fish
school of fish
coral reef populations
coral reef (living + nonliving)
inhabitable regions of earth
Biological Levels of Organization
Basic Concept of Cell & its
Function
What are Cells?
• What is a cell?
• Where do we find cells?
Cell: “A cell is a basic unit of structure and
function of life. In other words, cells
make up living things and carry out
activities that keep a living thing alive”.
Cells Continued
• What makes a cell?
• A cell is a living thing.
• Cells are able to make more cells like
themselves.
• Interesting Fact: “New cells can only come
from existing cells (cells that are already
made)”.
• In 1660s there was a man named Robert
Hooke. Robert lived in Britain and was a
scientist. He was the first person to
observe cells.
• Robert took a piece bark from an old oak
tree and looked at it through a
microscope.
• The bark looked like it was made up
of many small rooms (kind of like a
house with many bedrooms). He
named the rooms, or structures, he
saw under the microscope as cells.
Therefore, he Coined the term cell
• THIS IS HOW THE WORD CELLS
CAME TO BE!!
Cell Theory:
1. All living things are composed of cells.
2. Cells are the basic units of structure and
function in living things.
3. New cells are produced from existing cells.
Schleiden
Schwann Virchowwww.nerdscience.com
« Omnis cellula e cellula »
• Cells are the basic units of organisms
–Cells can only be observed under microscope
• Two basic types of cells:
Animal Cell Plant Cell
Plant Cell
–Made of cellulose
which forms very thin
fibres
–Strong and rigid
–In plant cells only
• Cell wall
– Protect and support
the enclosed
substances
(protoplasm)
– Resist entry of excess
water into the cell
– Give shape to the cell
• Cell wall
Plant Cell
–A dead layer
–Large empty spaces
present between
cellulose fibres
freely permeable
• Cell wall
Plant Cell
–Lies immediately
against the cell wall
–Made of protein and
lipid Selectively
permeable
• Cell membrane
Plant Cell
–A living layer
–Can control the
movement of
materials into and
out of the cell
• Cell membrane
Plant Cell
–Jelly-like substance
enclosed by cell
membrane
–Provide a medium for
chemical reactions to
take place
• Cytoplasm
Plant Cell
–Contains organelles
and granules :
•e.g. chloroplast
•e.g. mitochondria
• Cytoplasm
Plant Cell
Organelles
 very small size – can only be
observed under electron
microscope
 has specific functions
 in cytoplasm
–Contains the green
pigment chlorophyll
•To trap light energy,
to make food by
photosynthesis
Plant Cell
• Chloroplast
–Contain starch grains
(products of
photosynthesis)
• Chloroplast
Plant Cell
–Rod shape
–For respiration
Plant Cell
• Mitochondrion
( mitochondria )
– Active cells ( eg.
sperms, liver cells)
have more
mitochondria
Plant Cell
• Mitochondrion
( mitochondria )
–Starch granules
–Oil droplets
–Crystals of insoluble
wastes
Plant Cell
• Non-living
granules
– large central vacuole
– Surrounded by tonoplast
– Contains cell sap
• a solution of chemicals
(sugars, proteins,
mineral salts, wastes,
pigments)
Plant Cell
• Vacuole
–Control the normal
activities of the cell
–Bounded by a
nuclear membrane
–Contains thread-like chromosomes
Plant Cell
• Nucleus
–Each cell has fixed
number of chromosomes
• Chromosomes carry
genes
–genes control cell characteristics
• Nucleus
Plant Cell
mitochondrion
nucleus
glycogen
granule
cell
membrane
cytoplasm
Animal cell
• No cell wall and
chloroplast
• Stores glycogen
granules and oil
droplets in the
cytoplasm
vacuole
Different kinds of animal cells
white blood cell
red blood cell
cheek cells
sperm
nerve cell
muscle cell
Amoeba
Paramecium
Similarities between plant cells
and animal cells
Both have a cell membrane surrounding
the cytoplasm
Both have a nucleus
Both contain mitochondria
Differences between plant cells
and animal cells
Animal cells Plant cells
Relatively smaller in
size
Irregular shape
No cell wall
Relatively larger in
size
Regular shape
Cell wall present
Animal cells Plant cells
Vacuole small or absent
Glycogen granules as
food store
Nucleus at the centre
Large central vacuole
Starch granules as
food store
Nucleus near cell wall
Differences between plant cells
and animal cells
Structure Animal cells Plant cells
cell membrane Yes yes
nucleus Yes yes
nucleolus yes yes
ribosomes yes yes
ER yes yes
Golgi yes yes
centrioles yes no
cell wall no yes
mitochondria yes yes
cholorplasts no yes
One big vacuole no yes
cytoskeleton yes Yes
Cell Type Example
Prokaryotic Bacteria
Eukaryotic Protists
Fungi
Plants
Animals
The distinction between prokaryotes and eukaryotes is
considered to be the most important distinction among
groups of organisms.
Eukaryotic cells contain membrane-bound organelles,
such as nucleus, while prokaryotic cells do not.
Differences in cellular structure of prokaryotes and
eukaryotes include the presence of mitochondria and
chloroplasts, the cell wall, and the structure of
chromosomalDNA.
Prokaryotes were the only form of life on Earth for
millions of years until more complicated eukaryotic cells
came into being through the process of evolution.
• In Greek:
–Pro = before
–karyotic = nucleus
• Cell that do not
have a nucleus
• Bacteria
• In Greek:
–Eu = True
–Karyotic = nucleus
• Cell that have a
nucleus
In this PowerPoint you will
learn the following:
• Different cell parts
• What function each part has
Even if cells are very tiny,
they are made up of
smaller parts, and the
parts do different jobs.
Cell organelles are of 2 types..
• Membranous Organelles:
1. Rough Endoplasmic reticulum.
2. Smooth endoplasmic reticulum.
3. Mitochondria.
4. Golgi.
5. Lysosomes.
• Non membranous Organelles.
1.Ribosomes.
2.Cytoskeletal structures.
As you can see cells have many parts.
Cell wall
• Only found surrounding plant, fungal and
bacterial cells
• Its purpose is to shape and protect the cell like
the outside wall of a shopping mall, which
provides shape and protection for it.
• “Supporter and Protector”
Cell membrane
The cell membrane holds
and protects the cell.
It controls what substances
come into and out of the cell
like an entrance you have to
pass to get into the shopping
mall.
“Gate of the Cell”.
Surrounds all cells.
In a plant cell, it lies
beneath the cell wall.
In animal cells, it is the
outer boundary (made of Cell
Membrane
cholesterol)
Cell membrane
Provides cell with
– Protection
– Control of
movement of
materials in/out of
cell
– Support
– Maintains condition
of cell
Function
• Regulates the movement of materials from one
environment to the other.
• Transports raw materials into the cell and waste
out of the cell.
• Prevents the entry of unwanted matter and the
escape of needed materials.
• Maintain a steady environment: Homeostasis
Cytoplasm
• The cytoplasm is the watery, gel-like material in
which cell parts move and cell activities take place
like the hallways of the mall where people move.
• “Area of Movement”
Found in both plant and
animal cells
• Clear, thick, jelly-like
Material.
• Located beneath cell
Membrane.
• Supports and protects cell
Organelles.
• It’s like the sidewalks that
are found throughout a
city!
Cytoplasm
Mitochondria
• Mitochondria produces most of the energy for the
cell, like an electrical system of the shopping mall,
which supplies electrical energy.
• “Powerhouse of the cell”
Found in both plant and
animal cells.
Looks like a jellybean
Breaks down sugar
molecules to release usable
energy.
Has inner foldings
(Cristae) that increase
the internal surface area.
It’s like a city’s power
plant!
Mitochondria are the only
organelles to have their own genetic
material.
In EM it can be seen that mitochondria are
bounded by double unit membrane.
These membrane are separated by narrow
intramembranous space
Inner membrane is four or five times
larger than outer membrane.
Outer membrane is fairly permeable, inner
membrane is highly selective.
Interior of the mitochondrian is filled with
mitochondrial matrix of slightly higher
electron density than the surrounding
cytoplasm.
Mitochondria are renewed on a continuous
basis throughout the cell cycle.
The number and size of mitochondria give
an indication of the energy requirements.
Mitochondria primarily concerned with
the chemical process by which energy is
made available to the cell in the form of ATP.
ATP is often referred to as the energy
“currency of cell”
Main site of aerobic respiration.
• This DNA is inherited maternally.
• Mitochondria are also significant participants in
many versions of apoptosis, and altered
mitochondrial function appears to be associated
with various cancerous changes in cells.
• In cell hypertrophy- increase in number of
mitochondria in cells
• In cell atrophy- decrease in no. of
mitochondria's in cells.
Mitochondrial DNA
Chloroplast
• Chloroplast is only in plant cells, like the cell wall. It
contains chlorophyll, which captures energy from
sunlight and uses it to produce food for the cell like
the pizza shop in the mall that makes food.
• “Food Producers”
• Green in color due to chlorophyll.
Vacuoles
• The vacuoles store food, water, and chemicals, like
water tank and pipes of the mall, which store
water.
• “Storage Tanks”
Found in both plant and
animal cells
– In plant cells: very
few and very large
Vacuoles
– In animal cells:
many little ones
Fluid-filled sacs
Vacuoles
Identified in 1833 by
Robert Brown
Found in both plant
and animal cells
Nucleus
Large, oval shape
Centrally located in cell
Controls cell activities
Contains genetic
information (DNA)
Nucleus
• Nucleus regulates and controls cell activities,
acting like the “brain” of the cell, like the mall
office, which regulates and controls activities of
the shopping mall.
• “Control Center”
NUCLEUS
• Most prominent
organelle.
• All cells in the body
contain nucleus
except mature RBCs
& uppermost layer of
skin.
Cell Nucleus: Functions
• Bag of chromosomes: It contains most of the
cell's genetic material.
• Storage of DNA, DNA maintenance
• Replication & repair of DNA
• Site of transcription & post transcriptional
processing/ modification
The control center of a cell:
-Controls the activities of cell
by regulating gene expression.
- Production of ribosomal
subunits in the nucleolus
Nucleolus: Actively transcribing
region of nucleus
• Synthesis of rRNA
• Formation of ribosome
subunits
Nuclear membrane
• The nuclear membrane protects the nucleus and
also allow substances to pass in and out of the
nucleus, as the cell membrane does the same for
the cell; like the main office; like the walls of the
mall and its entrance, which protect the office and
let workers in and out.
• “Gate of the Nucleus”
FUNCTIONS CONT.
Nuclear membrane Compartmentalizes the
nucleus
Nuclear pore
Transport of molecules
between the cytoplasm and
the nucleus
Chromatin DNA Replication and transcription
Nuclear matrix
Replication, DNA repair and
transcriptional process
Nucleolus
Synthesis of rRNA and
ribosomes
Chromosomes
• The chromosomes direct the activities of cells like
a mall office director who works in the office and
directs all the activities of the shopping mall.
• “Director of the Cell”
Golgi Apparatus
Discovered in 1898 by
Camillo Golgi
Found in both plant and
animal cells
Looks like a flattened
stack of membranes (or
pancakes!)
Processes and packages
molecules, like lipids
and proteins, that were
made by the cell
Ribosomes
Found in both plant
and animal cells
Can be attached to the
Endoplasmic Membrane
or floating free in the
cytoplasm
Ribosomes:-
• Produces proteins
• The smallest organelles
• It’s like the brick yard
that supplies a city with
what it’s made of!
Endoplasmic Reticulum
Found in both plant and
animal cells
• Network of tubes
• Transports materials
throughout the cell
Endoplasmic Reticulum
Two types
– Smooth (no ribosomes)
– Rough (covered with
ribosomes)
• It’s like a city’s highway
system!
‘The Cell’s Delivery System’
Biomolecules Definition
• Biomolecules are molecules that occur
naturally in living organisms.
• Biomolecules include macromolecules
like proteins, carbohydrates, lipids and
nucleic acids.
• It also includes small molecules like
primary and secondary metabolites and
natural products.
• Biomolecules consists mainly of carbon
and hydrogen with nitrogen, oxygen,
sulphur, and phosphorus.
• Biomolecules are very large molecules
of many atoms, that are covalently
bound together.
Classes of Biomolecules
There are four major classes of biomolecules:
• Carbohydrates
• Lipids
• Proteins
• Nucleic acids
Carbohydrates
• Carbohydrates are often known as
sugars, they are the 'staff of life' for most
organisms.
• They are the most abundant class of
biomolecules in nature, based on mass.
• Carbohydrates are also known as
saccharides, in Greek sakcharon mean
sugar or sweetness.
• Carbohydrates consist of the elements
carbon (C), hydrogen (H) and oxygen (O) with
a ratio of hydrogen twice that of carbon and
oxygen. General formula of carbohydrate
is Cn H2n On
• In their basic form, carbohydrates are
simple sugars or monosaccharides.
• These simple sugars can combine with each
other to form more complex carbohydrates.
• The combination of two simple sugars is
a disaccharide.
• Carbohydrates consisting of two to ten
simple sugars are called oligosaccharides,
and those with a larger numbers are
called polysaccharides.
Sugars
• Sugars are white crystalline carbohydrates
that are soluble in water and generally have a
sweet taste.
Classification of Carbohydrates
• The carbohydrates are divided into three
major classes depending upon whether or
not they undergo hydrolysis, and if they do,
on the number of products formed.
Monosaccharides
• The monosaccharides are polyhydroxy
aldehydes or polyhydroxy ketones which
cannot be decomposed by hydrolysis to give
simpler carbohydrates.
• Examples are glucose and fructose, both of
which have molecular formula, C6H12O6.
• Many saccharide structures differ only in the
orientation of the hydroxyl groups (-OH).
• This slight structural difference makes a big
difference in the biochemical properties, and
in the physical properties such as melting
point .
• A chain-form monosaccharide that has a
carbonyl group (C=O) on an end carbon
forming an aldehyde group (-CHO) is
classified as an aldose. When the carbonyl
group is on an inner atom forming a ketone,
it is classified as a ketose.
• On the basis of number of carbon
atoms monosaccharide are further classified
into following small units:
(i) Trioses (C3 H6 O3) – It contain 3 carbon
molecule. Examples are: Glyceraldehyde and
and Dihydroxy acetone.
Glyceraldehyde
(ii) Tetroses(C4 H8 O4) – It contain 4 carbon
molecules. Examples are: Erythrose,
Erythrulose.
D-Erythrose D-Threose D-Erythrulose
(iii) Pentoses (C5 H10 O5) – It contain 5 carbon
molecules. Examples are: Ribose, Ribulose,
Arbinose,Xylulose, Deoxyribose.
D-Ribose D-Arabinose D-Xylose D-Lyxose
• The ring form of ribose is a component of
ribonucleic acid (RNA).
• Deoxyribose, which is missing an oxygen at
position 2, is a component of
deoxyribonucleic acid (DNA)
• In nucleic acids, the hydroxyl group attached
to carbon number 1 is replaced with
nucleotide bases.
Ribose Deoxyribose
(iv) Hexoses(C6H12O6) – It contain 6 carbon
molecules. Examples are: Glucose, Mannose,
Fructose, Galactose etc…
D-Glucose D-Mannose D-Galactose
• Structures that have opposite configurations
of a hydroxyl group at only one position, such
as glucose and mannose, are called epimers.
• Glucose, also called dextrose, is the most
widely distributed sugar in the plant and
animal kingdoms and it is the sugar present
in blood as "blood sugar".
• Fructose, also called levulose or "fruit sugar",
is shown here in the chain and ring
forms. Galactose is a constituent of agar-agar.
It is also called brain sugar.
• Fructose and glucose are the main
carbohydrate constituents of honey.
D-Fructose
Fructose
(v) Heptoses (C7 H14 O7) – It contain 7 carbon
molecules. Examples are: Sedoheptulose.
Sedoheptulose has the same structure as
fructose, but it has one extra carbon.
Sedoheptulose is found in carrots.
D-Sedoheptulose
• Many simple sugars can exist in a chain form
or a ring form, as illustrated by the hexoses
above.
• The ring form is favored in aqueous solutions,
and the mechanism of ring formation is similar
for most sugars.
• The rearrangement
produces alpha glucose when the hydroxyl
group is on the opposite side of the -
CH2OH group, or beta glucose when the
hydroxyl group is on the same side as the -
CH2OH group.
α-D-Glucose β-D-Glucose
• Monosaccharides forming a five-sided ring,
like ribose, are called furanoses. Those
forming six-sided rings, like glucose, are
called pyranoses.
Furanose Pyranose
Oligosaccharides
• These sugars are formed by linking of 2-10
units of monosaccharides.
• In Oligosaccharides ,aldehyde or ketone
group of one monosaccharide are linked
with alcoholic group of another
monosaccharide to form Glycosidic bond
(C-O-C).
• The most abundant oligosaccharides are
disaccharides, formed by two
monosaccharides, and especially in the
human diet the most important are sucrose
(common table sugar), lactose and maltose.
(i) Disaccharides:
• Carbohydrates which upon hydrolysis give
two molecules of the same or different
monosaccharides are called disaccharides.
Three particular disaccharides are: Sucrose,
Maltose & Lactose.
(a) Sucrose: Also called saccharose, is ordinary
table sugar refined from sugar cane or sugar
beets. When Sucrose is hydrolyzed, it yields
one unit of glucose and one unit of fructose.
Sucrose
(b) Maltose (also known as malt sugar): It
occurs in the body as an intermediate
product of starch digestion. When maltose is
hydrolyzed, it yields two molecules of
glucose.
Maltose
(c) Lactose ( also known as milk sugar): This
disaccharide is found only in milk. When
lactose is hydrolyzed it yields one unit of
glucose and one unit of galactose.
Lactose
(ii) Trisaccharides:
(a) Raffinose: Also called melitose, is a
trisaccharide that is widely found in legumes
and vegetables, including beans, peas,
cabbage etc..
• It consists of galactose connected to sucrose
via a 1α→6 glycosidic linkage.
• Humans cannot digest saccharides with this
linkage and the saccharides are fermented in
the large intestine by gas-producing bacteria.
Raffinose
Polysaccharides
• Polysaccharide, also called glycan, the form
in which most natural carbohydrates occur.
• Polysaccharides may have a molecular
structure that is either branched or linear.
• Linear compounds such as cellulose often
pack together to form a rigid structure;
branched forms (e.g., gum arabic) generally
are soluble in water and make pastes.
• Polysaccharides composed of many
molecules of one sugar or one sugar
derivative are called homopolysaccharides
(homoglycans).
• Homopolysaccharides composed
of glucose include glycogen and starch, the
storage carbohydrates of animals and plants
respectively; and cellulose, the important
structural component of most plants.
• Polysaccharides consisting of molecules of
more than one sugar or sugar derivative are
called heteropolysaccharides
(heteroglycans). Most contain only two
different units and are associated with
proteins; like Peptidoglycan, proteoglycans
etc..
• Hetropolysaccharides provide extracellular
support for organisms of all kingdoms.
• The polysaccharides described below play
important roles in nutrition, biology, or food
preparation.
Types of polysaccharides:
(i) Starch: Starch is the major form of stored
carbohydrate in plants. Starch is composed of
a mixture of two substances: amylose, an
essentially linear polysaccharide,
and amylopectin, a highly branched
polysaccharide.
• Both forms of starch are polymers of α-D-
Glucose. Natural starches contain 10-20%
amylose and 80-90% amylopectin.
• Amylose forms a colloidal dispersion in hot
water (which helps to thicken gravies)
whereas amylopectin is completely insoluble.
a) Amylose molecules consist typically of 200 to
20,000 glucose units which form a helix as a
result of the bond angles between the glucose
units.
Amylose
b) Amylopectin differs from amylose in being
highly branched.
Short side chains of about 30 glucose units
are attached with 1α→6 linkages
approximately every twenty to thirty glucose
units along the chain. Amylopectin molecules
may contain up to two million glucose units.
Examples of starch are: Dextrins, Syrups, High
fructose corn syrup(HFCS), Polydextrose etc..
(ii) Glycogen: Glucose is stored as glycogen in
animal tissues by the process of glycogenesis.
 Glycogen is a polymer of α-D-Glucose
identical to amylopectin, but the branches in
glycogen tend to be shorter (about 13 glucose
units)
Glucose chains are organized globularly like
branches of a tree originating from a pair of
molecules of glycogenin, a protein with a
molecular weight of 38,000 that acts as a
primer at the core of the structure.
Glycogen is easily converted back to glucose
to provide energy.
(iii) Dextran: Dextran is a polysaccharide similar
to amylopectin, but the main chains are
formed by 1α→6 glycosidic linkages and the
side branches are attached by 1α→3 or 1α→4
linkages.
 Dextran is an oral bacterial product that
adheres to the teeth, creating a film called
plaque.
It is also used commercially as food additives..
Dextran
(iv) Cellulose: Cellulose is a polymer of β-D-
Glucose, which in contrast to starch, is
oriented with -CH2OH groups alternating
above and below the plane of the cellulose
molecule thus producing long, unbranched
chains.
The absence of side chains allows cellulose
molecules to lie close together and form rigid
structures.
Cellulose is the major structural material of
plants.
Wood is largely cellulose, and cotton is almost
pure cellulose.
Cellulose can be hydrolyzed to its constituent
glucose units by microorganisms that inhabit
the digestive tract of termites and ruminants.
Cellulose
(v) Hemicellulose:
 The term "hemicellulose" is applied to the
polysaccharide components of plant cell walls
other than cellulose, or to polysaccharides in
plant cell walls which are extractable by
dilute alkaline solutions.
Hemicelluloses comprise almost one-third of
the carbohydrates in woody plant tissue.
The chemical structure of hemicelluloses
consists of long chains of a variety of
pentoses, hexoses.
Hemicelluloses may be found in fruit, plant
stems & grain. Although hemicelluloses are
not digestible, they can be fermented by
yeasts and bacteria.
• The polysaccharides yielding pentoses on
hydrolysis are called pentosans. Xylan is an
example of a pentosan consisting of D-xylose
units with 1β→4 linkages.
Xylan
(vi) Chitin:
 Chitin is an unbranched polymer of N-Acetyl-
D-glucosamine.
It is found in fungi and is the principal
component of arthropod and lower animal
exoskeletons, e.g., insect, crabs etc..
It may be regarded as a derivative of cellulose,
in which the hydroxyl groups of the second
carbon of each glucose unit have been replaced
with acetamido (-NH(C=O)CH3) groups.
Chitin
(vii) Pectin: Pectin is a polysaccharide that
acts as a cementing material in the cell walls
of all plant tissues. Pectin is the methylated
ester of polygalacturonic acid, which consists
of chains of 300 to 1000 galacturonic acid
units joined with 1α→4 linkages.
Pectin is an important ingredient of fruit
preserves, jellies, and jams.
Pectin is a polymer of α-Galacturonic acid
with a variable number of methyl ester
(-COOCH3) groups.
Carbohydrates have six major functions within the
body:
• Providing energy and regulation of blood glucose
• Sparing the use of proteins for energy
• Breakdown of fatty acids and preventing ketosis
• Biological recognition processes i.e. they are
essential for cells to communicate with each
other.
• Flavor and Sweeteners
• They have the potential to reduce the risks of
many chronic diseases.
Lipids: Fats & Oils
LIPIDS
• Lipids are naturally occurring hydrophobic
molecules.
• They are heterogeneous group of compounds
related to fatty acids. They include fats, oils,
waxes, phospholipids, etc.
• They make up about 70% of the dry weight of
the nervous system. Lipids are crucial for the
healthy functioning of the nerve cells.
• Lipids are greasy or oily organic substances;
lipids are sparingly soluble in water and
are soluble in organic solvents like chloroform,
ether and benzene.
• Lipids are important constituent of of the diet
because they are a source of high energy value.
• Lipids combined with proteins are important
constituents of the cell membranes and
mitochondria of the cell. Lipids are not generally
macromolecules.
Classification of Lipids
• They may be classified based on their
physical properties at room temperature
(solid or liquid, respectively fats and oils), on
polarity, or on their essentiality for humans,
but the preferable classification is based on
their structure.
Types of Lipid
1.Triglycerides
[Fats & Oils]
1. Waxes
2. Phospholipids
3. Steroids
4. Glycolipids
5. Lipoproteins
6. Terpenes
Based on structure, they can be classified in
three major groups.
1. Simple Lipids or Homolipids
• These are esters of fatty acids with various
alcohols.
(A)Fats and Oils: Esters of fatty acids with
glycerol. The difference between fat and oil is
only physical. Thus, oil is a liquid while fat is a
solid at room temperature.
These triglycerides (or triacylglycerols) are found
in both plants and animals, and compose one of
the major food groups of our diet.
Fats & Oils
• the commonest lipids in nature
• the constituents of fats are:-
fatty acids
(alkanoic acids)
glycerol
(propane 1-2-3 triol)
(B)Waxes: Esters of fatty acids(usually long
chain)with alcohols other than glycerol.
These alcohols may be aliphatic or alicyclic.
Cetyl alcohol [CH3(CH2)15OH] is most
commonly found in waxes.
The name cetyl derives from the whale oil
(Latin: cetus) from which it was first isolated.
Example: Beeswax(insect wax), Carnauba wax
(important plant wax; also a complex mixture
; hardest known wax)
Fatty acids
- general formula: R.COOH
- most have an even number
of C - most commonly 16-18
C16H32O2
R
- fatty acids may be:
 saturated or
unsaturated
Saturated fatty acid
[Single bonds only]
Unsaturated fatty acid
[Double bonds]
Stearic acid, C17H35COOH –
Saturated fatty acid Oleic acid, C17H33COOH –
Unsaturated fatty acid
The more double bonds present,
the more bent the molecule is
Properties of Saturated
Fatty Acids
• Contain only single C–C bonds
• Closely packed
• Strong attractions between chains
• High melting points
• Solids at room temperature
201
Properties of Unsaturated
Fatty Acids
• Contain one or more double C=C bonds
• Nonlinear chains do not allow molecules
to pack closely
• Few interactions between chains
• Low melting points
• Liquids at room temperature
202
Fatty Acids
• The Length of the Carbon Chain
–long-chain, medium-chain, short-chain
• The Degree of Unsaturation
–saturated, unsaturated,
monounsaturated, polyunsaturated
• The Location of Double Bonds
–omega-3 fatty acid, omega-6 fatty acid
Monounsaturated Fatty Acid
(MUFA)
One carbon-carbon double bond
Polyunsaturated Fatty Acid
(PUFA)
More than one carbon-carbon double bond
Location of Double Bonds
• PUFA are identified by position of the double
bond nearest the methyl end (CH3) of the
carbon chain; this is described as a omega
number;
• If PUFA has first double bond 3 carbons away
from the methyl end=omega 3 FA
• 6 carbons from methyl end=omega 6 FA
Cis and Trans Fatty Acids
• Because of the presence of doubles bond in
aliphatic hydrocarbon chain of unsaturated
fatty acids, they can exhibit geometrical
isomerism also called as cis-trans
isomerization.
• Naturally occurring fatty acid exhibit cis-
configuration which can be modified to
artificial configuration known as trans.
• In cis-form the hydrogen atoms of double
bonded carbon atom oriented on same side,
however in trans form they oriented in
opposite direction.
• The differences in geometry of trans and cis-
unsaturated fatty acids play an important role
in biological processes.
• Cis and trans forms of fatty acids show
different physical and chemical properties
just like other organic geometrical isomers.
• Trans isomers show high melting points due
to closely packed structure compare to cis
isomers.
• The configuration of unsaturated fatty acids
not only affects their physical properties but
also their health implications.
Some other differences between cis and
trans-fatty acids are as follows.
2. Compound Lipids or
Heterolipids
• Esters of fatty acids containing groups in
addition to an alcohol and a fatty acid.
(a)Phospholipids: Lipids containing, in
addition to fatty acids and an alcohol, a
phosphoric acid residue.
• They frequently have nitrogen containing
bases and other substituent's, e.g., in
glycerophospholipids the alcohol is glycerol
and in sphingophospholipids the alcohol is
sphingosine.
(b) Glycolipids (glycosphingolipids): Lipids
containing a fatty acid, sphingosine, and
carbohydrate.
(c) Other complex lipids: Lipids such as
sulfolipids and aminolipids. Lipoproteins may
also be placed in this category.
3. Precursor and derived lipids:
• This group includes:
–Fatty Acids.
–Glycerol.
–Cholesterol.
–Steroid hormones.
–Fatty aldehydes.
–Fat soluble vitamins [ A D E K].
–Some other alcohols.
215
Derived lipids
• Derived lipids are the substances derived from
simple and compound lipids by hydrolysis.
• These includes fatty acids, alcohols,
monoglycerides and diglycerides, steroids,
terpenes, carotenoids.
• The most common derived lipids are steroids,
terpenes and carotenoids.
• Steroids do not contain fatty acids, they are
nonsaponifiable, and are not hydrolyzed on
heating.
• They are widely distributed in animals, where
they are associated with physiological
processes.
• They performs various functions such as
hormones and contributes to the structure of
cell membranes.
Steroids
• Steroids are: Lipids containing the steroid
nucleus, which is a fused structure of four
rings.
• Found in cholesterol, bile salts, hormones,
and vitamin D.
a. Cholesterol
• The most abundant steroid in the body.
•Contains 27 carbon atoms.
• At C3 there is a –OH group; so it is an
alcohol. Composed of the steroid nucleus with
methyl groups, an alkyl chain, and a hydroxyl
group attached.
b. Bile Salts
• Are synthesized from cholesterol and stored
in the gall bladder.
• Emulsify fats and oils to give a greater surface
area for lipid digesting enzymes.
Terpenes
• In majority are found in plants. Example:
natural rubber. Gernoil, etc.
• Are volatile organic compounds which are
odoriferous constituents of essential oils.
• They contain carbon, hydrogen and oxygen
and are not aromatic in character.
Carotenoids
• Carotenoids are tetraterpenes. They are
widely distributed in both plants and animals.
• They are exclusively of plant origin.
• Due to the presence of many conjugated
double bonds, they are colored red or yellow.
Example: Lycopreene, carotenes,
Xanthophylls.
Function of Lipids
Lipids perform several biological functions:
• Lipids are storage compounds, triglycerides
serve as reserve energy of the body.
• Lipids are important component of cell
membranes structure in eukaryotic cells.
• Lipids regulate membrane permeability.
• They serve as source for fat soluble vitamins
like A, D, E, K.
• As lipids are small molecules and are
insoluble in water, they act as signalling
molecules.
• Cholesterol maintains fluidity of membranes
by interacting with lipid complexes.
• Layers of fat in the subcutaneous layer,
provides insulation and protection from cold.
Body temperature maintenance is done by
brown fat.
Summary
 Lipids
It’s sub types: Classification
Fatty Acids
Types of fatty acids
Compound and derived lipids
Functions of lipids
What is a Protein?
The word protein came from a Greek word “Proteios”
Proteins are like long necklaces with differently
shaped beads. Each "bead" is a small molecule
called an amino acid.
Compounds composed of carbon, hydrogen, oxygen, and
nitrogen and arranged as strands of amino acids
• Proteins are a class of most important
compounds that are found in living
organisms.
• Proteins are the main constituents of our
body such as muscles, skin, hair and nails.
• Protein carry all vital life processes in the
human system.
• Proteins are a vast class of substances of
almost unbelievable diversity in structure
and function.
What is Amino Acid?
• Amino acids are derivatives of carboxylic acids
formed by substitution of -hydrogen for amino
functional group
What do Amino Acids Do?
Amino acids are essential to life, have a role in
metabolism, and are important in nutrition.
They form short polymer chains called peptides, as
well as longer chains that are called polypeptides
or proteins.
About 75 percent of the human body is made up of
chains of amino acids, which is why they are so
vital to how your system functions.
All the chemical reactions that occur in the body
depend on amino acids and the proteins they
build.
Amino Acids
• Amino Acids are the building units of proteins.
Proteins are polymers of amino acids linked
together by what is called “ Peptide bond”.
• There are about 300 amino acids occur in
nature. Only 20 of them occur in proteins.
• Each amino acid has 4 different groups
attached to α- carbon ( which is C-atom next
to COOH). These 4 groups are : amino group,
COOH gp, Hydrogen atom and side Chain (R)
R
• At physiological PH (7.4), -COOH gp is
dissociated forming a negatively charged
carboxylate ion (COO-) and amino gp is
protonated forming positively charged ion
(NH3+) forming Zwitter ion
• Amino acid structures differ at the side chain (R-
groups).
• Abbreviations: three or one letter codes
• Amino acids (except glycine) have chiral centers:
• There are 20 commonly occurring amino acids that
make up proteins, and the order of amino acids in
proteins determines its structure and biological
function.
Classification of amino acids
• Amino acids are classified into different ways
based on polarity, structure, nutritional
requirement, metabolic fate, etc.
• Generally used classification is based on
polarity.
• Amino acid polarity chart shows the polarity
of amino acids.
Classification on polarity basis
Based on polarity, amino acids are classified
into four groups as follows,
• Non-polar amino acids.
• Polar amino acids with no charge.
• Polar amino acids with positive charge.
• Polar amino acids with negative charge.
Classification of Proteins
Proteins ate divided into three main classes :
1. Simple proteins
2. Conjugated proteins
3. Derived proteins
Classification of Proteins
Simple proteins
• The simple proteins are those which are made
of amino acid units only, joined by peptide
bond.
• Upon hydrolysis they yield mixture of amino
acids or their derivatives. They include the
following groups:-
(a) Albumins:
These are water soluble-proteins found in all
body cells and also in the blood stream.
Examples are: lacto albumin found in milk ;
serum albumin found in blood and egg
albumin found in egg.
(b) Globulins:
These are insoluble in water but are soluble in
dilute salt solutions of strong acids and bases.
Examples of globulins are lactoglobulin found
in milk and ovoglobulin in egg yolk.
(c) Glutelins:
These are soluble in dilute acids and alkalis.
The protein glutenin of wheat and oryzenin
of rice is an example. They occur only in plant
material.
(d) Histones:
These are water soluble proteins in which
basic amino acids predominates. They are rich
in arginine or lysine. In eukaryotes the DNA of
the chromosomes is associated with histones
to form nucleoproteins.
(e) Protamines:
 These are water soluble basic polypeptides
with a low molecular weight (about 4,000
Daltons).
Protamines are found bound to DNA in
spermatozoa of some fishes. Examples of
protamines are salmine (in salmon) and
sturine (in sturgeons)
Conjugated proteins
• These consist of simple proteins in
combination with some non-protein
component.
• The non-protein groups are called prosthetic
groups. Conjugated protein includes the
following group:-
(a) Nucleoproteins:
(Protein + nucleic acid). Nucleoproteins are
proteins in combination with nucleic acids.
Examples are: Nucleohistone.
(d) Chromoproteins:
These are proteins in combination with a
prosthetic group that is a pigment. Examples
are the respiratory pigments hemoglobin.
(c) Phosphoproteins (Protein+phosphate):
Phosphoproteins are proteins in combination
with a phosphoric acid residue as a prosthetic
group.
Examples of phosphoproteins are casein of milk
and vitellin in egg yolk.
(e) Lipoproteins:
These are proteins conjugated with lipids. There
are different types of lipoproteins, high density
lipoproteins (HDL), low density
lipoproteins(LDL); Very low density
lipoprotein(VLDL).
(f) Metalloproteins:
These are proteins conjugated to metal ion
(s). Example : The heme protein, which
contain iron are classed as chromoproteins
also are metalloproteins.
Derived proteins
 They are substances resulting from the
decomposition of simple and conjugated
proteins as in peptones, peptides.
Derived proteins are subdivided into primary
derived proteins and secondary derived
proteins.
Derivatives of proteins due to action of
heat, enzymes, or chemical reagents.
a) Primary Derived
b) Secondary Derived
Primary derived proteins –
• Proteans,
• Metaproteins and
• Coagulated proteins. Example: cooked egg
albumin etc..
Secondary derived proteins –
• Proteoses,
• Peptones and
• Polypeptides.
STRUCTURE OF
PROTEINS
Four different levels of structure –
Primary,
Secondary,
Tertiary and
Quaternary
PRIMARY STRUCTURE
Secondary Structure
Tertiary & Quaternary
Structure
Structure
Protein Functions
Antibodies
Contractile Proteins
Enzymes
Hormonal Proteins
Transport Proteins
Storage Proteins
Structural Proteins
It’s Composition
DNA
RNA
Composition of DNA
• A pentose sugar – Deoxy ribose sugar
• Nucleotides – A,T,G,C
• A phosphate
Pentose sugar in DNA
• Deoxyribose sugar
– 4 C atoms and oxygen molecule forms the ring
– 5th C atom is outside the, part of CH2 group
– 3 OH groups at positions 1,3,5
Nitrogen Bases
• There are four nitrogen bases making up four
different nucleotides.
Adenine
Guanine
Thymine
Cytosine
Pyrimidines
Purines
A
C
G
T
N base
Nucleic Acid
Composition
phosphate
nucleotide
N base
PO4
SugarSugar
PO4
N base
The numbers are
the positions of
the carbons on
the sugar.
(the 3’ end)
5
4
3 2
1
(the 5’ end)
sugar
nitrogen base
DeoxyriboNucleic Acid
Nucleosides & Nucleotides
• Nucleotide = a nitrogenous (nitrogen-
containing) base + a pentose + a phosphate
• Nucleoside = a nitrogenous (nitrogen-
containing) base + a pentose
A molecule of
DNA is formed by
millions of
nucleotides
joined together in
a long chain
PO4
PO4
PO4
PO4
sugar-phosphate
backbone
+ bases
Joined nucleotides
PO4
PO4
PO4
PO4
PO4
PO4
PO4
PO4
PO4
PO4
PO4
PO4
PO4
PO4
PO4
PO4
Double stranded DNA
The bases always pair up in the same way
Adenine forms a bond with Thymine
And cytosine bonds with guanine
Adenine Thymine
Cytosine Guanine
The paired strands are coiled into a spiral
called
A DOUBLE HELIX
sugar-phosphate
chain
Bases
Formation of
Phosphodiester
bonds to make a
polynucleotide
strand
Structure of DNA:
Watson & Crick model
Erwin Chargaff
A A
A A
A
A
A
T
T
T
T T
T
T
C
C
C G G
G
The Properties of DNA
Types of DNA
DNA as a genetic
material
Is the Genetic Material
Protein or DNA
Direct evidences come from :
• Frederick Griffith’s (1928) experiment.
• Hershey and Chase (1952 ) experiment.
Frederick Griffith’s (1928)
experiment.
STEPS IN THE EXPERIMENT
1 LIVE
SIII
2 LIVE
RII
3 H K S III 4 H K S III &
LIVE RII
Strains of Streptococcus pneumoniae injected to mice
Griffith’s
Experiment
RII SIII
Transformation
takes place in
step 4 gives
clue for DNA as
“genetic
material”
1
2
3
4
Hershey & Chase
Experiment
(1952)
Life Cycle of
T-2 Phage
Phage is made of
DNA and protein
coat
Only DNA enters
in the Bacterial
cell and protein
coat is left out
side
288
Events which take place in
life cycle of bacteriophage
HERSHEY & CHASE
CONCLUSION
Summary of Hershey &
Chase (1952 ) experiment
End of Presentation
RNA STRUCTURE AND
FUNCTIONS
What we will be
discussing?
RNA
Introduction
Structure
Different types & functions
Conclusion
Structure of RNA
Ribonucleic acid
THE NUCLEOTIDE: RNA
OH
O=P-O-5CH2 BASE
OH O
4C 1C
H H H H
3C 2C
OH 0H
Adenine
Guanine
Cytosine
Uracil
Synthesis
Types of RNA
Messenger RNA (mRNA)
carries information from
DNA to the ribosome
Transfer RNA (tRNA)
involved in the process of translation
Ribosomal RNA (rRNA)
RNA Types
Messenger
RNA (mRNA)
Comprises
only 5% of
the RNA in
the cell
Ribosomal RNA (rRNA)
Transfer RNA (tRNA)
Functions of different RNA
RNA V/S DNA
Differences between RNA and
DNA
S.No. RNA DNA
1) Single stranded mainly except
when self complementary
sequences are there it forms a
double stranded structure (Hair
pin structure)
Double stranded (Except for
certain viral DNA s which are
single stranded)
2) Ribose is the main sugar The sugar moiety is deoxy
ribose
3) Pyrimidine components differ.
Thymine is never found(Except
tRNA)
Thymine is always there but
uracil is never found
4) Being single stranded structure-
It does not follow Chargaff’s rule
It does follow Chargaff's rule.
The total purine content in a
double stranded DNA is always
equal to pyrimidine content.
Differences between RNA and DNA
S.No. RNA DNA
5) RNA can be easily destroyed by
alkalies to cyclic diesters of mono
nucleotides.
DNA resists alkali action due to
the absence of OH group at 2’
position
6) RNA is a relatively a labile
molecule, undergoes easy and
spontaneous degradation
DNA is a stable molecule. The
spontaneous degradation is very
slow. The genetic information
can be stored for years together
without any change.
7) Mainly cytoplasmic, but also
present in nucleus (primary
transcript and small nuclear RNA)
Mainly found in nucleus, extra
nuclear DNA is found in
mitochondria, and plasmids etc
8) The base content varies from 100-
5000. The size is variable.
Millions of base pairs are there
depending upon the organism
S.No. RNA DNA
9) There are various types of RNA –
mRNA, r RNA, t RNA. These RNAs
perform different and specific
functions.
DNA is always of one type and
performs the function of
storage and transfer of genetic
information.
10) No variable physiological forms
of RNA are found. The different
types of RNA do not change their
forms
There are variable forms of
DNA (A, B and Z)
11) RNA is synthesized from DNA, it
can not form DNA(except by the
action of reverse transcriptase). It
can not duplicate (except in
certain viruses where it is a
genomic material )
DNA can form DNA by
replication, it can also form
RNA by transcription.
12) Many copies of RNA are present
per cell
Single copy of DNA is present
per cell.
• Organic (carbon-containing) compounds that
are essential in small amounts for body
processes
• Do not provide energy
• Enable the body to use the energy provided
by fats, carbohydrates, and proteins
• Mega doses can be toxic.
Classification of Vitamins
Vitamin A
Alternative Names:
Retinol; Retinal; Retinoic acid; Carotenoids
• Is a fat-soluble vitamin.
• Preformed vitamin A is found in animal
products .
• Pro-vitamin A is found in plant-based foods
Vitamin A (and carotenoids)
• Functions:
– Normal vision
– Protects from
infections
– Regulates
immune
system
– Antioxidant
(carotenoids)
• Food sources:
– Liver
– Fish oil
– Eggs
– Fortified milk or
other foods
– Red, yellow, orange,
and dark green
veggies
(carotenoids)
Excess
 Birth defects, hair
loss, dry skin,
headaches, nausea,
 dry mucous
membranes, liver
damage, and bone
and joint pain
Deficit
 Night blindness,
 dry, rough skin,
 increased
susceptibility to
infections
Vitamin D
Alternative Name: Calciferol
Regulation of Calcium metabolism
Vitamin D (the sunshine
vitamin)
Functions:
–Promotes absorption
of calcium and
phosphorus
–Helps deposit those in
bones/teeth
–Regulates cell growth
–Plays role in immunity
Sources:
– Sunlight (10 – 15
mins 2x a week)
– Salmon with bones
– Milk
– Orange juice
(fortified)
– Fortified cereals
Excess
 Deposits of calcium
and phosphorus in
soft tissues, kidney,
and heart damage.
Deficit
 Poor bone and tooth
formation, rickets which
causes malformed
bones and pain in
infants
 Osteomalacia
(softening of bones)
 Osteoporosis (brittle,
porous bones)
VITAMIN E
Alternative Name: Tocopherol
Functions:
 Antioxidant
Enhances immune system
Retards spoilage of commercial foods
Sources of Vitamin E
• Vegetable oils: corn,
soybean, and
products made from
them.
• Wheat and green
leafy vegetables
Excess
 Relatively
nontoxic, fat-
soluble vitamin
 Excess stored in
adipose tissue
 Avoid long-term
mega doses.
Deficit
 Serious
neurological
defects can occur
from mal
absorption.
Vitamin K
Alternative Name: Phylloquinone
 Made up of several compounds essential for
blood clotting.
Vitamin K is destroyed by light and alkalis.
Functions of Vitamin K
Formation of prothrombin for clotting of blood
Sources of Vitamin K
• Green leafy vegetables such as broccoli,
cabbage, spinach
• Bacteria in small intestine synthesizes some
vitamin K, but must be supplemented by
dietary sources.
Excess
 Anemia can result
from excessive
amounts of
synthetic vitamin K.
Deficit
 Defective blood
coagulation, which
increases clotting
time and makes
client prone to
hemorrhage.
Water-Soluble Vitamins
• Vitamin B complex and C
• Dissolve in water
• Easily destroyed by air, light, and cooking
Vitamin B1
Alternative Name: Thiamin
Function:
 Used in metabolism of
carbohydrates for energy.
muscle and nerve function,
and hydrochloric acid
production in the stomach
Sources of Vitamin B1
• Whole grains,
• Rice,
• Pasta,
• Fortified cereals,
• Meat and pork.
Deficiency
Rare- Beriberi
Loss of muscle function,
Nerve damage,
Mental confusion
Vitamin B2
Alternative Name: Riboflavin
Function:
Helps in energy production,
Making niacin( Vit. B3),
Red blood cell formation & human growth.
Sources of Vitamin B2
• Dairy,
• Eggs,
• Green leafy vegetables,
• Nuts, meat,
• Legumes, and
• Enriched flour
Deficiency
Uncommon-
anemia,
mouth sores,
sore throat,
swelled mucous membranes&
 skin disorders.
Vitamin B3
Alternative Name: Niacin
Function:
Used in metabolism, to produce
hormones, enzyme & nerve function &
reducing cholesterol
Sources of Vitamin B3
• Pork,
• Fish, beef,
• Peanut butter,
• Legumes,
• Enriched and fortified grains
Deficiency
Pellagra is characterized by the 4 D’s:
Dermatitis,
Diarrhea,
Dementia & Death
Vitamin B5
Alternative Name: Pantothenic Acid
Function:
Used to make blood cells, cholesterol,
hormones ,metabolize fat & carbohydrates
Sources of Vitamin B5
• Poultry, fish,
• Cereals,
• Unprocessed foods.
Deficiency
• Very rare- only seen in severe malnutrition.
Symptoms are:
• Headache,
• fatigue,
• burning & numbness of feet
Vitamin B6
Alternative Name: Pyridoxine
Function:
Protein metabolism,
Blood cell formation,
Immune system function, and
Niacin production
Sources of Vitamin B6
• Chicken,
• Pork, fish,
• Grains,
• Nuts & legumes
Deficiency
• Dermatitis
• Fatigue
• Anemia
Vitamin B7
Alternative Name: Biotin
Function:
Used in fatty acid synthesis, also other
functions.
Maintaining a strong immune system &
proper working of the nervous system.
Sources of Vitamin B7
• Generally produced in the intestine, in the
presence of healthy intestinal flora.
• Cereals,
• Pulses & legumes,
• Vegetables, nuts
Deficiency
Pain,
Tiredness,
Lack of appetite,
Muscular weakness,
Vitamin B9
Alternative Name: Folic Acid
Function:
For synthesis of glycine, methionine,
nucleotides etc..
Important for rapidly dividing cells
Sources of Vitamin B9
• Broccoli,
• Citrus Fruits,
• Beans, Peas
• Avocado,
• Spinach
Deficiency
Linked to neural tube defects in fetus,
Inflammation of mouth & tongue, poor
growth, depression & mental confusion,
Megaloblastic anemia
Vitamin B12
Alternative Name: Cyanocobalamin
Function:
B12 is also used in regenerating folate
Helps in the formation of red blood cells
Sources of Vitamin B12
• Meats (beef liver)
• Meat,
• Poultry,
• Eggs,
• Milk and other dairy foods
Deficiency
Sore tongue,
Stomach upset and weight loss
Rapid heartbeat and breathing
Weakness, tiredness
Vitamin C
Alternative Name: Ascorbic Acid
Function:
An antioxidant vitamin,
For healthy teeth, gums and blood vessels;
Improves iron absorption and resistance to
infection
Sources of Vitamin C
• Fresh vegetables & fruits,
• Broccoli,
• Cauliflower, lemon, cabbage, pineapples,
strawberries, citrus fruits.
Deficiency
Sore tongue,
Stomach upset and weight loss
Rapid heartbeat and breathing
Weakness, tiredness
ENZYMES
What Are Enzymes?
• Most enzymes are
Proteins (tertiary
and quaternary
structures)
• Act as Catalyst to
accelerates a
reaction
• Not permanently
changed in the
process
Enzymes
• Are specific for what
they will catalyze
• Are Reusable
• End in –ase
-Sucrase
-Lactase
-Maltase
How do enzymes Work?
Enzymes work by:
weakening bonds
which lowers
activation energy
Enzymes lower the activation energy of a reaction
Final energy state of
products
Initial energy state
of substrates
Activation
energy
of uncatalysed
reactions
Activation energy
of enzyme catalysed
reaction
Progress of reaction (time)
Energylevelsofmolecules
Enzyme-Substrate
Complex
The substance
(reactant) an
enzyme acts on
is the substrate
Enzyme
Substrate Joins
Active Site
• A restricted region of an enzyme
molecule which binds to the substrate.
EnzymeSubstrate
Active Site
Enzymes lower activation energy by forming an
enzyme/substrate complex
Substrate + Enzyme
Enzyme/substrate complex
Enzyme/product complex
Product + Enzyme
Classification of Enzymes
EC 1. Oxidoreductases
EC 2. Transferases
EC 3. Hydrolases
EC 4. Lyases
EC 5. Isomerases
EC 6. Ligases
Theories for Enzyme- Substrate
Binding
Two Theories have been proposed to explain the
interaction of enzyme and substrate
 LOCK & KEY MODEL
INDUCED – FIT THEORY
Lock and Key
Lock-and-key hypothesis assumes the
active site of an enzyme is rigid in its
shape
How ever crystallographic studies indicate proteins are flexible.
380
Induced Fit
• A change in the
shape of an
enzyme’s active
site
• Induced by the
substrate
The Induced-fit hypothesis suggests the active
site is flexible and only assumes its catalytic
conformation after the substrate molecules
bind to the site.
When the product leaves
the enzyme the active site
reverts to its inactive state.
What Affects Enzyme
Activity?
Enzyme activity
How fast an enzyme is working
Rate of Reaction
Rate of Reaction = Amount of
substrate changed (or amount product
formed) in a given period of time.
Enzyme activity
Four Variables
Temperature
pH
Enzyme Concentration
Substrate Concentration
RateofReaction
Temperature
0 20 30 5010 40 60
40oC - denatures
5- 40oC
Increase in Activity
<5oC - inactive
Effect of heat on enzyme activity
If you heat the protein above its optimal
temperature
bonds break
meaning the protein loses it secondary and
tertiary structure
Effect of heat on enzyme activty
Denaturing the protein
ACTIVE SITE CHANGES SHAPE
SO SUBSTRATE NO LONGER FITS
Even if temperature lowered – enzyme can’t regain its
correct shape
RateofReaction
pH
RateofReaction
pH
1 3 42 5 6 7 8 9
RateofReaction
Enzyme Concentration
RateofReaction
Enzyme Concentration
Enzyme Concentration
RateofReaction
Substrate Concentration
RateofReaction
Substrate Concentration
Substrate Concentration
RateofReaction
Substrate Concentration
Substrate Concentration
Active sites full- maximum turnover
Cofactors and Coenzymes
• Inorganic substances (zinc, iron) and vitamins
(respectively) are sometimes need for proper
enzymatic activity.
• Example:
Iron must be present in the quaternary structure -
hemoglobin in order for it to pick up oxygen.
Two examples of Enzyme Inhibitors
a. Competitive inhibitors: are chemicals
that resemble an enzyme’s normal
substrate and compete with it for the
active site.
Enzyme
Competitive inhibitor
Substrate
Inhibitors
b.Noncompetitive inhibitors:
Inhibitors that do not enter the active
site, but bind to another part of the
enzyme causing the enzyme to change its
shape, which in turn alters the active site.
Enzyme
active site
altered
Noncompetitive
Inhibitor
Substrate
Applications of
Enzymes
Enzymes in industry
• There are many uses of enzymes in industry.
Examples of these are:
• Clothes/dishwashing detergents
• Baby food
• Starch(HFCs)
• Glucose(Fructose-Slimming Aid)
• Medical Diagnosis
• Diabetes Control
• Curing Disease
Enzymes in Clothes/Dishwasher
Detergents
• People use biological detergents to remove stains.
• Biological washing powders contain proteases and
lipases.
• These enzymes break down proteins and fats in the
stain.
Advantages
Enzymes give you a
cleaner wash.
Work at lower
temperatures-this
means you use less
electricity.
Disadvantages
If water too hot,
enzymes become
denatured.
Enzymes in baby food
• Proteases are used to make baby food.
• Proteases ‘pre-digest’ some of the protein
in the food.
Advantages
Treating food with protease
enzymes make it easier for a
baby’s digestive system to
cope with it.
Starch(HFCS)
• Carbohydrases are used to convert starch
into sugar (glucose) syrup.
Did You Know?
HFC stands for High
Fructose Corn
Syrup.
Enzymes In Slimming Aids
• The enzyme, isomerase, is used to change
glucose syrup to fructose syrup. Glucose
and fructose contain exactly the same
amount of energy.
Enzymes To Diagnose
Disease
Enzymes To Diagnose and
Control Disease
• A common test for sugar in the urine relies on a
color change on a test strip. The test strip
contains a chemical indicator and an enzyme.
Enzymes to cure disease
If you have a heart attack. An enzyme called
streptokinase will be injected into your blood as
soon as possible.
Introduction
Functions of
Hormones
Characteristics of
Hormones
Mechanism of
Hormones
All hormones in the human body
can be divided into lipid-derived,
amino acid-derived, and peptide
hormones.
Key Points
• Most lipid hormones are steroid hormones, which
are usually ketones or alcohols and are insoluble in
water.
• Steroid hormones (ending in '-ol' or '-one')
include estradiol, testosterone, aldosterone, and
cortisol.
• The amino acid-derived hormones (ending in '-ine')
are derived from tyrosine and tryptophan and
include epinephrine and norepinephrine (produced
by the adrenal medulla).
Key Points
• Amino acid-derived hormones also
include thyroxin (produced by the thyroid gland)
and melatonin (produced by the pineal gland).
• Peptide hormones consist of a polypeptide chain;
they include molecules such as oxytocin (short
polypeptide chain) or growth hormones (proteins).
• Amino acid-derived hormones and protein hormones
are water-soluble and insoluble in lipids.
Plant & Animal
Hormones
Plant Hormones
• AUXIN
• CYTOKININ
• GIBBERELLIN
• ETHYLENE
Animal Hormones
Introduction to Life

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Introduction to Life

  • 1.
  • 2. Biology is the study of life and living organisms, from one-celled creatures to the most complex living organism of all — the human being. Biology includes the study of genes and cells that give living things their special characteristics.
  • 3.
  • 4. All living things share some basic properties. Cellular Organization Reproduction Metabolism (Obtain and Use Energy) Homeostasis Heredity Responsiveness Growth and Development Adapt Through Evolution
  • 5. Unicellular Organisms Entire organism is made up of one single cell Bacteria and protists Smallest unit capable of all life functions 
  • 6. Multicellular Organisms The organism is made up of many cells Cells have specialized functions within the organism
  • 7. Reproduction is the process of producing new organisms of the same type Asexual Reproduction A single parent organism reproducing by itself 
  • 8. Sexual Reproduction Two different parent organisms contribute genetic information Involves the combination of male and female sex cells
  • 9. Living organisms need energy to grow, develop, repair damage, and reproduce 
  • 10. Anabolism The process of building up complex substances from simpler substances  Building up cells and cellular components  Photosynthesis
  • 11. Catabolism The process of breaking down complex substances into simpler substances to release energy  Digestion  Cellular Respiration
  • 12. Metabolism The total of all chemical reactions in an organism  Anabolism + Catabolism = Metabolism 
  • 13. A stable state of conditions in the body that are necessary for life Body temperature Blood volume pH balance (Blood7.34–7.45) Water balance 
  • 14. Genes carry hereditary information Genes are composed of DNA Heredity is the reason children resemble their parents “Mutations change DNA code and can be passed from generation to generation”. 
  • 15. Organisms react to stimuli: Light Temperature Odor Sound Gravity Heat Water Pressure An example is a plant’s leaves and stems growing toward light 
  • 16. Growth means to get bigger in size 
  • 17. Development involves a change in the physical form or physiological make-up of an organism 
  • 18. Adaptation A process that enables organisms to become better suited to their environment  Species obtain adaptations through evolution over great periods of time 
  • 19. An Example of Adaptation Desert plants have succulent waxy leaves and stems to store water and reduce water loss
  • 20. What is classification? Classification is the grouping of living organisms according to similar structures and functions.
  • 21. Aristotle grouped animals according to the way they moved.
  • 22. As living things are constantly being investigated, new attributes are revealed that affect how organisms are placed in a standard classification system.
  • 23. Taxonomy is the branch of biology concerned with the grouping and naming of organisms. Biologists who study this are called taxonomists.
  • 24. People wanted to organize their world so they began grouping, or classifying everything they saw.
  • 25. To help us see relationships, similarities and differences. To help us organize all the organisms we discover . . .
  • 26. To give every species a name based on a standard method so scientists from different countries can talk about the same animal without confusion.
  • 27. Carolus Linnaeus was a Swedish botanist. Developed a 7-level (taxa) classification system based on similarities between organisms. Developed by Carolus Linnaeus. Two-name system: First name is the organism’s genus. Second name is the organism’s species.
  • 28. The first letter of the genus is ALWAYS capitalized. The first letter of the species is NEVER capitalized. Scientific names of organisms are always italicized or underlined
  • 29. 29 • Taxon ( taxa-plural) is a category into which related organisms are placed • There is a hierarchy of groups (taxa) from broadest to most specific • Domain, Kingdom, Phylum, Class, Order, Family, Genus, species copyright cmassengale
  • 31. 31 Hierarchy-Taxonomic Groups • Domain • Kingdom • Phylum (Division – used for plants) • Class • Order • Family • Genus • Species BROADEST TAXON Most Specific copyright cmassengale
  • 33. HISTORY OF CLASSIFICATION ARISTOTLE DIVIDED LIVING THINGS INTO TWO KINGDOMS CAROLLUS LINNAEUS DEVELOPED THE CLASSIFICATION ON SIMILAR PROPERTIES, FOUND BINOMIAL NOMENCLATURE AS A SYSTEM TO GIVE A SCIENTIFIC NAME ROBERT WHITTAKER HE GAVE FIVE KINGDOMS SYSTEM
  • 34. Domains Domains are the broadest taxonomic classification of living organisms The three Domains: Archaea Bacteria Eukarya
  • 35. 35 • Broadest, most inclusive taxon • Three domains • Archaea and Eubacteria are unicellular prokaryotes (no nucleus or membrane- bound organelles) • Eukarya are more complex and have a nucleus and membrane-bound organelles Domains copyright cmassengale
  • 36. Domains are Divided into Kingdoms Archaea----- Archaebacteria Bacteria ------ Eubacteria Eukarya ------- Protist Fungi Plantae Animalia
  • 37. How does it work? There are 6 broad kingdoms Every living thing that we know of fits into one of the six kingdoms Each level gets more specific as fewer organisms fit into any one group
  • 38. 38 ARCHAEA • Probably the 1st cells to evolve • Live in HARSH environments • Found in: – Sewage Treatment Plants – Thermal or Volcanic Vents – Hot Springs or Geysers that are acid – Very salty water (Dead Sea; Great Salt Lake) copyright cmassengale
  • 40. 40 EUBACTERIA • Some may cause DISEASE • Found in ALL HABITATS except harsh ones • Important decomposers for environment • Commercially important in making cottage cheese, yogurt, buttermilk, etc. copyright cmassengale
  • 41. 41 Live in the intestines of animals copyright cmassengale
  • 42. 42 Domain Eukarya is Divided into Kingdoms • Monera (true bacteria (eubacteria) and cyanobacteria (blue-green algae). • Protista (protozoans, algae…) • Fungi (mushrooms, yeasts …) • Plantae (multicellular plants) • Animalia (multicellular animals) copyright cmassengale By: ROBERT WHITTAKER
  • 43. KINGDOM MONERA • Unicellular • Prokaryotic • Cell wall is non cellulosic • Nutrition - autotrophic or heterotrophic •Locomotion – flagella, gliding or non motile. •Reproduction – conjugation, transduction and transformation
  • 45. 45 Protista •Most are unicellular •Some are multicellular •Some are autotrophic, while others are heterotrophic •Aquatic copyright cmassengale
  • 46. 46 Fungi • Multicellular, except yeast • Absorptive heterotrophs (digest food outside their body & then absorb it) • Cell walls made of chitin copyright cmassengale
  • 48. 48 Plantae •Multicellular •Autotrophic •Absorb sunlight to make glucose – Photosynthesis •Cell walls made of cellulose copyright cmassengale
  • 49. Bryophytes Polytricum sp. female gametopytes Polytricum sp. male gametopytes
  • 53. 53 Animalia • Multicellular • Ingestive heterotrophs (consume food & digest it inside their bodies) • Feed on plants or animals copyright cmassengale
  • 56. Organizational Hierarchy of Life Most Complex Least Complex sub-atomic particles atom molecule macromolecule organelle cell tissue organ organ system organism population community ecosystem biosphere protons, neutrons, electrons nitrogen nucleotide DNA nucleus neuron nervous tissue brain nervous system fish school of fish coral reef populations coral reef (living + nonliving) inhabitable regions of earth
  • 57. Biological Levels of Organization
  • 58.
  • 59. Basic Concept of Cell & its Function
  • 60. What are Cells? • What is a cell? • Where do we find cells? Cell: “A cell is a basic unit of structure and function of life. In other words, cells make up living things and carry out activities that keep a living thing alive”.
  • 61. Cells Continued • What makes a cell? • A cell is a living thing. • Cells are able to make more cells like themselves. • Interesting Fact: “New cells can only come from existing cells (cells that are already made)”.
  • 62. • In 1660s there was a man named Robert Hooke. Robert lived in Britain and was a scientist. He was the first person to observe cells. • Robert took a piece bark from an old oak tree and looked at it through a microscope.
  • 63. • The bark looked like it was made up of many small rooms (kind of like a house with many bedrooms). He named the rooms, or structures, he saw under the microscope as cells. Therefore, he Coined the term cell • THIS IS HOW THE WORD CELLS CAME TO BE!!
  • 64.
  • 65. Cell Theory: 1. All living things are composed of cells. 2. Cells are the basic units of structure and function in living things. 3. New cells are produced from existing cells. Schleiden Schwann Virchowwww.nerdscience.com « Omnis cellula e cellula »
  • 66. • Cells are the basic units of organisms –Cells can only be observed under microscope • Two basic types of cells: Animal Cell Plant Cell
  • 67. Plant Cell –Made of cellulose which forms very thin fibres –Strong and rigid –In plant cells only • Cell wall
  • 68. – Protect and support the enclosed substances (protoplasm) – Resist entry of excess water into the cell – Give shape to the cell • Cell wall Plant Cell
  • 69. –A dead layer –Large empty spaces present between cellulose fibres freely permeable • Cell wall Plant Cell
  • 70. –Lies immediately against the cell wall –Made of protein and lipid Selectively permeable • Cell membrane Plant Cell
  • 71. –A living layer –Can control the movement of materials into and out of the cell • Cell membrane Plant Cell
  • 72. –Jelly-like substance enclosed by cell membrane –Provide a medium for chemical reactions to take place • Cytoplasm Plant Cell
  • 73. –Contains organelles and granules : •e.g. chloroplast •e.g. mitochondria • Cytoplasm Plant Cell
  • 74. Organelles  very small size – can only be observed under electron microscope  has specific functions  in cytoplasm
  • 75. –Contains the green pigment chlorophyll •To trap light energy, to make food by photosynthesis Plant Cell • Chloroplast
  • 76. –Contain starch grains (products of photosynthesis) • Chloroplast Plant Cell
  • 77. –Rod shape –For respiration Plant Cell • Mitochondrion ( mitochondria )
  • 78. – Active cells ( eg. sperms, liver cells) have more mitochondria Plant Cell • Mitochondrion ( mitochondria )
  • 79. –Starch granules –Oil droplets –Crystals of insoluble wastes Plant Cell • Non-living granules
  • 80. – large central vacuole – Surrounded by tonoplast – Contains cell sap • a solution of chemicals (sugars, proteins, mineral salts, wastes, pigments) Plant Cell • Vacuole
  • 81. –Control the normal activities of the cell –Bounded by a nuclear membrane –Contains thread-like chromosomes Plant Cell • Nucleus
  • 82. –Each cell has fixed number of chromosomes • Chromosomes carry genes –genes control cell characteristics • Nucleus Plant Cell
  • 83. mitochondrion nucleus glycogen granule cell membrane cytoplasm Animal cell • No cell wall and chloroplast • Stores glycogen granules and oil droplets in the cytoplasm vacuole
  • 84. Different kinds of animal cells white blood cell red blood cell cheek cells sperm nerve cell muscle cell Amoeba Paramecium
  • 85. Similarities between plant cells and animal cells Both have a cell membrane surrounding the cytoplasm Both have a nucleus Both contain mitochondria
  • 86. Differences between plant cells and animal cells Animal cells Plant cells Relatively smaller in size Irregular shape No cell wall Relatively larger in size Regular shape Cell wall present
  • 87. Animal cells Plant cells Vacuole small or absent Glycogen granules as food store Nucleus at the centre Large central vacuole Starch granules as food store Nucleus near cell wall Differences between plant cells and animal cells
  • 88. Structure Animal cells Plant cells cell membrane Yes yes nucleus Yes yes nucleolus yes yes ribosomes yes yes ER yes yes Golgi yes yes centrioles yes no cell wall no yes mitochondria yes yes cholorplasts no yes One big vacuole no yes cytoskeleton yes Yes
  • 89. Cell Type Example Prokaryotic Bacteria Eukaryotic Protists Fungi Plants Animals
  • 90.
  • 91.
  • 92.
  • 93.
  • 94. The distinction between prokaryotes and eukaryotes is considered to be the most important distinction among groups of organisms. Eukaryotic cells contain membrane-bound organelles, such as nucleus, while prokaryotic cells do not. Differences in cellular structure of prokaryotes and eukaryotes include the presence of mitochondria and chloroplasts, the cell wall, and the structure of chromosomalDNA. Prokaryotes were the only form of life on Earth for millions of years until more complicated eukaryotic cells came into being through the process of evolution.
  • 95. • In Greek: –Pro = before –karyotic = nucleus • Cell that do not have a nucleus • Bacteria
  • 96. • In Greek: –Eu = True –Karyotic = nucleus • Cell that have a nucleus
  • 97.
  • 98.
  • 99.
  • 100. In this PowerPoint you will learn the following: • Different cell parts • What function each part has
  • 101. Even if cells are very tiny, they are made up of smaller parts, and the parts do different jobs.
  • 102. Cell organelles are of 2 types.. • Membranous Organelles: 1. Rough Endoplasmic reticulum. 2. Smooth endoplasmic reticulum. 3. Mitochondria. 4. Golgi. 5. Lysosomes.
  • 103. • Non membranous Organelles. 1.Ribosomes. 2.Cytoskeletal structures.
  • 104. As you can see cells have many parts.
  • 105. Cell wall • Only found surrounding plant, fungal and bacterial cells • Its purpose is to shape and protect the cell like the outside wall of a shopping mall, which provides shape and protection for it. • “Supporter and Protector”
  • 106. Cell membrane The cell membrane holds and protects the cell. It controls what substances come into and out of the cell like an entrance you have to pass to get into the shopping mall. “Gate of the Cell”.
  • 107. Surrounds all cells. In a plant cell, it lies beneath the cell wall. In animal cells, it is the outer boundary (made of Cell Membrane cholesterol) Cell membrane Provides cell with – Protection – Control of movement of materials in/out of cell – Support – Maintains condition of cell
  • 108. Function • Regulates the movement of materials from one environment to the other. • Transports raw materials into the cell and waste out of the cell. • Prevents the entry of unwanted matter and the escape of needed materials. • Maintain a steady environment: Homeostasis
  • 109. Cytoplasm • The cytoplasm is the watery, gel-like material in which cell parts move and cell activities take place like the hallways of the mall where people move. • “Area of Movement”
  • 110. Found in both plant and animal cells • Clear, thick, jelly-like Material. • Located beneath cell Membrane. • Supports and protects cell Organelles. • It’s like the sidewalks that are found throughout a city! Cytoplasm
  • 111. Mitochondria • Mitochondria produces most of the energy for the cell, like an electrical system of the shopping mall, which supplies electrical energy. • “Powerhouse of the cell”
  • 112. Found in both plant and animal cells. Looks like a jellybean Breaks down sugar molecules to release usable energy. Has inner foldings (Cristae) that increase the internal surface area. It’s like a city’s power plant!
  • 113. Mitochondria are the only organelles to have their own genetic material. In EM it can be seen that mitochondria are bounded by double unit membrane. These membrane are separated by narrow intramembranous space Inner membrane is four or five times larger than outer membrane.
  • 114. Outer membrane is fairly permeable, inner membrane is highly selective. Interior of the mitochondrian is filled with mitochondrial matrix of slightly higher electron density than the surrounding cytoplasm. Mitochondria are renewed on a continuous basis throughout the cell cycle.
  • 115. The number and size of mitochondria give an indication of the energy requirements. Mitochondria primarily concerned with the chemical process by which energy is made available to the cell in the form of ATP. ATP is often referred to as the energy “currency of cell” Main site of aerobic respiration.
  • 116. • This DNA is inherited maternally. • Mitochondria are also significant participants in many versions of apoptosis, and altered mitochondrial function appears to be associated with various cancerous changes in cells. • In cell hypertrophy- increase in number of mitochondria in cells • In cell atrophy- decrease in no. of mitochondria's in cells. Mitochondrial DNA
  • 117. Chloroplast • Chloroplast is only in plant cells, like the cell wall. It contains chlorophyll, which captures energy from sunlight and uses it to produce food for the cell like the pizza shop in the mall that makes food. • “Food Producers” • Green in color due to chlorophyll.
  • 118. Vacuoles • The vacuoles store food, water, and chemicals, like water tank and pipes of the mall, which store water. • “Storage Tanks”
  • 119. Found in both plant and animal cells – In plant cells: very few and very large Vacuoles – In animal cells: many little ones Fluid-filled sacs Vacuoles
  • 120. Identified in 1833 by Robert Brown Found in both plant and animal cells Nucleus Large, oval shape Centrally located in cell Controls cell activities Contains genetic information (DNA)
  • 121. Nucleus • Nucleus regulates and controls cell activities, acting like the “brain” of the cell, like the mall office, which regulates and controls activities of the shopping mall. • “Control Center”
  • 122. NUCLEUS • Most prominent organelle. • All cells in the body contain nucleus except mature RBCs & uppermost layer of skin.
  • 123. Cell Nucleus: Functions • Bag of chromosomes: It contains most of the cell's genetic material. • Storage of DNA, DNA maintenance • Replication & repair of DNA • Site of transcription & post transcriptional processing/ modification
  • 124. The control center of a cell: -Controls the activities of cell by regulating gene expression. - Production of ribosomal subunits in the nucleolus Nucleolus: Actively transcribing region of nucleus • Synthesis of rRNA • Formation of ribosome subunits
  • 125. Nuclear membrane • The nuclear membrane protects the nucleus and also allow substances to pass in and out of the nucleus, as the cell membrane does the same for the cell; like the main office; like the walls of the mall and its entrance, which protect the office and let workers in and out. • “Gate of the Nucleus”
  • 126. FUNCTIONS CONT. Nuclear membrane Compartmentalizes the nucleus Nuclear pore Transport of molecules between the cytoplasm and the nucleus Chromatin DNA Replication and transcription Nuclear matrix Replication, DNA repair and transcriptional process Nucleolus Synthesis of rRNA and ribosomes
  • 127. Chromosomes • The chromosomes direct the activities of cells like a mall office director who works in the office and directs all the activities of the shopping mall. • “Director of the Cell”
  • 128. Golgi Apparatus Discovered in 1898 by Camillo Golgi Found in both plant and animal cells Looks like a flattened stack of membranes (or pancakes!) Processes and packages molecules, like lipids and proteins, that were made by the cell
  • 129. Ribosomes Found in both plant and animal cells Can be attached to the Endoplasmic Membrane or floating free in the cytoplasm Ribosomes:- • Produces proteins • The smallest organelles • It’s like the brick yard that supplies a city with what it’s made of!
  • 130. Endoplasmic Reticulum Found in both plant and animal cells • Network of tubes • Transports materials throughout the cell Endoplasmic Reticulum Two types – Smooth (no ribosomes) – Rough (covered with ribosomes) • It’s like a city’s highway system!
  • 132.
  • 133. Biomolecules Definition • Biomolecules are molecules that occur naturally in living organisms. • Biomolecules include macromolecules like proteins, carbohydrates, lipids and nucleic acids.
  • 134. • It also includes small molecules like primary and secondary metabolites and natural products. • Biomolecules consists mainly of carbon and hydrogen with nitrogen, oxygen, sulphur, and phosphorus. • Biomolecules are very large molecules of many atoms, that are covalently bound together.
  • 135. Classes of Biomolecules There are four major classes of biomolecules: • Carbohydrates • Lipids • Proteins • Nucleic acids
  • 136. Carbohydrates • Carbohydrates are often known as sugars, they are the 'staff of life' for most organisms. • They are the most abundant class of biomolecules in nature, based on mass. • Carbohydrates are also known as saccharides, in Greek sakcharon mean sugar or sweetness.
  • 137. • Carbohydrates consist of the elements carbon (C), hydrogen (H) and oxygen (O) with a ratio of hydrogen twice that of carbon and oxygen. General formula of carbohydrate is Cn H2n On • In their basic form, carbohydrates are simple sugars or monosaccharides.
  • 138. • These simple sugars can combine with each other to form more complex carbohydrates. • The combination of two simple sugars is a disaccharide. • Carbohydrates consisting of two to ten simple sugars are called oligosaccharides, and those with a larger numbers are called polysaccharides.
  • 139. Sugars • Sugars are white crystalline carbohydrates that are soluble in water and generally have a sweet taste.
  • 140. Classification of Carbohydrates • The carbohydrates are divided into three major classes depending upon whether or not they undergo hydrolysis, and if they do, on the number of products formed.
  • 141.
  • 142. Monosaccharides • The monosaccharides are polyhydroxy aldehydes or polyhydroxy ketones which cannot be decomposed by hydrolysis to give simpler carbohydrates. • Examples are glucose and fructose, both of which have molecular formula, C6H12O6. • Many saccharide structures differ only in the orientation of the hydroxyl groups (-OH).
  • 143. • This slight structural difference makes a big difference in the biochemical properties, and in the physical properties such as melting point . • A chain-form monosaccharide that has a carbonyl group (C=O) on an end carbon forming an aldehyde group (-CHO) is classified as an aldose. When the carbonyl group is on an inner atom forming a ketone, it is classified as a ketose.
  • 144. • On the basis of number of carbon atoms monosaccharide are further classified into following small units: (i) Trioses (C3 H6 O3) – It contain 3 carbon molecule. Examples are: Glyceraldehyde and and Dihydroxy acetone. Glyceraldehyde
  • 145. (ii) Tetroses(C4 H8 O4) – It contain 4 carbon molecules. Examples are: Erythrose, Erythrulose. D-Erythrose D-Threose D-Erythrulose
  • 146. (iii) Pentoses (C5 H10 O5) – It contain 5 carbon molecules. Examples are: Ribose, Ribulose, Arbinose,Xylulose, Deoxyribose. D-Ribose D-Arabinose D-Xylose D-Lyxose
  • 147. • The ring form of ribose is a component of ribonucleic acid (RNA). • Deoxyribose, which is missing an oxygen at position 2, is a component of deoxyribonucleic acid (DNA) • In nucleic acids, the hydroxyl group attached to carbon number 1 is replaced with nucleotide bases.
  • 149. (iv) Hexoses(C6H12O6) – It contain 6 carbon molecules. Examples are: Glucose, Mannose, Fructose, Galactose etc… D-Glucose D-Mannose D-Galactose
  • 150. • Structures that have opposite configurations of a hydroxyl group at only one position, such as glucose and mannose, are called epimers. • Glucose, also called dextrose, is the most widely distributed sugar in the plant and animal kingdoms and it is the sugar present in blood as "blood sugar".
  • 151. • Fructose, also called levulose or "fruit sugar", is shown here in the chain and ring forms. Galactose is a constituent of agar-agar. It is also called brain sugar. • Fructose and glucose are the main carbohydrate constituents of honey. D-Fructose Fructose
  • 152. (v) Heptoses (C7 H14 O7) – It contain 7 carbon molecules. Examples are: Sedoheptulose. Sedoheptulose has the same structure as fructose, but it has one extra carbon. Sedoheptulose is found in carrots. D-Sedoheptulose
  • 153. • Many simple sugars can exist in a chain form or a ring form, as illustrated by the hexoses above. • The ring form is favored in aqueous solutions, and the mechanism of ring formation is similar for most sugars.
  • 154. • The rearrangement produces alpha glucose when the hydroxyl group is on the opposite side of the - CH2OH group, or beta glucose when the hydroxyl group is on the same side as the - CH2OH group. α-D-Glucose β-D-Glucose
  • 155. • Monosaccharides forming a five-sided ring, like ribose, are called furanoses. Those forming six-sided rings, like glucose, are called pyranoses. Furanose Pyranose
  • 156. Oligosaccharides • These sugars are formed by linking of 2-10 units of monosaccharides. • In Oligosaccharides ,aldehyde or ketone group of one monosaccharide are linked with alcoholic group of another monosaccharide to form Glycosidic bond (C-O-C).
  • 157. • The most abundant oligosaccharides are disaccharides, formed by two monosaccharides, and especially in the human diet the most important are sucrose (common table sugar), lactose and maltose.
  • 158. (i) Disaccharides: • Carbohydrates which upon hydrolysis give two molecules of the same or different monosaccharides are called disaccharides. Three particular disaccharides are: Sucrose, Maltose & Lactose.
  • 159. (a) Sucrose: Also called saccharose, is ordinary table sugar refined from sugar cane or sugar beets. When Sucrose is hydrolyzed, it yields one unit of glucose and one unit of fructose. Sucrose
  • 160. (b) Maltose (also known as malt sugar): It occurs in the body as an intermediate product of starch digestion. When maltose is hydrolyzed, it yields two molecules of glucose. Maltose
  • 161. (c) Lactose ( also known as milk sugar): This disaccharide is found only in milk. When lactose is hydrolyzed it yields one unit of glucose and one unit of galactose. Lactose
  • 162.
  • 163. (ii) Trisaccharides: (a) Raffinose: Also called melitose, is a trisaccharide that is widely found in legumes and vegetables, including beans, peas, cabbage etc.. • It consists of galactose connected to sucrose via a 1α→6 glycosidic linkage. • Humans cannot digest saccharides with this linkage and the saccharides are fermented in the large intestine by gas-producing bacteria.
  • 165. Polysaccharides • Polysaccharide, also called glycan, the form in which most natural carbohydrates occur. • Polysaccharides may have a molecular structure that is either branched or linear. • Linear compounds such as cellulose often pack together to form a rigid structure; branched forms (e.g., gum arabic) generally are soluble in water and make pastes.
  • 166. • Polysaccharides composed of many molecules of one sugar or one sugar derivative are called homopolysaccharides (homoglycans). • Homopolysaccharides composed of glucose include glycogen and starch, the storage carbohydrates of animals and plants respectively; and cellulose, the important structural component of most plants.
  • 167. • Polysaccharides consisting of molecules of more than one sugar or sugar derivative are called heteropolysaccharides (heteroglycans). Most contain only two different units and are associated with proteins; like Peptidoglycan, proteoglycans etc.. • Hetropolysaccharides provide extracellular support for organisms of all kingdoms.
  • 168. • The polysaccharides described below play important roles in nutrition, biology, or food preparation. Types of polysaccharides: (i) Starch: Starch is the major form of stored carbohydrate in plants. Starch is composed of a mixture of two substances: amylose, an essentially linear polysaccharide, and amylopectin, a highly branched polysaccharide.
  • 169. • Both forms of starch are polymers of α-D- Glucose. Natural starches contain 10-20% amylose and 80-90% amylopectin. • Amylose forms a colloidal dispersion in hot water (which helps to thicken gravies) whereas amylopectin is completely insoluble.
  • 170. a) Amylose molecules consist typically of 200 to 20,000 glucose units which form a helix as a result of the bond angles between the glucose units. Amylose
  • 171. b) Amylopectin differs from amylose in being highly branched. Short side chains of about 30 glucose units are attached with 1α→6 linkages approximately every twenty to thirty glucose units along the chain. Amylopectin molecules may contain up to two million glucose units.
  • 172. Examples of starch are: Dextrins, Syrups, High fructose corn syrup(HFCS), Polydextrose etc.. (ii) Glycogen: Glucose is stored as glycogen in animal tissues by the process of glycogenesis.  Glycogen is a polymer of α-D-Glucose identical to amylopectin, but the branches in glycogen tend to be shorter (about 13 glucose units)
  • 173. Glucose chains are organized globularly like branches of a tree originating from a pair of molecules of glycogenin, a protein with a molecular weight of 38,000 that acts as a primer at the core of the structure. Glycogen is easily converted back to glucose to provide energy.
  • 174. (iii) Dextran: Dextran is a polysaccharide similar to amylopectin, but the main chains are formed by 1α→6 glycosidic linkages and the side branches are attached by 1α→3 or 1α→4 linkages.  Dextran is an oral bacterial product that adheres to the teeth, creating a film called plaque. It is also used commercially as food additives..
  • 176. (iv) Cellulose: Cellulose is a polymer of β-D- Glucose, which in contrast to starch, is oriented with -CH2OH groups alternating above and below the plane of the cellulose molecule thus producing long, unbranched chains. The absence of side chains allows cellulose molecules to lie close together and form rigid structures.
  • 177. Cellulose is the major structural material of plants. Wood is largely cellulose, and cotton is almost pure cellulose. Cellulose can be hydrolyzed to its constituent glucose units by microorganisms that inhabit the digestive tract of termites and ruminants.
  • 179. (v) Hemicellulose:  The term "hemicellulose" is applied to the polysaccharide components of plant cell walls other than cellulose, or to polysaccharides in plant cell walls which are extractable by dilute alkaline solutions. Hemicelluloses comprise almost one-third of the carbohydrates in woody plant tissue.
  • 180. The chemical structure of hemicelluloses consists of long chains of a variety of pentoses, hexoses. Hemicelluloses may be found in fruit, plant stems & grain. Although hemicelluloses are not digestible, they can be fermented by yeasts and bacteria.
  • 181. • The polysaccharides yielding pentoses on hydrolysis are called pentosans. Xylan is an example of a pentosan consisting of D-xylose units with 1β→4 linkages. Xylan
  • 182. (vi) Chitin:  Chitin is an unbranched polymer of N-Acetyl- D-glucosamine. It is found in fungi and is the principal component of arthropod and lower animal exoskeletons, e.g., insect, crabs etc.. It may be regarded as a derivative of cellulose, in which the hydroxyl groups of the second carbon of each glucose unit have been replaced with acetamido (-NH(C=O)CH3) groups.
  • 183. Chitin
  • 184. (vii) Pectin: Pectin is a polysaccharide that acts as a cementing material in the cell walls of all plant tissues. Pectin is the methylated ester of polygalacturonic acid, which consists of chains of 300 to 1000 galacturonic acid units joined with 1α→4 linkages. Pectin is an important ingredient of fruit preserves, jellies, and jams.
  • 185. Pectin is a polymer of α-Galacturonic acid with a variable number of methyl ester (-COOCH3) groups.
  • 186. Carbohydrates have six major functions within the body: • Providing energy and regulation of blood glucose • Sparing the use of proteins for energy • Breakdown of fatty acids and preventing ketosis • Biological recognition processes i.e. they are essential for cells to communicate with each other. • Flavor and Sweeteners • They have the potential to reduce the risks of many chronic diseases.
  • 187. Lipids: Fats & Oils
  • 188. LIPIDS • Lipids are naturally occurring hydrophobic molecules. • They are heterogeneous group of compounds related to fatty acids. They include fats, oils, waxes, phospholipids, etc. • They make up about 70% of the dry weight of the nervous system. Lipids are crucial for the healthy functioning of the nerve cells.
  • 189. • Lipids are greasy or oily organic substances; lipids are sparingly soluble in water and are soluble in organic solvents like chloroform, ether and benzene. • Lipids are important constituent of of the diet because they are a source of high energy value. • Lipids combined with proteins are important constituents of the cell membranes and mitochondria of the cell. Lipids are not generally macromolecules.
  • 191. • They may be classified based on their physical properties at room temperature (solid or liquid, respectively fats and oils), on polarity, or on their essentiality for humans, but the preferable classification is based on their structure.
  • 192. Types of Lipid 1.Triglycerides [Fats & Oils] 1. Waxes 2. Phospholipids 3. Steroids 4. Glycolipids 5. Lipoproteins 6. Terpenes
  • 193. Based on structure, they can be classified in three major groups.
  • 194. 1. Simple Lipids or Homolipids • These are esters of fatty acids with various alcohols. (A)Fats and Oils: Esters of fatty acids with glycerol. The difference between fat and oil is only physical. Thus, oil is a liquid while fat is a solid at room temperature. These triglycerides (or triacylglycerols) are found in both plants and animals, and compose one of the major food groups of our diet.
  • 195. Fats & Oils • the commonest lipids in nature • the constituents of fats are:- fatty acids (alkanoic acids) glycerol (propane 1-2-3 triol)
  • 196. (B)Waxes: Esters of fatty acids(usually long chain)with alcohols other than glycerol. These alcohols may be aliphatic or alicyclic. Cetyl alcohol [CH3(CH2)15OH] is most commonly found in waxes. The name cetyl derives from the whale oil (Latin: cetus) from which it was first isolated. Example: Beeswax(insect wax), Carnauba wax (important plant wax; also a complex mixture ; hardest known wax)
  • 197. Fatty acids - general formula: R.COOH - most have an even number of C - most commonly 16-18 C16H32O2 R - fatty acids may be:  saturated or unsaturated
  • 198. Saturated fatty acid [Single bonds only] Unsaturated fatty acid [Double bonds]
  • 199. Stearic acid, C17H35COOH – Saturated fatty acid Oleic acid, C17H33COOH – Unsaturated fatty acid
  • 200. The more double bonds present, the more bent the molecule is
  • 201. Properties of Saturated Fatty Acids • Contain only single C–C bonds • Closely packed • Strong attractions between chains • High melting points • Solids at room temperature 201
  • 202. Properties of Unsaturated Fatty Acids • Contain one or more double C=C bonds • Nonlinear chains do not allow molecules to pack closely • Few interactions between chains • Low melting points • Liquids at room temperature 202
  • 203. Fatty Acids • The Length of the Carbon Chain –long-chain, medium-chain, short-chain • The Degree of Unsaturation –saturated, unsaturated, monounsaturated, polyunsaturated • The Location of Double Bonds –omega-3 fatty acid, omega-6 fatty acid
  • 204. Monounsaturated Fatty Acid (MUFA) One carbon-carbon double bond
  • 205. Polyunsaturated Fatty Acid (PUFA) More than one carbon-carbon double bond
  • 206. Location of Double Bonds • PUFA are identified by position of the double bond nearest the methyl end (CH3) of the carbon chain; this is described as a omega number; • If PUFA has first double bond 3 carbons away from the methyl end=omega 3 FA • 6 carbons from methyl end=omega 6 FA
  • 207.
  • 208. Cis and Trans Fatty Acids • Because of the presence of doubles bond in aliphatic hydrocarbon chain of unsaturated fatty acids, they can exhibit geometrical isomerism also called as cis-trans isomerization. • Naturally occurring fatty acid exhibit cis- configuration which can be modified to artificial configuration known as trans.
  • 209. • In cis-form the hydrogen atoms of double bonded carbon atom oriented on same side, however in trans form they oriented in opposite direction. • The differences in geometry of trans and cis- unsaturated fatty acids play an important role in biological processes.
  • 210. • Cis and trans forms of fatty acids show different physical and chemical properties just like other organic geometrical isomers. • Trans isomers show high melting points due to closely packed structure compare to cis isomers. • The configuration of unsaturated fatty acids not only affects their physical properties but also their health implications.
  • 211. Some other differences between cis and trans-fatty acids are as follows.
  • 212. 2. Compound Lipids or Heterolipids • Esters of fatty acids containing groups in addition to an alcohol and a fatty acid.
  • 213. (a)Phospholipids: Lipids containing, in addition to fatty acids and an alcohol, a phosphoric acid residue. • They frequently have nitrogen containing bases and other substituent's, e.g., in glycerophospholipids the alcohol is glycerol and in sphingophospholipids the alcohol is sphingosine.
  • 214. (b) Glycolipids (glycosphingolipids): Lipids containing a fatty acid, sphingosine, and carbohydrate. (c) Other complex lipids: Lipids such as sulfolipids and aminolipids. Lipoproteins may also be placed in this category.
  • 215. 3. Precursor and derived lipids: • This group includes: –Fatty Acids. –Glycerol. –Cholesterol. –Steroid hormones. –Fatty aldehydes. –Fat soluble vitamins [ A D E K]. –Some other alcohols. 215
  • 216. Derived lipids • Derived lipids are the substances derived from simple and compound lipids by hydrolysis. • These includes fatty acids, alcohols, monoglycerides and diglycerides, steroids, terpenes, carotenoids. • The most common derived lipids are steroids, terpenes and carotenoids.
  • 217. • Steroids do not contain fatty acids, they are nonsaponifiable, and are not hydrolyzed on heating. • They are widely distributed in animals, where they are associated with physiological processes. • They performs various functions such as hormones and contributes to the structure of cell membranes.
  • 218. Steroids • Steroids are: Lipids containing the steroid nucleus, which is a fused structure of four rings. • Found in cholesterol, bile salts, hormones, and vitamin D.
  • 219. a. Cholesterol • The most abundant steroid in the body. •Contains 27 carbon atoms. • At C3 there is a –OH group; so it is an alcohol. Composed of the steroid nucleus with methyl groups, an alkyl chain, and a hydroxyl group attached.
  • 220. b. Bile Salts • Are synthesized from cholesterol and stored in the gall bladder. • Emulsify fats and oils to give a greater surface area for lipid digesting enzymes.
  • 221. Terpenes • In majority are found in plants. Example: natural rubber. Gernoil, etc. • Are volatile organic compounds which are odoriferous constituents of essential oils. • They contain carbon, hydrogen and oxygen and are not aromatic in character.
  • 222. Carotenoids • Carotenoids are tetraterpenes. They are widely distributed in both plants and animals. • They are exclusively of plant origin. • Due to the presence of many conjugated double bonds, they are colored red or yellow. Example: Lycopreene, carotenes, Xanthophylls.
  • 223. Function of Lipids Lipids perform several biological functions: • Lipids are storage compounds, triglycerides serve as reserve energy of the body. • Lipids are important component of cell membranes structure in eukaryotic cells. • Lipids regulate membrane permeability. • They serve as source for fat soluble vitamins like A, D, E, K.
  • 224. • As lipids are small molecules and are insoluble in water, they act as signalling molecules. • Cholesterol maintains fluidity of membranes by interacting with lipid complexes. • Layers of fat in the subcutaneous layer, provides insulation and protection from cold. Body temperature maintenance is done by brown fat.
  • 225. Summary  Lipids It’s sub types: Classification Fatty Acids Types of fatty acids Compound and derived lipids Functions of lipids
  • 226.
  • 227. What is a Protein? The word protein came from a Greek word “Proteios” Proteins are like long necklaces with differently shaped beads. Each "bead" is a small molecule called an amino acid. Compounds composed of carbon, hydrogen, oxygen, and nitrogen and arranged as strands of amino acids
  • 228. • Proteins are a class of most important compounds that are found in living organisms. • Proteins are the main constituents of our body such as muscles, skin, hair and nails. • Protein carry all vital life processes in the human system. • Proteins are a vast class of substances of almost unbelievable diversity in structure and function.
  • 229. What is Amino Acid? • Amino acids are derivatives of carboxylic acids formed by substitution of -hydrogen for amino functional group
  • 230. What do Amino Acids Do? Amino acids are essential to life, have a role in metabolism, and are important in nutrition. They form short polymer chains called peptides, as well as longer chains that are called polypeptides or proteins. About 75 percent of the human body is made up of chains of amino acids, which is why they are so vital to how your system functions. All the chemical reactions that occur in the body depend on amino acids and the proteins they build.
  • 231. Amino Acids • Amino Acids are the building units of proteins. Proteins are polymers of amino acids linked together by what is called “ Peptide bond”. • There are about 300 amino acids occur in nature. Only 20 of them occur in proteins. • Each amino acid has 4 different groups attached to α- carbon ( which is C-atom next to COOH). These 4 groups are : amino group, COOH gp, Hydrogen atom and side Chain (R) R
  • 232. • At physiological PH (7.4), -COOH gp is dissociated forming a negatively charged carboxylate ion (COO-) and amino gp is protonated forming positively charged ion (NH3+) forming Zwitter ion
  • 233. • Amino acid structures differ at the side chain (R- groups). • Abbreviations: three or one letter codes • Amino acids (except glycine) have chiral centers: • There are 20 commonly occurring amino acids that make up proteins, and the order of amino acids in proteins determines its structure and biological function.
  • 234. Classification of amino acids • Amino acids are classified into different ways based on polarity, structure, nutritional requirement, metabolic fate, etc. • Generally used classification is based on polarity. • Amino acid polarity chart shows the polarity of amino acids.
  • 235. Classification on polarity basis Based on polarity, amino acids are classified into four groups as follows, • Non-polar amino acids. • Polar amino acids with no charge. • Polar amino acids with positive charge. • Polar amino acids with negative charge.
  • 236.
  • 237.
  • 238.
  • 239.
  • 240.
  • 241. Classification of Proteins Proteins ate divided into three main classes : 1. Simple proteins 2. Conjugated proteins 3. Derived proteins
  • 243. Simple proteins • The simple proteins are those which are made of amino acid units only, joined by peptide bond. • Upon hydrolysis they yield mixture of amino acids or their derivatives. They include the following groups:-
  • 244. (a) Albumins: These are water soluble-proteins found in all body cells and also in the blood stream. Examples are: lacto albumin found in milk ; serum albumin found in blood and egg albumin found in egg. (b) Globulins: These are insoluble in water but are soluble in dilute salt solutions of strong acids and bases. Examples of globulins are lactoglobulin found in milk and ovoglobulin in egg yolk.
  • 245. (c) Glutelins: These are soluble in dilute acids and alkalis. The protein glutenin of wheat and oryzenin of rice is an example. They occur only in plant material. (d) Histones: These are water soluble proteins in which basic amino acids predominates. They are rich in arginine or lysine. In eukaryotes the DNA of the chromosomes is associated with histones to form nucleoproteins.
  • 246. (e) Protamines:  These are water soluble basic polypeptides with a low molecular weight (about 4,000 Daltons). Protamines are found bound to DNA in spermatozoa of some fishes. Examples of protamines are salmine (in salmon) and sturine (in sturgeons)
  • 247. Conjugated proteins • These consist of simple proteins in combination with some non-protein component. • The non-protein groups are called prosthetic groups. Conjugated protein includes the following group:-
  • 248. (a) Nucleoproteins: (Protein + nucleic acid). Nucleoproteins are proteins in combination with nucleic acids. Examples are: Nucleohistone. (d) Chromoproteins: These are proteins in combination with a prosthetic group that is a pigment. Examples are the respiratory pigments hemoglobin.
  • 249. (c) Phosphoproteins (Protein+phosphate): Phosphoproteins are proteins in combination with a phosphoric acid residue as a prosthetic group. Examples of phosphoproteins are casein of milk and vitellin in egg yolk. (e) Lipoproteins: These are proteins conjugated with lipids. There are different types of lipoproteins, high density lipoproteins (HDL), low density lipoproteins(LDL); Very low density lipoprotein(VLDL).
  • 250. (f) Metalloproteins: These are proteins conjugated to metal ion (s). Example : The heme protein, which contain iron are classed as chromoproteins also are metalloproteins.
  • 251. Derived proteins  They are substances resulting from the decomposition of simple and conjugated proteins as in peptones, peptides. Derived proteins are subdivided into primary derived proteins and secondary derived proteins.
  • 252. Derivatives of proteins due to action of heat, enzymes, or chemical reagents. a) Primary Derived b) Secondary Derived
  • 253. Primary derived proteins – • Proteans, • Metaproteins and • Coagulated proteins. Example: cooked egg albumin etc.. Secondary derived proteins – • Proteoses, • Peptones and • Polypeptides.
  • 255. Four different levels of structure – Primary, Secondary, Tertiary and Quaternary
  • 258.
  • 260.
  • 261. Protein Functions Antibodies Contractile Proteins Enzymes Hormonal Proteins Transport Proteins Storage Proteins Structural Proteins
  • 262.
  • 264. Composition of DNA • A pentose sugar – Deoxy ribose sugar • Nucleotides – A,T,G,C • A phosphate
  • 265. Pentose sugar in DNA • Deoxyribose sugar – 4 C atoms and oxygen molecule forms the ring – 5th C atom is outside the, part of CH2 group – 3 OH groups at positions 1,3,5
  • 266. Nitrogen Bases • There are four nitrogen bases making up four different nucleotides. Adenine Guanine Thymine Cytosine Pyrimidines Purines A C G T N base
  • 267. Nucleic Acid Composition phosphate nucleotide N base PO4 SugarSugar PO4 N base The numbers are the positions of the carbons on the sugar. (the 3’ end) 5 4 3 2 1 (the 5’ end) sugar nitrogen base DeoxyriboNucleic Acid
  • 268. Nucleosides & Nucleotides • Nucleotide = a nitrogenous (nitrogen- containing) base + a pentose + a phosphate • Nucleoside = a nitrogenous (nitrogen- containing) base + a pentose
  • 269.
  • 270. A molecule of DNA is formed by millions of nucleotides joined together in a long chain PO4 PO4 PO4 PO4 sugar-phosphate backbone + bases Joined nucleotides
  • 272. The bases always pair up in the same way Adenine forms a bond with Thymine And cytosine bonds with guanine Adenine Thymine Cytosine Guanine
  • 273. The paired strands are coiled into a spiral called A DOUBLE HELIX sugar-phosphate chain Bases
  • 274. Formation of Phosphodiester bonds to make a polynucleotide strand
  • 275. Structure of DNA: Watson & Crick model
  • 276.
  • 277. Erwin Chargaff A A A A A A A T T T T T T T C C C G G G
  • 280.
  • 281. DNA as a genetic material
  • 282. Is the Genetic Material Protein or DNA
  • 283. Direct evidences come from : • Frederick Griffith’s (1928) experiment. • Hershey and Chase (1952 ) experiment.
  • 285. STEPS IN THE EXPERIMENT 1 LIVE SIII 2 LIVE RII 3 H K S III 4 H K S III & LIVE RII Strains of Streptococcus pneumoniae injected to mice
  • 286. Griffith’s Experiment RII SIII Transformation takes place in step 4 gives clue for DNA as “genetic material” 1 2 3 4
  • 288. Life Cycle of T-2 Phage Phage is made of DNA and protein coat Only DNA enters in the Bacterial cell and protein coat is left out side 288
  • 289. Events which take place in life cycle of bacteriophage
  • 290.
  • 291.
  • 293. Summary of Hershey & Chase (1952 ) experiment
  • 296. What we will be discussing?
  • 300. THE NUCLEOTIDE: RNA OH O=P-O-5CH2 BASE OH O 4C 1C H H H H 3C 2C OH 0H Adenine Guanine Cytosine Uracil
  • 302. Types of RNA Messenger RNA (mRNA) carries information from DNA to the ribosome Transfer RNA (tRNA) involved in the process of translation Ribosomal RNA (rRNA) RNA Types
  • 303. Messenger RNA (mRNA) Comprises only 5% of the RNA in the cell
  • 308.
  • 309. Differences between RNA and DNA S.No. RNA DNA 1) Single stranded mainly except when self complementary sequences are there it forms a double stranded structure (Hair pin structure) Double stranded (Except for certain viral DNA s which are single stranded) 2) Ribose is the main sugar The sugar moiety is deoxy ribose 3) Pyrimidine components differ. Thymine is never found(Except tRNA) Thymine is always there but uracil is never found 4) Being single stranded structure- It does not follow Chargaff’s rule It does follow Chargaff's rule. The total purine content in a double stranded DNA is always equal to pyrimidine content.
  • 310. Differences between RNA and DNA S.No. RNA DNA 5) RNA can be easily destroyed by alkalies to cyclic diesters of mono nucleotides. DNA resists alkali action due to the absence of OH group at 2’ position 6) RNA is a relatively a labile molecule, undergoes easy and spontaneous degradation DNA is a stable molecule. The spontaneous degradation is very slow. The genetic information can be stored for years together without any change. 7) Mainly cytoplasmic, but also present in nucleus (primary transcript and small nuclear RNA) Mainly found in nucleus, extra nuclear DNA is found in mitochondria, and plasmids etc 8) The base content varies from 100- 5000. The size is variable. Millions of base pairs are there depending upon the organism
  • 311. S.No. RNA DNA 9) There are various types of RNA – mRNA, r RNA, t RNA. These RNAs perform different and specific functions. DNA is always of one type and performs the function of storage and transfer of genetic information. 10) No variable physiological forms of RNA are found. The different types of RNA do not change their forms There are variable forms of DNA (A, B and Z) 11) RNA is synthesized from DNA, it can not form DNA(except by the action of reverse transcriptase). It can not duplicate (except in certain viruses where it is a genomic material ) DNA can form DNA by replication, it can also form RNA by transcription. 12) Many copies of RNA are present per cell Single copy of DNA is present per cell.
  • 312.
  • 313.
  • 314. • Organic (carbon-containing) compounds that are essential in small amounts for body processes • Do not provide energy • Enable the body to use the energy provided by fats, carbohydrates, and proteins • Mega doses can be toxic.
  • 316.
  • 317.
  • 318.
  • 319. Vitamin A Alternative Names: Retinol; Retinal; Retinoic acid; Carotenoids • Is a fat-soluble vitamin. • Preformed vitamin A is found in animal products . • Pro-vitamin A is found in plant-based foods
  • 320. Vitamin A (and carotenoids) • Functions: – Normal vision – Protects from infections – Regulates immune system – Antioxidant (carotenoids) • Food sources: – Liver – Fish oil – Eggs – Fortified milk or other foods – Red, yellow, orange, and dark green veggies (carotenoids)
  • 321. Excess  Birth defects, hair loss, dry skin, headaches, nausea,  dry mucous membranes, liver damage, and bone and joint pain Deficit  Night blindness,  dry, rough skin,  increased susceptibility to infections
  • 322. Vitamin D Alternative Name: Calciferol Regulation of Calcium metabolism
  • 323. Vitamin D (the sunshine vitamin) Functions: –Promotes absorption of calcium and phosphorus –Helps deposit those in bones/teeth –Regulates cell growth –Plays role in immunity Sources: – Sunlight (10 – 15 mins 2x a week) – Salmon with bones – Milk – Orange juice (fortified) – Fortified cereals
  • 324. Excess  Deposits of calcium and phosphorus in soft tissues, kidney, and heart damage. Deficit  Poor bone and tooth formation, rickets which causes malformed bones and pain in infants  Osteomalacia (softening of bones)  Osteoporosis (brittle, porous bones)
  • 325. VITAMIN E Alternative Name: Tocopherol Functions:  Antioxidant Enhances immune system Retards spoilage of commercial foods
  • 326. Sources of Vitamin E • Vegetable oils: corn, soybean, and products made from them. • Wheat and green leafy vegetables
  • 327. Excess  Relatively nontoxic, fat- soluble vitamin  Excess stored in adipose tissue  Avoid long-term mega doses. Deficit  Serious neurological defects can occur from mal absorption.
  • 328. Vitamin K Alternative Name: Phylloquinone  Made up of several compounds essential for blood clotting. Vitamin K is destroyed by light and alkalis.
  • 329. Functions of Vitamin K Formation of prothrombin for clotting of blood
  • 330. Sources of Vitamin K • Green leafy vegetables such as broccoli, cabbage, spinach • Bacteria in small intestine synthesizes some vitamin K, but must be supplemented by dietary sources.
  • 331. Excess  Anemia can result from excessive amounts of synthetic vitamin K. Deficit  Defective blood coagulation, which increases clotting time and makes client prone to hemorrhage.
  • 332. Water-Soluble Vitamins • Vitamin B complex and C • Dissolve in water • Easily destroyed by air, light, and cooking
  • 333. Vitamin B1 Alternative Name: Thiamin Function:  Used in metabolism of carbohydrates for energy. muscle and nerve function, and hydrochloric acid production in the stomach
  • 334. Sources of Vitamin B1 • Whole grains, • Rice, • Pasta, • Fortified cereals, • Meat and pork.
  • 335. Deficiency Rare- Beriberi Loss of muscle function, Nerve damage, Mental confusion
  • 336. Vitamin B2 Alternative Name: Riboflavin Function: Helps in energy production, Making niacin( Vit. B3), Red blood cell formation & human growth.
  • 337. Sources of Vitamin B2 • Dairy, • Eggs, • Green leafy vegetables, • Nuts, meat, • Legumes, and • Enriched flour
  • 339. Vitamin B3 Alternative Name: Niacin Function: Used in metabolism, to produce hormones, enzyme & nerve function & reducing cholesterol
  • 340. Sources of Vitamin B3 • Pork, • Fish, beef, • Peanut butter, • Legumes, • Enriched and fortified grains
  • 341. Deficiency Pellagra is characterized by the 4 D’s: Dermatitis, Diarrhea, Dementia & Death
  • 342. Vitamin B5 Alternative Name: Pantothenic Acid Function: Used to make blood cells, cholesterol, hormones ,metabolize fat & carbohydrates
  • 343. Sources of Vitamin B5 • Poultry, fish, • Cereals, • Unprocessed foods.
  • 344. Deficiency • Very rare- only seen in severe malnutrition. Symptoms are: • Headache, • fatigue, • burning & numbness of feet
  • 345. Vitamin B6 Alternative Name: Pyridoxine Function: Protein metabolism, Blood cell formation, Immune system function, and Niacin production
  • 346. Sources of Vitamin B6 • Chicken, • Pork, fish, • Grains, • Nuts & legumes
  • 348. Vitamin B7 Alternative Name: Biotin Function: Used in fatty acid synthesis, also other functions. Maintaining a strong immune system & proper working of the nervous system.
  • 349. Sources of Vitamin B7 • Generally produced in the intestine, in the presence of healthy intestinal flora. • Cereals, • Pulses & legumes, • Vegetables, nuts
  • 351. Vitamin B9 Alternative Name: Folic Acid Function: For synthesis of glycine, methionine, nucleotides etc.. Important for rapidly dividing cells
  • 352. Sources of Vitamin B9 • Broccoli, • Citrus Fruits, • Beans, Peas • Avocado, • Spinach
  • 353. Deficiency Linked to neural tube defects in fetus, Inflammation of mouth & tongue, poor growth, depression & mental confusion, Megaloblastic anemia
  • 354. Vitamin B12 Alternative Name: Cyanocobalamin Function: B12 is also used in regenerating folate Helps in the formation of red blood cells
  • 355. Sources of Vitamin B12 • Meats (beef liver) • Meat, • Poultry, • Eggs, • Milk and other dairy foods
  • 356. Deficiency Sore tongue, Stomach upset and weight loss Rapid heartbeat and breathing Weakness, tiredness
  • 357. Vitamin C Alternative Name: Ascorbic Acid Function: An antioxidant vitamin, For healthy teeth, gums and blood vessels; Improves iron absorption and resistance to infection
  • 358. Sources of Vitamin C • Fresh vegetables & fruits, • Broccoli, • Cauliflower, lemon, cabbage, pineapples, strawberries, citrus fruits.
  • 359. Deficiency Sore tongue, Stomach upset and weight loss Rapid heartbeat and breathing Weakness, tiredness
  • 361. What Are Enzymes? • Most enzymes are Proteins (tertiary and quaternary structures) • Act as Catalyst to accelerates a reaction • Not permanently changed in the process
  • 362. Enzymes • Are specific for what they will catalyze • Are Reusable • End in –ase -Sucrase -Lactase -Maltase
  • 363.
  • 364. How do enzymes Work? Enzymes work by: weakening bonds which lowers activation energy
  • 365. Enzymes lower the activation energy of a reaction Final energy state of products Initial energy state of substrates Activation energy of uncatalysed reactions Activation energy of enzyme catalysed reaction Progress of reaction (time) Energylevelsofmolecules
  • 366. Enzyme-Substrate Complex The substance (reactant) an enzyme acts on is the substrate Enzyme Substrate Joins
  • 367. Active Site • A restricted region of an enzyme molecule which binds to the substrate. EnzymeSubstrate Active Site
  • 368. Enzymes lower activation energy by forming an enzyme/substrate complex Substrate + Enzyme Enzyme/substrate complex Enzyme/product complex Product + Enzyme
  • 370.
  • 377. Theories for Enzyme- Substrate Binding Two Theories have been proposed to explain the interaction of enzyme and substrate  LOCK & KEY MODEL INDUCED – FIT THEORY
  • 379. Lock-and-key hypothesis assumes the active site of an enzyme is rigid in its shape How ever crystallographic studies indicate proteins are flexible.
  • 380. 380 Induced Fit • A change in the shape of an enzyme’s active site • Induced by the substrate
  • 381. The Induced-fit hypothesis suggests the active site is flexible and only assumes its catalytic conformation after the substrate molecules bind to the site. When the product leaves the enzyme the active site reverts to its inactive state.
  • 383. Enzyme activity How fast an enzyme is working Rate of Reaction Rate of Reaction = Amount of substrate changed (or amount product formed) in a given period of time.
  • 384. Enzyme activity Four Variables Temperature pH Enzyme Concentration Substrate Concentration
  • 385. RateofReaction Temperature 0 20 30 5010 40 60 40oC - denatures 5- 40oC Increase in Activity <5oC - inactive
  • 386. Effect of heat on enzyme activity If you heat the protein above its optimal temperature bonds break meaning the protein loses it secondary and tertiary structure
  • 387. Effect of heat on enzyme activty Denaturing the protein ACTIVE SITE CHANGES SHAPE SO SUBSTRATE NO LONGER FITS Even if temperature lowered – enzyme can’t regain its correct shape
  • 395. Cofactors and Coenzymes • Inorganic substances (zinc, iron) and vitamins (respectively) are sometimes need for proper enzymatic activity. • Example: Iron must be present in the quaternary structure - hemoglobin in order for it to pick up oxygen.
  • 396. Two examples of Enzyme Inhibitors a. Competitive inhibitors: are chemicals that resemble an enzyme’s normal substrate and compete with it for the active site. Enzyme Competitive inhibitor Substrate
  • 397. Inhibitors b.Noncompetitive inhibitors: Inhibitors that do not enter the active site, but bind to another part of the enzyme causing the enzyme to change its shape, which in turn alters the active site. Enzyme active site altered Noncompetitive Inhibitor Substrate
  • 399. Enzymes in industry • There are many uses of enzymes in industry. Examples of these are: • Clothes/dishwashing detergents • Baby food • Starch(HFCs) • Glucose(Fructose-Slimming Aid) • Medical Diagnosis • Diabetes Control • Curing Disease
  • 400. Enzymes in Clothes/Dishwasher Detergents • People use biological detergents to remove stains. • Biological washing powders contain proteases and lipases. • These enzymes break down proteins and fats in the stain. Advantages Enzymes give you a cleaner wash. Work at lower temperatures-this means you use less electricity. Disadvantages If water too hot, enzymes become denatured.
  • 401. Enzymes in baby food • Proteases are used to make baby food. • Proteases ‘pre-digest’ some of the protein in the food. Advantages Treating food with protease enzymes make it easier for a baby’s digestive system to cope with it.
  • 402. Starch(HFCS) • Carbohydrases are used to convert starch into sugar (glucose) syrup. Did You Know? HFC stands for High Fructose Corn Syrup.
  • 403. Enzymes In Slimming Aids • The enzyme, isomerase, is used to change glucose syrup to fructose syrup. Glucose and fructose contain exactly the same amount of energy.
  • 405. Enzymes To Diagnose and Control Disease • A common test for sugar in the urine relies on a color change on a test strip. The test strip contains a chemical indicator and an enzyme.
  • 406. Enzymes to cure disease If you have a heart attack. An enzyme called streptokinase will be injected into your blood as soon as possible.
  • 407.
  • 412.
  • 413. All hormones in the human body can be divided into lipid-derived, amino acid-derived, and peptide hormones.
  • 414. Key Points • Most lipid hormones are steroid hormones, which are usually ketones or alcohols and are insoluble in water. • Steroid hormones (ending in '-ol' or '-one') include estradiol, testosterone, aldosterone, and cortisol. • The amino acid-derived hormones (ending in '-ine') are derived from tyrosine and tryptophan and include epinephrine and norepinephrine (produced by the adrenal medulla).
  • 415. Key Points • Amino acid-derived hormones also include thyroxin (produced by the thyroid gland) and melatonin (produced by the pineal gland). • Peptide hormones consist of a polypeptide chain; they include molecules such as oxytocin (short polypeptide chain) or growth hormones (proteins). • Amino acid-derived hormones and protein hormones are water-soluble and insoluble in lipids.
  • 417. Plant Hormones • AUXIN • CYTOKININ • GIBBERELLIN • ETHYLENE
  • 418.