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PHLOEM
DIFFERENTIATION
PARUL SHARMA
PhD Botany
Plant vasculature consists of two major conductive cell types, xylem tracheary elements and
phloem sieve elements (SEs). Both cell types undergo a highly specialized differentiation
process.
The phloem is the tissue that translocates the products of photosynthesis from mature
leaves to areas of growth and storage, including the roots.
Functional phloem consists of sieve elements (SEs) and companion cells (CCs). While
SEs are enucleated conducting cells in the phloem, CCs are cells with intact cellular
components and are known to support the functioning of SEs. CCs are closely linked to SEs
by symplastic connections mediated by plasmodesmata (PD).
In addition, phloem tissue contain Phloem parenchyma cells (which store and release food
molecules). In some cases the phloem tissue also includes fibers and sclereids (for
protection and strengthening of the tissue) and laticifers (latex-containing cells). However,
only the sieve elements are directly involved in translocation.
ELEMENTS OF PHLOEM TISSUE
Sieve elements in the phloem are the main cells transporting photosynthates from source tissues,
such as leaves, towards the parts of the plant where they are consumed, also referred to as sink
tissues. The SEs consist of elongated cells with a modified and strengthened cell wall that are
connected via sieve plates, specialized cell walls that have many large perforations to enable
pressure-driven mass flow.. in addition to the role of phloem as simple pipe for the the mass flow of
sucrose phloem sieve elements also plays an important role in mediating long distance
communication by transporting signalling molecules such as sucrose hormones peptides proteins
and RNAs. SIeve tube elements are present in the angiosperms while relatively less specialised
sieve cells are present in the gymnosperms.
Each sieve tube element is associated with one or more companion cells. The division of a single
mother cell forms the sieve tube element and the companion cell. Numerous plasmodesmata
penetrate the walls between sieve tube elements and their companion cells, suggesting a close
functional relationship and a ready exchange of solutes between the two cells. CC play a role in the
transport of photosynthetic products from producing cells in mature leaves to the sieve elements in
the minor (small) veins of the leaf. They are also thought to take over some of the critical metabolic
functions, such as protein synthesis, that are reduced or lost during differentiation of the sieve
elements.
The ontogeny of phloem sieve element along the longitudinal axis of the Arabidopsis root -
In the the root of of arabidopsis the root meristem resides at the root tip and consists of the stem
cell niche, that contain mitotically less active quiescent centre and the surrounding stem cells. Upon
existing this cell division zone cells begin to expand and become committed to a particular cell fate
that results in longitudinal zonation pattern.
In the Arabidopsis root, phloem initials located close
to the quiescent center first divide periclinally, giving
rise to protophloem precursors; these precursors then
further divide to make protophloem and the neighboring
metaphloem initials. Since the two phloem types have
very similar structures, distinguishing them can be
challenging. The discovery of genes that play a role
early in phloem development is therefore a priority to
improve our understanding of the regulatory mechanisms
by which proto-/meta-phloem cell fate is determined.
Sieve elements undergo a specialized differentiation process -
Differentiated SEs are generally slender, elongated cells aligned along the longitudinal axis to
establish a sieve tube.To facilitate the long-distance transport, SEs undergo a specialized
differentiation process.
● Cells entering the differentiation stage undergo cell wall thickening, which gives mechanical
support against the high turgor pressure.
● The cells develop perforated walls at the cell junctions within the sieve tube. Through these
junctions, called sieve plates, SEs establish symplastic continuity throughout the sieve tube.
● They lose many organelles such as vacuoles, the rough endoplasmic reticulum (ER), and the
Golgi apparatus, and their cytoskeleton degenerates.
● However, other cellular components, such as the plasma membrane, smooth ER,
mitochondria, phloem plastids and P-proteins (proteinaceous material in the phloem ) , are
retained within the cell.
● The enucleation process takes place at the very last stage of differentiation.
● In spite of the degeneration of a majority of their organelles, SEs are still considered living
cells; neighboring CCs, to which they are symplastically connected by PD, support the SEs.
Molecular mechanism regulating sieve element specification and differentiation
Overview of protophloem SE differentiation
within the root meristem of Arabidopsis
thaliana. 4 zones in the root tip can be
distinguished: Meristem, Transition,
Elongation and Differentiation. The
protophloem SE cell file is fully differentiated
before the end of the transition zone as
shown in the enlargement. The timing of
differentiation progress has not been
investigated yet, thus indicated zones within
the SE cell stand are approximations. The
first cell of the expression domains of known
SE regulators is indicated with arrow heads.
The yellow and red cell mark the first and
second periclinal cell division, respectively.
The transit amplifying cells divide several
times anticlinally. The differentiating cells
elongate and undergo cell wall thickening,
sieve plate morphogenesis and autolysis. The
green cell is enucleating.
A number of genes are involved in phloem development :
• The subclade 2 of the SUPRESSOR OF MAX2-LIKE (SMXL) genes, namely SMXL3, SMXL4
and SMXL5, play redundantly a major role in early protophloem development. The
combinatorial double mutants of these three genes show strongly reduced root growth while
the smxl3 smxl4 smxl5 triple mutant is seedling lethal. The smxl4 smxl5 mutant revealed lack
of distinct cellular changes of protophloem cells, e.g. enucleation does not occur resulting in
reduced phloem sap transport .
• Another gene that acts is OCTOPUS (OPS). The OPS protein is polarly localized in
shootward plasma membrane.
In the ops knockout mutant protophloem cells do not fully differentiate; cell wall thickening
cannot be observed, sieve plates are not formed and the nucleus is retained, resulting in
a reduced translocation rate of phloem sap.
OPS is a positive regulator of
Brassinosteroid signaling pathway as it
positively regulates the key transcription
factors of BR singaling BES1 and BZR1. It
can interact with BRASSINOSTEROID
INSENSITIVE 2 (BIN2), a repressor of the
brassinosteroid signaling pathway and
recruits it to plasma membrane, thus
preventing its inhibitory activity in the
nucleus. Thus, OPS antagonizes BIN2 to
promote phloem diffrentiation.
● The small mobile protein CLAVATA3/EMBRYO SURROUNDING REGION 45 (CLE45) is the
next factor known to be involved in SE differentiation; it is expressed one cell later than OPS.
CLE45 is perceived by the receptor BARELY ANY MERISTEM 3 (BAM3), and its signalling is
further enhanced by MEMBRANE-ASSOCIATED KINASE REGULATOR 5 and CORYNE
(CRN). Exogenous application of CLE45 locks the protoploem SEs in their pre- diffrentiation
state.
● BREVIS RADIX (BRX), a putative repressor of the CLE45/BAM3 signalling pathway,
mediates auxin-brassinosteroid signalling cross talk in the root meristem. Its knock-out mutant
also shows the gap cell phenotype. Interestingly, the phenotypes of brx and ops are additive,
suggesting that these genes have parallel functions in similar processes.
● In recently developed Vascular Cell Induction Culture System Using Arabidopsis leaves
(VISUAL) in which partial SE diffrentiation can be induced in leaf tissue, cell divisions are an
essential step for SE diffrentiation. This culture system identified NAC DOMAIN –
CONTAINING PROTEIN 20 (NAC020) as an important regulator of SE diffrentiation.
● It is thought to act as a repressor genetically upstream of ALTERED PHLOEM (APL), though
results from in vitro and in planta experiments are partially contradictory regarding its mode of
activity. APL was one of the earliest described key regulators of phloem development. It is
necessary for the differentiation of functional SEs and represses xylem identity in the position
where protophloem SEs form.
● In recent years, other NAC-type transcription factors, NAC86 and NAC45, have been
identified as downstream targets of APL. They coordinate the expression of NAC45/86-
DEPENDENT EXONUCLEASE-DOMAIN PROTEIN (NEN) 1, 2 and 4 and the
translocation of NEN1 and NEN2 from the cytosol to the nucleus upon enucleation. Both the
NACs and their downstream targets the NENs are essential for full degradation of the
nucleus.
Phloem as a hub for systemic communication within the root meristem
● The defects in phloem development can have a systemic adverse impact on the root meristem
and root growth as the primary transport of sugar sucrose and the plant hormone auxin have
been shown to be transported over long distances through the phloem and to play roles as
signaling molecules that can change the expression of genes. The mutations in genes
important for phloem development often result in short root phenotypes in addition to altered
SE differentiation.
● In ops, along with gap cells, defects in cell division and elongation during embryogenesis
occurs as cells divide in a position where they normally undergo elongation. Long-distance
transport is impaired, and auxin transport from fully differentiated SEs to immature SEs was
therefore thought to be affected as well. The increase of number of lateral roots observed in
this mutant is due to accumulation of auxin at higher regions due to the impaired long distance
transport.
● Similar phenotypes have been reported in brx, cvp2 cvl1, and CLE45-treated roots.
● More direct experimental evidence also supports the requirement for auxin in SE
development. Upon auxin treatment, BRX promoter activity is induced and the BRX protein
becomes dissociated from the plasma membrane and accumulates in the nucleus, where it
appears to be subject to auxin-induced degradation.
● BRX is thought to be asymmetrically localized in the basal end of the cell similar to the auxin
transporter PIN-FORMED1 and fulllength BRX driven by the PIN1 promoter can fully
rescue the brx short root phenotype. BRX appears to directly interact with the auxin response
factor MONOPTEROS. This supports the notion that BRX at the plasma membrane could act
as a messenger to convey the auxin signal into the nucleus, where initiation of downstream
gene expression takes place.
● The apl mutant and the nac45/nac86 double mutant also display impaired root
growth.
● The PLETHORA (PLT) genes are transcription factors that are downstream of
auxin. They form a gradient in the root meristem, with high PLT levels in
meristematic cells adjacent to the QC, medium levels in transit amplifying cells, and
low levels in differentiating cells. The distribution of the PLT protein results from a
transcriptional gradient and cell-to-cell movement of the protein and was shown to
be responsible for the longitudinal zonation of the root. High concentrations of
the PLTs slow down cell division in the stem cell niche, whereas medium levels
activate mitotic cell divisionwth.
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Phloem diffrentiation

  • 2. Plant vasculature consists of two major conductive cell types, xylem tracheary elements and phloem sieve elements (SEs). Both cell types undergo a highly specialized differentiation process. The phloem is the tissue that translocates the products of photosynthesis from mature leaves to areas of growth and storage, including the roots. Functional phloem consists of sieve elements (SEs) and companion cells (CCs). While SEs are enucleated conducting cells in the phloem, CCs are cells with intact cellular components and are known to support the functioning of SEs. CCs are closely linked to SEs by symplastic connections mediated by plasmodesmata (PD). In addition, phloem tissue contain Phloem parenchyma cells (which store and release food molecules). In some cases the phloem tissue also includes fibers and sclereids (for protection and strengthening of the tissue) and laticifers (latex-containing cells). However, only the sieve elements are directly involved in translocation.
  • 4. Sieve elements in the phloem are the main cells transporting photosynthates from source tissues, such as leaves, towards the parts of the plant where they are consumed, also referred to as sink tissues. The SEs consist of elongated cells with a modified and strengthened cell wall that are connected via sieve plates, specialized cell walls that have many large perforations to enable pressure-driven mass flow.. in addition to the role of phloem as simple pipe for the the mass flow of sucrose phloem sieve elements also plays an important role in mediating long distance communication by transporting signalling molecules such as sucrose hormones peptides proteins and RNAs. SIeve tube elements are present in the angiosperms while relatively less specialised sieve cells are present in the gymnosperms. Each sieve tube element is associated with one or more companion cells. The division of a single mother cell forms the sieve tube element and the companion cell. Numerous plasmodesmata penetrate the walls between sieve tube elements and their companion cells, suggesting a close functional relationship and a ready exchange of solutes between the two cells. CC play a role in the transport of photosynthetic products from producing cells in mature leaves to the sieve elements in the minor (small) veins of the leaf. They are also thought to take over some of the critical metabolic functions, such as protein synthesis, that are reduced or lost during differentiation of the sieve elements.
  • 5. The ontogeny of phloem sieve element along the longitudinal axis of the Arabidopsis root - In the the root of of arabidopsis the root meristem resides at the root tip and consists of the stem cell niche, that contain mitotically less active quiescent centre and the surrounding stem cells. Upon existing this cell division zone cells begin to expand and become committed to a particular cell fate that results in longitudinal zonation pattern. In the Arabidopsis root, phloem initials located close to the quiescent center first divide periclinally, giving rise to protophloem precursors; these precursors then further divide to make protophloem and the neighboring metaphloem initials. Since the two phloem types have very similar structures, distinguishing them can be challenging. The discovery of genes that play a role early in phloem development is therefore a priority to improve our understanding of the regulatory mechanisms by which proto-/meta-phloem cell fate is determined.
  • 6. Sieve elements undergo a specialized differentiation process - Differentiated SEs are generally slender, elongated cells aligned along the longitudinal axis to establish a sieve tube.To facilitate the long-distance transport, SEs undergo a specialized differentiation process. ● Cells entering the differentiation stage undergo cell wall thickening, which gives mechanical support against the high turgor pressure. ● The cells develop perforated walls at the cell junctions within the sieve tube. Through these junctions, called sieve plates, SEs establish symplastic continuity throughout the sieve tube. ● They lose many organelles such as vacuoles, the rough endoplasmic reticulum (ER), and the Golgi apparatus, and their cytoskeleton degenerates. ● However, other cellular components, such as the plasma membrane, smooth ER, mitochondria, phloem plastids and P-proteins (proteinaceous material in the phloem ) , are retained within the cell. ● The enucleation process takes place at the very last stage of differentiation. ● In spite of the degeneration of a majority of their organelles, SEs are still considered living cells; neighboring CCs, to which they are symplastically connected by PD, support the SEs.
  • 7. Molecular mechanism regulating sieve element specification and differentiation Overview of protophloem SE differentiation within the root meristem of Arabidopsis thaliana. 4 zones in the root tip can be distinguished: Meristem, Transition, Elongation and Differentiation. The protophloem SE cell file is fully differentiated before the end of the transition zone as shown in the enlargement. The timing of differentiation progress has not been investigated yet, thus indicated zones within the SE cell stand are approximations. The first cell of the expression domains of known SE regulators is indicated with arrow heads. The yellow and red cell mark the first and second periclinal cell division, respectively. The transit amplifying cells divide several times anticlinally. The differentiating cells elongate and undergo cell wall thickening, sieve plate morphogenesis and autolysis. The green cell is enucleating.
  • 8. A number of genes are involved in phloem development : • The subclade 2 of the SUPRESSOR OF MAX2-LIKE (SMXL) genes, namely SMXL3, SMXL4 and SMXL5, play redundantly a major role in early protophloem development. The combinatorial double mutants of these three genes show strongly reduced root growth while the smxl3 smxl4 smxl5 triple mutant is seedling lethal. The smxl4 smxl5 mutant revealed lack of distinct cellular changes of protophloem cells, e.g. enucleation does not occur resulting in reduced phloem sap transport . • Another gene that acts is OCTOPUS (OPS). The OPS protein is polarly localized in shootward plasma membrane. In the ops knockout mutant protophloem cells do not fully differentiate; cell wall thickening cannot be observed, sieve plates are not formed and the nucleus is retained, resulting in a reduced translocation rate of phloem sap.
  • 9. OPS is a positive regulator of Brassinosteroid signaling pathway as it positively regulates the key transcription factors of BR singaling BES1 and BZR1. It can interact with BRASSINOSTEROID INSENSITIVE 2 (BIN2), a repressor of the brassinosteroid signaling pathway and recruits it to plasma membrane, thus preventing its inhibitory activity in the nucleus. Thus, OPS antagonizes BIN2 to promote phloem diffrentiation.
  • 10. ● The small mobile protein CLAVATA3/EMBRYO SURROUNDING REGION 45 (CLE45) is the next factor known to be involved in SE differentiation; it is expressed one cell later than OPS. CLE45 is perceived by the receptor BARELY ANY MERISTEM 3 (BAM3), and its signalling is further enhanced by MEMBRANE-ASSOCIATED KINASE REGULATOR 5 and CORYNE (CRN). Exogenous application of CLE45 locks the protoploem SEs in their pre- diffrentiation state. ● BREVIS RADIX (BRX), a putative repressor of the CLE45/BAM3 signalling pathway, mediates auxin-brassinosteroid signalling cross talk in the root meristem. Its knock-out mutant also shows the gap cell phenotype. Interestingly, the phenotypes of brx and ops are additive, suggesting that these genes have parallel functions in similar processes. ● In recently developed Vascular Cell Induction Culture System Using Arabidopsis leaves (VISUAL) in which partial SE diffrentiation can be induced in leaf tissue, cell divisions are an essential step for SE diffrentiation. This culture system identified NAC DOMAIN – CONTAINING PROTEIN 20 (NAC020) as an important regulator of SE diffrentiation.
  • 11. ● It is thought to act as a repressor genetically upstream of ALTERED PHLOEM (APL), though results from in vitro and in planta experiments are partially contradictory regarding its mode of activity. APL was one of the earliest described key regulators of phloem development. It is necessary for the differentiation of functional SEs and represses xylem identity in the position where protophloem SEs form. ● In recent years, other NAC-type transcription factors, NAC86 and NAC45, have been identified as downstream targets of APL. They coordinate the expression of NAC45/86- DEPENDENT EXONUCLEASE-DOMAIN PROTEIN (NEN) 1, 2 and 4 and the translocation of NEN1 and NEN2 from the cytosol to the nucleus upon enucleation. Both the NACs and their downstream targets the NENs are essential for full degradation of the nucleus.
  • 12. Phloem as a hub for systemic communication within the root meristem ● The defects in phloem development can have a systemic adverse impact on the root meristem and root growth as the primary transport of sugar sucrose and the plant hormone auxin have been shown to be transported over long distances through the phloem and to play roles as signaling molecules that can change the expression of genes. The mutations in genes important for phloem development often result in short root phenotypes in addition to altered SE differentiation. ● In ops, along with gap cells, defects in cell division and elongation during embryogenesis occurs as cells divide in a position where they normally undergo elongation. Long-distance transport is impaired, and auxin transport from fully differentiated SEs to immature SEs was therefore thought to be affected as well. The increase of number of lateral roots observed in this mutant is due to accumulation of auxin at higher regions due to the impaired long distance transport.
  • 13. ● Similar phenotypes have been reported in brx, cvp2 cvl1, and CLE45-treated roots. ● More direct experimental evidence also supports the requirement for auxin in SE development. Upon auxin treatment, BRX promoter activity is induced and the BRX protein becomes dissociated from the plasma membrane and accumulates in the nucleus, where it appears to be subject to auxin-induced degradation. ● BRX is thought to be asymmetrically localized in the basal end of the cell similar to the auxin transporter PIN-FORMED1 and fulllength BRX driven by the PIN1 promoter can fully rescue the brx short root phenotype. BRX appears to directly interact with the auxin response factor MONOPTEROS. This supports the notion that BRX at the plasma membrane could act as a messenger to convey the auxin signal into the nucleus, where initiation of downstream gene expression takes place.
  • 14. ● The apl mutant and the nac45/nac86 double mutant also display impaired root growth. ● The PLETHORA (PLT) genes are transcription factors that are downstream of auxin. They form a gradient in the root meristem, with high PLT levels in meristematic cells adjacent to the QC, medium levels in transit amplifying cells, and low levels in differentiating cells. The distribution of the PLT protein results from a transcriptional gradient and cell-to-cell movement of the protein and was shown to be responsible for the longitudinal zonation of the root. High concentrations of the PLTs slow down cell division in the stem cell niche, whereas medium levels activate mitotic cell divisionwth.