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Virtual Aorta: Artificial
Intelligence
for Diagnostic Predictors
of Aortic Disorders
Clinical and Research Computational Tools
Andy Donald, Niamh Hynes
Our Vision
Industry Partnerships
Imaging Analytic Tools, Intelligent
Predictors
To Reduce Aortic Death
Diagnostic Errors with Lethal Outcomes
167,000
People lose their
life to Aortic
Disease
every year
50%
Patients with Aortic
Dissection are
misdiagnosed
33%
Actively treated for
the wrong condition
11%
Maternal deaths
from cardiovascular
causes are due to
Aortic Dissection
Aortic Dissection is a time-critical medical emergency with
an 80% survival rate when diagnosed and treated on
time
Imaging Acquisition to Analysis Mismatch
• A Radiologist working 8hours/day, has 2-3 seconds to review and report images
• 1 in 25 of all radiological diagnosis are errors
• Increasing Work pace increases error rate up to 30%
Radiology Quality Initiative 2012, Berlin 2007
Sokolovskaya et al. 2015
Aortic Disease: Life-long Effects
Randall R. DeMartino. Circulation: Cardiovascular Quality and Outcomes. Population-Based Assessment of the Incidence of Aortic Dissection, Intramural Hematoma, and Penetrating
Ulcer, and Its Associated Mortality From 1995 to 2015, Volume: 11, Issue: 8, DOI: (10.1161/CIRCOUTCOMES.118.004689)
• More than double the mortality rate of age matched
controls at 5-, 10- and 20-years post AD
• Two-to threefold increased risk of non-aortic CV
death, any first-time nonfatal CV event, and first-time
Heart Failure
• 80% that survive the initial acute aortic event
continue to have a substantial risk of aortic death,
any aortic event, aortic intervention, and first-time
diagnosis of aortic aneurysm
• Cardiovascular (CV) deaths have fallen over the last
two decades, but the incidence of AD has not fallen.
Aortic Disease is Expensive
“The median and total yearly costs to treat thoracic
aortic dissections, as well as the total yearly
costs to treat thoracic aortic aneurysms, have
increased beyond the rate of inflation”
“Factors attributed to thoracic aortic dissection costs
are likely to continue in an upward trajectory….
• Increased incidence of disease
• Operative success in historically nonoperative
patients
• Evidence‐directed endografting for type B
dissection patients historically managed
medically”
Life long Surveillance with cross-sectional imaging
Surveillance of the Wrong Parameter
CT Data
Dynamic MRI Data
Static 2D Aortic Diameter 5.5cm vs. Dynamic Wall Stress, Strain, Pressure and Velocity
Chronic Inflammatory Disease
The Team
Multidisciplinary and Multi-institutional Team
Prof Osama Soliman
Director CORRIB Core Lab
Consultant Cardiologist
Prof Sherif Sultan
Director Western Vascular
Institute
Consultant Vascular Surgeon
Niamh Hynes
Principal Investigator
Vascular Surgeon
Scientist
CORE TEAM
COLLABORATORS
Prof Mark Field
Lead Cardiac Aortic Surgeon
Liverpool Heart and Chest
Hospital
Prof Francesco Torella
Lead Vascular Aortic Surgeon
Liverpool Heart and Chest
Hospital
Dr Ted Vaughan
BioEngineering,
University of IGalway
Prof Santi Trimarchi
IRCCS Policlinico San Donato,
Cardiovascular Center, Milan,
Italy.
Andy Donald
Computer Science/Bioinformatics
University of Galway
Ihsan Ullah
Assistant Professor
INSIGHT Centre for data Analytics,
University of Galway
Clinical Partners
• 1/3 of the land mass of Ireland.
• 1 million people in catchment
area
• 7 Hospitals
• 1,961 beds
• 15.4 % older population
compared to 13.4% nationally
• Italian Based International Registry
• Anonymized clinical data and
images
• Largest UK Aortic Centres
• 1000s Complex Aortic Surgeries
annually
Chronic Inflammatory Disease
The Project
Aortic Segmentation Morphological Analysis
WP3: Manual Segmentation
Ground Truth
WP1: Data Cleaning
Set up Cloud-based Image
Repository WP2: eCRF Construction
International Online Aortic Dissection Registry
WP4: Deep Learning
WP6: External Validation
WP5: Big Data Analysis
Development of in silico test beds and diagnostics
Surrogate
Modelling
Big Data
Synthesis
In Silico
Test beds
Test Bed
Validation
Diagnostics
Medical
Devices
The Solution
Artificial Intelligence Improves Aortic Surveillance
• AI assistance reduced radiologist’s
reporting time for aneurysm follow-up by
63%
Rueckel J, Reidler P, Fink N, Sperl J, Geyer T, Fabritius MP, Ricke J, Ingrisch M, Sabel BO. Artificial intelligence assistance
improves reporting efficiency of thoracic aortic aneurysm CT follow-up. Eur J Radiol. 2021 Jan;134:109424. doi:
10.1016/j.ejrad.2020.109424. Epub 2020 Nov 21. PMID: 33259990.
Aortic Aneurysm
Aortic Dissection
Aortic Prediction of
Re-Intervention
Aortic Surveillance Within the Cloud
• Three main areas of focus for cloud services
• Storage • Compute • Transfer &
Security
Cloud Storage Challenges
Main data source consists of CT scans (150 3D
images each approx. 950GB each)
Multiple Data types
Computational Modelling outputs
(Structured dataset)
Data Analytics outputs
AWS Glacier
AWS S3
Data Lake
AWS S3
Data Lake
Cloud Compute Challenges
Computational Modelling Vs Surrogate Modelling
• The aim of this project is to model the blood flow in aorta
which has been conventionally using the finite element
computational modelling methods.
• However, these methods can be computationally
exhaustive and time consuming and may not be able to
produce predictions in real time essential for diagnostic
purposes.
• Necessary to introduce a surrogate model to emulate this
computational model for real time diagnosis.
• Surrogate models are built by:
• Sampling the output from the computational modelling
• Building and evaluating outputs
• Active learning
• Re-sampling
Computational
Modelling
Output
Surrogate
Modelling
Sampling
Model
Construction
Active
Learning
Model
Deployment
Cloud Security & Data Transfer Architecture
Security is extremely important as data comes from Patient CT scans. Access
to the data requires defined permissions and identities via AWS security
services.
PREVENT
Detection of any security issues via monitoring and logging services in AWS
DETECT
SECURE TRANSFER
Usage of the AWS Transfer Family in order to transfer data to AWS Storage services
Deliverables
• Databases: Formatted Clinical and Image Repository
• Constitute data sets for further projects (Research
Repository)
• Form the Basis for Prospective International Aortic
Registry
• AI tools for Clinicians for rapid diagnosis and stent-graft
sizing
• AI tools for Research which form the basis for in silico
testbeds
• Risk Scores Tools to predict patients at risk of aortic
events and optimise patient selection for intervention
The End Result
Thank You!

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01-09 The Virtual Aorta project - Hynes.pdf

  • 1. Virtual Aorta: Artificial Intelligence for Diagnostic Predictors of Aortic Disorders Clinical and Research Computational Tools Andy Donald, Niamh Hynes
  • 2. Our Vision Industry Partnerships Imaging Analytic Tools, Intelligent Predictors To Reduce Aortic Death
  • 3. Diagnostic Errors with Lethal Outcomes 167,000 People lose their life to Aortic Disease every year 50% Patients with Aortic Dissection are misdiagnosed 33% Actively treated for the wrong condition 11% Maternal deaths from cardiovascular causes are due to Aortic Dissection Aortic Dissection is a time-critical medical emergency with an 80% survival rate when diagnosed and treated on time
  • 4. Imaging Acquisition to Analysis Mismatch • A Radiologist working 8hours/day, has 2-3 seconds to review and report images • 1 in 25 of all radiological diagnosis are errors • Increasing Work pace increases error rate up to 30% Radiology Quality Initiative 2012, Berlin 2007 Sokolovskaya et al. 2015
  • 5. Aortic Disease: Life-long Effects Randall R. DeMartino. Circulation: Cardiovascular Quality and Outcomes. Population-Based Assessment of the Incidence of Aortic Dissection, Intramural Hematoma, and Penetrating Ulcer, and Its Associated Mortality From 1995 to 2015, Volume: 11, Issue: 8, DOI: (10.1161/CIRCOUTCOMES.118.004689) • More than double the mortality rate of age matched controls at 5-, 10- and 20-years post AD • Two-to threefold increased risk of non-aortic CV death, any first-time nonfatal CV event, and first-time Heart Failure • 80% that survive the initial acute aortic event continue to have a substantial risk of aortic death, any aortic event, aortic intervention, and first-time diagnosis of aortic aneurysm • Cardiovascular (CV) deaths have fallen over the last two decades, but the incidence of AD has not fallen.
  • 6. Aortic Disease is Expensive “The median and total yearly costs to treat thoracic aortic dissections, as well as the total yearly costs to treat thoracic aortic aneurysms, have increased beyond the rate of inflation” “Factors attributed to thoracic aortic dissection costs are likely to continue in an upward trajectory…. • Increased incidence of disease • Operative success in historically nonoperative patients • Evidence‐directed endografting for type B dissection patients historically managed medically” Life long Surveillance with cross-sectional imaging
  • 7. Surveillance of the Wrong Parameter CT Data Dynamic MRI Data Static 2D Aortic Diameter 5.5cm vs. Dynamic Wall Stress, Strain, Pressure and Velocity
  • 9. Multidisciplinary and Multi-institutional Team Prof Osama Soliman Director CORRIB Core Lab Consultant Cardiologist Prof Sherif Sultan Director Western Vascular Institute Consultant Vascular Surgeon Niamh Hynes Principal Investigator Vascular Surgeon Scientist CORE TEAM COLLABORATORS Prof Mark Field Lead Cardiac Aortic Surgeon Liverpool Heart and Chest Hospital Prof Francesco Torella Lead Vascular Aortic Surgeon Liverpool Heart and Chest Hospital Dr Ted Vaughan BioEngineering, University of IGalway Prof Santi Trimarchi IRCCS Policlinico San Donato, Cardiovascular Center, Milan, Italy. Andy Donald Computer Science/Bioinformatics University of Galway Ihsan Ullah Assistant Professor INSIGHT Centre for data Analytics, University of Galway
  • 10. Clinical Partners • 1/3 of the land mass of Ireland. • 1 million people in catchment area • 7 Hospitals • 1,961 beds • 15.4 % older population compared to 13.4% nationally • Italian Based International Registry • Anonymized clinical data and images • Largest UK Aortic Centres • 1000s Complex Aortic Surgeries annually
  • 12. Aortic Segmentation Morphological Analysis WP3: Manual Segmentation Ground Truth WP1: Data Cleaning Set up Cloud-based Image Repository WP2: eCRF Construction International Online Aortic Dissection Registry WP4: Deep Learning WP6: External Validation WP5: Big Data Analysis
  • 13. Development of in silico test beds and diagnostics Surrogate Modelling Big Data Synthesis In Silico Test beds Test Bed Validation Diagnostics Medical Devices
  • 15. Artificial Intelligence Improves Aortic Surveillance • AI assistance reduced radiologist’s reporting time for aneurysm follow-up by 63% Rueckel J, Reidler P, Fink N, Sperl J, Geyer T, Fabritius MP, Ricke J, Ingrisch M, Sabel BO. Artificial intelligence assistance improves reporting efficiency of thoracic aortic aneurysm CT follow-up. Eur J Radiol. 2021 Jan;134:109424. doi: 10.1016/j.ejrad.2020.109424. Epub 2020 Nov 21. PMID: 33259990. Aortic Aneurysm Aortic Dissection Aortic Prediction of Re-Intervention
  • 16. Aortic Surveillance Within the Cloud • Three main areas of focus for cloud services • Storage • Compute • Transfer & Security
  • 17. Cloud Storage Challenges Main data source consists of CT scans (150 3D images each approx. 950GB each) Multiple Data types Computational Modelling outputs (Structured dataset) Data Analytics outputs AWS Glacier AWS S3 Data Lake AWS S3 Data Lake
  • 18. Cloud Compute Challenges Computational Modelling Vs Surrogate Modelling • The aim of this project is to model the blood flow in aorta which has been conventionally using the finite element computational modelling methods. • However, these methods can be computationally exhaustive and time consuming and may not be able to produce predictions in real time essential for diagnostic purposes. • Necessary to introduce a surrogate model to emulate this computational model for real time diagnosis. • Surrogate models are built by: • Sampling the output from the computational modelling • Building and evaluating outputs • Active learning • Re-sampling Computational Modelling Output Surrogate Modelling Sampling Model Construction Active Learning Model Deployment
  • 19. Cloud Security & Data Transfer Architecture Security is extremely important as data comes from Patient CT scans. Access to the data requires defined permissions and identities via AWS security services. PREVENT Detection of any security issues via monitoring and logging services in AWS DETECT SECURE TRANSFER Usage of the AWS Transfer Family in order to transfer data to AWS Storage services
  • 20. Deliverables • Databases: Formatted Clinical and Image Repository • Constitute data sets for further projects (Research Repository) • Form the Basis for Prospective International Aortic Registry • AI tools for Clinicians for rapid diagnosis and stent-graft sizing • AI tools for Research which form the basis for in silico testbeds • Risk Scores Tools to predict patients at risk of aortic events and optimise patient selection for intervention