Mycovirus: virus that infects and replicates in fungi .
They are also known as fungal virus, mycophages and virus like particles(VLPs) .
During 1970s, hypovirulence in chestnut blight (Cryphonectria parasitica) led to the discovery of mycoviruses in plant pathogenic fungi.
4. INTRODUCTION
(Ghabrial and Suzuki, 2009)
7/6/2019 4
• Mycovirus : virus that infects and replicates in fungi
• They are also known as fungal viruses/mycophages
• Mycovirology : branch involved in study of viruses infecting
fungi
5. HISTORY
The first mycovirus was reported by Hollings in 1962 from
the cultivated mushroom (Agaricus bisporus) , that was later
known as La France disease or watery stripe disease.
Borodynko et al., concluded that La France disease was
caused by dsRNA virus i.e. La France isometric virus (LFIV)
(Son et al., 2015)
7/6/2019 5
6. GENERAL CHARACTERISTICS
25-50 nm diameter, Isometric particles
Particle weight from 6-13 x 106 Daltons
dsRNAgenomes and 30% +ssRNA
genomes.
A gemini virus-related DNA mycovirus
was also reported :i.e.,
Sclerotinia sclerotiorum hypovirulence
associated DNA virus 1 (SsHADV-1).
(Son et al., 2015)
7/6/2019 6
10. 7/6/2019 10
ssRNA replicon of
prokaryotic origin
Self
replicating
cellular
mRNA
Simple ssRNA
Virus
progenitor
RF
Totiviruses
Totiviruses
RF
RF
Acquire
coatprotein and
package
dsRNA/RDRP into
virions
package
RDRP into
virions
ssRNAViruses
RF
Hypoviruses
Partiviruses
La France Isometricviruses
Agaricusbisporusvirus1
Acquire genes f
pathogenicity
Coat protein
and RDRP genes
on separate
segments
Package RDRP
in virions
Loss of genes
non essential
for survival
Loss of coat
protein and
gene
rearrangement
Enclose
dsRNA/RDR
P in host
vesicles
Acquire
coatprotei
n
PossibleEvolutionarypathwaysof Mycovirusevolution
Said A. Ghabrial et al., (1998)
11. HOW DID MYCOVIRUSES EVOLVE??.
There are two major hypotheses which explain the
evolution of mycoviruses
Plant virus hypothesis
Ancient coevolution
hypothesis
Evolutionary Hypotheses of
mycovirus
(Son et al., 2015)
7/6/2019 11
12. i. Ancient coevolution hypothesis: The association
between mycoviruses and fungi is ancient and reflects
long term coevolution
Buck stated that most of the “mycoviruses evolved at a
very early stage in the phylogeny of their hosts”
i. Plant virus hypothesis: Mycoviruses originated from
plant viruses i.e., the original mycovirus was a plant
virus that moved from plant to fungus within the same
host plant
(Son et al., 2015)
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13. Use of host machinery
1. Thirty chromosomal host genes
needed for replication of killer
viruses in Saccharomyces
cerevisiae (Wickner 1996)
2. Use of host-encoded enzymes for
processing the capsid protein of
Helminthosporium victoriae virus
190S (Huang et al ., 1997)
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14. Plant virus hypothesis
1. Evidence in support of this hypothesis has come
from sequence comparisons between mycoviruses and
plant viruses.
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(Chu et al ., 2002; Linder-Basso et al ., 2005).
• CHV-CryphonectriaHypoVirus
• FgV- Fusarium graminarium
Virus
• BaMMV- Barley Yellow
Mosaic Virus
15. 2. Howitt et al. (2006) :
GVA – Garlic Virus A, GVX – Garlic Virus x, GVE – Garlic Virus E, BVX – Botrytis Virus X
15
GVX
GARLIC
GVA
GVX
GVE
BVX
B. cinerea
3. Although a small number of fungal species are known
to be vectors of plant viruses, the virions are carried on
the outside of the fungus and it is possible that a rare
event may have led to their internalization (Varga et al .,
2003).
18. TRANSMISSIONOF MYCOVIRUSES
Intercellular transmission of mycoviruses is mainly by
two ways:
i. Horizontally via protoplasmic fusion (Hyphal
anastomosis)
ii. Vertically by sporulation
Transmission by anastomosis Transmission by spores
(Kumar et al.,2016)
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19. MOVEMENTOF MYCOVIRUSES WITHINFUNGI
• Virus dissemination in mycelial networks via septa
• They move forward by plasma streaming and extend into
new hyphae.
(Son et al.,2015)
7/6/2019 19
20. Mycoviruses can alter phenotypes of infected fungi, such
as reduced growth, pigmentation and lack of sporulation.
Latent and persistent infections.
7/6/2019 Cho et al. 2012
A- Virus free colony B- Virus infected colony
Fusarium graminearum virus 1-DK21 infection
IMPACT ON HOST PHENOTYPE
21. Phenotypic effects
Advantageous effects Deleterious effects
(Son et al., 2015)
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1. Hypovirulence
2. Diseases :
La France’ disease of Agaricus bisporus
d² - Ophiostoma ulmi
1. Killer strains
2. Thermostat :
Curvularia thermal
tolerance virus (CThTV)
The mycoviruses confer a range of phenotypes in their fungal
hosts, both advantageous and deleterious, but many of them
appear Cryptic.
22. 7/6/2019 22
KILLER STRAINS
Some strains of S. cerevisiae and Ustilago maydis (corn smut
fungus) secrete extracellular toxins that either kill or suppress
the growth of same or related fungal species but each killer
strain is immune to its own toxin.
PAUL A. ROWLEY, 2016
24. HYPOVIRULENCE
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24
Hypovirulence is the advantageous infection of viruses
which decrease the pathogenicity of plant pathogenic
fungi.
“Will the blight end the chestnut?
The farmers rather guess not. It keeps smolderingat the
roots And sending up newshoots Till another parasite Shall
come to end the blight.”
- Robert Frost
25. •Chestnut cankers were first reported in US
in 1904 on American chestnut trees.
•By 1950, the blight had devasted 9 million
acres of forests by killing several billion
American chestnut trees.
•During 1965, “Jene Grente” reported
hypovirulent strains of the blight fungus
from Italy and use of these strains in a
successful biological control of chestnut
blight.
(Kumar et al.,2016)
7/6/2019 25
Hypovirulence against Cryphonectria parasitica
( Chestnut blight)
26. Mechanism of hypovirulence
The mechanism of hypovirulence is still not clear, but
various hypothesis were given by different workers, such as
RNA silencing of the fungus and counter silencing
mechanism by the hypovirus (Nuss,2011)
There are various other mechanisms, which are reported
such as mitochondrial mutations and nuclear mutations have
been or may be associated with hypovirulence.
7/6/2019 26
The mechanism of hypovirulence is still not clear, but
various hypothesis were given by different workers, such
as
Possible interference of virus infection with G-protein
signalling(Nuss, 1996)
Different elements of signal transduction, mostly those
involving kinase proteins (Kim et al., 2006).
RNA silencing of the fungus by the hypovirus (Nuss,
2011)
27. 7/6/2019 27
Fungus Disease
Virus
Genus
Mangaporthe oryzae Rice blast MoV1 and MoV2 Totivirus
Rhizoctonia solani Sheath blight
Rhizoctonia virus
M2
Mitovirus
Sclerotinia sclerotiorum White mold SsDRV Alfaflexivirus
Cryphonectria parasitica Chestnut blight CHV1 Hypovirus
Ophiostoma novo-ulmi Dutch Elm disease
Ophiostoma
mitovirus
Mitovirus
Diaporthe ambigua Canker on Rosaceae DaRV Carmovirus
Fusarium graminearum Head blight
Fusarium poae
virus
Partitivirus
Botrytis cinerea Grey mold BVF and BVX Mycoflexivirus
Yadav et al., (2015)
FUNGAL PATHOGENS AND THEIR ASSOCIATED MYCOVIRUSES
28. The advantages of using mycoviruses in fungal
disease management
Once hypovirulence-associated mycoviruses are
transmitted to a virulent fungal strain, they quickly
inhibit lesion extension
The fitness of a hypovirulent strain on crop plants is
not likely to be a problem
Hypovirulent strains share a similar niche with
virulent strains and so hypovirulent strains can grow
well on hosts
(Xie et al., 2014)
7/6/2019 28
29. The disadvantage of using mycoviruses to control fungal
diseases of crop
Vegetative incompatibility operates widely in filamentous
fungi, which restricts the transmission of virulence-
attenuating hypoviruses in the fungus
(Xie et al., 2014)
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30. Objective: To investigate the effect of mycovirus FodV1 on the plant
colonization pattern of its fungal host
CASE STUDY 1
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31. External colonization of carnation roots by the virus-free (V−)
and the virus-infected (V+) GFP-strains of Fusarium oxysporum f.
sp. dianthi isolate 77
(Torres-Trenas et al., 2019)
7/6/2019 31
External colonization of carnation roots by the virus-free (V−) and the virus-
infected (V+) GFP-strains of Fusarium oxysporum f. sp. dianthi isolate 77. (A,B)
Superficial colonization of adventitious roots by the virus-free (A) and the virus-
infected (B) strains showing single and germinating conidia (arrowed). (C) Event
of penetration of the root epidermis cells showing the formation of apressoria (ap)
on the cell surface, and haustoria (ha) inside the epidermal cell. Scale bar = 50
32. Colonization of the root crown by the virus-free (V−) and the
virus-infected (V+) GFP- strains of F. oxysporum f. sp. dianthi
isolate 77
(Torres-Trenas et al., 2019)
7/6/2019 32
(A) Longitudinal and (C) transversal root crown sections of plants inoculated
with the virus-free strain V− (green) 14 days after inoculation. (B)
Longitudinal and (D) transversal root crown sections of plants inoculated with
the virus-infected strain V+ (green) 21 days after inoculation. Scale bar = 50
33. Internal colonization of stem internodes after inoculation of carnation plants with the
virus-free (V−) and the virus-infected (V+) GFP-strains of F. oxysporum f. sp. dianthi
isolate 77
(Torres-Trenas et al., 2019)
7/6/2019 33
Transversal sections of the internodes (I) were obtained at 14, 21, 28, and 35
days post inoculation (dpi).presence of hyphae and colonization patterns were
detected. Arrows indicate the presence of hyphae (green). vt, vascular tissue.
34. Objective: To demonstrate extracellular transmission of SsHADV-1 and its use
in biological control of Sclerotinia sclerotiorum stem rot disease in Rapeseed
CASE STUDY 2
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35. Extracellular application of purified particles of
SsHADV-1 to intact hyphae of Sclerotinia sclerotiorum
grown on PDA plates
(Yu et al., 2012)
7/6/2019 35
(A) Sectoring in a colony of strain Ep-1PNA367 at 2 dpi (B) Colony morphology of newly
infected strain Ep-1PNA367; colony morphology of the virus-free stain Ep-1PNA367 and the
virus-infected strain DT-8 (C) Electrophoretic profiles of genomic DNA extracted from the
cultures shown in B are shown Lane M: λ-Hind III-digested DNA marker. Lanes 1–3, DNA
samples of isolates Ep-1PNA367, virus infected Ep-PNA367, and strain DT-8, respectively.
36. 7/6/2019 36
(A) Four isolates cultured on the same potato dextrose agar (PDA) plate showing
incompatibility reaction zones. One randomly selected isolate (RL6) was dual-cultured in one
PDA plate to show compatible reaction. (B) Suppression of S. sclerotiorum (strain Ep-
1PNA367) lesion development on detached Arabidopsis thaliana leaves previously treated
with virus particles and isolation of virus-infected colonies from such abnormal lesions. The
wildtype strain and virus-infected isolates were incubated on PDA plates for 7 d at 20 °C. (C)
Lanes 1 and 2; 3 and 4; 5 and 6; and 7 and 8 indicate the wild-type and virus-infected isolates
37. (Yu et al., 2012)
7/6/2019 37
At 8dpi,pathogengrowth extended to the stem of PBSbuffer-treated plants. Although pathogen
growth might rarely extend to the stem of virus-treated plants, only small lesions on the stem could
be observed, and all plants remained standing and were not killed. Weakened inoculated leaves of
virus-treated plantsand detached. At 12 dpi, only three of 16 virus-treated plants were killed by S.
sclerotiorum, but all PBS-treated plants were killed. The therapeutic activity of SsHADV-1 is
comparable to that of Carbendazim, a widely used fungicide. At 15 dpi, only two of eight
Suppression of lesion expansion induced by sclerotinia
sclerotiorum by the application of SsHADV-1
38. CONCLUSION
The majority of mycoviruses have dsRNA genome and 20% of
mycoviruses have +ss RNA genome and are prevalent in major
phyla of fungal kingdom
The mycoviruses confer a wide range of phenotypic effects on
their host ranging from deleterious diseases to beneficial killer
strains and thermal tolerance.
Co-evolution and Plant virus hypothesis suggest their
evolutionary pathways which is still a matter of mystery
Hypovirulence, an important phenomenon that forms the basis
for exploration of these mycoviruses for biological control.
Many economically important plant pathogenic fungi have
been reported to have mycoviruses which requires further
studies for their successful role in biological control.
The success of Mycoviruses in biological control is limited due
to limited mode of transmission i.e., Hyphal anastomosis.
7/6/2019 38
39. Future Prospects
Molecular mechanisms of host-mycovirus interactions.
As genome sequences become available our understanding
of phylogenetic relationships and ultimately mycovirus
evolution will improve.
Perhaps the biggest opportunity for mycovirus research is to
develop them further as biocontrol agents, to assist in the
control of plant pathogens.
a complementary approach to biological control might be the
use of mycoviruses as gene vectors
7/6/2019 39
40. References
• Hollings, M. (1962) Viruses associated with dieback disease of cultivated mushrooms. Nature, 196,
962–965.
• Buck, K.W. (1986). Fungal virology-an overview. In:Buck KW (ed) Fungal virology. CRC Press,
Florida, pp 1–84.
• Ghabrial, S. (1998) Origin, adaptation and evolutionary pathways of fungal viruses. Virus Genes, 16,
119–131
• Koonin, E.V., Choi, G.H., Nuss, D.L., Shapira, R. and Carrington, J.C. (1991) Evidence for common
ancestry of a chestnut blight hypovirulence‐associated double‐stranded RNA and a group of
positive‐strand RNA plant viruses. Proc. Natl. Acad. Sci. USA, 88, 10647–10651.
• Nuss, D.L. (1992) Biological control of chestnut blight: an example of virus‐mediated attenuation of
fungal pathogenesis. Microbiol. Rev. 56, 561–576.
• Howitt, R., Beever, R.E., Pearson, M.N. and Forster, R.L. (1995). Presence of double-stranded RNA
and virus like particles inBotrytis cinerea.Mycolog. Res.,99: 14721478.
• Wickner, R.B. (1996) Double‐stranded RNA viruses of Saccharomyces cerevisiae. Microbiol. Rev.
60, 250–265.
• Varga, J., Toth, B. and Vagvolgyi, C. (2003) Recent advances in mycovirus research. Acta.
Microbiol. Immunol. Hung. 50, 77–94
• Hillman, B.I. and Suzuki, N. (2004) Viruses of the chestnut blight fungus, Cryphonectria parasitica.
Adv. Virus Res. 63, 423–472
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41. • Xie, J., Wei, D., Jiang, D., Fu, Y., Li, G., Ghabrial, S. and Peng, Y. (2006)
Characterization of debilitation‐associated mycovirus infecting the
plant‐pathogenic fungus Sclerotina sclerotorium. J. Gen. Virol. 87, 241–249.
• Ghabrial, S.A. (1994). New developments in fungal virology. Adv. Virus Res.,43 : 303-
308.
• Hillman, B.I. and Suzuki, N. (2004). Viruses of the chestnut blight fungus,
Cryphonectria parasitica. Adv. Virus Res.,63: 423-472.
• Pearson, M.N., Beever, R.E., Boine, B. and Arthur, K. (2009). Mycovirus of filamentous
fungi and their relevance to plant pathology. Mol. Pl. Pathol., 10 : 11-23.
• Borodynko, N., Jaroszewska, B.H., Rymelska, N. and Pospieszny, H. (2010). La France
disease of the cultivated mushroom Agaricus bisporus in Poland. Acta Virologica, 54(3)
: 217-219.
• Xie, J., Jiang, D., 2014. New insights into mycoviruses and exploration for the
biological control of crop fungal diseases. Annu. Rev. Phytopathol. 52, 45–68.
• Abbas A (2016) A Review Paper on Mycoviruses. J Plant Pathol Microbiol 7: 390.
• Vijay kumar and Sunita chandel (2016) Mycoviruses and their role in biological control
of plant diseases. International journal of plant sciences. 11, 375-382.
7/6/2019 41
Mycoviruses are both harmful and beneficial. First mycovirus was identified by Hollings in 1962 on diseased mushrooms sporophores. Mycoviruses are harmful, when they are infecting the mushroom and cause the various diseases of mushrooms such as La France disease and browning etc. Mycoviruses causes reduction in yield, slow mycelial growth, water logging of tissue, malformation, miss sharpened mushroom and reduces the market value of the mushrooms. Borodynko et al. (2010) studied La France disease of the cultivated mushroom Agaricus bisporus in Poland. He concluded that La France disease was caused by dsRNA virus i.e. La France isometric virus (LFIV) and exhibiting a wide range of the disease symptoms including premature veil opening, brown coloured mushrooms, and loss of crop yield. Similarily, the brown discoloration of fruiting body of Flammulina velutipes caused by a mycovirus F. velutipes browning virus (FvBV); which reduces the market value of the mushroom (Magae and Sunagawa, 2010).
i.e, Sclerotinia sclerotiorum hypovirulence associated DNAvirus 1
et al
., 2005). The 8th ICTV report on virus taxonomy (Fauquet
et al
., 2005) lists > 90 mycovirus species covering ten viral families, with
c
. 20% of these still unassigned to a genus or in some cases family (Table 1). Although most of those assigned to date are isometric, a variety of other particle morphologies have been observed, including rigid rods, flexuous rods, club-shaped particles, enveloped bacilliform particles and even an example of a herpesvirus-like virus (Kazama and Schornstein, 1972). The paucity of nucleic acid sequence data for many of these makes it difficult to assign them confidently to established virus groups. In addition, there are
numerous reports of apparently unencapsidated dsRNAs in fungi
mycoviruses located in the mitochondria of fungi adapted to their environment by using the mitochondrial genetic code for translatioAbout 30 chromosomal genes, termed MAK genes (for maintenance of killer), are required for stable replication of the satellite M dsRNA (31). Only three of these MAK genes are necessary for the helper virus (ScV-L-A) multiplication. Mutants defective in any of 20 MAK genes show a decreased level of free 60S ribosomal subunits. Since the mak mutations affecting 60S subunit levels are known to be suppressed by ski mutations and since the latter are now known to act by blocking translation of nonpolyadenylated mRNAs, the level of 60S ribosomal subunits is believed to be also critical for translation of nonpolyadenylated mRNAs
The Hv190S totivirus that infects the plant pathogenic fungus Helminthosporium victoriae, utilizes host-encoded proteins (a protein kinase and a protease) for posttranslational modi®cation of its CP. Phosphorylation and proteolytic processing of CP may play a role in regulating transcription and the release of () strand transcripts from virions (8,32). Hypoviruses (members of the family Hypoviridae) that infect the chestnut blight fungus have little or no effect on fungal growth but attenuate virulence by altering the G protein-linked cellular signal transduction processes (33). Hypovirus-infected fungal strains (hypovirulent strains) are able to colonize wound sites and form super®cial cankers on infected chestnut trees. One may argue that hypovirulence in this system represents a compromise that is bene®cial for the survival of both the virus and fungal host
. For example, the hypoviruses CHV1, CHV2, CHV3 and CHV4, associated with hypovirulence in Chryphonectria parasitica , show phylogenetic relatedness to several species of the ssRNA genus Potyvirus (Fauquet et al ., 2005; Linder-Basso et al ., 2005), while an RNA-dependent RNA polymerase (RdRp) sequence from a Fusarium graminearum dsRNA was closely related to those of CHV1, CHV2 and CHV3, and the potyvirus Barley yellow mosaic virus
Xie et al., (2006) also pointed out that several ssRNA mycoviruses associated with debilitation/hypovirulence (including SsDVR) are phylogenetically much closer to positive strand RNA plant viruses than to the typically avirulent dsRNA fungal viruses.
Howitt et al. (2006) point out that the evolutionary relationship between the fungal pathogen Botrytis and the plant genus Allium is probably a long one. Allium species are susceptible to several allexiviruses, including GVE, GVA, GVX and ShVX, and B. cinerea may have coincidentally taken up plant viruses during the infection process. In particular, BVX shows 73% amino acid identity to the RdRp of Garlic virus A , which is much higher than that reported between most other mycoviruses and ssRNA plant viruses. This may indicate either a recent recombination event between the two viruses or a relatively recent divergence from a common ancestor
The negative effects of mycoviruses are reduced growth rate, abnormal pigmentation, lack of sporulation and the most important effect is hypovirulence
the term cryptic is favoured, implying that symptoms can be expressed under some conditions. Although McCabe et al . (1999) comment that while it seems odd that so many mycovirus evolutionary lineages have led to the same (apparently) neutral state, virus virulence is ultimately limited by the need for the host to survive and propagate the virus, which produces selective pressure towards viruses that are symptomless or even beneficial to the Similarily, the brown discoloration of fruiting body of Flammulina velutipes caused by a mycovirus F. velutipes browning virus (FvBV);
Oyster mushroom spherical virus (OMSV) (Yu et al ., 2003) and Oyster mushroom isometric virus
Fungi which are infected with dsRNA viruses have increased ability of the survival of the fungal host plant; when they are facing the high temperature regimes. Marquezet al. (2007), reported that the thermal tolerance of fungal host plant is a three way symbiosis i.e. interaction between virus, fungus and plant. Tropical panic grass inoculated with fungus containing Curvularia thermal tolerance virus (CThTV) is survived at temperature regime of 55 0 C. When grown separately, neither the fungus nor the plant alone is able to grow at temperatures above 38°C, but symbiotically, they are able to tolerate elevated temperature regimes.
Killer strains of several yeast species secrete proteins toxic to sensitive cells of the same or closely related species. The producing cells are immune to this toxin. Most of the characterized killer toxins disturb membrane integrity [35]. These killer toxins and immunity are encoded on satellite dsRNAs in several yeasts (it can also be encoded on DNA plasmids or by nuclear genes in other species). The M1, M2 and M28 dsRNAs of Saccharomyces cerevisiae are encapsidated in virus particles, and need a helper virus (L-A virus in this species) for replication and encapsidation. DsRNAs with similar function have been found in other yeasts including Hanseniaspora, Zygosaccharomyces, Phaffia species, and also in Ustilago maydis [44]. Killer toxins may have several applications in medicine, food technology and agriculture (for details, see [35, 44]). The killer toxins of Hanseniaspora and Zygosaccharomyces species are especially promising as they have broad-spectrum antifungal activity against a number of human and plant pathogenic fungi including Serpula, Heterobasidion, Fusarium, Candida and Sporothrix species
The most sensitive race of S.cerevisiae contains the viral particles of 40 nm diameter with a single dsRNA designated as L. The Killer strains also contain a dsRNA of molecular weight of about 1.1 – 1.4 × 106 designated as M. The coat proteins of both are indistinguishable serologically or in electrophoresis.
The M dsRNA encodes the labile glycoprotein killer strain (confirmed by in vivo translation), and is believed to determine the immunity factor. The M is found only in cells containing the L dsRNA. The L is supposed to encode both RNA polymerase and the coat protein for L and M RNAs
ungal pathogens are a major source of plant disease. Although fungicides have proved immensely successful in controlling many diseases, their use is increasingly threatened by the development of fungicide‐resistant strains and public concern about unwanted environmental and human health side‐effects. Various biological approaches to plant disease management have been proposed but few are, as yet, widely successful in practice. The potential of mycoviruses as biological control agents of plant pathogenic fungi was first demonstrated for Chryphonectria parasitica (Nuss, 1992). However, even when mycoviruses clearly have the ability to reduce the virulence of fungal plant pathogens, given that hyphal interaction is the only known mechanism for transmission between fungal colonies, the vegetative incompatibility shown by many fungal species is a major barrier to their adoption as biological control agents. For example, while CHV1 cDNA was successfully used as a biological control of C. parasitica in Europe it was not as successful in North America because the fungus showed greater genetic diversity with multiple VCGs limiting the spread of the virus (Nuss, 1992). Xie et al. (2006) also concluded that it would be very difficult to control Sclerotinia sclerotiorum with SsDRV because of vegetative incompatibility, but as a restricted range of VCGs (clones) dominate in some agricultural ecosystems (Hambleton et al., 2002) it may prove possible to produce virus‐infected strains to match specifc VCGs. In the case of the closely related Botrytis cinerea, however, field strains are much less clonal (Beever and Weeds, 2004) and such matching is likely to be challenging.
During 1970s, hypovirulence in chestnut blight (Cryphonectria parasitica) revolutionized the discovery of mycoviruses in plant pathogenic fungi.
Mycoviruses can alter phenotypes of infected fungi, such as reduced growth, pigmentation and lack of sporulation. They cause change in morphology, colony of infected fungi and cause latent and persistent infections (Buck, 1986). Some mycovirus families are connected with variable phenotypic effects such as hypovirulence or killer phenomena in their host. Hypovirulence is, among other characteristics, defined as reduced pigmentation, reduced asexual sporulation, loss of fertility and reduced growth rate (Van Diepeningen et al., 2006; Polashock et al., 1997; Park et al., 2004; Deng et al., 2007; Jiang and Ghabrial, 2004). Hypovirulence associated mycoviruses have ssRNA or, mainly, dsRNA genomes. The killer phenomena are induced by proteins encoded by satellite dsRNA (Schmitt et al., 1997).
The mechanism of hypovirulence is still not clear, but various hypothesis were given by different workers, such as signal transduction pathways (Turina and Rostagno, 2007), RNA silencing of the fungus and the counter silencing mechanisms by the hypovirus (Nuss, 2011). There are various other mechanisms, which are reported such as mitochondrial mutations, nuclear mutations and plasmids have been, or may be, associated with hypovirulence
The mechanism of hypovirulence is best examined in Cryphonectria parasitica, where the hypovirus disturbes fungal development (sporulation and virulence) [45]. Virus infection reduces the levels of protein G in the cell, thus leading to enhanced cAMP accumulation [53]. At the same time, the virus also affects the secretion of proteins by using the vesicles of the secretory pathway for virus replication, resulting in decreased laccase, hydrophobin and cellulase secretion. These proteins are necessary for successful infection and invasion of chestnut trees. A possible explanation for the effect of this virus on host is silencing the homologous gene through posttranscriptional gene silencing (PTGS) [54, 55]. Gene silencing is due to sequencespecific degradation of mRNAs. Virus vectors containing inserts homologous to endogenous genes can induce PTGS. This mechanism was found to be widespread in plants and have also been observed in some fungi including Neurospora and Fusarium species [56, 57]. PTGS is thought to act as a defense mechanism against transposons and viruses
Mycovirus-induced hypovirulence (reduction in virulence of phytopathogenic fungi) is best appreciated in reflections on the devastating chestnut blight pathogen C. parasitica, which destroyed the beloved American chestnut tree at the turn of the twentieth century. The hopeful quotation from Robert Frost's “Evil Tendencies Cancel” comes to mind:
“Will the blight end the chestnut? The farmers rather guess not. It keeps smoldering at the roots And sending up new shoots Till another parasite Shall come to end the blight.”
Hypovirulence against Cryphonecteria parasitica (Chestnut blight) : Chestnut blight cankers were first reported in the United States in 1904 on American chestnut trees. In 1926 the fungus was reported throughout the native range of American chestnut. In 1913, Frank Meyer also reported the disease in China and in 1915 from Japan. After its discovery in 1904, the blight spread rapidly at about 20-50 miles per year. By 1950, the blight had devastated 9 million acres of forests by killing several billion American chestnut trees. Jene Grente reported in 1965 ‘hypovirulent’ strains of the blight fungus from Italy and use of these strains in a successful biological control of chestnut blight. After four or five years of therapy, hypovirulent strains began to spread through the chestnut orchards of France, the trees began ‘healing’ over the blight cankers with bark-callus tissue. In 1972, Grente’s hypovirulent strains were imported to USA and used as biocontrol agent.
2.The host range of individual mycoviruses would also be limited to single species, or closely related species, where host speciation has occurred following mycovirus infection
Koonin et al. (1991) discuss this possibility in relation to the sequence similarity (across five distinct domains) and presumed common ancestry of the chestnut blight hypovirulence-associated dsRNAs and plant potyviruses They suggest that the most plausible explanation is that a saprophytic or pathogenic fungus acquired an ssRNA virus from a plant followed by loss of the coat protein gene and a shift towards the dominance of the dsRNA replicative form of the virus due to different evolutionary pressures such as horizontal transmission by hyphal anastamosis. However, they also acknowledge that the opposite is possible and that ssRNA plant viruses could have been derived from a dsRNA fungal virus
In the present study, we explore the infectivity of SsHADV-1 particles toward S. sclerotiorum hyphae and the ability of SsHADV-1 to protect plants against S.sclerotioruminfectionanddamage.Herewedemonstratedthat SsHADV-1 can be transmitted extracellularly and holds the potential for use in biological control of S. sclerotiorum diseases.
Extracellular transmission of SsHADV-1 particles to S. sclerotiorum isolates belonging to different vegetative compatibility groups (VCGs).
c. The virus-infected cultures were confirmed both by total genomic DNA analysis and PCR amplification. PCR amplification was performed using specific primers, which were designed based on the CP sequence of SsHADV-1. DNA samples (Upper) and PCR products (Lower) were fractionated on 1.0% agarose gel. Lane M: λ-Hind III-digested DNA marker (Upper) and DL2000 DNA marker (Lower).
Majority of mycoviruses have segmented dsRNA in their genome and belong to family Hypoviridae, Totiviridae, Partitiviridae, Chrysoviridae and Reoviridae, that are found to infect fungi in phylum Chytridiomycota, Zygomycota, Ascomycota and Basidiomycota. Various techniques are used for detection of these mycoviruses are direct electron-microscopic (EM), immunosorbent electron microscopy (IEM or ISEM), polyacrylamide gel electrophoresis (PAGE), enzyme-linked immunosorbent assay (ELISA) and reverse transcription polymerase chain reaction assay (RT-PCR). Mycoviruses can alter the phenotypes of infecting fungi such as reduced growth, pigmentation and lack of sporulation. Mycoviruses causes economical losses to mushroom industries. Mycoviruses can be used as biological control agents, because of the hypovirulence and killer phenomenon. Further structural and functional studies may help identify
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the target proteins and those aspects of the antifungal proteins involved in specificity. In turn, this information may allow for the creation of antifungal proteins with a wider spectrum of activity and broader application in crops. Mycoviruses can be used for curing of various human diseases. Mycoviruses increase the thermal tolerance of fungal host plant. In future, we need to establish a system to explore hypovirulence-associated mycoviruses to control crop fungal diseases. Genetically modifying fungal strains must be developed to break the limitation of virus transmission that is caused by the host vegetative-incompatibility reaction, understanding the ecological properties of virus infected fungal strains and the mechanisms of virus transmission in fields, understanding the proper time for delivering mycovirusinfected strains in fields, and producing and formularizing virus-infected fungal strains or virus particles for commercial use. At present, because of the lack of appropriate disease control strategies, control of plant pathogenic fungi is a difficult task. Use of fungicides possess health hazards and the risks to the environment, this is often cost prohibitive. Mycoviruses have the potential to control fungal diseases of crops when associated with hypovirulence. Continued advances in scientific technology, research on mycoviruses and their fungal hosts will provide new insights into the largely unknown world of mycoviruses.
The study of mycoviruses has proved technically challenging because of their frequently non‐symptomatic nature and lack of infectivity. Nevertheless, it is apparent that the pace of mycovirus research is poised for significant expansion in the next few years, as workers adopt many of the elegant new tools that are becoming increasingly available from molecular studies.
As increasing numbers of mycovirus full genome sequences become available our understanding of phylogenetic relationships and ultimately mycovirus evolution will improve. In particular, new discoveries elucidating the relationships between mycoviruses and plant viruses will inform our understanding of the direction and frequency of cross‐kingdom virus movement. Additionally, full genome sequence data are becoming available for some of the target hosts, including Agaricus bisporus, Botrytis cinerea and Sclerotinia sclerotiorum, which, together with in vitro methods of transfecting fungal hosts, will expand opportunities to unravel virus–host interactions.
Perhaps the biggest opportunity for mycovirus research is to develop them further as biocontrol agents, to assist in the control of plant pathogens. Such exploitation is highly dependent on knowledge of the behaviour of both host and virus in the field. The population biology of fungi is becoming better understood and although the population studies of mycoviruses are in their infancy, they can be expected to expand rapidly with the increasing availability of virus‐specific molecular detection methods. Such developments will underpin biocontrol opportunities and provide new insights into mycovirus biology
As many mycoviruses appear to have only minimal effect on their host fungi, a complementary approach to biological control might be the use of mycoviruses as gene vectors. Using this approach the mycovirus itself does not need to have a significant deleterious effect on the host but it would require a genomic structure amenable to the incorporation of non‐viral genes. The ssRNA mycoviruses belonging to the Flexiviridae, BVX, BCVF and SsDRV, are prime candidates for this approach, as the flexivirus Potato virus X has been successfully used as a vector for the expression of genes from a range of different sources in plantsMycoviruses in particular could conceivably be exploited for biological control of their natural fungal hosts that are pathogenic for plants. In the past, such applications of mycoviruses were markedlycurtailed by technical difficulties in gaining an insight into their biology and structure, but these limitations have been decreasing with the advent of new research approaches