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APPLIED AND ENVIRONMENTAL MICROBIOLOGY, July 2005, p. 3512–3518                                                                  Vol. 71, No. 7
0099-2240/05/$08.00ϩ0 doi:10.1128/AEM.71.7.3512–3518.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.



        Role of Porins in Sensitivity of Escherichia coli to Antibacterial
               Activity of the Lactoperoxidase Enzyme System
                    Philipp De Spiegeleer, Jan Sermon, Kristof Vanoirbeek, Abram Aertsen,
                                            and Chris W. Michiels*
                          Department of Food and Microbial Technology, Laboratory of Food Microbiology,
                           Katholieke Universiteit Leuven, Kasteelpark Arenberg 22, 3001 Leuven, Belgium
                                            Received 4 October 2004/Accepted 24 January 2005

             Lactoperoxidase is an enzyme that contributes to the antimicrobial defense in secretory fluids and that has
          attracted interest as a potential biopreservative for foods and other perishable products. Its antimicrobial
          activity is based on the formation of hypothiocyanate (OSCN؊) from thiocyanate (SCN؊), using H2O2 as an
          oxidant. To gain insight into the antibacterial mode of action of the lactoperoxidase enzyme system, we
          generated random transposon insertion mutations in Escherichia coli MG1655 and screened the resultant
          mutants for an altered tolerance of bacteriostatic concentrations of this enzyme system. Out of the ca. 5,000
          mutants screened, 4 showed significantly increased tolerance, and 2 of these had an insertion, one in the waaQ
          gene and one in the waaO gene, whose products are involved in the synthesis of the core oligosaccharide moiety
          of lipopolysaccharides. Besides producing truncated lipopolysaccharides and displaying hypersensitivity to




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          novobiocin and sodium dodecyl sulfate (SDS), these mutants were also shown by urea-SDS-polyacrylamide gel
          electrophoresis analysis to have reduced amounts of porins in their outer membranes. Moreover, they showed
          a reduced degradation of p-nitrophenyl phosphate and an increased resistance to ampicillin, two indications
          of a decrease in outer membrane permeability for small hydrophilic solutes. Additionally, ompC and ompF
          knockout mutants displayed levels of tolerance to the lactoperoxidase system similar to those displayed by the
          waa mutants. These results suggest that mutations which reduce the porin-mediated outer membrane perme-
          ability for small hydrophilic molecules lead to increased tolerance to the lactoperoxidase enzyme system
          because of a reduced uptake of OSCN؊.


   Lactoperoxidase (LP) is a heme peroxidase that catalyzes                  whether LP activity destabilizes the cellular redox homeostasis
the oxidation by hydrogen peroxide of a wide range of sub-                   in this way. When LP is applied at physiological concentra-
strates. It is found in secretions such as milk, tears, saliva, and          tions, the effect of the LP system is mainly bacteriostatic, which
airway mucus from humans and other mammals and, together                     may be related to the fact that thiol-disulfide conversions are
with several other related heme peroxidases, has an important                reversible. At higher concentrations or when cells are appro-
function in the host defense against microbial invaders (8, 17,              priately sensitized, for example, by heat (48) or hydrostatic
46). The major physiological substrate for LP is thiocyanate                 pressure treatment (10), the LP system can have a bactericidal
(SCNϪ), which is present in milk, for example, at concentra-                 effect. This bactericidal effect may be related to the production
tions ranging from 1 to 15 ppm and which is oxidized to                      of small amounts of oxygen radicals by the LP system (4),
hypothiocyanate (OSCNϪ), a reactive oxidant, and to some                     which cause irreversible protein oxidation by the formation of
other minor reaction products. Bromide and iodide anions may                 carbonyl groups.
also be oxidized by LP, but unlike, for instance, chloroperoxi-                 Natural antimicrobial systems such as the lactoperoxidase
dase and myeloperoxidase, LP is unable to oxidize the chloride               system have gained considerable interest as “natural” preser-
ion (7). The antimicrobial activity of peroxidase enzyme sys-                vatives of foods and industrial, cosmetic, and health care prod-
tems is based on the oxidative power of their reaction products,             ucts, and the potential of the LP/H2O2/SCNϪ system to extend
and enzymes and other proteins in the bacterial cell membrane                the shelf life of various foods has been amply demonstrated
that have exposed thiol groups (-SH) are believed to be the                  (17, 39, 43). It is assumed that the use of the LP system in foods
major targets of the LP/SCNϪ system, as they are converted to                presents little or no toxicological concern provided that the
disulfides. As a result, exposed cells would accumulate mem-                  physiological exposure is not exceeded, since LP is an endog-
brane damage, resulting in a loss of the pH gradient, Kϩ                     enous enzyme in humans that, in addition, is also naturally
leakage, and an inhibition of respiration or the transport of                present in many foods, such as milk (7). Furthermore, several
solutes such as amino acids and glucose (8, 35, 41). However,                studies reporting a protective effect of LP in the diet against
other cellular thiol compounds, such as glutathione (20), can                enteropathogens have stimulated the development of LP-con-
also be oxidized, at least in vitro, but it remains to be demon-             taining nutraceuticals which claim health-promoting effects
strated whether these oxidations take place in vivo and                      (13).
                                                                                The cellular defense mechanisms and stress response of mi-
                                                                             croorganisms against the LP system are poorly known, as op-
  * Corresponding author. Mailing address: K.U. Leuven, Laboratory
of Food Microbiology, Kasteelpark Arenberg 22, B-3001 Leuven, Bel-
                                                                             posed to the defense mechanisms against H2O2 and superoxide
gium. Phone: 32-16-32 15 78. Fax: 32-16-32 19 60. E-mail: chris              (O2°Ϫ), two other forms of oxidative stress, which have been
.michiels@agr.kuleuven.ac.be.                                                described in detail for Escherichia coli. We recently demon-

                                                                      3512
VOL. 71, 2005                                                              MUTANTS RESISTANT TO THE LACTOPEROXIDASE SYSTEM                                           3513


                  TABLE 1. Primers used for this study                                 the presence of (i) lactoperoxidase (5 ␮g/ml), (ii) KSCN (0.25 mM), (iii) glucose
                                                                                       (0.4%), and (iv) glucose oxidase (0.1 units/ml). The function of the glucose
   Primer                                                  5Ј–3Јa
                                                                                       oxidase enzyme and of glucose was to generate H2O2 in situ, which subsequently
Pcat1.................................................AAGCACCGCCGGACATC                served as a substrate for the lactoperoxidase enzyme. Cells were inoculated at an
Pcat2.................................................CTCCCAGAGCCTGATAA                initial density of approximately 104 CFU/ml by diluting cultures grown at 37°C in
PompmutC1 .....................................AAGGCATATAACAGAGGGTT                    LB medium in microplates for 21 h. Incubation was done at 25°C for 44 to 64 h,
                                                       AATAACATGAAAGTTAAAG             and the optical density was measured every 15 min by use of a wide-band filter
                                                       TACTGTgtgtaggctggagctgcttc      (405 to 600 nm). Under these conditions, the LP system caused complete growth
PompmutC2 .....................................CCAGACCCAGAGCTACGATG                    inhibition of E. coli MG1655 for at least 40 h, while at 37°C, growth inhibition
                                                       TTATCAGTGTTGATGCCAG             was achieved for no longer than 2 h. Mutants showing growth within Ͻ40 h were
                                                       CGTCACcatatgaatatcctcctta       retested in five replicates with the same test, and when their phenotype was
PompC1 ...........................................TGATCGCAACCAACAAAGAA                 confirmed, their mini-Tn10-induced mutation was transduced via P1 into
PompC2 ...........................................GAATGGACTTGCCGACTGAT                 MG1655 and the LP tolerance of the transductants was examined once more.
PompF1............................................TCAAACATGACGAGGTTCCA                    Cloning and identification of gene knockouts. Mini-Tn10-containing genomic
PompF2............................................GCAGTGGCAGGTGTCATAAA                 DNA fragments were isolated by random cloning of ca. 40-kb large genomic
Pkan .................................................CAGTCATAGCCGAATAGCCT             DNA fragments from LP-tolerant mutants into the pWEB cosmid cloning vector
                                                                                       (Biozym, Landgraaf, The Netherlands) and the selection of chloramphenicol-
  a
    Sequences in lowercase were needed to amplify the kan gene from the pKD4           resistant transformants of E. coli EPI305 (Biozym). The genomic DNA flanking
plasmid. Sequences in uppercase are homologous to the ompC gene.                       the transposon was then sequenced from the cosmid template by the use of
                                                                                       primers complementary to the respective ends of the cat gene (32) (Pcat1 and
                                                                                       Pcat2; Table 1). Sequence analysis was performed by MWG-Biotech (Ebersberg,
                                                                                       Germany).
strated that the LP system induces a specific and unique stress
                                                                                          Isolation and electrophoretic separation of LPS. For the isolation of lipopoly-
response in E. coli (40). Here we report the isolation and                             saccharide (LPS), a protocol described by Moller et al. (28) was used. LPS was
characterization of random transposon insertion mutants of E.                          separated by 18% Tricine–sodium dodecyl sulfate–polyacrylamide gel electro-
coli MG1655 with increased tolerance to the LP system.                                 phoresis (SDS-PAGE) (33) and visualized by silver staining (12).




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                                                                                          Isolation and electrophoretic separation of outer membrane proteins. Outer
                                                                                       membrane proteins were isolated by freeze-thawing of cell suspensions in the
                         MATERIALS AND METHODS                                         presence of lysozyme and subsequent washing with 0.5% sarcosyl as described by
   Growth media and chemicals. The standard growth medium was Luria-Bertani            Mecsas et al. (25). Air-dried (3 h at 37°C) pellets were weighed, dissolved in urea
(LB) medium (10 g/l tryptone, 5 g/l yeast extract, 5 g/l NaCl, 10 g/l agar for solid   sample buffer, and loaded in a urea-SDS-PAGE gel, ensuring that equivalent
medium). Antibiotics (Sigma-Aldrich, Bornem, Belgium) were added as appro-             amounts of outer membrane material (on a weight basis) were loaded in each
priate at the following concentrations: ampicillin, 100 ␮g/ml; kanamycin, 50           lane. Urea was present in the sample buffer and the SDS-PAGE gel at a con-
␮g/ml; and chloramphenicol, 30 ␮g/ml. Tryptone soy broth (TSB) (Oxoid, Bas-            centration of 8% because this improves the separation of OmpC and OmpF (45).
ingstoke, England) was used as the growth medium for evaluations of the bac-           Gels were stained with Coomassie blue.
teriostatic activity of the lactoperoxidase system. Stock solutions of lactoperox-        SDS, novobiocin, and ampicillin sensitivity tests. SDS and novobiocin sensi-
idase (10 mg/ml) and of glucose oxidase (100 units/ml) (Sigma-Aldrich) were            tivities were tested as described by Moller et al. (28). Twofold serial dilutions of
stored at Ϫ18°C in a 50% glycerol solution in phosphate-buffered saline (2.87          SDS (200 to 0.1 mg/ml) and novobiocin (200 to 1.6 ␮g/ml) in LB broth were
mM KH2PO4, 7.12 mM K2HPO4, 0.151 M NaCl, pH 6.0). Potassium thiocyanate                made in microplates, inoculated in a final volume of 200 ␮l with approximately
(KSCN) (Acros Organics, Geel, Belgium) was stored at 4°C as a 25 mM stock              105 CFU/ml from an overnight culture, and incubated on a rotary shaker (200
solution. Filter-sterilized glucose was stored at room temperature as a 20% stock      rpm) at 37°C, and after 15 h of growth, their optical densities (at 600 nm) were
solution.                                                                              measured with a microplate reader (Multiskan RC; Thermo Electron Corpora-
   Construction of MG1655 ompC and MG1655 ompF. The one-step inactivation              tion). Growth was scored as positive for optical densities of Ն0.1.
method of Datsenko and Wanner (5) was used to make a mutant with an                       For tests of ampicillin sensitivity, overnight cultures were resuspended to
insertional mutation in ompC. First, the kanamycin resistance gene (kan) from          approximately 107 CFU/ml in honeycomb microplates containing LB broth with
plasmid pKD4 was amplified with the primers PompmutC1 and PompmutC2                     various concentrations of ampicillin, and growth at 37°C was monitored with a
(Table 1). In addition to a priming sequence of 19 or 20 nucleotides at their 3Ј       Bioscreen C automatic growth analyzer using a wide-band filter.
ends, these primers have an ϳ50-nucleotide extension homologous to ompC that              Evaluation of outer membrane permeability for small hydrophilic solutes.
will allow an exchange of the PCR product with the genomic ompC gene. The              Measurements of outer membrane permeability were based on the membrane
PCR product was then electroporated into MG1655 carrying the pKD46 plas-               diffusion barrier model described by Martinez et al. (22). The whole-cell alkaline
mid, which expresses the arabinose-inducible ␭ Red recombinase (29), to pro-           phosphatase assay of Wang et al. (47) was applied to assess the outer membrane
mote recombination. Kanamycin-resistant transformants were selected and                permeability. In this assay, the hydrolysis of p-nitrophenyl phosphate (pNPP) by
cured of pKD46 by growth at 37°C, which is a nonpermissive temperature for             an E. coli cell suspension under controlled incubation conditions is measured by
replication of this plasmid. The ompC insertional mutant was verified by PCR            the increase in absorption at 420 nm and then corrected for cell density (A420/
with the primers PompC1 and PompC2 (Table 1) and was designated LMM-                   A600). Since the test is conducted at a low substrate concentration and with cells
PDS1.                                                                                  transformed with the plasmid pIV26 (21) to overexpress PhoA in the periplasm,
   The ompF::Tn5 allele from E. coli BE strain BZB1107 (2) was transduced with         product formation will be controlled by the diffusion of pNPP through the outer
phage P1 into MG1655 (26). Direct transduction between these two strains did           membrane, and thus A420/A600 is a valid measure of outer membrane perme-
not succeed, probably because the E. coli BE DNA was degraded by the K12               ability.
restriction-modification system. Therefore, we first transduced the ompF::Tn5
allele into the restriction-negative E. coli K12 strain MT102, and from there to
MG1655, to yield strain LMM-PDS2. Since the location and orientation of the
transposon in ompF are unknown, the correct replacement of ompF by
                                                                                                                         RESULTS
ompF::Tn5, which contained the kan gene, was verified by PCR with the primer
                                                                                         Screening for mutants with increased tolerance to the LP
couples PompF1-PompF2, Pkan-PompF1, and Pkan-PompF2 in separate reac-
tions (Table 1).                                                                       antimicrobial system. In several preparatory experiments, we
   Screening for transposon insertion mutants with increased tolerance to the          determined suitable screening conditions for the detection of
LP system. Transposon knockout mutants of E. coli MG1655 were constructed              mutants with an increased tolerance to the LP system. The
by using ␭NK1324, which carries a mini-Tn10 transposon with a chloramphenicol          parameters that were varied include the growth medium,
resistance gene, according to the protocol described by Kleckner et al. (15).
Approximately 5,000 mutants were then screened for tolerance to the LP system
                                                                                       growth temperature, initial cell number, and component con-
by recording their growth curves in a Bioscreen C automatic growth analyzer            centrations of the LP system. The conditions that were finally
(Thermo Electron Corporation, Vantaa, Finland) in 300 ␮l of TSB medium in              chosen (see Materials and Methods) ensured the complete
3514          DE SPIEGELEER ET AL.                                                                                APPL. ENVIRON. MICROBIOL.


                                                                             duction. The resulting strains were designated LMM-PDS3,
                                                                             LMM-PDS4, LMM-PDS5, and LMM-PDS6. Growth curves
                                                                             for E. coli MG1655 and the four selected mutants in the ab-
                                                                             sence of additives, in the presence of the H2O2-generating
                                                                             glucose oxidase/glucose enzyme system and KSCN, and in the
                                                                             presence of the entire LP system (glucose oxidase, glucose,
                                                                             KSCN, and lactoperoxidase) are shown, respectively, in Fig.
                                                                             1A, B, and C. The LP system completely inhibited the growth
                                                                             of E. coli MG1655 for at least 40 h. The mutants all grew in the
                                                                             presence of the LP system within Ͻ40 h, but compared to the
                                                                             growth of the wild-type strain in TSB without additives, they
                                                                             exhibited an extended lag phase, a lower exponential growth
                                                                             rate, and a lower stationary-phase cell density. Exposure to
                                                                             H2O2 stress from the glucose oxidase/glucose enzyme system in
                                                                             the absence of the LP enzyme (Fig. 1B) also resulted in partial
                                                                             growth inhibition, but interestingly, this inhibition was the
                                                                             same for the wild-type strain and the mutants, indicating that
                                                                             the mutants had acquired tolerance specifically to the LP sys-
                                                                             tem.
                                                                                Identification of mini-Tn10 insertion sites and initial char-
                                                                             acterization of mutants LMM-PDS3 and LMM-PDS4. Mini-




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                                                                             Tn10-containing fragments from the four mutants were cloned,
                                                                             and a short sequence of genomic DNA flanking the trans-
                                                                             posons was determined. The insertions were located in waaO,
                                                                             waaQ, ulaA, and lrp for mutants LMM-PDS3, LMM-PDS4,
                                                                             LMM-PDS5, and LMM-PDS6, respectively, and their exact
                                                                             locations are presented in Table 2. The finding that two inser-
                                                                             tions were in the waa (formerly rfa) operon, which is involved
                                                                             in core oligosaccharide synthesis of lipopolysaccharide (LPS)
                                                                             molecules, suggested a role for the LPS layer in the tolerance
                                                                             to the LP system and prompted us to investigate these two
                                                                             mutants in more detail. Since mutations in the waa operon
                                                                             result in truncated LPS molecules and, as a result, can cause
                                                                             hypersensitivity to SDS and hydrophobic antibiotics such as
                                                                             novobiocin (49), we isolated LPS, subjected it to SDS-PAGE
                                                                             analysis, and tested the SDS and novobiocin sensitivities of the
  FIG. 1. Growth curves for E. coli strains MG1655 (■), LMM-PDS3
(waaO) (F), LMM-PDS4 (waaQ) (Œ), LMM-PDS5 (ulaA) (E), and                    mutants. Both waa knockout mutants (LMM-PDS3 and LMM-
LMM-PDS6 (lrp) (ᮀ) incubated at 25°C. (A) Growth in TSB.                     PDS4) did indeed have LPS molecules that were reduced in
(B) Growth in TSB with the addition of KSCN, glucose, and glucose            size (Fig. 2, lanes 2 and 3), while the LPS molecules of both
oxidase. (C) Growth in TSB with the addition of KSCN, glucose,               other mutants were indistinguishable from wild-type LPS. Fur-
glucose oxidase, and lactoperoxidase. Only a few measurement points
are labeled with symbols.                                                    thermore, both waa mutants also showed increased sensitivi-
                                                                             ties to SDS and novobiocin. The MICs of SDS and novobiocin,
                                                                             determined by a 15-h growth test described in Materials and
growth inhibition of E. coli MG1655 for at least 40 h. Out of ca.            Methods, were reduced 2-fold for the waaO mutant and 500-
5,000 random mini-Tn10 mutants, 12 showed an increased                       fold and 12-fold, respectively, for the waaQ mutant compared
tolerance to the LP system after a first screen, and for 4 of                 to the wild-type strain MG1655 (Table 3). The LMM-PDS5
these, the phenotype could be confirmed with a second test.                   and LMM-PDS6 mutants had no altered sensitivity to SDS or
These mutants were cotransduced with mini-Tn10 by P1 trans-                  novobiocin (data not shown).


                              TABLE 2. Locations of transposon insertions in four lactoperoxidase-tolerant mutants
                                                                                                                Orientation of transposon-encoded
                          Knocked-out            Coordinates of gene open           Position of transposon
     Strain                                                                                                     resistance marker relative to gene
                             gene                    reading framea                   on coding strand
                                                                                                                           coding strand

LMM-PDS3                    waaO                    3801081–3800062                         3801072                        Same
LMM-PDS4                    waaQ                    3806121–3805087                         3805205                        Same
LMM-PDS5                    ulaA                    4417946–4419400                         4418348                        Opposite
LMM-PDS6                    lrp                     0931818–0932312                         0932016                        Same
 a
     From Escherichia coli K-12 MG1655 complete genome (GenBank accession number U00096).
VOL. 71, 2005                                             MUTANTS RESISTANT TO THE LACTOPEROXIDASE SYSTEM                            3515




                                                                        FIG. 3. SDS-PAGE gel of Coomassie blue-stained outer mem-
                                                                     brane proteins. Lanes: 1, MG1655; 2, LMM-PDS3 (waaO); 3, LMM-
                                                                     PDS4 (waaQ); 4, LMM-PDS1 (ompC); and 5, LMM-PDS2 (ompF).
   FIG. 2. LPS profiles of wild-type MG1655 (lane 1), LMM-PDS3
                                                                     OmpC and OmpF bands were identified by comparisons to the corre-
(waaO) (lane 2), LMM-PDS4 (waaQ) (lane 3), LMM-PDS5 (ulaA)
                                                                     sponding knockout reference strains. The OmpA band was presump-
(lane 4), LMM-PDS6 (lrp) (lane 5), LMM-PDS1 (ompC) (lane 6), and
                                                                     tively identified based on its position relative to OmpC and OmpF and
LMM-PDS2 (ompF) (lane 7).
                                                                     by comparison with the results of Brissette et al. (3) and Liu and
                                                                     Ferenci (19).


   Outer membrane protein content and permeability to hy-
drophilic molecules. Since truncated LPS molecules can result           Tolerance of ompC and ompF knockout mutants to the LP
in reduced amounts of proteins, particularly porins, being in-       system. The tolerance of the ompC and ompF mutants to the
corporated into the outer membrane (1, 16), we conducted an          LP system was analyzed and compared to that of the wild-type
electrophoretic analysis of the outer membrane proteins of the       strain MG1655 and one of the isolated LP-tolerant waa mu-
waa mutants and of ompC and ompF knockout mutants for                tants, using the same approach as that for the initial screening
comparison. The latter allowed us to identify the OmpC and           of the mutant collection. Both porin mutants showed an in-
                                                                     creased tolerance to the LP system, to a similar extent as that




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OmpF proteins on the gel. For the same amount of outer
membrane material, both mutants showed reduced quantities            of the waaO mutant shown in Fig. 1C (data not shown).
of the OmpC and OmpF proteins compared to those in strain
MG1655 (Fig. 3, lanes 2 and 3). The amount of a third protein                                  DISCUSSION
of approximately 35 kDa that is present in outer membrane
extracts of MG1655 and that has been proposed to be OmpA                For this work, we isolated four transposon insertion mutants
in other studies (3, 19) was slightly increased in both waa          of the Escherichia coli K12 strain MG1655 that showed in-
mutants.                                                             creased tolerance to the antimicrobial effect of the lactoper-
   Since OmpC and OmpF form channels allowing the passive            oxidase system. Interestingly, this tolerance was specific to the
diffusion of small hydrophilic molecules through the outer           lactoperoxidase system since no increased resistance to H2O2
membrane, we speculated that the increased tolerance of the          was observed (Fig. 1). This suggests that hypothiocyanate, the
waa mutants to the LP system might stem from a reduced               presumed active antimicrobial component of the lactoperoxi-
uptake of OSCNϪ, the active component generated by the               dase system when thiocyanate is used as a substrate, has a
system. Therefore, we compared the outer membrane perme-             mode of action which is different from that of H2O2. This idea
abilities of the different strains by using a pNPP assay and an      is further supported by the recent finding that the lactoperox-
ampicillin sensitivity test (see Materials and Methods). Figure      idase system elicits a distinct stress response in E. coli which is
4 shows that compared to wild-type MG1655, both waa mu-              different from the responses induced by H2O2 and the super-
tants exhibited a reduced uptake of pNPP, as was the case for        oxide generator plumbagin (40).
porin knockout mutants of ompC and ompF which were in-                  Two of the four mutants had an insertion in the central waa
cluded in the experiment as controls. Resistance to the hydro-       operon, which in E. coli K12 consists of 10 genes whose prod-
philic antibiotic ampicillin was used as an alternative method       ucts are involved in the assembly and decoration of the core
to estimate the porin-dependent outer membrane permeabil-
ity. Figure 5 shows that compared to wild-type E. coli MG1655,
the waa mutants and the ompF mutant had an increased re-
sistance to 5 ␮g/ml of ampicillin. In contrast, the ompC mutant
showed a reduced resistance, probably because in this strain
OmpF is still present and other proteins, including (the puta-
tive) OmpA, are overexpressed (Fig. 3).



   TABLE 3. MICs of SDS and novobiocin for E. coli MG1655,
        LMM-PDS3 (waaO), and LMM-PDS4 (waaQ)
                                          MIC
   Strain                                                               FIG. 4. Outer membrane permeability of mutant strains relative to
                        SDS (mg/ml)             Novobiocin (␮g/ml)   that of MG1655. The height of each bar is correlated with the absorp-
MG1655                     100                        100            tion at 420 nm and thus with the degradation of p-nitrophenyl phos-
LMM-PDS3                    50                         50            phate by alkaline phosphatase. Each bar represents the average of
LMM-PDS4                     0.2                       12.5          three independent experiments, with the error bars corresponding to
                                                                     the standard deviation.
3516     DE SPIEGELEER ET AL.                                                                                 APPL. ENVIRON. MICROBIOL.


                                                                        via porins (21, 24, 53) and that is converted by the periplasmic
                                                                        alkaline phosphatase into p-nitrophenol, a yellow compound
                                                                        that can be quantified by its absorption at 420 nm. At low
                                                                        substrate concentrations and in the presence of excess alkaline
                                                                        phosphatase (by phoA overexpression from the plasmid pIV26
                                                                        [21]), the uptake of pNPP rather than the availability of alka-
                                                                        line phosphatase is the rate-limiting step (23), and the increase
                                                                        in absorption at 420 nm is a measure of the outer membrane
                                                                        permeability. Resistance to the hydrophilic antibiotic ampicil-
                                                                        lin was used as an alternative method to estimate the porin-
                                                                        dependent outer membrane permeability. The validity of this
                                                                        approach is based on the findings that ampicillin passes the
                                                                        outer membrane barrier through the porins, especially OmpF
  FIG. 5. Growth curves for E. coli strains MG1655 (■), LMM-PDS3
(waaO) (F), LMM-PDS4 (waaQ) (Œ), LMM-PDS1 (ompC) (ϩ), and               (30, 31), and that a reduction in porin content can increase the
LMM-PDS2 (ompF) (ϫ) incubated at 37°C in LB supplemented with           resistance to some antibiotics, including ampicillin (36, 37, 38).
5 ␮g/ml ampicillin. Each curve represents the averages of three inde-   These methods demonstrated that the waaO and waaQ mu-
pendent experiments.                                                    tants had a lower uptake of the hydrophilic molecules pNPP
                                                                        and ampicillin (Fig. 4 and 5). We believe that this was caused
                                                                        by the lower porin content of these strains, since a similar
oligosaccharide of LPS (34). The LMM-PDS4 mutant has an                 reduction in pNPP permeability was apparent for OmpC and
insertion in waaQ, the first gene of the operon, whose gene              OmpF knockout strains and a similar ampicillin sensitivity was




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product adds a heptose side chain to the last heptose of the            seen for an OmpF knockout strain. A knockout of OmpC did
inner core oligosaccharide. A nonpolar knockout mutation of             not affect the ampicillin sensitivity of E. coli, but this can be
this gene does not produce a particular phenotype (28, 49).             explained by the facts that ampicillin preferentially passes the
Therefore, the LPS truncation (Fig. 2) and SDS and novobio-             outer membrane via OmpF (30, 31) and that the OmpC knock-
cin sensitivity (Table 3) observed in our work suggest that the         out strain still produces the OmpF porin (Fig. 3). Finally, the
mini-Tn10 insertion in waaQ has a polar effect, knocking out            finding that both OmpF and OmpC mutants proved to be
the expression of the downstream genes in the operon and                similarly resistant as the waa mutants to the lactoperoxidase
producing a phenotype reminiscent of deep rough mutants of              system further strengthens the hypothesis that reduced outer
E. coli (28, 49). Specifically, we can anticipate that LPS in the        membrane permeability for the hydrophilic OSCNϪ ion is the
waaQ mutant will completely lack an outer core oligosaccha-             basis of the tolerance of the waa mutants to the LP system.
ride chain due to the knockout of waaG and, additionally, will             A reduced net uptake through the outer membrane is the
lack phosphoryl residues on both inner core heptoses due to             basis of several emerging resistances to antimicrobial com-
the knockout of waaP and waaY. The waaO knockout mutant,                pounds in gram-negative bacteria (31, 44, 51). Pathogenic E.
on the other hand, still has functional waaG and waaP genes,            coli O157:H7 strains, for instance, exhibit an enhanced resis-
and its LPS is thus predicted to retain an outer core oligosac-         tance to antimicrobials compared to other E. coli strains, which
charide consisting of one glucose residue and to lack only one          is believed to stem from differences in the permeative proper-
phosphoryl group on its inner core heptoses. The lack of an             ties of their porins (24). Also, exposure to ampicillin results in
extra phosphoryl residue in the waaQ LPS may explain the                the rapid emergence of E. coli mutants lacking OmpF (31).
extreme hypersensitivity of this mutant to the hydrophobic              Although this mutation provides only a low level of resistance
compounds SDS and novobiocin compared to the moderate                   to ampicillin, it may allow for the temporary survival of a
hypersensitivity of the waaO strain. The hydrophobic proper-            population that can subsequently acquire additional resistance
ties of the waaQ LPS may also explain the difficulties that we           mechanisms. Our work suggests that selection for this type of
encountered in the electrophoretic analysis of this LPS (Fig. 2).       antibiotic resistance may even occur naturally in the absence of
   Mutations leading to an altered LPS structure not only affect        any antibiotic by selection for LP resistance in saliva, milk,
the sensitivity of E. coli to hydrophobic compounds but can             tears, and airway mucus. Heme peroxidases are part of the
also compromise the proper folding and membrane integration             nonspecific host defense mechanism of plants and animals.
of outer membrane proteins such as porins and consequently              Besides lactoperoxidase, myeloperoxidase is another heme
alter the outer membrane’s permeability for hydrophilic sol-            peroxidase that plays an important role in the killing of phago-
utes (1, 6, 16, 18). The analysis shown in Fig. 3 confirmed that         cytosed bacteria (11). However, its main substrate in phago-
both waa mutants did indeed contain reduced amounts of                  cytes is ClϪ, which is oxidized to HClO (hypochlorous acid). In
OmpC and OmpF. Since we were not aware of a method to                   view of the similar chemical structures and properties of the
directly measure the uptake of hypothiocyanate ions                     OSCNϪ and ClOϪ ions, it can be expected that a reduction of
(OSCNϪ), the presumed active antimicrobial species under                porin-mediated outer membrane permeability will also provide
our experimental conditions, through the outer membrane, we             tolerance of the myeloperoxidase/ClϪ enzyme system.
adopted two widely used methods for evaluating outer mem-               Whether this will also increase the survival of porin-deficient
brane permeability that make use of other hydrophilic solutes,          mutants in phagocytes is unclear because the myeloperoxidase
assuming that these would provide a valid indication of                 system is only one of multiple bactericidal mechanisms in these
OSCNϪ permeation. The first method uses p-nitrophenyl                    cells (11).
phosphate (pNPP), a hydrophilic molecule that enters the cell              The development of a tolerance to OSCNϪ generated by the
VOL. 71, 2005                                                            MUTANTS RESISTANT TO THE LACTOPEROXIDASE SYSTEM                                           3517


LP system and/or of ClOϪ is also relevant in the context of                          12. Heukeshoven, J., and R. Dernick. 1985. Simplified method for silver staining
                                                                                         of proteins in polyacrylamide gels and the mechanism of silver staining.
food preservation and disinfection. For example, the resistance                          Electrophoresis 6:103–112.
of Salmonella to ClOϪ has been reported and several possible                         13. Horton, B. S. 1995. Commercial utilization of minor milk components in the
mechanisms have been suggested, but the role of porins was                               health and food industries. J. Dairy Sci. 78:2584–2589.
                                                                                     14. Hung, S. P., P. Baldi, and G. W. Hatfield. 2002. Global gene expression
not investigated (27). Furthermore, besides studies of the po-                           profiling in Escherichia coli K12—the effects of leucine-responsive regulatory
tential of “natural” preservative systems such as the LP system                          protein. J. Biol. Chem. 277:40309–40323.
to increase the safety and extend the shelf-life of perishable                       15. Kleckner, N., J. Bender, and S. Gottesman. 1991. Uses of transposons with
                                                                                         emphasis on Tn10. Methods Enzymol. 204:139–180.
foods and other products, studies are also needed to address                         16. Koplow, J., and H. Goldfine. 1974. Alterations in outer membrane of cell-
the potential emergence of LP tolerance. Finally, our research                           envelope of heptose-deficient mutants of Escherichia coli. J. Bacteriol. 117:
                                                                                         527–543.
group has previously reported that a sublethal treatment with                        17. Kussendrager, K. D., and A. C. M. van Hooijdonk. 2000. Lactoperoxidase:
high hydrostatic pressure strongly sensitizes bacteria to the LP                         physico-chemical properties, occurrence, mechanism of action and applica-
system, opening perspectives for the application of this com-                            tions. Br. J. Nutr. 84:S19–S25.
                                                                                     18. Laird, M. W., A. W. Kloser, and R. Misra. 1994. Assembly of LamB and
bined treatment for mild food preservation (9, 10). The impli-                           OmpF in deep rough lipopolysaccharide mutants of Escherichia coli K-12. J.
cations of the LP tolerance reported in the present work on the                          Bacteriol. 176:2259–2264.
efficiency of this combined treatment should be further inves-                        19. Liu, X., and T. Ferenci. 1998. Regulation of porin-mediated outer membrane
                                                                                         permeability by nutrient limitation in Escherichia coli. J. Bacteriol. 180:3917–
tigated.                                                                                 3922.
   In this work, we also identified two LP-resistant mutants (lrp                     20. Lovaas, E. 1992. Free-radical generation and coupled thiol oxidation by
and ulaA) that were not further investigated. Lrp is a global                            lactoperoxidase/SCNϪ/H2O2. Free Radic. Biol. Med. 13:187–195.
                                                                                     21. Martinez, M. B., F. J. Schendel, M. C. Flickinger, and G. L. Nelsestuen.
regulator that coordinates cellular metabolism with the nutri-                           1992. In vivo kinetic-studies of clustered enzymes using overexpression of
tional state of the environment and, as such, affects the expres-                        alkaline-phosphatase in Escherichia coli. FASEB J. 6:A460.
                                                                                     22. Martinez, M. B., M. C. Flickinger, and G. L. Nelsestuen. 1996. Accurate
sion of multiple genes and operons, including some stress re-                            kinetic modeling of alkaline phosphatase in the Escherichia coli periplasm:




                                                                                                                                                                            Downloaded from aem.asm.org by on May 4, 2010
sponse genes (14, 42). Furthermore, Lrp-deficient mutants                                 implications for enzyme properties and substrate diffusion. Biochemistry
were found to possess a growth advantage during stationary                               35:1179–1186.
                                                                                     23. Martinez, M. B., M. C. Flickinger, and G. L. Nelsestuen. 1999. Steady-state
phase (GASP phenotype) (54). UlaA is involved in the utili-                              enzyme kinetics in the Escherichia coli periplasm: a model of a whole cell
zation of L-ascorbic acid (50, 52), an antioxidant that can neu-                         biocatalyst. J. Biotechnol. 71:59–66.
tralize OSCNϪ generated by the LP system. However, further                           24. Martinez, M. B., M. Flickinger, L. Higgins, T. Krick, and G. L. Nelsestuen.
                                                                                         2001. Reduced outer membrane permeability of Escherichia coli O157:H7:
work will be required to elucidate the precise mechanisms by                             suggested role of modified outer membrane porins and theoretical function
which mutations in lrp and ulaA confer LP tolerance on E. coli.                          in resistance to antimicrobial agents. Biochemistry 40:11965–11974.
                                                                                     25. Mecsas, J., P. E. Rouviere, J. W. Erickson, T. J. Donohue, and C. A. Gross.
                                                                                         1993. The activity of sigma(E), an Escherichia coli heat-inducible sigma-
                          ACKNOWLEDGMENTS                                                factor, is modulated by expression of outer membrane proteins. Genes Dev.
                                                                                         7:2618–2628.
  This work was conducted in the framework of research projects
                                                                                     26. Miller, J. H. 1972. Experiments in molecular genetics. Cold Spring Harbor
financed by the K.U. Leuven Research Fund (OT/01/35) and the Fund                         Laboratory Press, Cold Spring Harbor, N.Y.
for Scientific Research Flanders (F.W.O. G.0195.02).                                  27. Mokgatla, R. M., P. A. Gouws, and V. S. Brozel. 2002. Mechanisms contrib-
                                                                                         uting to hypochlorous acid resistance of a Salmonella isolate from a poultry-
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11

  • 1. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, July 2005, p. 3512–3518 Vol. 71, No. 7 0099-2240/05/$08.00ϩ0 doi:10.1128/AEM.71.7.3512–3518.2005 Copyright © 2005, American Society for Microbiology. All Rights Reserved. Role of Porins in Sensitivity of Escherichia coli to Antibacterial Activity of the Lactoperoxidase Enzyme System Philipp De Spiegeleer, Jan Sermon, Kristof Vanoirbeek, Abram Aertsen, and Chris W. Michiels* Department of Food and Microbial Technology, Laboratory of Food Microbiology, Katholieke Universiteit Leuven, Kasteelpark Arenberg 22, 3001 Leuven, Belgium Received 4 October 2004/Accepted 24 January 2005 Lactoperoxidase is an enzyme that contributes to the antimicrobial defense in secretory fluids and that has attracted interest as a potential biopreservative for foods and other perishable products. Its antimicrobial activity is based on the formation of hypothiocyanate (OSCN؊) from thiocyanate (SCN؊), using H2O2 as an oxidant. To gain insight into the antibacterial mode of action of the lactoperoxidase enzyme system, we generated random transposon insertion mutations in Escherichia coli MG1655 and screened the resultant mutants for an altered tolerance of bacteriostatic concentrations of this enzyme system. Out of the ca. 5,000 mutants screened, 4 showed significantly increased tolerance, and 2 of these had an insertion, one in the waaQ gene and one in the waaO gene, whose products are involved in the synthesis of the core oligosaccharide moiety of lipopolysaccharides. Besides producing truncated lipopolysaccharides and displaying hypersensitivity to Downloaded from aem.asm.org by on May 4, 2010 novobiocin and sodium dodecyl sulfate (SDS), these mutants were also shown by urea-SDS-polyacrylamide gel electrophoresis analysis to have reduced amounts of porins in their outer membranes. Moreover, they showed a reduced degradation of p-nitrophenyl phosphate and an increased resistance to ampicillin, two indications of a decrease in outer membrane permeability for small hydrophilic solutes. Additionally, ompC and ompF knockout mutants displayed levels of tolerance to the lactoperoxidase system similar to those displayed by the waa mutants. These results suggest that mutations which reduce the porin-mediated outer membrane perme- ability for small hydrophilic molecules lead to increased tolerance to the lactoperoxidase enzyme system because of a reduced uptake of OSCN؊. Lactoperoxidase (LP) is a heme peroxidase that catalyzes whether LP activity destabilizes the cellular redox homeostasis the oxidation by hydrogen peroxide of a wide range of sub- in this way. When LP is applied at physiological concentra- strates. It is found in secretions such as milk, tears, saliva, and tions, the effect of the LP system is mainly bacteriostatic, which airway mucus from humans and other mammals and, together may be related to the fact that thiol-disulfide conversions are with several other related heme peroxidases, has an important reversible. At higher concentrations or when cells are appro- function in the host defense against microbial invaders (8, 17, priately sensitized, for example, by heat (48) or hydrostatic 46). The major physiological substrate for LP is thiocyanate pressure treatment (10), the LP system can have a bactericidal (SCNϪ), which is present in milk, for example, at concentra- effect. This bactericidal effect may be related to the production tions ranging from 1 to 15 ppm and which is oxidized to of small amounts of oxygen radicals by the LP system (4), hypothiocyanate (OSCNϪ), a reactive oxidant, and to some which cause irreversible protein oxidation by the formation of other minor reaction products. Bromide and iodide anions may carbonyl groups. also be oxidized by LP, but unlike, for instance, chloroperoxi- Natural antimicrobial systems such as the lactoperoxidase dase and myeloperoxidase, LP is unable to oxidize the chloride system have gained considerable interest as “natural” preser- ion (7). The antimicrobial activity of peroxidase enzyme sys- vatives of foods and industrial, cosmetic, and health care prod- tems is based on the oxidative power of their reaction products, ucts, and the potential of the LP/H2O2/SCNϪ system to extend and enzymes and other proteins in the bacterial cell membrane the shelf life of various foods has been amply demonstrated that have exposed thiol groups (-SH) are believed to be the (17, 39, 43). It is assumed that the use of the LP system in foods major targets of the LP/SCNϪ system, as they are converted to presents little or no toxicological concern provided that the disulfides. As a result, exposed cells would accumulate mem- physiological exposure is not exceeded, since LP is an endog- brane damage, resulting in a loss of the pH gradient, Kϩ enous enzyme in humans that, in addition, is also naturally leakage, and an inhibition of respiration or the transport of present in many foods, such as milk (7). Furthermore, several solutes such as amino acids and glucose (8, 35, 41). However, studies reporting a protective effect of LP in the diet against other cellular thiol compounds, such as glutathione (20), can enteropathogens have stimulated the development of LP-con- also be oxidized, at least in vitro, but it remains to be demon- taining nutraceuticals which claim health-promoting effects strated whether these oxidations take place in vivo and (13). The cellular defense mechanisms and stress response of mi- croorganisms against the LP system are poorly known, as op- * Corresponding author. Mailing address: K.U. Leuven, Laboratory of Food Microbiology, Kasteelpark Arenberg 22, B-3001 Leuven, Bel- posed to the defense mechanisms against H2O2 and superoxide gium. Phone: 32-16-32 15 78. Fax: 32-16-32 19 60. E-mail: chris (O2°Ϫ), two other forms of oxidative stress, which have been .michiels@agr.kuleuven.ac.be. described in detail for Escherichia coli. We recently demon- 3512
  • 2. VOL. 71, 2005 MUTANTS RESISTANT TO THE LACTOPEROXIDASE SYSTEM 3513 TABLE 1. Primers used for this study the presence of (i) lactoperoxidase (5 ␮g/ml), (ii) KSCN (0.25 mM), (iii) glucose (0.4%), and (iv) glucose oxidase (0.1 units/ml). The function of the glucose Primer 5Ј–3Јa oxidase enzyme and of glucose was to generate H2O2 in situ, which subsequently Pcat1.................................................AAGCACCGCCGGACATC served as a substrate for the lactoperoxidase enzyme. Cells were inoculated at an Pcat2.................................................CTCCCAGAGCCTGATAA initial density of approximately 104 CFU/ml by diluting cultures grown at 37°C in PompmutC1 .....................................AAGGCATATAACAGAGGGTT LB medium in microplates for 21 h. Incubation was done at 25°C for 44 to 64 h, AATAACATGAAAGTTAAAG and the optical density was measured every 15 min by use of a wide-band filter TACTGTgtgtaggctggagctgcttc (405 to 600 nm). Under these conditions, the LP system caused complete growth PompmutC2 .....................................CCAGACCCAGAGCTACGATG inhibition of E. coli MG1655 for at least 40 h, while at 37°C, growth inhibition TTATCAGTGTTGATGCCAG was achieved for no longer than 2 h. Mutants showing growth within Ͻ40 h were CGTCACcatatgaatatcctcctta retested in five replicates with the same test, and when their phenotype was PompC1 ...........................................TGATCGCAACCAACAAAGAA confirmed, their mini-Tn10-induced mutation was transduced via P1 into PompC2 ...........................................GAATGGACTTGCCGACTGAT MG1655 and the LP tolerance of the transductants was examined once more. PompF1............................................TCAAACATGACGAGGTTCCA Cloning and identification of gene knockouts. Mini-Tn10-containing genomic PompF2............................................GCAGTGGCAGGTGTCATAAA DNA fragments were isolated by random cloning of ca. 40-kb large genomic Pkan .................................................CAGTCATAGCCGAATAGCCT DNA fragments from LP-tolerant mutants into the pWEB cosmid cloning vector (Biozym, Landgraaf, The Netherlands) and the selection of chloramphenicol- a Sequences in lowercase were needed to amplify the kan gene from the pKD4 resistant transformants of E. coli EPI305 (Biozym). The genomic DNA flanking plasmid. Sequences in uppercase are homologous to the ompC gene. the transposon was then sequenced from the cosmid template by the use of primers complementary to the respective ends of the cat gene (32) (Pcat1 and Pcat2; Table 1). Sequence analysis was performed by MWG-Biotech (Ebersberg, Germany). strated that the LP system induces a specific and unique stress Isolation and electrophoretic separation of LPS. For the isolation of lipopoly- response in E. coli (40). Here we report the isolation and saccharide (LPS), a protocol described by Moller et al. (28) was used. LPS was characterization of random transposon insertion mutants of E. separated by 18% Tricine–sodium dodecyl sulfate–polyacrylamide gel electro- coli MG1655 with increased tolerance to the LP system. phoresis (SDS-PAGE) (33) and visualized by silver staining (12). Downloaded from aem.asm.org by on May 4, 2010 Isolation and electrophoretic separation of outer membrane proteins. Outer membrane proteins were isolated by freeze-thawing of cell suspensions in the MATERIALS AND METHODS presence of lysozyme and subsequent washing with 0.5% sarcosyl as described by Growth media and chemicals. The standard growth medium was Luria-Bertani Mecsas et al. (25). Air-dried (3 h at 37°C) pellets were weighed, dissolved in urea (LB) medium (10 g/l tryptone, 5 g/l yeast extract, 5 g/l NaCl, 10 g/l agar for solid sample buffer, and loaded in a urea-SDS-PAGE gel, ensuring that equivalent medium). Antibiotics (Sigma-Aldrich, Bornem, Belgium) were added as appro- amounts of outer membrane material (on a weight basis) were loaded in each priate at the following concentrations: ampicillin, 100 ␮g/ml; kanamycin, 50 lane. Urea was present in the sample buffer and the SDS-PAGE gel at a con- ␮g/ml; and chloramphenicol, 30 ␮g/ml. Tryptone soy broth (TSB) (Oxoid, Bas- centration of 8% because this improves the separation of OmpC and OmpF (45). ingstoke, England) was used as the growth medium for evaluations of the bac- Gels were stained with Coomassie blue. teriostatic activity of the lactoperoxidase system. Stock solutions of lactoperox- SDS, novobiocin, and ampicillin sensitivity tests. SDS and novobiocin sensi- idase (10 mg/ml) and of glucose oxidase (100 units/ml) (Sigma-Aldrich) were tivities were tested as described by Moller et al. (28). Twofold serial dilutions of stored at Ϫ18°C in a 50% glycerol solution in phosphate-buffered saline (2.87 SDS (200 to 0.1 mg/ml) and novobiocin (200 to 1.6 ␮g/ml) in LB broth were mM KH2PO4, 7.12 mM K2HPO4, 0.151 M NaCl, pH 6.0). Potassium thiocyanate made in microplates, inoculated in a final volume of 200 ␮l with approximately (KSCN) (Acros Organics, Geel, Belgium) was stored at 4°C as a 25 mM stock 105 CFU/ml from an overnight culture, and incubated on a rotary shaker (200 solution. Filter-sterilized glucose was stored at room temperature as a 20% stock rpm) at 37°C, and after 15 h of growth, their optical densities (at 600 nm) were solution. measured with a microplate reader (Multiskan RC; Thermo Electron Corpora- Construction of MG1655 ompC and MG1655 ompF. The one-step inactivation tion). Growth was scored as positive for optical densities of Ն0.1. method of Datsenko and Wanner (5) was used to make a mutant with an For tests of ampicillin sensitivity, overnight cultures were resuspended to insertional mutation in ompC. First, the kanamycin resistance gene (kan) from approximately 107 CFU/ml in honeycomb microplates containing LB broth with plasmid pKD4 was amplified with the primers PompmutC1 and PompmutC2 various concentrations of ampicillin, and growth at 37°C was monitored with a (Table 1). In addition to a priming sequence of 19 or 20 nucleotides at their 3Ј Bioscreen C automatic growth analyzer using a wide-band filter. ends, these primers have an ϳ50-nucleotide extension homologous to ompC that Evaluation of outer membrane permeability for small hydrophilic solutes. will allow an exchange of the PCR product with the genomic ompC gene. The Measurements of outer membrane permeability were based on the membrane PCR product was then electroporated into MG1655 carrying the pKD46 plas- diffusion barrier model described by Martinez et al. (22). The whole-cell alkaline mid, which expresses the arabinose-inducible ␭ Red recombinase (29), to pro- phosphatase assay of Wang et al. (47) was applied to assess the outer membrane mote recombination. Kanamycin-resistant transformants were selected and permeability. In this assay, the hydrolysis of p-nitrophenyl phosphate (pNPP) by cured of pKD46 by growth at 37°C, which is a nonpermissive temperature for an E. coli cell suspension under controlled incubation conditions is measured by replication of this plasmid. The ompC insertional mutant was verified by PCR the increase in absorption at 420 nm and then corrected for cell density (A420/ with the primers PompC1 and PompC2 (Table 1) and was designated LMM- A600). Since the test is conducted at a low substrate concentration and with cells PDS1. transformed with the plasmid pIV26 (21) to overexpress PhoA in the periplasm, The ompF::Tn5 allele from E. coli BE strain BZB1107 (2) was transduced with product formation will be controlled by the diffusion of pNPP through the outer phage P1 into MG1655 (26). Direct transduction between these two strains did membrane, and thus A420/A600 is a valid measure of outer membrane perme- not succeed, probably because the E. coli BE DNA was degraded by the K12 ability. restriction-modification system. Therefore, we first transduced the ompF::Tn5 allele into the restriction-negative E. coli K12 strain MT102, and from there to MG1655, to yield strain LMM-PDS2. Since the location and orientation of the transposon in ompF are unknown, the correct replacement of ompF by RESULTS ompF::Tn5, which contained the kan gene, was verified by PCR with the primer Screening for mutants with increased tolerance to the LP couples PompF1-PompF2, Pkan-PompF1, and Pkan-PompF2 in separate reac- tions (Table 1). antimicrobial system. In several preparatory experiments, we Screening for transposon insertion mutants with increased tolerance to the determined suitable screening conditions for the detection of LP system. Transposon knockout mutants of E. coli MG1655 were constructed mutants with an increased tolerance to the LP system. The by using ␭NK1324, which carries a mini-Tn10 transposon with a chloramphenicol parameters that were varied include the growth medium, resistance gene, according to the protocol described by Kleckner et al. (15). Approximately 5,000 mutants were then screened for tolerance to the LP system growth temperature, initial cell number, and component con- by recording their growth curves in a Bioscreen C automatic growth analyzer centrations of the LP system. The conditions that were finally (Thermo Electron Corporation, Vantaa, Finland) in 300 ␮l of TSB medium in chosen (see Materials and Methods) ensured the complete
  • 3. 3514 DE SPIEGELEER ET AL. APPL. ENVIRON. MICROBIOL. duction. The resulting strains were designated LMM-PDS3, LMM-PDS4, LMM-PDS5, and LMM-PDS6. Growth curves for E. coli MG1655 and the four selected mutants in the ab- sence of additives, in the presence of the H2O2-generating glucose oxidase/glucose enzyme system and KSCN, and in the presence of the entire LP system (glucose oxidase, glucose, KSCN, and lactoperoxidase) are shown, respectively, in Fig. 1A, B, and C. The LP system completely inhibited the growth of E. coli MG1655 for at least 40 h. The mutants all grew in the presence of the LP system within Ͻ40 h, but compared to the growth of the wild-type strain in TSB without additives, they exhibited an extended lag phase, a lower exponential growth rate, and a lower stationary-phase cell density. Exposure to H2O2 stress from the glucose oxidase/glucose enzyme system in the absence of the LP enzyme (Fig. 1B) also resulted in partial growth inhibition, but interestingly, this inhibition was the same for the wild-type strain and the mutants, indicating that the mutants had acquired tolerance specifically to the LP sys- tem. Identification of mini-Tn10 insertion sites and initial char- acterization of mutants LMM-PDS3 and LMM-PDS4. Mini- Downloaded from aem.asm.org by on May 4, 2010 Tn10-containing fragments from the four mutants were cloned, and a short sequence of genomic DNA flanking the trans- posons was determined. The insertions were located in waaO, waaQ, ulaA, and lrp for mutants LMM-PDS3, LMM-PDS4, LMM-PDS5, and LMM-PDS6, respectively, and their exact locations are presented in Table 2. The finding that two inser- tions were in the waa (formerly rfa) operon, which is involved in core oligosaccharide synthesis of lipopolysaccharide (LPS) molecules, suggested a role for the LPS layer in the tolerance to the LP system and prompted us to investigate these two mutants in more detail. Since mutations in the waa operon result in truncated LPS molecules and, as a result, can cause hypersensitivity to SDS and hydrophobic antibiotics such as novobiocin (49), we isolated LPS, subjected it to SDS-PAGE analysis, and tested the SDS and novobiocin sensitivities of the FIG. 1. Growth curves for E. coli strains MG1655 (■), LMM-PDS3 (waaO) (F), LMM-PDS4 (waaQ) (Œ), LMM-PDS5 (ulaA) (E), and mutants. Both waa knockout mutants (LMM-PDS3 and LMM- LMM-PDS6 (lrp) (ᮀ) incubated at 25°C. (A) Growth in TSB. PDS4) did indeed have LPS molecules that were reduced in (B) Growth in TSB with the addition of KSCN, glucose, and glucose size (Fig. 2, lanes 2 and 3), while the LPS molecules of both oxidase. (C) Growth in TSB with the addition of KSCN, glucose, other mutants were indistinguishable from wild-type LPS. Fur- glucose oxidase, and lactoperoxidase. Only a few measurement points are labeled with symbols. thermore, both waa mutants also showed increased sensitivi- ties to SDS and novobiocin. The MICs of SDS and novobiocin, determined by a 15-h growth test described in Materials and growth inhibition of E. coli MG1655 for at least 40 h. Out of ca. Methods, were reduced 2-fold for the waaO mutant and 500- 5,000 random mini-Tn10 mutants, 12 showed an increased fold and 12-fold, respectively, for the waaQ mutant compared tolerance to the LP system after a first screen, and for 4 of to the wild-type strain MG1655 (Table 3). The LMM-PDS5 these, the phenotype could be confirmed with a second test. and LMM-PDS6 mutants had no altered sensitivity to SDS or These mutants were cotransduced with mini-Tn10 by P1 trans- novobiocin (data not shown). TABLE 2. Locations of transposon insertions in four lactoperoxidase-tolerant mutants Orientation of transposon-encoded Knocked-out Coordinates of gene open Position of transposon Strain resistance marker relative to gene gene reading framea on coding strand coding strand LMM-PDS3 waaO 3801081–3800062 3801072 Same LMM-PDS4 waaQ 3806121–3805087 3805205 Same LMM-PDS5 ulaA 4417946–4419400 4418348 Opposite LMM-PDS6 lrp 0931818–0932312 0932016 Same a From Escherichia coli K-12 MG1655 complete genome (GenBank accession number U00096).
  • 4. VOL. 71, 2005 MUTANTS RESISTANT TO THE LACTOPEROXIDASE SYSTEM 3515 FIG. 3. SDS-PAGE gel of Coomassie blue-stained outer mem- brane proteins. Lanes: 1, MG1655; 2, LMM-PDS3 (waaO); 3, LMM- PDS4 (waaQ); 4, LMM-PDS1 (ompC); and 5, LMM-PDS2 (ompF). FIG. 2. LPS profiles of wild-type MG1655 (lane 1), LMM-PDS3 OmpC and OmpF bands were identified by comparisons to the corre- (waaO) (lane 2), LMM-PDS4 (waaQ) (lane 3), LMM-PDS5 (ulaA) sponding knockout reference strains. The OmpA band was presump- (lane 4), LMM-PDS6 (lrp) (lane 5), LMM-PDS1 (ompC) (lane 6), and tively identified based on its position relative to OmpC and OmpF and LMM-PDS2 (ompF) (lane 7). by comparison with the results of Brissette et al. (3) and Liu and Ferenci (19). Outer membrane protein content and permeability to hy- drophilic molecules. Since truncated LPS molecules can result Tolerance of ompC and ompF knockout mutants to the LP in reduced amounts of proteins, particularly porins, being in- system. The tolerance of the ompC and ompF mutants to the corporated into the outer membrane (1, 16), we conducted an LP system was analyzed and compared to that of the wild-type electrophoretic analysis of the outer membrane proteins of the strain MG1655 and one of the isolated LP-tolerant waa mu- waa mutants and of ompC and ompF knockout mutants for tants, using the same approach as that for the initial screening comparison. The latter allowed us to identify the OmpC and of the mutant collection. Both porin mutants showed an in- creased tolerance to the LP system, to a similar extent as that Downloaded from aem.asm.org by on May 4, 2010 OmpF proteins on the gel. For the same amount of outer membrane material, both mutants showed reduced quantities of the waaO mutant shown in Fig. 1C (data not shown). of the OmpC and OmpF proteins compared to those in strain MG1655 (Fig. 3, lanes 2 and 3). The amount of a third protein DISCUSSION of approximately 35 kDa that is present in outer membrane extracts of MG1655 and that has been proposed to be OmpA For this work, we isolated four transposon insertion mutants in other studies (3, 19) was slightly increased in both waa of the Escherichia coli K12 strain MG1655 that showed in- mutants. creased tolerance to the antimicrobial effect of the lactoper- Since OmpC and OmpF form channels allowing the passive oxidase system. Interestingly, this tolerance was specific to the diffusion of small hydrophilic molecules through the outer lactoperoxidase system since no increased resistance to H2O2 membrane, we speculated that the increased tolerance of the was observed (Fig. 1). This suggests that hypothiocyanate, the waa mutants to the LP system might stem from a reduced presumed active antimicrobial component of the lactoperoxi- uptake of OSCNϪ, the active component generated by the dase system when thiocyanate is used as a substrate, has a system. Therefore, we compared the outer membrane perme- mode of action which is different from that of H2O2. This idea abilities of the different strains by using a pNPP assay and an is further supported by the recent finding that the lactoperox- ampicillin sensitivity test (see Materials and Methods). Figure idase system elicits a distinct stress response in E. coli which is 4 shows that compared to wild-type MG1655, both waa mu- different from the responses induced by H2O2 and the super- tants exhibited a reduced uptake of pNPP, as was the case for oxide generator plumbagin (40). porin knockout mutants of ompC and ompF which were in- Two of the four mutants had an insertion in the central waa cluded in the experiment as controls. Resistance to the hydro- operon, which in E. coli K12 consists of 10 genes whose prod- philic antibiotic ampicillin was used as an alternative method ucts are involved in the assembly and decoration of the core to estimate the porin-dependent outer membrane permeabil- ity. Figure 5 shows that compared to wild-type E. coli MG1655, the waa mutants and the ompF mutant had an increased re- sistance to 5 ␮g/ml of ampicillin. In contrast, the ompC mutant showed a reduced resistance, probably because in this strain OmpF is still present and other proteins, including (the puta- tive) OmpA, are overexpressed (Fig. 3). TABLE 3. MICs of SDS and novobiocin for E. coli MG1655, LMM-PDS3 (waaO), and LMM-PDS4 (waaQ) MIC Strain FIG. 4. Outer membrane permeability of mutant strains relative to SDS (mg/ml) Novobiocin (␮g/ml) that of MG1655. The height of each bar is correlated with the absorp- MG1655 100 100 tion at 420 nm and thus with the degradation of p-nitrophenyl phos- LMM-PDS3 50 50 phate by alkaline phosphatase. Each bar represents the average of LMM-PDS4 0.2 12.5 three independent experiments, with the error bars corresponding to the standard deviation.
  • 5. 3516 DE SPIEGELEER ET AL. APPL. ENVIRON. MICROBIOL. via porins (21, 24, 53) and that is converted by the periplasmic alkaline phosphatase into p-nitrophenol, a yellow compound that can be quantified by its absorption at 420 nm. At low substrate concentrations and in the presence of excess alkaline phosphatase (by phoA overexpression from the plasmid pIV26 [21]), the uptake of pNPP rather than the availability of alka- line phosphatase is the rate-limiting step (23), and the increase in absorption at 420 nm is a measure of the outer membrane permeability. Resistance to the hydrophilic antibiotic ampicil- lin was used as an alternative method to estimate the porin- dependent outer membrane permeability. The validity of this approach is based on the findings that ampicillin passes the outer membrane barrier through the porins, especially OmpF FIG. 5. Growth curves for E. coli strains MG1655 (■), LMM-PDS3 (waaO) (F), LMM-PDS4 (waaQ) (Œ), LMM-PDS1 (ompC) (ϩ), and (30, 31), and that a reduction in porin content can increase the LMM-PDS2 (ompF) (ϫ) incubated at 37°C in LB supplemented with resistance to some antibiotics, including ampicillin (36, 37, 38). 5 ␮g/ml ampicillin. Each curve represents the averages of three inde- These methods demonstrated that the waaO and waaQ mu- pendent experiments. tants had a lower uptake of the hydrophilic molecules pNPP and ampicillin (Fig. 4 and 5). We believe that this was caused by the lower porin content of these strains, since a similar oligosaccharide of LPS (34). The LMM-PDS4 mutant has an reduction in pNPP permeability was apparent for OmpC and insertion in waaQ, the first gene of the operon, whose gene OmpF knockout strains and a similar ampicillin sensitivity was Downloaded from aem.asm.org by on May 4, 2010 product adds a heptose side chain to the last heptose of the seen for an OmpF knockout strain. A knockout of OmpC did inner core oligosaccharide. A nonpolar knockout mutation of not affect the ampicillin sensitivity of E. coli, but this can be this gene does not produce a particular phenotype (28, 49). explained by the facts that ampicillin preferentially passes the Therefore, the LPS truncation (Fig. 2) and SDS and novobio- outer membrane via OmpF (30, 31) and that the OmpC knock- cin sensitivity (Table 3) observed in our work suggest that the out strain still produces the OmpF porin (Fig. 3). Finally, the mini-Tn10 insertion in waaQ has a polar effect, knocking out finding that both OmpF and OmpC mutants proved to be the expression of the downstream genes in the operon and similarly resistant as the waa mutants to the lactoperoxidase producing a phenotype reminiscent of deep rough mutants of system further strengthens the hypothesis that reduced outer E. coli (28, 49). Specifically, we can anticipate that LPS in the membrane permeability for the hydrophilic OSCNϪ ion is the waaQ mutant will completely lack an outer core oligosaccha- basis of the tolerance of the waa mutants to the LP system. ride chain due to the knockout of waaG and, additionally, will A reduced net uptake through the outer membrane is the lack phosphoryl residues on both inner core heptoses due to basis of several emerging resistances to antimicrobial com- the knockout of waaP and waaY. The waaO knockout mutant, pounds in gram-negative bacteria (31, 44, 51). Pathogenic E. on the other hand, still has functional waaG and waaP genes, coli O157:H7 strains, for instance, exhibit an enhanced resis- and its LPS is thus predicted to retain an outer core oligosac- tance to antimicrobials compared to other E. coli strains, which charide consisting of one glucose residue and to lack only one is believed to stem from differences in the permeative proper- phosphoryl group on its inner core heptoses. The lack of an ties of their porins (24). Also, exposure to ampicillin results in extra phosphoryl residue in the waaQ LPS may explain the the rapid emergence of E. coli mutants lacking OmpF (31). extreme hypersensitivity of this mutant to the hydrophobic Although this mutation provides only a low level of resistance compounds SDS and novobiocin compared to the moderate to ampicillin, it may allow for the temporary survival of a hypersensitivity of the waaO strain. The hydrophobic proper- population that can subsequently acquire additional resistance ties of the waaQ LPS may also explain the difficulties that we mechanisms. Our work suggests that selection for this type of encountered in the electrophoretic analysis of this LPS (Fig. 2). antibiotic resistance may even occur naturally in the absence of Mutations leading to an altered LPS structure not only affect any antibiotic by selection for LP resistance in saliva, milk, the sensitivity of E. coli to hydrophobic compounds but can tears, and airway mucus. Heme peroxidases are part of the also compromise the proper folding and membrane integration nonspecific host defense mechanism of plants and animals. of outer membrane proteins such as porins and consequently Besides lactoperoxidase, myeloperoxidase is another heme alter the outer membrane’s permeability for hydrophilic sol- peroxidase that plays an important role in the killing of phago- utes (1, 6, 16, 18). The analysis shown in Fig. 3 confirmed that cytosed bacteria (11). However, its main substrate in phago- both waa mutants did indeed contain reduced amounts of cytes is ClϪ, which is oxidized to HClO (hypochlorous acid). In OmpC and OmpF. Since we were not aware of a method to view of the similar chemical structures and properties of the directly measure the uptake of hypothiocyanate ions OSCNϪ and ClOϪ ions, it can be expected that a reduction of (OSCNϪ), the presumed active antimicrobial species under porin-mediated outer membrane permeability will also provide our experimental conditions, through the outer membrane, we tolerance of the myeloperoxidase/ClϪ enzyme system. adopted two widely used methods for evaluating outer mem- Whether this will also increase the survival of porin-deficient brane permeability that make use of other hydrophilic solutes, mutants in phagocytes is unclear because the myeloperoxidase assuming that these would provide a valid indication of system is only one of multiple bactericidal mechanisms in these OSCNϪ permeation. The first method uses p-nitrophenyl cells (11). phosphate (pNPP), a hydrophilic molecule that enters the cell The development of a tolerance to OSCNϪ generated by the
  • 6. VOL. 71, 2005 MUTANTS RESISTANT TO THE LACTOPEROXIDASE SYSTEM 3517 LP system and/or of ClOϪ is also relevant in the context of 12. Heukeshoven, J., and R. Dernick. 1985. Simplified method for silver staining of proteins in polyacrylamide gels and the mechanism of silver staining. food preservation and disinfection. For example, the resistance Electrophoresis 6:103–112. of Salmonella to ClOϪ has been reported and several possible 13. Horton, B. S. 1995. Commercial utilization of minor milk components in the mechanisms have been suggested, but the role of porins was health and food industries. J. Dairy Sci. 78:2584–2589. 14. Hung, S. P., P. Baldi, and G. W. Hatfield. 2002. Global gene expression not investigated (27). Furthermore, besides studies of the po- profiling in Escherichia coli K12—the effects of leucine-responsive regulatory tential of “natural” preservative systems such as the LP system protein. J. Biol. Chem. 277:40309–40323. to increase the safety and extend the shelf-life of perishable 15. Kleckner, N., J. Bender, and S. Gottesman. 1991. Uses of transposons with emphasis on Tn10. Methods Enzymol. 204:139–180. foods and other products, studies are also needed to address 16. Koplow, J., and H. Goldfine. 1974. Alterations in outer membrane of cell- the potential emergence of LP tolerance. Finally, our research envelope of heptose-deficient mutants of Escherichia coli. J. Bacteriol. 117: 527–543. group has previously reported that a sublethal treatment with 17. Kussendrager, K. D., and A. C. M. van Hooijdonk. 2000. Lactoperoxidase: high hydrostatic pressure strongly sensitizes bacteria to the LP physico-chemical properties, occurrence, mechanism of action and applica- system, opening perspectives for the application of this com- tions. Br. J. Nutr. 84:S19–S25. 18. Laird, M. W., A. W. Kloser, and R. Misra. 1994. Assembly of LamB and bined treatment for mild food preservation (9, 10). The impli- OmpF in deep rough lipopolysaccharide mutants of Escherichia coli K-12. J. cations of the LP tolerance reported in the present work on the Bacteriol. 176:2259–2264. efficiency of this combined treatment should be further inves- 19. Liu, X., and T. Ferenci. 1998. Regulation of porin-mediated outer membrane permeability by nutrient limitation in Escherichia coli. J. Bacteriol. 180:3917– tigated. 3922. In this work, we also identified two LP-resistant mutants (lrp 20. Lovaas, E. 1992. Free-radical generation and coupled thiol oxidation by and ulaA) that were not further investigated. Lrp is a global lactoperoxidase/SCNϪ/H2O2. Free Radic. Biol. Med. 13:187–195. 21. Martinez, M. B., F. J. Schendel, M. C. Flickinger, and G. L. Nelsestuen. regulator that coordinates cellular metabolism with the nutri- 1992. In vivo kinetic-studies of clustered enzymes using overexpression of tional state of the environment and, as such, affects the expres- alkaline-phosphatase in Escherichia coli. FASEB J. 6:A460. 22. Martinez, M. B., M. C. Flickinger, and G. L. Nelsestuen. 1996. Accurate sion of multiple genes and operons, including some stress re- kinetic modeling of alkaline phosphatase in the Escherichia coli periplasm: Downloaded from aem.asm.org by on May 4, 2010 sponse genes (14, 42). Furthermore, Lrp-deficient mutants implications for enzyme properties and substrate diffusion. Biochemistry were found to possess a growth advantage during stationary 35:1179–1186. 23. Martinez, M. B., M. C. Flickinger, and G. L. Nelsestuen. 1999. Steady-state phase (GASP phenotype) (54). UlaA is involved in the utili- enzyme kinetics in the Escherichia coli periplasm: a model of a whole cell zation of L-ascorbic acid (50, 52), an antioxidant that can neu- biocatalyst. J. Biotechnol. 71:59–66. tralize OSCNϪ generated by the LP system. However, further 24. Martinez, M. B., M. Flickinger, L. Higgins, T. Krick, and G. L. Nelsestuen. 2001. Reduced outer membrane permeability of Escherichia coli O157:H7: work will be required to elucidate the precise mechanisms by suggested role of modified outer membrane porins and theoretical function which mutations in lrp and ulaA confer LP tolerance on E. coli. in resistance to antimicrobial agents. Biochemistry 40:11965–11974. 25. Mecsas, J., P. E. Rouviere, J. W. Erickson, T. J. Donohue, and C. A. Gross. 1993. The activity of sigma(E), an Escherichia coli heat-inducible sigma- ACKNOWLEDGMENTS factor, is modulated by expression of outer membrane proteins. Genes Dev. 7:2618–2628. This work was conducted in the framework of research projects 26. Miller, J. H. 1972. Experiments in molecular genetics. Cold Spring Harbor financed by the K.U. Leuven Research Fund (OT/01/35) and the Fund Laboratory Press, Cold Spring Harbor, N.Y. for Scientific Research Flanders (F.W.O. G.0195.02). 27. Mokgatla, R. M., P. A. Gouws, and V. S. Brozel. 2002. 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