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Dr. Kevin D. Brown
Complete Publication Listing
(1/9/2017)
Peer-Reviewed Publications
Brown, K.D. and L.I. Binder. 1990. Identification and characterization of a novel mammalian intermediate
filament-associated protein. Cell Motil. Cytoskel. 17:19-33.
Brown, K.D. and L.I. Binder. 1992. Identification of the IFAP gyronemin as the actin-binding protein filamin:
implication for a novel mechanism of cytoskeletal interaction. J. Cell Sci. 102:19-30.
Brown, K.D., R.P. Zinkowski, S.E. Hays, and L.I. Binder. 1993. Actin-binding protein (ABP) is a component of
bovine erythrocytes. Cell Motil. Cytoskel. 24:100-108.
Brown, K.D. and L.I. Binder. 1993. Expression of the cytoskeletal-associated protein filamin in adult rat
organs. Exp. Cell Res. 209:325-332.
Brown, K.D., R.M.R. Coulson, T.J. Yen, and D.W. Cleveland. 1994. Cyclin-like accumulation and loss of the
putative kinetochore motor CENP-E results from coupling continuous synthesis with specific degradation
at the end of mitosis. J. Cell Biol. 125:1303-1312.
Balczon, R.D., L. Bao, W.E. Zimmer, K.D. Brown, R.P. Zinkowski, and B.R. Brinkley. 1995. The dissociation of
centrosome replication events from cycles of DNA synthesis and mitotic division in hydroxyurea-arrested
CHO cells. J. Cell Biol. 130:105-116.
Quinton, T.M., K.D. Brown, and W.L. Dean. 1996. Inositol 1,4,5-triphosphate-mediated calcium release from
platelet internal membranes is regulated by differential phosphorylation. Biochemistry 35:6865-6871.
Brown, K.D., K.W. Wood, and D.W. Cleveland. 1996. The kinesin-like protein CENP-E is kinetochore-
associated throughout poleward segregation during anaphase-A. J. Cell Sci. 109:961-969.
Gilad, S., A. Bar-Shira, R. Harnik, D. Shkedi, Y. Ziv, R. Hosravi, K. Brown, L. Vanagaite, G. Xu, M. Frydman,
M. Lavin, D. Hill, D.A. Tagle, and Y. Shiloh. 1996. Ataxia-telangiectasia: founder effect among North
African Jews. Hum. Mol. Genet. 5: 2033-2037.
Duesbery N.S., T. Choi, K. D. Brown, K.W. Wood, J. Resau, K. Fukasawa, D.W. Cleveland, and G.F. Vande
Woude. 1997. CENP-E is an essential kinetochore motor in maturing oocytes and is masked during Mos-
dependent, cell cycle arrest at metaphase II. Proc. Natl. Acad. Sci. USA 94: 9165-9170.
Brown, K.D., Y. Ziv, S.N. Sadandanan, L. Chessa, F.S. Collins, Y. Shiloh, and D.A. Tagle. 1997. The ataxia-
telangiectasia gene product, a constitutively expressed nuclear protein that is not upregulated following
genome damage. Proc. Natl. Acad. Sci. 94: 1840-1845.
Brown, K.D.*, C. Barlow*, C.-X. Deng, D. A. Tagle , and A. Wynshaw-Boris. 1997. Atm selectively regulates
p53-dependent cell cycle checkpoints and apoptotic pathways. Nature Genetics 17:453-
456. [*contributed equally]
Barlow, C., M. Liyanage, P. Moens, K. Nagashima, K.D. Brown, S. Rottinghaus, S. Jackson, D.
Tagle,T. Ried, and A. Wynshaw-Boris. 1998. Atm deficiency results in severe meiotic disruption as early
as leptonema of prophase I. Development 125:4007-4017.
Guru, S.C., J.S. Crabtree, K.D. Brown, K.J. Dunn, P. Manickam, N.B. Prasad, D. Wangsa, A.L. Burns, A.M.
Spiegel, S.J. Marx, W.J. Pavan, F.S. Collins, S.C. Chandrasekharappa. 1999. Isolation, genomic
organization and expression analysis of Men1, the murine homolog of the MEN1 gene. Mammal. Genome
10:592-596.
Brown, K.D., C. Barlow, and A. Wynshaw-Boris. 1999. Multiple ATM-dependent pathways: an explanation for
pleiotropy. Am. J. Hum. Genet. 64:46-50
Barlow, C., C. Ribaut-Barassin, T.A. Zwingman, A.J. Pope, K.D. Brown, J.W. Owens, D. Larson, E.A.
Harrington, A.M. Haeberle, J.Mariani, M. Eckhaus, K. Herrup, Y. Bailly, A. Wynshaw-Boris. 2000. ATM is
a cytoplasmic protein in mouse brain required to prevent lysosomal accumulation. Proc. Natl. Acad. Sci.
97:871-876.
Brown, K.D., T. Lataxes, S. Shangary, J. Mannino, J. Giardina, J. Chen, and R. Baskaran. 2000. Ionizing
radiation exposure results in upregulation of Ku70 via a p53 / ATM dependent mechanism. J. Biol. Chem.
275:6651-6656.
Shangary, S. , K.D. Brown , A.W. Adamson, S. Edmonson , T. Pandita , J. Yalowich , G.E. Taccioli, and R.
Baskaran. 2000. Regulation of DNA-PK activity by IR-activated Abl kinase is an ATM-dependent process.
J. Biol. Chem. 275:30163-30168.
Allen D.M., H. van Praag, J. Ray, Z. Weaver, C.J. Winrow, T.A. Carter, R. Braquet, E. Harrington, T. Ried, K.D.
Brown, F.H. Gage, and C. Barlow 2001. Ataxia telangiectasia mutated is essential during adult
neurogenesis. Genes Dev. 15:554-566.
Mannino, J.L., W.J. Kim, M. Wernick, S.V. Nguyen, R. Braquet, A.W. Adamson, Z. Den, W.-J. Kim, M.A.
Batzer, C.C. Collins, and K.D. Brown. 2001. Evidence for alternate splicing within the mRNA transcript of
the DNA damage-response kinase ATR. Gene 272:35-43.
Kim, W-J, Q.N. Vo, M. Shrivastav, T.A. Lataxes, and K. D. Brown. 2002. Aberrant methylation of the ATM
promoter correlates with increased radiosensitivity in a human colorectal tumor cell line. Oncogene
21:3864-3871.
Zhan, Q., Jin, S., Ng, B., Plisket, J., Shangary, S., Rathi, A., Brown, K.D., and R. Baskaran. 2002. Caspase-
mediated cleavage of BRCA1 during UV-induced apoptosis. Oncogene 21:5335-5345,
Adamson, A.W., W.-J. Kim, S. Shangary, R. Baskaran, and K. D. Brown. 2002. ATM is activated in
response to N-Methyl-N'-nitro-N-nitrosoguanidine-induced DNA alkylation. J. Biol. Chem. 277:38222-
28229.
Brown, K.D., A. Rathi, R. Kamath, D.I. Beardsley, Q. Zhan, J.L. Mannino, and R. Baskaran 2003. The
mismatch repair system is required for S-phase checkpoint activation. Nature Genet. 33:80-84.
Beardsley, D.I., Kowbel, D., Lataxes, T.A., Mannino, J.M., Kim, W.J., Xin, H., Collins, C.C. and Brown, K.D.
2003. Characterization of the Novel Amplified in Breast Cancer-1 (NABC1) Gene Product. Exp. Cell Res
290:402-413.
Ai, L. Vo, Q.N., Zuo, C., Suen, J.Y., Hanna, E. Brown, K.D. and Fan, C.-Y. 2004. Ataxia-Telangiectasia-
Mutated (ATM) Gene in Head and Neck Squamous Cell Carcinoma: Promoter Methylation with Clinical
Correlation in 100 Cases. Cancer Epidemiol Biomarkers Prev. 13:150-156
Wakeman, T.P., Kim, W.-J., Callens, S, Chiu, A., Brown, K.D., Xu, B. 2004. The ATM-SMC1 Pathway is
Essential for activation of the Chromium [VI]-induced S-Phase Checkpoint. Mutation Res. 554:241-
251.
Vo, Q.N., Kim, W.-J., Cvitanovic, L., Boudreau, D.A., Ginzinger, D.G., and Brown, K.D. 2004. The ATM
gene is a target for epigenetic silencing in locally advanced breast cancer. Oncogene 23:9432-9437.
Singh, S.V., Antosiewicz, A.H., Singh, A.V., Lew, K.L., Kamath, R., Brown, K.D., Zhang, L., Baskaran R. 2004.
Sulforaphane-Induced G2/M Phase Cell Cycle Arrest Involves Checkpoint Kinase 2 Mediated
Phosphorylation of Cdc25C. J. Biol. Chem. 279:25813-22.
Vaidyanathan, G., Cismowski, M., Wang, G., Vincent, T.S., Brown, K.D., Lanier, S.M. 2004. The Ras-related
protein AGS1/RASD1 suppresses cell growth. Oncogene 23:5858-63
Kim, W.-J., Adamson, A.W., Beardsley, D.I., and Brown, K.D. 2005. The monofunctional alkylating agent
N-methyl-N’-nitro-N-nitrosoguanidine triggers apoptosis through p53-dependent and -independent
pathways. Toxicol. Appl. Pharm. 202:84-98.
Adamson, A.W., Beardsley, D.I., Kim, W-J, Gao, Y., Baskaran, R. and Brown, K.D. 2005. Methylator-
Induced, Mismatch Repair-Dependent G2 Arrest is Activated Through Chk1 and Chk2. Mol. Biol. Cell.
16:1513-26
Beardsley, D.I., Kim, W.-J. and Brown, K.D. 2005. N-methyl-N’-nitro-N-nitrosoguanidine activates cell
cycle arrest through distinct mechanisms activated in a dose-dependent manner. Mol. Pharm.
68:1049-1060
Bolt, J., Vo, Q.N., Kim, W.-J., McWhorter, A.J., Thomson, J., Hagensee, M.E., Friedlander, P., Brown,
K.D., Gilbert, J. 2005. The ATM/p53 pathway is commonly targeted for inactivation in squamous cell
carcinoma of the head and neck (SCCHN) by multiple molecular mechanisms. Oral Oncology 41:1013-
1020.
Turner J, Koumenis C, Kute TE, Planalp RP, Brechbiel MW, Beardsley DI, Cody B, Brown KD, Torti FM, Torti
SV. 2005. Tachpyridine, a metal chelator, induces G2 cell cycle arrest, activates checkpoint kinases, and
sensitizes cells to ionizing radiation. Blood 106:3191-3199.
Ai, L, Tao, Q, Zhong, S, Fields, CR, Kim, W-J, Lee, MW, Cui, Y, Brown, KD and Robertson, KD. 2006.
Inactivation of Wnt inhibitory factor-1 (WIF1) expression by epigenetic silencing is a common event in
breast cancer Carcinogenesis 27:1341-48.
Ai, L, Kim, W-J, Kim,
T-Y, Fields, CR, Massoll, NA, Robertson, KD, Brown, KD. 2006. Epigenetic silencing of
the tumor suppressor cystatin M occurs during breast cancer progression. Cancer Research 66:7899-
7909.
Kim, WJ, Rajasekaran, B, and Brown, KD. 2007. MLH1 and ATM-dependent MAP kinase signaling is
activated through c-Abl in response to the alkylator N-methyl-N’-nitro-N-nitrosoguanidine J. Biol. Chem.
282:32021-32031.
Lee, MW, Kim, WJ, Beardsley, DI and Brown, KD. 2007. N-methyl-N’-nitro-N-nitrosoguanidine activates
both caspase-dependent and independent cell death mechanisms in human fibroblasts DNA and Cell
Biol. 26: 683-694.
Brown, KD and Robertson, KD. 2007. DNMT1 knockout delivers a strong blow to genome stability and
cell viability. Nature Genetics 39:289-90.
Palii, S., Van Emburgh, B.O., Sankpal, U.T, Brown, K.D. and Robertson, K.D. 2008. The DNA methylation
inhibitor 5-aza-2’-deoxycytidine (5-azadC) induces reversible genome-wide DNA damage that is distinctly
influenced by DNA methyltransferases (DNMTs) 1 and 3B. Molec. Cell Biol. 28:752-71.
Zheng, L., Asprodites, N., Keene, A.H., Rodriguez, P., K.D. Brown, and Davila, E. 2008. TLR engagement on
CD4 T lymphocytes represses γ-radiation–induced apoptosis through activation of checkpoint kinase
response elements. Blood 111(5):2704-13.
Ai, L., Kim, W-J, Demircan,
B., Dyer, L.M., Bray, K.J., Skehan, R.R, Massoll, N.A., Brown, K.D. 2008. The
transglutaminase 2 gene (TGM2), a potential molecular marker for chemotherapeutic drug sensitivity, is
epigenetically silenced in breast cancer. Carcinogenesis 29(3):510-8.
Qiu, J., Ai, L., Ramachandran, C., Yao,B., Gopalakrishnan, S., Fields, C.R., Delmas, A.L,. Dyer, L.M., Melnick,
S.J., Yachnis, A.T., Schwartz, P.H., Fine, H.A., Brown, K.D. and Robertson, K.D. 2008. Invasion
suppressor cystatin E/M (CST6): High-level cell type-specific expression in normal brain and epigenetic
silencing in brain tumors. Lab Invest. 9:910-25.
Demircan, B., Dyer, LM, Gerace, M, Lobenhofer, E.K., Robertson, KD and Brown, KD. 2009. Comparative
epigenomics of human and mouse mammary tumors. Genes, Chrom and Cancer 48:83-97.
Orlando, FA, Brown, KD. 2009. Unraveling Breast Cancer Heterogeneity Through Transcriptomic and
Epigenomic Analysis. Ann. Surg. Oncol. 16(8):2270-9.
Darst RP, Pardo CE, Ai L, Brown KD, Kladde MP. 2010. Bisulfite sequencing of DNA. Curr Protoc Mol Biol.
Chapter 7:Unit 7.9.1-17.
Jiang Z, Jin S, Yalowich JC, Brown KD, Rajasekaran B. 2010. The Mismatch Repair System Modulates
Curcumin Sensitivity through Induction of DNA Strand Breaks and Activation of G2-M Checkpoint. Mol
Cancer Ther. 9:558-68.
Dyer LM, Schooler KP, Ai L, Klop C, Qiu J, Robertson KD, Brown KD. 2011. The transglutaminase 2 gene is
aberrantly hypermethylated in glioma. J Neurooncol. 101:429-40.
Ha K, Lee GE, Palii SS, Brown KD, Takeda Y, Liu K, Bhalla KN, Robertson KD. 2011. Rapid and transient
recruitment of DNMT1 to DNA double-strand breaks is mediated by its interaction with multiple components
of the DNA damage response machinery. Hum Mol Genet. 20:126-40.
Delmas, AL, Riggs, BM, Pardo, CE, Dyer, LM, Darst, RP, Izumchenko, E, Monroe, M, Hakam, A, Kladde, MP,
Siegel, EM and Brown, KD. 2011. WIF1 is a Frequent Target for Epigenetic Silencing in Squamous Cell
Carcinoma of the Cervix. Carcinogenesis 32:1625-33.
Chen M, Shabashvili D, Nawab A, Yang SX, Dyer LM, Brown KD, Hollingshead M, Hunter KW, Kaye FJ,
Hochwald SN, Marquez VE, Steeg P, Zajac-Kaye M. 2012. DNA methyltransferase inhibitor, zebularine,
delays tumor growth and induces apoptosis in a genetically engineered mouse model of breast cancer.
Mol Cancer Ther. 11:370-82.
Ai, L, Skehan, RR, Saydi, J, Lin, T, and Brown, KD. 2012. Ataxia-Telangiectasia, Mutated (ATM) / Nuclear
Factor Kappa light chain enhancer of activated B cells (NF kappaB) Signaling Controls Basal and DNA
Damage-Induced Transglutaminase 2 Expression. J. Biol. Chem 287:18330-41.
Izumchenko E, Saydi J, and KD Brown. 2012. Exonuclease 1 (Exo1) is required for activating response to
SN1 DNA methylating agents. DNA Repair 11(12):951-64.
Brown, KD. 2013. Transglutaminase 2 and NF-κB: an odd couple that shapes breast cancer phenotype.
Breast Cancer Res Treat. 137(2):329-36.
Ai L, Kim WJ, Alpay M, Tang M, Pardo CE, Hatakeyama S, May WS, Kladde MP, Heldermon CD, Siegel
EM, Brown KD. 2014. TRIM29 suppresses TWIST1 and invasive breast cancer behavior. Cancer Res.
74(17):4875-87
Salz T, Deng C, Pampo C, Siemann D, Qiu Y, Brown K, Huang S. 2015. Histone methyltransferase hSETD1A
is a Novel Regulator of Metastasis in Breast Cancer. Mol Cancer Res. 13(3):461-9
Alpay M, Backman LR, Cheng X, Dukel M, Kim WJ, Ai L, Brown KD. 2015. Oxidative stress shapes breast
cancer phenotype through chronic activation of ATM-dependent signaling. Breast Cancer Res Treat.
151(1):75-87
Cheng X, Byrne M, Brown KD, Konopleva MY, Kornblau SM, Bennett RL, May WS. 2015. PKR inhibits the
DNA damage response, and is associated with poor survival in AML and accelerated leukemia in NHD13
mice. Blood. 126(13):1585-94.
Dükel M, Streitfeld WS, Tang TC, Backman LR, Ai L, May WS, Brown KD. 2016. The Breast Cancer Tumor
Suppressor TRIM29 is Expressed via ATM-Dependent Signaling in Response to Hypoxia. J Biol Chem.
291(41): 21541-52.
Dyer LM, Ai L, Xu J, Kim WJ, Tang M, Reinhard MK, Backman LRF, Treiber N, Scharffetter-Kochanek K,
Leeuwenburgh C, McKinnon PJ, and Brown KD. ATM is required for SOD2 Expression and Homeostasis
within the Lactating Mammary Gland. Developmental Biology (in revision)
Book Chapters
Balczon, R.D., L. Bao, W.E. Zimmer, K.D. Brown, R.P. Zinkowski, and B.R. Brinkley. 1994. Analysis of
centrosome replication events in mammalian cells. In : The Cell Cycle: Regulators, Targets, and Clinical
Applications. V.W. Hu, ed. Plenum Press, New York.
Brown, K.D. and D.A. Tagle. 1997. Molecular perspectives on cancer, the cell cycle and the inherited disorder
ataxia-telangiectasia. In: Progress in Clinical and Biological Research Vol. 369: Etiology of Breast and
Gynecological Cancers. C.M. Aldaz, M. N. Gould, J. McLachlan, T.J. Slaga, eds. Wylie-Liss, New York.
Shivastav, M. and K.D. Brown. 2002. ATM and cancer risk. In : Recent Research Developments in Human
Genetics. Research Signpost, Kerala, India. 1:63-81.
Demircan B, and KD Brown. 2008. Cancer Epigenetics. In: Encyclopedia of Cancer. Ed: Manfred Schwab.
Springer-Verlag, New York, NY.
Orlando, FA, Dyer, LM, and KD Brown 2009. Chapter 12 - Epigenetic Analysis in Breast Cancer Progression.
In: Epigenetics: Mechanisms, Functions and Human Effects. Eds: B. Pinter and Z. Meszaros. Nova
Science Publishers Hauppauge, New York.
Orlando, FA, Dyer, LM, and KD Brown. 2009. Chapter 13 - Cancer Epigenetics. In: Epigenetics:
Mechanisms, Functions and Human Effects. Eds: B. Pinter and Z. Meszaros. Nova Science Publishers
Hauppauge, New York.

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Publication listing

  • 1. Dr. Kevin D. Brown Complete Publication Listing (1/9/2017) Peer-Reviewed Publications Brown, K.D. and L.I. Binder. 1990. Identification and characterization of a novel mammalian intermediate filament-associated protein. Cell Motil. Cytoskel. 17:19-33. Brown, K.D. and L.I. Binder. 1992. Identification of the IFAP gyronemin as the actin-binding protein filamin: implication for a novel mechanism of cytoskeletal interaction. J. Cell Sci. 102:19-30. Brown, K.D., R.P. Zinkowski, S.E. Hays, and L.I. Binder. 1993. Actin-binding protein (ABP) is a component of bovine erythrocytes. Cell Motil. Cytoskel. 24:100-108. Brown, K.D. and L.I. Binder. 1993. Expression of the cytoskeletal-associated protein filamin in adult rat organs. Exp. Cell Res. 209:325-332. Brown, K.D., R.M.R. Coulson, T.J. Yen, and D.W. Cleveland. 1994. Cyclin-like accumulation and loss of the putative kinetochore motor CENP-E results from coupling continuous synthesis with specific degradation at the end of mitosis. J. Cell Biol. 125:1303-1312. Balczon, R.D., L. Bao, W.E. Zimmer, K.D. Brown, R.P. Zinkowski, and B.R. Brinkley. 1995. The dissociation of centrosome replication events from cycles of DNA synthesis and mitotic division in hydroxyurea-arrested CHO cells. J. Cell Biol. 130:105-116. Quinton, T.M., K.D. Brown, and W.L. Dean. 1996. Inositol 1,4,5-triphosphate-mediated calcium release from platelet internal membranes is regulated by differential phosphorylation. Biochemistry 35:6865-6871. Brown, K.D., K.W. Wood, and D.W. Cleveland. 1996. The kinesin-like protein CENP-E is kinetochore- associated throughout poleward segregation during anaphase-A. J. Cell Sci. 109:961-969. Gilad, S., A. Bar-Shira, R. Harnik, D. Shkedi, Y. Ziv, R. Hosravi, K. Brown, L. Vanagaite, G. Xu, M. Frydman, M. Lavin, D. Hill, D.A. Tagle, and Y. Shiloh. 1996. Ataxia-telangiectasia: founder effect among North African Jews. Hum. Mol. Genet. 5: 2033-2037. Duesbery N.S., T. Choi, K. D. Brown, K.W. Wood, J. Resau, K. Fukasawa, D.W. Cleveland, and G.F. Vande Woude. 1997. CENP-E is an essential kinetochore motor in maturing oocytes and is masked during Mos- dependent, cell cycle arrest at metaphase II. Proc. Natl. Acad. Sci. USA 94: 9165-9170. Brown, K.D., Y. Ziv, S.N. Sadandanan, L. Chessa, F.S. Collins, Y. Shiloh, and D.A. Tagle. 1997. The ataxia- telangiectasia gene product, a constitutively expressed nuclear protein that is not upregulated following genome damage. Proc. Natl. Acad. Sci. 94: 1840-1845. Brown, K.D.*, C. Barlow*, C.-X. Deng, D. A. Tagle , and A. Wynshaw-Boris. 1997. Atm selectively regulates p53-dependent cell cycle checkpoints and apoptotic pathways. Nature Genetics 17:453- 456. [*contributed equally] Barlow, C., M. Liyanage, P. Moens, K. Nagashima, K.D. Brown, S. Rottinghaus, S. Jackson, D. Tagle,T. Ried, and A. Wynshaw-Boris. 1998. Atm deficiency results in severe meiotic disruption as early as leptonema of prophase I. Development 125:4007-4017. Guru, S.C., J.S. Crabtree, K.D. Brown, K.J. Dunn, P. Manickam, N.B. Prasad, D. Wangsa, A.L. Burns, A.M. Spiegel, S.J. Marx, W.J. Pavan, F.S. Collins, S.C. Chandrasekharappa. 1999. Isolation, genomic organization and expression analysis of Men1, the murine homolog of the MEN1 gene. Mammal. Genome 10:592-596. Brown, K.D., C. Barlow, and A. Wynshaw-Boris. 1999. Multiple ATM-dependent pathways: an explanation for pleiotropy. Am. J. Hum. Genet. 64:46-50 Barlow, C., C. Ribaut-Barassin, T.A. Zwingman, A.J. Pope, K.D. Brown, J.W. Owens, D. Larson, E.A. Harrington, A.M. Haeberle, J.Mariani, M. Eckhaus, K. Herrup, Y. Bailly, A. Wynshaw-Boris. 2000. ATM is a cytoplasmic protein in mouse brain required to prevent lysosomal accumulation. Proc. Natl. Acad. Sci. 97:871-876.
  • 2. Brown, K.D., T. Lataxes, S. Shangary, J. Mannino, J. Giardina, J. Chen, and R. Baskaran. 2000. Ionizing radiation exposure results in upregulation of Ku70 via a p53 / ATM dependent mechanism. J. Biol. Chem. 275:6651-6656. Shangary, S. , K.D. Brown , A.W. Adamson, S. Edmonson , T. Pandita , J. Yalowich , G.E. Taccioli, and R. Baskaran. 2000. Regulation of DNA-PK activity by IR-activated Abl kinase is an ATM-dependent process. J. Biol. Chem. 275:30163-30168. Allen D.M., H. van Praag, J. Ray, Z. Weaver, C.J. Winrow, T.A. Carter, R. Braquet, E. Harrington, T. Ried, K.D. Brown, F.H. Gage, and C. Barlow 2001. Ataxia telangiectasia mutated is essential during adult neurogenesis. Genes Dev. 15:554-566. Mannino, J.L., W.J. Kim, M. Wernick, S.V. Nguyen, R. Braquet, A.W. Adamson, Z. Den, W.-J. Kim, M.A. Batzer, C.C. Collins, and K.D. Brown. 2001. Evidence for alternate splicing within the mRNA transcript of the DNA damage-response kinase ATR. Gene 272:35-43. Kim, W-J, Q.N. Vo, M. Shrivastav, T.A. Lataxes, and K. D. Brown. 2002. Aberrant methylation of the ATM promoter correlates with increased radiosensitivity in a human colorectal tumor cell line. Oncogene 21:3864-3871. Zhan, Q., Jin, S., Ng, B., Plisket, J., Shangary, S., Rathi, A., Brown, K.D., and R. Baskaran. 2002. Caspase- mediated cleavage of BRCA1 during UV-induced apoptosis. Oncogene 21:5335-5345, Adamson, A.W., W.-J. Kim, S. Shangary, R. Baskaran, and K. D. Brown. 2002. ATM is activated in response to N-Methyl-N'-nitro-N-nitrosoguanidine-induced DNA alkylation. J. Biol. Chem. 277:38222- 28229. Brown, K.D., A. Rathi, R. Kamath, D.I. Beardsley, Q. Zhan, J.L. Mannino, and R. Baskaran 2003. The mismatch repair system is required for S-phase checkpoint activation. Nature Genet. 33:80-84. Beardsley, D.I., Kowbel, D., Lataxes, T.A., Mannino, J.M., Kim, W.J., Xin, H., Collins, C.C. and Brown, K.D. 2003. Characterization of the Novel Amplified in Breast Cancer-1 (NABC1) Gene Product. Exp. Cell Res 290:402-413. Ai, L. Vo, Q.N., Zuo, C., Suen, J.Y., Hanna, E. Brown, K.D. and Fan, C.-Y. 2004. Ataxia-Telangiectasia- Mutated (ATM) Gene in Head and Neck Squamous Cell Carcinoma: Promoter Methylation with Clinical Correlation in 100 Cases. Cancer Epidemiol Biomarkers Prev. 13:150-156 Wakeman, T.P., Kim, W.-J., Callens, S, Chiu, A., Brown, K.D., Xu, B. 2004. The ATM-SMC1 Pathway is Essential for activation of the Chromium [VI]-induced S-Phase Checkpoint. Mutation Res. 554:241- 251. Vo, Q.N., Kim, W.-J., Cvitanovic, L., Boudreau, D.A., Ginzinger, D.G., and Brown, K.D. 2004. The ATM gene is a target for epigenetic silencing in locally advanced breast cancer. Oncogene 23:9432-9437. Singh, S.V., Antosiewicz, A.H., Singh, A.V., Lew, K.L., Kamath, R., Brown, K.D., Zhang, L., Baskaran R. 2004. Sulforaphane-Induced G2/M Phase Cell Cycle Arrest Involves Checkpoint Kinase 2 Mediated Phosphorylation of Cdc25C. J. Biol. Chem. 279:25813-22. Vaidyanathan, G., Cismowski, M., Wang, G., Vincent, T.S., Brown, K.D., Lanier, S.M. 2004. The Ras-related protein AGS1/RASD1 suppresses cell growth. Oncogene 23:5858-63 Kim, W.-J., Adamson, A.W., Beardsley, D.I., and Brown, K.D. 2005. The monofunctional alkylating agent N-methyl-N’-nitro-N-nitrosoguanidine triggers apoptosis through p53-dependent and -independent pathways. Toxicol. Appl. Pharm. 202:84-98. Adamson, A.W., Beardsley, D.I., Kim, W-J, Gao, Y., Baskaran, R. and Brown, K.D. 2005. Methylator- Induced, Mismatch Repair-Dependent G2 Arrest is Activated Through Chk1 and Chk2. Mol. Biol. Cell. 16:1513-26 Beardsley, D.I., Kim, W.-J. and Brown, K.D. 2005. N-methyl-N’-nitro-N-nitrosoguanidine activates cell cycle arrest through distinct mechanisms activated in a dose-dependent manner. Mol. Pharm. 68:1049-1060
  • 3. Bolt, J., Vo, Q.N., Kim, W.-J., McWhorter, A.J., Thomson, J., Hagensee, M.E., Friedlander, P., Brown, K.D., Gilbert, J. 2005. The ATM/p53 pathway is commonly targeted for inactivation in squamous cell carcinoma of the head and neck (SCCHN) by multiple molecular mechanisms. Oral Oncology 41:1013- 1020. Turner J, Koumenis C, Kute TE, Planalp RP, Brechbiel MW, Beardsley DI, Cody B, Brown KD, Torti FM, Torti SV. 2005. Tachpyridine, a metal chelator, induces G2 cell cycle arrest, activates checkpoint kinases, and sensitizes cells to ionizing radiation. Blood 106:3191-3199. Ai, L, Tao, Q, Zhong, S, Fields, CR, Kim, W-J, Lee, MW, Cui, Y, Brown, KD and Robertson, KD. 2006. Inactivation of Wnt inhibitory factor-1 (WIF1) expression by epigenetic silencing is a common event in breast cancer Carcinogenesis 27:1341-48. Ai, L, Kim, W-J, Kim, T-Y, Fields, CR, Massoll, NA, Robertson, KD, Brown, KD. 2006. Epigenetic silencing of the tumor suppressor cystatin M occurs during breast cancer progression. Cancer Research 66:7899- 7909. Kim, WJ, Rajasekaran, B, and Brown, KD. 2007. MLH1 and ATM-dependent MAP kinase signaling is activated through c-Abl in response to the alkylator N-methyl-N’-nitro-N-nitrosoguanidine J. Biol. Chem. 282:32021-32031. Lee, MW, Kim, WJ, Beardsley, DI and Brown, KD. 2007. N-methyl-N’-nitro-N-nitrosoguanidine activates both caspase-dependent and independent cell death mechanisms in human fibroblasts DNA and Cell Biol. 26: 683-694. Brown, KD and Robertson, KD. 2007. DNMT1 knockout delivers a strong blow to genome stability and cell viability. Nature Genetics 39:289-90. Palii, S., Van Emburgh, B.O., Sankpal, U.T, Brown, K.D. and Robertson, K.D. 2008. The DNA methylation inhibitor 5-aza-2’-deoxycytidine (5-azadC) induces reversible genome-wide DNA damage that is distinctly influenced by DNA methyltransferases (DNMTs) 1 and 3B. Molec. Cell Biol. 28:752-71. Zheng, L., Asprodites, N., Keene, A.H., Rodriguez, P., K.D. Brown, and Davila, E. 2008. TLR engagement on CD4 T lymphocytes represses γ-radiation–induced apoptosis through activation of checkpoint kinase response elements. Blood 111(5):2704-13. Ai, L., Kim, W-J, Demircan, B., Dyer, L.M., Bray, K.J., Skehan, R.R, Massoll, N.A., Brown, K.D. 2008. The transglutaminase 2 gene (TGM2), a potential molecular marker for chemotherapeutic drug sensitivity, is epigenetically silenced in breast cancer. Carcinogenesis 29(3):510-8. Qiu, J., Ai, L., Ramachandran, C., Yao,B., Gopalakrishnan, S., Fields, C.R., Delmas, A.L,. Dyer, L.M., Melnick, S.J., Yachnis, A.T., Schwartz, P.H., Fine, H.A., Brown, K.D. and Robertson, K.D. 2008. Invasion suppressor cystatin E/M (CST6): High-level cell type-specific expression in normal brain and epigenetic silencing in brain tumors. Lab Invest. 9:910-25. Demircan, B., Dyer, LM, Gerace, M, Lobenhofer, E.K., Robertson, KD and Brown, KD. 2009. Comparative epigenomics of human and mouse mammary tumors. Genes, Chrom and Cancer 48:83-97. Orlando, FA, Brown, KD. 2009. Unraveling Breast Cancer Heterogeneity Through Transcriptomic and Epigenomic Analysis. Ann. Surg. Oncol. 16(8):2270-9. Darst RP, Pardo CE, Ai L, Brown KD, Kladde MP. 2010. Bisulfite sequencing of DNA. Curr Protoc Mol Biol. Chapter 7:Unit 7.9.1-17. Jiang Z, Jin S, Yalowich JC, Brown KD, Rajasekaran B. 2010. The Mismatch Repair System Modulates Curcumin Sensitivity through Induction of DNA Strand Breaks and Activation of G2-M Checkpoint. Mol Cancer Ther. 9:558-68. Dyer LM, Schooler KP, Ai L, Klop C, Qiu J, Robertson KD, Brown KD. 2011. The transglutaminase 2 gene is aberrantly hypermethylated in glioma. J Neurooncol. 101:429-40. Ha K, Lee GE, Palii SS, Brown KD, Takeda Y, Liu K, Bhalla KN, Robertson KD. 2011. Rapid and transient recruitment of DNMT1 to DNA double-strand breaks is mediated by its interaction with multiple components of the DNA damage response machinery. Hum Mol Genet. 20:126-40.
  • 4. Delmas, AL, Riggs, BM, Pardo, CE, Dyer, LM, Darst, RP, Izumchenko, E, Monroe, M, Hakam, A, Kladde, MP, Siegel, EM and Brown, KD. 2011. WIF1 is a Frequent Target for Epigenetic Silencing in Squamous Cell Carcinoma of the Cervix. Carcinogenesis 32:1625-33. Chen M, Shabashvili D, Nawab A, Yang SX, Dyer LM, Brown KD, Hollingshead M, Hunter KW, Kaye FJ, Hochwald SN, Marquez VE, Steeg P, Zajac-Kaye M. 2012. DNA methyltransferase inhibitor, zebularine, delays tumor growth and induces apoptosis in a genetically engineered mouse model of breast cancer. Mol Cancer Ther. 11:370-82. Ai, L, Skehan, RR, Saydi, J, Lin, T, and Brown, KD. 2012. Ataxia-Telangiectasia, Mutated (ATM) / Nuclear Factor Kappa light chain enhancer of activated B cells (NF kappaB) Signaling Controls Basal and DNA Damage-Induced Transglutaminase 2 Expression. J. Biol. Chem 287:18330-41. Izumchenko E, Saydi J, and KD Brown. 2012. Exonuclease 1 (Exo1) is required for activating response to SN1 DNA methylating agents. DNA Repair 11(12):951-64. Brown, KD. 2013. Transglutaminase 2 and NF-κB: an odd couple that shapes breast cancer phenotype. Breast Cancer Res Treat. 137(2):329-36. Ai L, Kim WJ, Alpay M, Tang M, Pardo CE, Hatakeyama S, May WS, Kladde MP, Heldermon CD, Siegel EM, Brown KD. 2014. TRIM29 suppresses TWIST1 and invasive breast cancer behavior. Cancer Res. 74(17):4875-87 Salz T, Deng C, Pampo C, Siemann D, Qiu Y, Brown K, Huang S. 2015. Histone methyltransferase hSETD1A is a Novel Regulator of Metastasis in Breast Cancer. Mol Cancer Res. 13(3):461-9 Alpay M, Backman LR, Cheng X, Dukel M, Kim WJ, Ai L, Brown KD. 2015. Oxidative stress shapes breast cancer phenotype through chronic activation of ATM-dependent signaling. Breast Cancer Res Treat. 151(1):75-87 Cheng X, Byrne M, Brown KD, Konopleva MY, Kornblau SM, Bennett RL, May WS. 2015. PKR inhibits the DNA damage response, and is associated with poor survival in AML and accelerated leukemia in NHD13 mice. Blood. 126(13):1585-94. Dükel M, Streitfeld WS, Tang TC, Backman LR, Ai L, May WS, Brown KD. 2016. The Breast Cancer Tumor Suppressor TRIM29 is Expressed via ATM-Dependent Signaling in Response to Hypoxia. J Biol Chem. 291(41): 21541-52. Dyer LM, Ai L, Xu J, Kim WJ, Tang M, Reinhard MK, Backman LRF, Treiber N, Scharffetter-Kochanek K, Leeuwenburgh C, McKinnon PJ, and Brown KD. ATM is required for SOD2 Expression and Homeostasis within the Lactating Mammary Gland. Developmental Biology (in revision) Book Chapters Balczon, R.D., L. Bao, W.E. Zimmer, K.D. Brown, R.P. Zinkowski, and B.R. Brinkley. 1994. Analysis of centrosome replication events in mammalian cells. In : The Cell Cycle: Regulators, Targets, and Clinical Applications. V.W. Hu, ed. Plenum Press, New York. Brown, K.D. and D.A. Tagle. 1997. Molecular perspectives on cancer, the cell cycle and the inherited disorder ataxia-telangiectasia. In: Progress in Clinical and Biological Research Vol. 369: Etiology of Breast and Gynecological Cancers. C.M. Aldaz, M. N. Gould, J. McLachlan, T.J. Slaga, eds. Wylie-Liss, New York. Shivastav, M. and K.D. Brown. 2002. ATM and cancer risk. In : Recent Research Developments in Human Genetics. Research Signpost, Kerala, India. 1:63-81. Demircan B, and KD Brown. 2008. Cancer Epigenetics. In: Encyclopedia of Cancer. Ed: Manfred Schwab. Springer-Verlag, New York, NY. Orlando, FA, Dyer, LM, and KD Brown 2009. Chapter 12 - Epigenetic Analysis in Breast Cancer Progression. In: Epigenetics: Mechanisms, Functions and Human Effects. Eds: B. Pinter and Z. Meszaros. Nova Science Publishers Hauppauge, New York. Orlando, FA, Dyer, LM, and KD Brown. 2009. Chapter 13 - Cancer Epigenetics. In: Epigenetics: Mechanisms, Functions and Human Effects. Eds: B. Pinter and Z. Meszaros. Nova Science Publishers Hauppauge, New York.