SlideShare ist ein Scribd-Unternehmen logo
1 von 11
Downloaden Sie, um offline zu lesen
01
Juan David Ballut Rodriguez, Estudiante III semestre
Universidad Pontificia Bolivariana
30 de enero / 2023
INTRODUCTION
02
The Helicase-like Transcription Factor (HLTF) belongs to the SWI/SNF
family of proteins involved in chromatin remodeling. In addition to its
role in gene transcription, HLTF has been implicated in DNA repair,
which suggests that this protein acts as a tumor suppressor.
HELICASE-LIKE TRANSCRIPTION FACTOR (HLTF) AND IT´S
RELATION TO CARCINOGENESIS
HLTF has a low methylationrate in HCC.
Two transcript variants encoding the same protein have
been found for this gene.
DNA methylation
Chain of proteins in the cell that communicates a signal from a receptor on the
surface of the cell to the DNA in the nucleus of the cell. MAPK can activate a
transcription factor, such as Myc. This process is described in more detail below.
SRSF1 AND ERK/MAPK PATHWAY
SRSF1
SRSF1 is the gene that codes for ASF/SF2 (essential sequence
specific splicing factor)
03
To provide data of the underlying mechanism of HLTF in HCC progression for the first time.
OBJECTIVE
04
DNA sample
DNA Primers
Raw nucleotides
DNA polymerase
Technique used to amplify
specific segments of DNA
You need:
METHODS
05
Tissues or cells were lysed with RIPA buffer supplemented with protease and
phosphatase inhibitors, and proteins were harvested. Then, the proteins were
separated on PAGE gels and electrotransferred onto NC membranes.
REAL-TIME QUANTITATIVE PCR (QRT‒
PCR)
Total RNA was extracted using
an RNA Miniprep Kit
WESTERN BLOTTING
The expression levels of
mRNAs and miRNAs were
normalized to those of GAPDH
and U6
06
RNA extraction
Reverse transcription into cDNA
Adapted ligation
Amplification
Sequencing
RNA sequencing was completed by JLX MEDICAL SCIENCES (Shanghai, China).
Briefly, Huh7 cells transfected with shHLTF-1 or shNC were used to extract total
RNA for quality control.
UBIQUITINATION ASSAY
This pathway targets proteins to
the proteasome, which degrades
and recycles the substrates.
E1 Ub-activating enzyme
E2 Ub-conjugating enzyme
E3 Ub ligase
METHODS
RNA SEQUENCING
Key enzymes:
RESULTS
07
RESULTS
08
AUTHOR
Ariel Shimoni-
Sebag
Yuji
Masuda
Wenjing
Yong
TAKEAWAYS
"It has been confirmed that SRSF1 may
promote the activation of the ERK/MAPK
signaling pathway by increasing the levels
of B-RAF mRNA and protein".
The stability of SRSF1 protein was significantly reduced in
HLTF knockdown HCC cells, but the ubiquitination of SRSF1
was enhanced in the presence of MG132, while the result was
the opposite in HLTF-overexpressing cells. HLTF has been
reported to act as an E3 ubiquitin ligase to promote the
polyubiquitination of PCNA by forming a thioesterlinked Ub
chain, thus participating in postreplication DNA repair.
In our study, we found by a luciferase reporter assay
that miR-511-5p, as the upstream regulator of HLTF,
directly targets HLTF. It has been reported that miR-
511-5p expression is markedly reduced in gastric
and colorectal cancer and functions as a tumor
suppressor.
IN AGREEMENT DISAGREEMENT
DISCUSSION
09
CONCLUSSIONS
10
Inhibitors of the Mapk pathway and
HLTF such as miR-511-5p can be utilized
as a form of treatment not cure of hcc
patients.
MAPK pathways as a cellular proliferation
factor while studying it, helps us to find
out which genes and environmental
factors have a critical role during the
development of cancer, so there would be
the possibility of finding those causes
and possible treatments for diseases that
were initially considered untreatable.
MAP
11

Weitere ähnliche Inhalte

Ähnlich wie HLTF promotes hepatocellular carcinoma progression Juan David Ballut 000483796.pdf

Molecular mechanisms final
Molecular mechanisms finalMolecular mechanisms final
Molecular mechanisms final
mosaiques
 
Genetic Dna And Bioinformatics ( Accession No. Xp Essay
Genetic Dna And Bioinformatics ( Accession No. Xp EssayGenetic Dna And Bioinformatics ( Accession No. Xp Essay
Genetic Dna And Bioinformatics ( Accession No. Xp Essay
Jessica Deakin
 
Receptors with intrinsic protein kinase activity
Receptors with intrinsic protein kinase activityReceptors with intrinsic protein kinase activity
Receptors with intrinsic protein kinase activity
Dr.M.Prasad Naidu
 
Human, Eukaryotic And Vitro Associations Of Murine Sec...
Human, Eukaryotic And Vitro Associations Of Murine Sec...Human, Eukaryotic And Vitro Associations Of Murine Sec...
Human, Eukaryotic And Vitro Associations Of Murine Sec...
Rachel Davis
 
1-s2.0-S0167488911000772-main
1-s2.0-S0167488911000772-main1-s2.0-S0167488911000772-main
1-s2.0-S0167488911000772-main
Andreas D. Song
 
Eukaryotic Gene Regulation: Detailed Review
Eukaryotic Gene Regulation: Detailed Review Eukaryotic Gene Regulation: Detailed Review
Eukaryotic Gene Regulation: Detailed Review
Zohaib HUSSAIN
 

Ähnlich wie HLTF promotes hepatocellular carcinoma progression Juan David Ballut 000483796.pdf (20)

Poster
PosterPoster
Poster
 
GENE REGULATION.pptx
GENE REGULATION.pptxGENE REGULATION.pptx
GENE REGULATION.pptx
 
Epidermal growth factor and its receptor tyrosine kinase
Epidermal growth factor and its receptor tyrosine kinaseEpidermal growth factor and its receptor tyrosine kinase
Epidermal growth factor and its receptor tyrosine kinase
 
Regulation of Gene expression
Regulation of Gene expression Regulation of Gene expression
Regulation of Gene expression
 
Teloomerase Research Paper
Teloomerase Research PaperTeloomerase Research Paper
Teloomerase Research Paper
 
Carbon monoxide
Carbon monoxideCarbon monoxide
Carbon monoxide
 
notch signaling and acute leukemia
notch signaling and acute leukemianotch signaling and acute leukemia
notch signaling and acute leukemia
 
Galactose operon and Histidine operon
Galactose operon  and Histidine operon  Galactose operon  and Histidine operon
Galactose operon and Histidine operon
 
Cancer genes
Cancer genesCancer genes
Cancer genes
 
OSU-03012 sensitizes breast cancers to lapatinib-induced cell killing: a role...
OSU-03012 sensitizes breast cancers to lapatinib-induced cell killing: a role...OSU-03012 sensitizes breast cancers to lapatinib-induced cell killing: a role...
OSU-03012 sensitizes breast cancers to lapatinib-induced cell killing: a role...
 
Molecular mechanisms final
Molecular mechanisms finalMolecular mechanisms final
Molecular mechanisms final
 
Seminario biomol
Seminario biomolSeminario biomol
Seminario biomol
 
Regulation by Wnt Signaling
Regulation by Wnt SignalingRegulation by Wnt Signaling
Regulation by Wnt Signaling
 
Linking t rna localization with activation
Linking t rna localization with activationLinking t rna localization with activation
Linking t rna localization with activation
 
Genetic Dna And Bioinformatics ( Accession No. Xp Essay
Genetic Dna And Bioinformatics ( Accession No. Xp EssayGenetic Dna And Bioinformatics ( Accession No. Xp Essay
Genetic Dna And Bioinformatics ( Accession No. Xp Essay
 
Receptors with intrinsic protein kinase activity
Receptors with intrinsic protein kinase activityReceptors with intrinsic protein kinase activity
Receptors with intrinsic protein kinase activity
 
Human, Eukaryotic And Vitro Associations Of Murine Sec...
Human, Eukaryotic And Vitro Associations Of Murine Sec...Human, Eukaryotic And Vitro Associations Of Murine Sec...
Human, Eukaryotic And Vitro Associations Of Murine Sec...
 
1-s2.0-S0167488911000772-main
1-s2.0-S0167488911000772-main1-s2.0-S0167488911000772-main
1-s2.0-S0167488911000772-main
 
Eukaryotic Gene Regulation: Detailed Review
Eukaryotic Gene Regulation: Detailed Review Eukaryotic Gene Regulation: Detailed Review
Eukaryotic Gene Regulation: Detailed Review
 
Histidine operon
Histidine operonHistidine operon
Histidine operon
 

Kürzlich hochgeladen

Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
ZurliaSoop
 
The basics of sentences session 3pptx.pptx
The basics of sentences session 3pptx.pptxThe basics of sentences session 3pptx.pptx
The basics of sentences session 3pptx.pptx
heathfieldcps1
 
Spellings Wk 3 English CAPS CARES Please Practise
Spellings Wk 3 English CAPS CARES Please PractiseSpellings Wk 3 English CAPS CARES Please Practise
Spellings Wk 3 English CAPS CARES Please Practise
AnaAcapella
 
Salient Features of India constitution especially power and functions
Salient Features of India constitution especially power and functionsSalient Features of India constitution especially power and functions
Salient Features of India constitution especially power and functions
KarakKing
 
Vishram Singh - Textbook of Anatomy Upper Limb and Thorax.. Volume 1 (1).pdf
Vishram Singh - Textbook of Anatomy  Upper Limb and Thorax.. Volume 1 (1).pdfVishram Singh - Textbook of Anatomy  Upper Limb and Thorax.. Volume 1 (1).pdf
Vishram Singh - Textbook of Anatomy Upper Limb and Thorax.. Volume 1 (1).pdf
ssuserdda66b
 

Kürzlich hochgeladen (20)

General Principles of Intellectual Property: Concepts of Intellectual Proper...
General Principles of Intellectual Property: Concepts of Intellectual  Proper...General Principles of Intellectual Property: Concepts of Intellectual  Proper...
General Principles of Intellectual Property: Concepts of Intellectual Proper...
 
How to Manage Global Discount in Odoo 17 POS
How to Manage Global Discount in Odoo 17 POSHow to Manage Global Discount in Odoo 17 POS
How to Manage Global Discount in Odoo 17 POS
 
Kodo Millet PPT made by Ghanshyam bairwa college of Agriculture kumher bhara...
Kodo Millet  PPT made by Ghanshyam bairwa college of Agriculture kumher bhara...Kodo Millet  PPT made by Ghanshyam bairwa college of Agriculture kumher bhara...
Kodo Millet PPT made by Ghanshyam bairwa college of Agriculture kumher bhara...
 
Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
 
Dyslexia AI Workshop for Slideshare.pptx
Dyslexia AI Workshop for Slideshare.pptxDyslexia AI Workshop for Slideshare.pptx
Dyslexia AI Workshop for Slideshare.pptx
 
Food safety_Challenges food safety laboratories_.pdf
Food safety_Challenges food safety laboratories_.pdfFood safety_Challenges food safety laboratories_.pdf
Food safety_Challenges food safety laboratories_.pdf
 
Google Gemini An AI Revolution in Education.pptx
Google Gemini An AI Revolution in Education.pptxGoogle Gemini An AI Revolution in Education.pptx
Google Gemini An AI Revolution in Education.pptx
 
FSB Advising Checklist - Orientation 2024
FSB Advising Checklist - Orientation 2024FSB Advising Checklist - Orientation 2024
FSB Advising Checklist - Orientation 2024
 
Key note speaker Neum_Admir Softic_ENG.pdf
Key note speaker Neum_Admir Softic_ENG.pdfKey note speaker Neum_Admir Softic_ENG.pdf
Key note speaker Neum_Admir Softic_ENG.pdf
 
TỔNG ÔN TẬP THI VÀO LỚP 10 MÔN TIẾNG ANH NĂM HỌC 2023 - 2024 CÓ ĐÁP ÁN (NGỮ Â...
TỔNG ÔN TẬP THI VÀO LỚP 10 MÔN TIẾNG ANH NĂM HỌC 2023 - 2024 CÓ ĐÁP ÁN (NGỮ Â...TỔNG ÔN TẬP THI VÀO LỚP 10 MÔN TIẾNG ANH NĂM HỌC 2023 - 2024 CÓ ĐÁP ÁN (NGỮ Â...
TỔNG ÔN TẬP THI VÀO LỚP 10 MÔN TIẾNG ANH NĂM HỌC 2023 - 2024 CÓ ĐÁP ÁN (NGỮ Â...
 
The basics of sentences session 3pptx.pptx
The basics of sentences session 3pptx.pptxThe basics of sentences session 3pptx.pptx
The basics of sentences session 3pptx.pptx
 
Spellings Wk 3 English CAPS CARES Please Practise
Spellings Wk 3 English CAPS CARES Please PractiseSpellings Wk 3 English CAPS CARES Please Practise
Spellings Wk 3 English CAPS CARES Please Practise
 
SOC 101 Demonstration of Learning Presentation
SOC 101 Demonstration of Learning PresentationSOC 101 Demonstration of Learning Presentation
SOC 101 Demonstration of Learning Presentation
 
Unit-IV- Pharma. Marketing Channels.pptx
Unit-IV- Pharma. Marketing Channels.pptxUnit-IV- Pharma. Marketing Channels.pptx
Unit-IV- Pharma. Marketing Channels.pptx
 
Single or Multiple melodic lines structure
Single or Multiple melodic lines structureSingle or Multiple melodic lines structure
Single or Multiple melodic lines structure
 
Salient Features of India constitution especially power and functions
Salient Features of India constitution especially power and functionsSalient Features of India constitution especially power and functions
Salient Features of India constitution especially power and functions
 
Understanding Accommodations and Modifications
Understanding  Accommodations and ModificationsUnderstanding  Accommodations and Modifications
Understanding Accommodations and Modifications
 
Fostering Friendships - Enhancing Social Bonds in the Classroom
Fostering Friendships - Enhancing Social Bonds  in the ClassroomFostering Friendships - Enhancing Social Bonds  in the Classroom
Fostering Friendships - Enhancing Social Bonds in the Classroom
 
Vishram Singh - Textbook of Anatomy Upper Limb and Thorax.. Volume 1 (1).pdf
Vishram Singh - Textbook of Anatomy  Upper Limb and Thorax.. Volume 1 (1).pdfVishram Singh - Textbook of Anatomy  Upper Limb and Thorax.. Volume 1 (1).pdf
Vishram Singh - Textbook of Anatomy Upper Limb and Thorax.. Volume 1 (1).pdf
 
HMCS Max Bernays Pre-Deployment Brief (May 2024).pptx
HMCS Max Bernays Pre-Deployment Brief (May 2024).pptxHMCS Max Bernays Pre-Deployment Brief (May 2024).pptx
HMCS Max Bernays Pre-Deployment Brief (May 2024).pptx
 

HLTF promotes hepatocellular carcinoma progression Juan David Ballut 000483796.pdf

  • 1. 01 Juan David Ballut Rodriguez, Estudiante III semestre Universidad Pontificia Bolivariana 30 de enero / 2023
  • 2. INTRODUCTION 02 The Helicase-like Transcription Factor (HLTF) belongs to the SWI/SNF family of proteins involved in chromatin remodeling. In addition to its role in gene transcription, HLTF has been implicated in DNA repair, which suggests that this protein acts as a tumor suppressor. HELICASE-LIKE TRANSCRIPTION FACTOR (HLTF) AND IT´S RELATION TO CARCINOGENESIS HLTF has a low methylationrate in HCC. Two transcript variants encoding the same protein have been found for this gene. DNA methylation
  • 3. Chain of proteins in the cell that communicates a signal from a receptor on the surface of the cell to the DNA in the nucleus of the cell. MAPK can activate a transcription factor, such as Myc. This process is described in more detail below. SRSF1 AND ERK/MAPK PATHWAY SRSF1 SRSF1 is the gene that codes for ASF/SF2 (essential sequence specific splicing factor) 03
  • 4. To provide data of the underlying mechanism of HLTF in HCC progression for the first time. OBJECTIVE 04
  • 5. DNA sample DNA Primers Raw nucleotides DNA polymerase Technique used to amplify specific segments of DNA You need: METHODS 05 Tissues or cells were lysed with RIPA buffer supplemented with protease and phosphatase inhibitors, and proteins were harvested. Then, the proteins were separated on PAGE gels and electrotransferred onto NC membranes. REAL-TIME QUANTITATIVE PCR (QRT‒ PCR) Total RNA was extracted using an RNA Miniprep Kit WESTERN BLOTTING The expression levels of mRNAs and miRNAs were normalized to those of GAPDH and U6
  • 6. 06 RNA extraction Reverse transcription into cDNA Adapted ligation Amplification Sequencing RNA sequencing was completed by JLX MEDICAL SCIENCES (Shanghai, China). Briefly, Huh7 cells transfected with shHLTF-1 or shNC were used to extract total RNA for quality control. UBIQUITINATION ASSAY This pathway targets proteins to the proteasome, which degrades and recycles the substrates. E1 Ub-activating enzyme E2 Ub-conjugating enzyme E3 Ub ligase METHODS RNA SEQUENCING Key enzymes:
  • 9. AUTHOR Ariel Shimoni- Sebag Yuji Masuda Wenjing Yong TAKEAWAYS "It has been confirmed that SRSF1 may promote the activation of the ERK/MAPK signaling pathway by increasing the levels of B-RAF mRNA and protein". The stability of SRSF1 protein was significantly reduced in HLTF knockdown HCC cells, but the ubiquitination of SRSF1 was enhanced in the presence of MG132, while the result was the opposite in HLTF-overexpressing cells. HLTF has been reported to act as an E3 ubiquitin ligase to promote the polyubiquitination of PCNA by forming a thioesterlinked Ub chain, thus participating in postreplication DNA repair. In our study, we found by a luciferase reporter assay that miR-511-5p, as the upstream regulator of HLTF, directly targets HLTF. It has been reported that miR- 511-5p expression is markedly reduced in gastric and colorectal cancer and functions as a tumor suppressor. IN AGREEMENT DISAGREEMENT DISCUSSION 09
  • 10. CONCLUSSIONS 10 Inhibitors of the Mapk pathway and HLTF such as miR-511-5p can be utilized as a form of treatment not cure of hcc patients. MAPK pathways as a cellular proliferation factor while studying it, helps us to find out which genes and environmental factors have a critical role during the development of cancer, so there would be the possibility of finding those causes and possible treatments for diseases that were initially considered untreatable.