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 Personalised	
  and	
  Par,cipatory	
  
                     Medicine	
  
                                          	
  
                         Workshop,	
  15	
  May	
  2012	
  

                                        	
  
                   Fernando	
  Mar*n-­‐Sanchez	
  
           Ins$tute	
  for	
  a	
  Broadband-­‐Enabled	
  Society	
  
                 &	
  Melbourne	
  Medical	
  School	
  
	
  
Introduc$on	
  
•  Broadband	
  can	
  provide	
  many	
  
   opportuni$es	
  for	
  the	
  health	
  sector:	
  
    –  Improving	
  youth	
  mental	
  health	
  and	
  aged	
  
       care	
  services	
  
    –  Monitoring	
  health	
  condi$ons	
  	
  	
  
    –  Enabling	
  shared	
  electronic	
  health	
  records	
  
    –  Telehealth	
  	
  


•  Convergence	
  with	
  other	
  technologies	
  
   towards	
  Digitally	
  Enabled	
  Personalized	
  
   and	
  Par$cipatory	
  Medicine	
  
Aging	
  Well  	
  
–  Mobile	
  and	
  broadband	
   	
  
   technologies	
  for	
  ameliora,ng	
  
   social	
  isola,on	
  in	
  older	
  people	
  
–  Smart	
  Homes	
  for	
  the	
  Elderly	
  –	
  
   recent	
  developments	
  in	
  Korea	
  

                Youth	
  Mental	
  Health	
  	
  	
  
−  HORYZONS:	
  Online	
  
   Recovery	
  for	
  Youth	
  Onset	
  
   Psychosis	
  
Telehealth	
  
–    Individual	
  Electronic	
  Health	
  Records	
   	
  
–    The	
  Telestroke	
  Study	
  
–    Hap*c	
  Tele-­‐Rehabilita/on	
  	
  
–    Teleden/stry	
  	
  	
  
–    Virtual	
  visits:	
  Inves*ga*ng	
  the	
  acceptability	
  of	
  webcam	
  consulta*ons	
  for	
  young	
  
     adults’	
  sexual	
  health	
  
–    Wireless	
  broadband	
  monitoring	
  of	
  knee	
  osteoarthri/s	
  
–    Overcoming	
  geographical	
  barriers	
  for	
  community	
  health	
  
–    Interpreter	
  mediated	
  cogni*ve	
  assessments	
  using	
  video	
  conferencing	
  soFware	
  
–    SeeCare	
  IPTV:	
  Personalised	
  Health	
  Literacy	
  Demonstrator	
  
–    Mobile	
  Augmented	
  Reality	
  
–    Interpreter	
  mediated	
  cogni/ve	
  assessments	
  using	
  video	
  conferencing	
  soFware	
  	
  
–    High	
  resolu*on	
  monitoring	
  of	
  atmospheric	
  pollutants	
  to	
  iden*fy	
  their	
  impact	
  on	
  
     popula*on	
  health	
  
–    Overcoming	
  geographical	
  barriers	
  for	
  community	
  health	
  
–    Using	
  video-­‐conferencing	
  to	
  pilot	
  an	
  educa*on	
  and	
  clinical	
  support	
  package	
  for	
  
     rural	
  GPs	
  in	
  Mildura	
  
Current	
  challenges	
  in	
  Medicine	
  
•  Need	
  of	
  earlier	
  diagnosis	
  	
  	
  
•  More	
  personalized	
  therapies	
  
•  Clinical	
  trials	
  and	
  the	
  development	
  of	
  new	
  
   drugs	
  need	
  to	
  be	
  faster	
  and	
  more	
  effec$ve	
  
•  Improve	
  disease	
  classifica$on	
  systems	
  	
  	
  
•  Risk	
  profiling,	
  disease	
  predic$on	
  and	
  
   preven$on	
  	
  	
  
•  Control	
  health	
  system	
  costs	
  	
  
•  Ci$zens	
  should	
  take	
  more	
  responsibility	
  for	
  
   the	
  maintenance	
  of	
  their	
  own	
  health.	
  
The Digitalization of Medicine
•  Digital	
  revolu$on	
  in	
  other	
  domains	
  (banking,	
  insurance,	
  
   leisure,	
  government,…)	
  
•  The	
  incorpora$on	
  of	
  digital	
  systems	
  in	
  healthcare	
  is	
  lagging	
  
   behind	
  other	
  sectors:	
  
    –  Reasons:	
  complexity,	
  privacy,	
  volume	
  of	
  data,	
  lack	
  of	
  
       demand	
  
    –  It	
  has	
  greatly	
  affected	
  healthcare	
  at	
  the	
  hospital	
  or	
  
       research	
  centre	
  level.	
  	
  
    –  The	
  digital	
  revolu$on	
  has	
  not	
  yet	
  reached	
  medicine,	
  at	
  
       the	
  pa$ent/ci$zen	
  level	
  	
  
         • BUT	
  THIS	
  IS	
  STARTING	
  TO	
  HAPPEN	
  NOW	
  !!!	
  
Vision
•  The	
  convergence	
  of	
  medicine	
  and	
  the	
  digital	
  revolu$on	
  
     will	
  produce	
  an	
  informa,on	
  ecosystem	
  that	
  will	
  facilitate	
  
     the	
  advent	
  of	
  safer	
  and	
  more	
  efficient	
  preven$ve,	
  
     diagnos$c	
  and	
  therapeu$c	
  solu$ons.	
  	
  
	
  
•  The	
  ci$zen	
  will	
  have	
  access	
  to	
  her	
  gene,c	
  profile	
  and	
  
     clinical	
  record,	
  and	
  will	
  monitor	
  and	
  adjust	
  her	
  health	
  
     using	
  next	
  genera$on	
  sensors	
  and	
  social	
  networks	
  to	
  
     share	
  this	
  informa$on	
  with	
  peers,	
  clinicians	
  and	
  
     researchers.	
  	
  	
  
High-­‐capacity	
  Broadband	
  technologies	
  and	
  networks
                                                                    	
  
•  The	
  availability	
  of	
  ultra-­‐high-­‐speed,	
  high-­‐capacity,	
  
     ubiquitous,	
  ‘always-­‐on’	
  broadband	
  connec$vity	
  will	
  
     contribute	
  to	
  the	
  development	
  of	
  an	
  integrated	
  
     digital	
  infrastructure	
  for	
  medicine,	
  reaching	
  the	
  
     ci,zen,	
  that	
  will	
  make	
  feasible	
  the	
  concepts	
  of	
  
     personalized	
  medicine	
  and	
  par$cipatory	
  health.	
  
	
  
•  Ultra	
  high	
  speed	
  broadband	
  networks	
  will	
  be	
  
     required	
  to	
  transmit	
  enormous	
  volumes	
  of	
  data	
  
     from	
  pa$ents’	
  homes	
  to	
  health	
  prac$$oners	
  and	
  
     vice	
  versa	
  in	
  a	
  $mely	
  manner,	
  and	
  to	
  enable	
  the	
  
     processing	
  of	
  this	
  deluge	
  of	
  data.	
  
Collecting genome data


•  Benchtop	
  Ion	
  Proton™	
  
   Sequencer	
  –	
  designed	
  to	
  
   sequence	
  the	
  en$re	
  human	
  
   genome	
  in	
  a	
  day	
  for	
  $1,000	
  
Collec$ng	
  phenome	
  data	
  
Collec$ng	
  exposome	
  data	
  
•  Compilation of exposures experienced over an individual
   lifetime (Christopher Wild, 2005)

•  OUTSIDE / INSIDE – Absorbed -- Industrial chemicals,
   combustion emissions, radiation, response to stress,
   physical activity levels – heat/cold, noise, food,
   microbiome

•  Evaluating Personal Exposures
     •  Phones: Light meters, GPS, Accelerometer
     •  Senspod Monitor (Ozone, carbon monoxide, CO2, NO,
        Noise and UV)
     •  Arizona State University – Petroleum derived
        hydrocarbons (Benzene, Toluene)
Remote	
  pa$ent	
  data	
  monitoring	
  and	
  data	
  collec$on	
  
  Environmental sensors                                                            Genomic sensors




                                           Phenomic sensors




Environmental risk factors                                               Biomarkers (DNA sequence,
(pollution, radiation, toxic agents, …)                                  proteins, gene expression, epigenetics


                                Physiological, biochemical parameters
                                (cholesterol, temperature, glucose, heart rate…)



                                     Integrated personal health record
Na$onal	
  Broadband	
  Network	
  
Patient Data (sensors and imaging)
                                                                                  Sensors
                       Genomic    Phenomic           Environmental


                                 Integrated Personal
              EHR                Health Record


                 Module 1         Health Profile                                          GWAS
                                  Assessment
                                                           Tables (weighted factors)
            Modelling                Risks

                                     Diagnosis       Personal
                                                     Health Profile
                                                                                          CDSS

                                  Health Profile
                 Module 2         Improvement                                          Trialbanks
Networks

                                    Risk reduction           Decision matrix, protocols
           Follow-up                                 Personalised
                                    Therapy          Health Recommendations
Personalized	
  
  medicine	
  
Defini$on	
  
•  Personalized	
  medicine	
  uses	
  an	
  
   individual's	
  gene*c	
  (and	
  molecular)	
  
   profile	
  and	
  individual	
  informa*on	
  
   about	
  environmental	
  exposures	
  to	
  
   guide	
  decisions	
  made	
  in	
  regard	
  to	
  (risk	
  
   profiling)	
  and	
  the	
  preven*on,	
  
   diagnosis,	
  and	
  treatment	
  of	
  disease.	
  	
  

                         (Adapted	
  from	
  F.	
  Collins,	
  Director	
  NIH)
                                                                              	
  
Clinical	
  applica$ons	
  of	
  genomic	
  informa$on	
  

•  Pharmacogene$cs	
  –	
  Personalized	
  
   Medicine	
  Coali$on	
  	
  -­‐	
  72	
  drugs	
  in	
  
   2011	
  
•  Cys$c	
  fibrosis	
  –	
  successful	
  clinical	
  
   trial	
  for	
  a	
  specific	
  muta$on	
  
•  Iden$fica$on	
  of	
  metabolic	
  
   diseases	
  
Personal Genomics
Self-­‐genomics	
  -­‐	
  Clinical	
  annota$on	
  of	
  
                 individual	
  genomes	
  	
  
  •  Prof.	
  Quake	
  -­‐	
  Stanford	
  -­‐	
  	
  -­‐	
  Nature	
  gene$cs	
  
     paper	
  -­‐	
  $50.000,	
  1	
  week,	
  Helicos.	
  Stanford	
  
     team	
  -­‐	
  	
  
  •  Clinical annotation of genome from
     “patient Zero”
      –  Drug	
  metabolism	
  
      –  Rare	
  gene$c	
  variants	
  -­‐	
  rare	
  diseases	
  
      –  Common	
  gene$c	
  variants	
  -­‐	
  Risk	
  of	
  
         complex	
  diseases	
  


Ashley et al. The Lancet, Volume 375, Issue 9725, Pages 1525 - 1535, 1 May 2010
First	
  personal	
  	
  longitudinal	
  OMICS	
  profiling	
  exercise	
  

•    Combined	
  analysis	
  of	
  genomic,	
  transcriptomic,	
  proteomic,	
  
     metabolomic	
  and	
  immunological	
  profiles	
  from	
  a	
  single	
  
     individual	
  (one	
  of	
  the	
  authors-­‐	
  	
  Prof.	
  Michael	
  Snyder),	
  over	
  a	
  
     14	
  month	
  period.	
  More	
  than	
  3	
  billion	
  measurements.	
  	
  
•    He	
  contracted	
  two	
  mild	
  viral	
  infec$ons	
  in	
  the	
  data-­‐gathering	
  
     period,	
  which	
  lem	
  their	
  molecular	
  signature	
  in	
  the	
  analyses.	
  
•    During	
  one	
  of	
  these	
  infec$ons,	
  his	
  blood	
  glucose	
  levels	
  began	
  
     to	
  approach	
  those	
  of	
  a	
  diabetes	
  sufferer.	
  Amer	
  changing	
  his	
  
     diet	
  and	
  exercise	
  habits,	
  glucose	
  level	
  returned	
  to	
  normal.	
  
•    This	
  study	
  shows	
  that	
  diseases	
  are	
  a	
  product	
  of	
  an	
  individual’s	
  
     gene$c	
  profile	
  as	
  well	
  as	
  interac$on	
  with	
  the	
  environment	
  and	
  
     that	
  disease	
  can	
  be	
  treated	
  based	
  on	
  molecular	
  informa$on.	
  
                                                                                                                     	
  
                                      (Chen	
  et	
  al,	
  Cell	
  148,	
  1293-­‐1307	
  March	
  16	
  2012	
  )
                                                                                                                  	
  
Par$cipatory	
  
   Health	
  
Par$cipatory	
  Health	
  
• 

•  From Web 1.0 – Use of internet to find health information to Web 2.0 –
   web-based communities and services. NHS Social Care Model (NHS)

•  A survey of 1,060 U.S. adults by the PwC Health Research Institute found
   that a third of respondents are gravitating toward social media as a place
   for discussions of health care.

•  Pew Internet study – 27% of US internet users had tracked health data
   online

•  Care management, disease management, supported self-care, promoting
   better health à Patients empowered, informed and involved in decision
   making, prevention and learning
Par$cipatory	
  Health	
  
                  self tracking devices
Social web
                                            games
                   Participatory Health
     mobile                               Internet of things
                sensors           PCEHR
PCEHR	
  
                               	
  
•  Quality = patients reviewing their own records - Shared
   Medical Records

•  MyHealth@Vanderbilt – information on prescriptions is
   shared. Knowledge management team – consumers will have
   convenient e-access to their medical records and genetic
   profiles to social media & games

•  Facebook
    • Lifeline – support line for suicide
    • Organ donor status
    • Blood type – app will contact the user
DIY	
  EHR-­‐	
  The	
  Cathedral	
  and	
  the	
  
                    Bazaar   	
  
Social	
  media	
  as	
  a	
  research	
  tool
                                                                               	
  

•  We	
  are	
  witnessing	
  a	
  transi$on	
  from	
  research	
  informa$on	
  systems	
  
   centralized	
  at	
  hospitals	
  and	
  clinical	
  research	
  centres	
  to	
  distributed	
  systems	
  
   that	
  reach	
  out	
  to	
  the	
  residence	
  of	
  any	
  ci$zen	
  /	
  pa$ent	
  who	
  opts	
  in.	
  	
  
•  Clinical	
  Research	
  with	
  the	
  pa$ents,	
  not	
  on	
  the	
  pa$ents	
  
•  Examples	
  
    –  23andMe	
  –	
  Parkinson’s	
  Disease	
  –	
  PLoS	
  Gene$cs,	
  2	
  new	
  gene$c	
  
        associa$ons	
  
    –  Pa$entsLikeMe	
  –	
  Nature	
  Biotech.	
  Self-­‐reported	
  data	
  from	
  600	
  pa$ents	
  
        on	
  the	
  use	
  of	
  lithium	
  for	
  Amyotrophic	
  Lateral	
  Sclerosis	
  (ALS)	
  
Crowdsourced	
  clinical	
  trials
                                      	
  
•  DIY science, Crowdsourced Health Research Studies,
   Citizen science, Amateur Scientist, Self-
   Experimentation

•  Patients Like Me – 125.000 members. 1000 condition-
   based communities –25 Papers published in PNAS, Nat
   Biotech, JMIR, …

•  23andme – 23 and we –
•  Acor, RevolutionHealth, Curetogether, Genomera,
   Althea Health
•      Self	
  tracking	
  /	
  self	
  quan$fying	
  /	
  self	
  monitoring	
  
•      The	
  belief	
  that	
  gathering	
  and	
  analysing	
  data	
  can	
  help	
  them	
  improve	
  
       their	
  lives!	
  
•      QS’ers	
  	
  doubling	
  every	
  year.–	
  5524	
  members,	
  42	
  meetup	
  groups	
  
•      Larry	
  Smarr–	
  10years	
  quan$fying	
  his	
  body	
  
        –  Weight	
  –	
  physical	
  ac$vity:	
  calories	
  burnt	
  (body	
  media)	
  –	
  Food	
  
                intake	
  –	
  Sleep	
  (Zeo)	
  –	
  blood	
  chemicals	
  (60	
  Markers)	
  –	
  
                cholesterol/triglycerides	
  /	
  Apo	
  B	
  /	
  Ω	
  –	
  6,	
  Ω	
  –	
  3/	
  C-­‐reac$ve	
  protein	
  
                -­‐	
  Ultrasound	
  –	
  (plaque	
  in	
  arteries)	
  –	
  stool	
  test	
  –	
  colonoscopy	
  –	
  
                DNA	
  –	
  Microbiome	
  
	
  
•      Fitbit	
  –	
  Sleep	
  –	
  Movement	
  
•      +9000	
  health	
  apps,	
  each	
  person	
  connected	
  to	
  140	
  devices,	
  9	
  billion	
  of	
  
       connected	
  devices	
  now,	
  24	
  billion	
  by	
  2020	
  

•      NODE	
  Sensor	
  Environment	
  	
  	
  
Pa$ent	
  empowerment
                                      	
  
Current           NBN-enabled       Driving forces: patient empowerment,
networks                            personalized medicine, social networks
EHR –             Personally        Citizens are able to maintain and control
Electronic        Controlled EHR    their own health information
Health Record
Gene-disease      Personal          Citizens ask for genetic analysis of their
association       genomics          DNA through the Internet and receive
studies                             reports on various aspects of their health



Clinical trials   Crowdsourced      The patient voluntarily shares information
                  clinical trials   on treatments and evolution of his/her
                                    illness with other patients
Barriers
•  New	
  regulatory	
  framework	
  (new	
  models	
  of	
  clinical	
  
   trials)	
  
•  New	
  informa$cs	
  methods	
  to	
  compile	
  and	
  interpret	
  all	
  
   the	
  informa$on	
  
•  Educa$on	
  of	
  pa$ents	
  and	
  health	
  professionals	
  
•  Ethics,	
  data	
  security	
  and	
  confiden$ality	
  issues	
  
•  Wide	
  availability	
  of	
  clinical	
  decision	
  support	
  systems	
  at	
  
   the	
  point-­‐of-­‐care	
  
•  New	
  cost-­‐effec$veness	
  assessment	
  and	
  financial	
  
   models	
  of	
  care	
  
•  Need	
  to	
  prove	
  clinical	
  effec$veness	
  before	
  DTC	
  services	
  
   are	
  offered.	
  
Thank	
  you	
  	
  
           	
  
                      sms@unimelb.edu.au	
  
       www.healthinforma$cs.unimelb.edu.au	
  
                         Twiuer:	
  @ibeshbir	
  
	
  

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Personalised and Participatory Medicine Workshop15 may 2012

  • 1.  Personalised  and  Par,cipatory   Medicine     Workshop,  15  May  2012     Fernando  Mar*n-­‐Sanchez   Ins$tute  for  a  Broadband-­‐Enabled  Society   &  Melbourne  Medical  School    
  • 2. Introduc$on   •  Broadband  can  provide  many   opportuni$es  for  the  health  sector:   –  Improving  youth  mental  health  and  aged   care  services   –  Monitoring  health  condi$ons       –  Enabling  shared  electronic  health  records   –  Telehealth     •  Convergence  with  other  technologies   towards  Digitally  Enabled  Personalized   and  Par$cipatory  Medicine  
  • 3. Aging  Well   –  Mobile  and  broadband     technologies  for  ameliora,ng   social  isola,on  in  older  people   –  Smart  Homes  for  the  Elderly  –   recent  developments  in  Korea   Youth  Mental  Health       −  HORYZONS:  Online   Recovery  for  Youth  Onset   Psychosis  
  • 4. Telehealth   –  Individual  Electronic  Health  Records     –  The  Telestroke  Study   –  Hap*c  Tele-­‐Rehabilita/on     –  Teleden/stry       –  Virtual  visits:  Inves*ga*ng  the  acceptability  of  webcam  consulta*ons  for  young   adults’  sexual  health   –  Wireless  broadband  monitoring  of  knee  osteoarthri/s   –  Overcoming  geographical  barriers  for  community  health   –  Interpreter  mediated  cogni*ve  assessments  using  video  conferencing  soFware   –  SeeCare  IPTV:  Personalised  Health  Literacy  Demonstrator   –  Mobile  Augmented  Reality   –  Interpreter  mediated  cogni/ve  assessments  using  video  conferencing  soFware     –  High  resolu*on  monitoring  of  atmospheric  pollutants  to  iden*fy  their  impact  on   popula*on  health   –  Overcoming  geographical  barriers  for  community  health   –  Using  video-­‐conferencing  to  pilot  an  educa*on  and  clinical  support  package  for   rural  GPs  in  Mildura  
  • 5. Current  challenges  in  Medicine   •  Need  of  earlier  diagnosis       •  More  personalized  therapies   •  Clinical  trials  and  the  development  of  new   drugs  need  to  be  faster  and  more  effec$ve   •  Improve  disease  classifica$on  systems       •  Risk  profiling,  disease  predic$on  and   preven$on       •  Control  health  system  costs     •  Ci$zens  should  take  more  responsibility  for   the  maintenance  of  their  own  health.  
  • 6. The Digitalization of Medicine •  Digital  revolu$on  in  other  domains  (banking,  insurance,   leisure,  government,…)   •  The  incorpora$on  of  digital  systems  in  healthcare  is  lagging   behind  other  sectors:   –  Reasons:  complexity,  privacy,  volume  of  data,  lack  of   demand   –  It  has  greatly  affected  healthcare  at  the  hospital  or   research  centre  level.     –  The  digital  revolu$on  has  not  yet  reached  medicine,  at   the  pa$ent/ci$zen  level     • BUT  THIS  IS  STARTING  TO  HAPPEN  NOW  !!!  
  • 7. Vision •  The  convergence  of  medicine  and  the  digital  revolu$on   will  produce  an  informa,on  ecosystem  that  will  facilitate   the  advent  of  safer  and  more  efficient  preven$ve,   diagnos$c  and  therapeu$c  solu$ons.       •  The  ci$zen  will  have  access  to  her  gene,c  profile  and   clinical  record,  and  will  monitor  and  adjust  her  health   using  next  genera$on  sensors  and  social  networks  to   share  this  informa$on  with  peers,  clinicians  and   researchers.      
  • 8. High-­‐capacity  Broadband  technologies  and  networks   •  The  availability  of  ultra-­‐high-­‐speed,  high-­‐capacity,   ubiquitous,  ‘always-­‐on’  broadband  connec$vity  will   contribute  to  the  development  of  an  integrated   digital  infrastructure  for  medicine,  reaching  the   ci,zen,  that  will  make  feasible  the  concepts  of   personalized  medicine  and  par$cipatory  health.     •  Ultra  high  speed  broadband  networks  will  be   required  to  transmit  enormous  volumes  of  data   from  pa$ents’  homes  to  health  prac$$oners  and   vice  versa  in  a  $mely  manner,  and  to  enable  the   processing  of  this  deluge  of  data.  
  • 9. Collecting genome data •  Benchtop  Ion  Proton™   Sequencer  –  designed  to   sequence  the  en$re  human   genome  in  a  day  for  $1,000  
  • 11. Collec$ng  exposome  data   •  Compilation of exposures experienced over an individual lifetime (Christopher Wild, 2005) •  OUTSIDE / INSIDE – Absorbed -- Industrial chemicals, combustion emissions, radiation, response to stress, physical activity levels – heat/cold, noise, food, microbiome •  Evaluating Personal Exposures •  Phones: Light meters, GPS, Accelerometer •  Senspod Monitor (Ozone, carbon monoxide, CO2, NO, Noise and UV) •  Arizona State University – Petroleum derived hydrocarbons (Benzene, Toluene)
  • 12. Remote  pa$ent  data  monitoring  and  data  collec$on   Environmental sensors Genomic sensors Phenomic sensors Environmental risk factors Biomarkers (DNA sequence, (pollution, radiation, toxic agents, …) proteins, gene expression, epigenetics Physiological, biochemical parameters (cholesterol, temperature, glucose, heart rate…) Integrated personal health record
  • 14. Patient Data (sensors and imaging) Sensors Genomic Phenomic Environmental Integrated Personal EHR Health Record Module 1 Health Profile GWAS Assessment Tables (weighted factors) Modelling Risks Diagnosis Personal Health Profile CDSS Health Profile Module 2 Improvement Trialbanks Networks Risk reduction Decision matrix, protocols Follow-up Personalised Therapy Health Recommendations
  • 15. Personalized   medicine  
  • 16. Defini$on   •  Personalized  medicine  uses  an   individual's  gene*c  (and  molecular)   profile  and  individual  informa*on   about  environmental  exposures  to   guide  decisions  made  in  regard  to  (risk   profiling)  and  the  preven*on,   diagnosis,  and  treatment  of  disease.     (Adapted  from  F.  Collins,  Director  NIH)  
  • 17. Clinical  applica$ons  of  genomic  informa$on   •  Pharmacogene$cs  –  Personalized   Medicine  Coali$on    -­‐  72  drugs  in   2011   •  Cys$c  fibrosis  –  successful  clinical   trial  for  a  specific  muta$on   •  Iden$fica$on  of  metabolic   diseases  
  • 19. Self-­‐genomics  -­‐  Clinical  annota$on  of   individual  genomes     •  Prof.  Quake  -­‐  Stanford  -­‐    -­‐  Nature  gene$cs   paper  -­‐  $50.000,  1  week,  Helicos.  Stanford   team  -­‐     •  Clinical annotation of genome from “patient Zero” –  Drug  metabolism   –  Rare  gene$c  variants  -­‐  rare  diseases   –  Common  gene$c  variants  -­‐  Risk  of   complex  diseases   Ashley et al. The Lancet, Volume 375, Issue 9725, Pages 1525 - 1535, 1 May 2010
  • 20. First  personal    longitudinal  OMICS  profiling  exercise   •  Combined  analysis  of  genomic,  transcriptomic,  proteomic,   metabolomic  and  immunological  profiles  from  a  single   individual  (one  of  the  authors-­‐    Prof.  Michael  Snyder),  over  a   14  month  period.  More  than  3  billion  measurements.     •  He  contracted  two  mild  viral  infec$ons  in  the  data-­‐gathering   period,  which  lem  their  molecular  signature  in  the  analyses.   •  During  one  of  these  infec$ons,  his  blood  glucose  levels  began   to  approach  those  of  a  diabetes  sufferer.  Amer  changing  his   diet  and  exercise  habits,  glucose  level  returned  to  normal.   •  This  study  shows  that  diseases  are  a  product  of  an  individual’s   gene$c  profile  as  well  as  interac$on  with  the  environment  and   that  disease  can  be  treated  based  on  molecular  informa$on.     (Chen  et  al,  Cell  148,  1293-­‐1307  March  16  2012  )  
  • 21. Par$cipatory   Health  
  • 22. Par$cipatory  Health   •  •  From Web 1.0 – Use of internet to find health information to Web 2.0 – web-based communities and services. NHS Social Care Model (NHS) •  A survey of 1,060 U.S. adults by the PwC Health Research Institute found that a third of respondents are gravitating toward social media as a place for discussions of health care. •  Pew Internet study – 27% of US internet users had tracked health data online •  Care management, disease management, supported self-care, promoting better health à Patients empowered, informed and involved in decision making, prevention and learning
  • 23. Par$cipatory  Health   self tracking devices Social web games Participatory Health mobile Internet of things sensors PCEHR
  • 24. PCEHR     •  Quality = patients reviewing their own records - Shared Medical Records •  MyHealth@Vanderbilt – information on prescriptions is shared. Knowledge management team – consumers will have convenient e-access to their medical records and genetic profiles to social media & games •  Facebook • Lifeline – support line for suicide • Organ donor status • Blood type – app will contact the user
  • 25. DIY  EHR-­‐  The  Cathedral  and  the   Bazaar  
  • 26. Social  media  as  a  research  tool   •  We  are  witnessing  a  transi$on  from  research  informa$on  systems   centralized  at  hospitals  and  clinical  research  centres  to  distributed  systems   that  reach  out  to  the  residence  of  any  ci$zen  /  pa$ent  who  opts  in.     •  Clinical  Research  with  the  pa$ents,  not  on  the  pa$ents   •  Examples   –  23andMe  –  Parkinson’s  Disease  –  PLoS  Gene$cs,  2  new  gene$c   associa$ons   –  Pa$entsLikeMe  –  Nature  Biotech.  Self-­‐reported  data  from  600  pa$ents   on  the  use  of  lithium  for  Amyotrophic  Lateral  Sclerosis  (ALS)  
  • 27. Crowdsourced  clinical  trials   •  DIY science, Crowdsourced Health Research Studies, Citizen science, Amateur Scientist, Self- Experimentation •  Patients Like Me – 125.000 members. 1000 condition- based communities –25 Papers published in PNAS, Nat Biotech, JMIR, … •  23andme – 23 and we – •  Acor, RevolutionHealth, Curetogether, Genomera, Althea Health
  • 28. •  Self  tracking  /  self  quan$fying  /  self  monitoring   •  The  belief  that  gathering  and  analysing  data  can  help  them  improve   their  lives!   •  QS’ers    doubling  every  year.–  5524  members,  42  meetup  groups   •  Larry  Smarr–  10years  quan$fying  his  body   –  Weight  –  physical  ac$vity:  calories  burnt  (body  media)  –  Food   intake  –  Sleep  (Zeo)  –  blood  chemicals  (60  Markers)  –   cholesterol/triglycerides  /  Apo  B  /  Ω  –  6,  Ω  –  3/  C-­‐reac$ve  protein   -­‐  Ultrasound  –  (plaque  in  arteries)  –  stool  test  –  colonoscopy  –   DNA  –  Microbiome     •  Fitbit  –  Sleep  –  Movement   •  +9000  health  apps,  each  person  connected  to  140  devices,  9  billion  of   connected  devices  now,  24  billion  by  2020   •  NODE  Sensor  Environment      
  • 29. Pa$ent  empowerment   Current NBN-enabled Driving forces: patient empowerment, networks personalized medicine, social networks EHR – Personally Citizens are able to maintain and control Electronic Controlled EHR their own health information Health Record Gene-disease Personal Citizens ask for genetic analysis of their association genomics DNA through the Internet and receive studies reports on various aspects of their health Clinical trials Crowdsourced The patient voluntarily shares information clinical trials on treatments and evolution of his/her illness with other patients
  • 30. Barriers •  New  regulatory  framework  (new  models  of  clinical   trials)   •  New  informa$cs  methods  to  compile  and  interpret  all   the  informa$on   •  Educa$on  of  pa$ents  and  health  professionals   •  Ethics,  data  security  and  confiden$ality  issues   •  Wide  availability  of  clinical  decision  support  systems  at   the  point-­‐of-­‐care   •  New  cost-­‐effec$veness  assessment  and  financial   models  of  care   •  Need  to  prove  clinical  effec$veness  before  DTC  services   are  offered.  
  • 31.
  • 32. Thank  you       sms@unimelb.edu.au   www.healthinforma$cs.unimelb.edu.au   Twiuer:  @ibeshbir