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Google BigQuery – A New
Way to Access Patent Data
April 2018
A lot of data – from a lot of sources
© 2017
R&D
Data – Lab
Results
Trials &
Test
Results
Sales &
Market
Data
Private Corporate Data Private Vendor Data
Public Data Providers Collaborators & Partners
Patent Data on BigQuery
© 2018
Not really “search” –
Instead SQL Query/ Join
Free Database – Google/IFI Public Patents
Free Database – EBI Data
Free Database – USPTO PAIR/PEDS
Paid Table – IFI Data Enrichments & others
Private Personal Data
Private Corporate Data
GoogleBigQueryReports based on
Connecting Data
from Multiple
Tables Together
What is BigQuery?
• Enterprise Cloud Data Warehouse
• BigQuery is Google's fully managed, petabyte scale, low
cost enterprise data warehouse.
• Low cost – but not free.
• A powerful Big Data analytics platform
• Analyze large datasets to find meaningful insights using
familiar SQL
• Join public, private, free and paid datasets – Including
Patent Data
© 2018
Example – Full Text Search
© 2018
IFI Global Patent Database
IFI CLAIMS Direct
"VEGF receptor kinase
inhibitor“~3
(vascular endothelial growth
factor)
2,294 Results
Assign a “Relevance Score”
and load into BigQuery as a
private table.
VEGF_Receptor.LCPatents – private table,
ordered by my private relevance field
© 2018
LCPatents (private)
lc_number lc_score
US-20130053409-A1 112
WO-2009053737-A2 116
US-20030144298-A1 126
US-20030055006-A1 130
JP-2002536414-A 132
CN-103702990-A 137
WO-2008078091-A1 142
EP-2269603-A1 146
EP-2783686-B1 146
US-8410131-B2 146
LCPatents (private) – Public Data,
ordered by my private relevance field
© 2018
LCPatents (private) patents-public-data.patents.publications
Row lc_number lc_score text
1 US-8778962-B2 148 Treatment of solid tumors with rapamycin derivatives
2 WO-2013014448-A1 148
2 - (2, 4, 5 - substituted -anilino) pyrimidine derivatives as egfr
modulators useful for treating cancer
3 EP-2269604-A1 147 Treatment of solid tumours with rapamycin derivatives
4 RU-2325906-C2 147 Cancer medical treatment
5 EP-2269603-B1 146
Treatment of breast tumors with a rapamycin derivative in
combination with exemestane
6 EP-2783686-A1 146
Combination of a rapamycin derivative and letrozole for
treating breast cancer
7 EP-2269604-B1 146 Treatment of solid kidney tumours with a rapamycin derivative
8 US-8877771-B2 146 Treatment of solid tumors with rapamycin derivatives
9 EP-2269603-A1 146 Treatment of solid tumours with rapamycin derivatives
LCPatents (private) – Public Data,
ordered by my private relevance field
© 2018
SELECT lc.lc_number, lc.lc_score, ttl.text
FROM `patents-public-data.patents.publications` AS ppd,
UNNEST(title_localized) AS ttl
JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS lc
ON lc.lc_number = ppd.publication_number
WHERE ttl.language = "en"
ORDER BY lc.lc_score DESC
LCPatents - IFI Private Data: COUNT
© 2017
Row assignee Total
1 AstraZeneca AB 102
2 Astex Therapeutics Ltd 84
3 Cancer Research Technology Ltd 33
4 NeuPharma Inc 32
5 Novartis AG 25
6 ForSight Vision4 Inc 22
7 Merck Sharp & Dohme Corp 21
8 Kinex Pharmaceuticals LLC 19
9 Eisai R&D Management Co Ltd 16
10 Novartis Pharma GmbH 15
11 University of Chicago 11
12 Medimmune Ltd 10
LCPatents IFI Data Enrichments
LCPatents - IFI Private Data: COUNT
© 2017
SELECT assignee, COUNT(IFI.publication_number) AS Total
FROM `striking-joy-185312.IFIDataEnrichments.IFIDataEnrichments` AS IFI,
UNNEST(original_assignee) AS assignee
JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS lc
ON IFI.publication_number = lc.lc_number
GROUP BY assignee ORDER BY Total DESC
© 2017
LCPatents (private) – Public Data –
IFI Paid Data
Row lc_number lc_score family_id
priority_
date
current_
assignee
legal_
status
1 JP-2004525899-A 152 26245731 20010219 Granted
2 WO-2013014448-A1 148 46875901 20110727
3 US-8778962-B2 148 26245731 20010219
Novartis
Pharmaceuticals
Corp
Active
4 EP-2269604-A1 147 26245731 20010219 Novartis AG Granted
5 RU-2325906-C2 147 26245731 20010219
6 CA-2438504-A1 146 26245731 20010219 Novartis AG Granted
7 CA-2438504-C 146 26245731 20010219 Novartis AG Active
8 EP-2764865-A2 146 26245731 20010219
Novartis Pharma
GmbH
Withdrawn
Novartis AG
9 EP-2762140-A1 146 26245731 20010219 Novartis AG Granted
LCPatents patents-public-data IFI Data Enrichments
LCPatents (private) – Public Data –
IFI Paid Data
© 2017
SELECT lc.lc_number, lc.lc_score, ppd.family_id, ppd.priority_date,
IFI.current_assignee, IFI.legal_status
FROM `striking-joy-185312.IFIDataEnrichments.IFIDataEnrichments` AS IFI
JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS lc
ON IFI.publication_number = lc.lc_number
JOIN `patents-public-data.patents.publications` AS ppd
ON lc.lc_number = ppd.publication_number
ORDER BY lc.lc_score DESC
SureChEMBL for LCPatents
© 2017
Row lc_number schembl_id smiles inchi_key field
1 US-20100092474-A1 SCHEMBL8755 COC1=CC=C(CN)C=C1
IDPURXSQCKYKIJ-
UHFFFAOYSA-N
5
2 WO-2008044041-A1 SCHEMBL8755 COC1=CC=C(CN)C=C1
IDPURXSQCKYKIJ-
UHFFFAOYSA-N
5
3 WO-2008044045-A1 SCHEMBL8755 COC1=CC=C(CN)C=C1
IDPURXSQCKYKIJ-
UHFFFAOYSA-N
5
4 US-20090306079-A1 SCHEMBL8755 COC1=CC=C(CN)C=C1
IDPURXSQCKYKIJ-
UHFFFAOYSA-N
5
5 US-20070021494-A1 SCHEMBL8755 COC1=CC=C(CN)C=C1
IDPURXSQCKYKIJ-
UHFFFAOYSA-N
5
6 US-7329660-B2 SCHEMBL104340 CC(C)C1=CC(N)=CC=C1
XCCNRBCNYGWTQX-
UHFFFAOYSA-N
5
7 WO-2008002674-A2 SCHEMBL133876 COC1=CC(O)=C(C=O)C=C1
WZUODJNEIXSNEU-
UHFFFAOYSA-N
5
8 WO-2014037750-A1 SCHEMBL309636 CCOC1=CC(Br)=CC=C1[N+]([O-])=O
SVFZXFVVGNPTEF-
UHFFFAOYSA-N
5
9 US-20100092474-A1 SCHEMBL383820 COC1=CC(C(O)=O)=C(C=C1)C(O)=O
JKZSIEDAEHZAHQ-
UHFFFAOYSA-N
5
10 WO-2008044041-A1 SCHEMBL383820 COC1=CC(C(O)=O)=C(C=C1)C(O)=O
JKZSIEDAEHZAHQ-
UHFFFAOYSA-N
5
LCPatents Ebi_surechembl
SureChEMBL for LCPatents
© 2017
SELECT v.lc_number, ebi.schembl_id, ebi.smiles, ebi.inchi_key, ebi.field
FROM `patents-public-data.ebi_surechembl.map` AS ebi
JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS v
ON v.lc_number = ebi.patent_id
WHERE ebi.field = "5"
LIMIT 100
ChEMBL Compound, Site, Target
© 2017
Row standard_inchi_key compound_name site_name target_type pref_name
61
HUMNYLRZRPPJDN-
UHFFFAOYSA-N
Benzaldehyde Tyrosinase, Tyrosinase domain SINGLE PROTEIN Tyrosinase
62
HUMNYLRZRPPJDN-
UHFFFAOYSA-N
Benzaldehyde Tyrosinase, Tyrosinase domain SINGLE PROTEIN Tyrosinase
63
HUMNYLRZRPPJDN-
UHFFFAOYSA-N
Benzaldehyde Tyrosinase, Tyrosinase domain SINGLE PROTEIN Tyrosinase
64
WGQKYBSKWIADBV-
UHFFFAOYSA-N
Benzyl amine
Phenylethanolamine N-
methyltransferase,
NNMT_PNMT_TEMT domain
SINGLE PROTEIN
Phenylethanolamine
N-methyltransferase
65
WGQKYBSKWIADBV-
UHFFFAOYSA-N
Benzyl amine
Phenylethanolamine N-
methyltransferase,
NNMT_PNMT_TEMT domain
SINGLE PROTEIN
Phenylethanolamine
N-methyltransferase
66
WGQKYBSKWIADBV-
UHFFFAOYSA-N
Benzyl amine
Phenylethanolamine N-
methyltransferase,
NNMT_PNMT_TEMT domain
SINGLE PROTEIN
Phenylethanolamine
N-methyltransferase
67
WGQKYBSKWIADBV-
UHFFFAOYSA-N
Benzyl amine
Phenylethanolamine N-
methyltransferase,
NNMT_PNMT_TEMT domain
SINGLE PROTEIN
Phenylethanolamine
N-methyltransferase
68
XKJCHHZQLQNZHY-
UHFFFAOYSA-N
SID144208998
Monoamine oxidase A,
Amino_oxidase domain
SINGLE PROTEIN Monoamine oxidase A
69
XKJCHHZQLQNZHY-
UHFFFAOYSA-N
SID144208998
Monoamine oxidase B,
Amino_oxidase domain
SINGLE PROTEIN Monoamine oxidase B
ChEMBL Compount, Site, Target
© 2017
SELECT cs.standard_inchi_key, cr.compound_name, bs.site_name,
td.target_type, td.pref_name
FROM `patents-public-data.ebi_chembl.target_dictionary_23` AS td
JOIN `patents-public-data.ebi_chembl.binding_sites_23` AS bs
ON td.tid = bs.tid
JOIN `patents-public-data.ebi_chembl.predicted_binding_domains_23` AS pbd
ON bs.site_id = pbd.site_id
JOIN `patents-public-data.ebi_chembl.activities_23` AS act
ON pbd.activity_id = act.activity_id
JOIN `patents-public-data.ebi_chembl.compound_structures_23` AS cs
ON act.molregno = cs.molregno
JOIN `patents-public-data.ebi_chembl.compound_records_23` AS cr
ON cr.molregno = cs.molregno
WHERE cs.standard_inchi_key IN
("JOXIMZWYDAKGHI-UHFFFAOYSA-N",
"XKJCHHZQLQNZHY-UHFFFAOYSA-N",
"RMVRSNDYEFQCLF-UHFFFAOYSA-N",
"WVDDGKGOMKODPV-UHFFFAOYSA-N",
"VODUKXHGDCJEOZ-YUMQZZPRSA-N",
"LGRFSURHDFAFJT-UHFFFAOYSA-N",
"WGQKYBSKWIADBV-UHFFFAOYSA-N",
"VOLRSQPSJGXRNJ-UHFFFAOYSA-N",
"WFQDTOYDVUWQMS-UHFFFAOYSA-N",
"HUMNYLRZRPPJDN-UHFFFAOYSA-N",
"RWZYAGGXGHYGMB-UHFFFAOYSA-N",
"DGJKKXAFDOWIQI-UHFFFAOYSA-N",
"KHBQMWCZKVMBLN-UHFFFAOYSA-N",
"KWOLFJPFCHCOCG-UHFFFAOYSA-N")
EBI – European Biomedical Institute
on BigQuery
© 2018
ebi_chembl ebi_surechembl
• Activities • Smiles
• Assays • Inchi_Key
• Components • Patent_ID
• Compounds
• Drug Indications
• Drug Mechanisms
• Molecules
• Proteins
• Targets
BigQuery Console
© 2018
LCPatents – USPTO OCE Office Actions
© 2018
LCPatents (private) uspto_oce_office_actions
1 of 1495 rows shown
Row
publication_
number
app_id action_type claim_numbers
1 US-8298578-B2 13252942 103
1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,1
8,19,20,21,22,23,24,25,26
2 US-9556120-B2 14554495
nonstatutory double
patenting
6,7,8,9,10,11,12,13,14,15,16,17
3 US-9572800-B2 15086485 103 1,2,3,4,5,6,7,8,9,10,11,12,13
4 US-9737544-B2 15000304
nonstatutory double
patenting
1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,1
8,19,20
5 US-9707202-B2 15044424
nonstatutory double
patenting
1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,1
9,20,21,22,23,24,25,26,27,28,29,30,31,32,3
3,34,35,36,37,38
6 US-9616050-B2 14840342
nonstatutory double
patenting
23,24,25,26,27,28,29,30
7 US-9707248-B2 15279361
nonstatutory double
patenting
1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,1
8,19,20,21,22,23,24
8 US-8642610-B2 13366726 112
9,11,12,13,14,15,16,17,18,19,20,21,35,48,4
9,50,51,52,53,112
9 US-8673906-B2 13765850
nonstatutory double
patenting
1,2,3,4,5,6,7,8,9,10,11,12
10 US-8277830-B2 13252998 103
1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,1
8,19,20,21,22,23,24,25,26,27,28,29
LCPatents (private) uspto_oce_office_actions
USPTO OCE Office Actions
© 2017
SELECT patents.publication_number, oa.app_id, oa.action_type,
oa.claim_numbers
FROM `patents-public-data.uspto_oce_office_actions.rejections` AS oa
JOIN `patents-public-data.uspto_oce_office_actions.match_app` AS match
ON oa.app_id = match.app_id
JOIN `patents-public-data.patents.publications` AS patents
ON match.application_number = patents.application_number
JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS VEGF
ON VEGF.lc_number = patents.publication_number
USPTO PTAB Cases
© 2017
SELECT ptab.PatentOwnerName, ptab.PatentNumber, ptab.PetitionerPartyName,
ptab.TrialNumber, ptab.ProsecutionStatus, IFI.original_assignee
FROM `patents-public-data.uspto_ptab.trials` AS ptab
JOIN `patents-public-data.uspto_ptab.match` AS ptab_match
ON ptab.ApplicationNumber = ptab_match.ApplicationNumber
JOIN `patents-public-data.patents.publications` AS PUBLIC
ON PUBLIC.application_number = ptab_match.application_number
JOIN `striking-joy-185312.IFIDataEnrichments.IFIDataEnrichments` AS IFI
ON IFI.publication_number = PUBLIC.publication_number
JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS VEGF
ON VEGF.lc_number = IFI.publication_number
Row
PatentOwner
Name
PatentNumber
Petitioner
PartyName
TrialNumber
Prosecution
Status
original_
assignee
1 Lane et al 8410131
Breckenridge
Pharmaceutial, Inc.
IPR2017-01592
Notice OF Filing
Date Accorded
Novartis
Pharmaceuticals
Corp
Patent Data on BigQuery Enhances
your Search Results
© 2018
Public Patent
Data
(free)
SureChEMBL
(free)
IFI Data
Enhancements
(paid)
Office Actions
(free)
uspto
uspto
PAIR, PTAB
(free)
Private,
On-Premise Data
(e.g., Docket)
Search Result
Portfolio
or
Any List
A Better
Search
Report
JOIN
Collaboration
© 2017
Share with google accounts or groups.
What this means to you
• BigQuery does not replace your text, semantic or
structure based search tools
• BigQuery does let you make your search results
more useful for:
• Your Legal Team
• Your Business Sponsors
• Your Research Partners
© 2018
SECRET Data Fields!
© 2017
VEGF patents with secret data code.
The secret code cannot be visible to
Google (even the Google Enterprise
Cloud)
Tableau Desktop: Local Excel to BigQuery
© 2017
Tableau Desktop + BigQuery
© 2017
BigQuery SQL Query Excel file on Desktoppub number
Data join is created used publication_number.
“Secret Code” is never transmitted to Google
Tableau Visualization
© 2017
Resources
• https://cloud.google.com/ - Google Cloud Platform
> Launcher for Google Patents Public Data
• Google Announcement
• https://github.com/google/patents-public-data - GitHub Home
for Google Patents
• Public Patent Data Now Available on Google BigQuery - IFI Blog
Post on BigQuery, with examples
• IFI Data Enrichments – Information on IFI’s paid data
enrichments
• W3 Schools SQL - SQL Reference
© 2018
Support comes with an IFI Data Enrichments Subscription!
Thank You!
Larry Cady
Senior Analyst
IFI CLAIMS Patent Services
larry.cady@ificlaims.com
info@ificlaims.com
© 2018

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IC-SDV 2018: Larry Cady (IFI Claims) Google’s BigQuery offers a new Way to access, explore and analyze public and private Patent Data

  • 1. Google BigQuery – A New Way to Access Patent Data April 2018
  • 2. A lot of data – from a lot of sources © 2017 R&D Data – Lab Results Trials & Test Results Sales & Market Data Private Corporate Data Private Vendor Data Public Data Providers Collaborators & Partners
  • 3. Patent Data on BigQuery © 2018 Not really “search” – Instead SQL Query/ Join Free Database – Google/IFI Public Patents Free Database – EBI Data Free Database – USPTO PAIR/PEDS Paid Table – IFI Data Enrichments & others Private Personal Data Private Corporate Data GoogleBigQueryReports based on Connecting Data from Multiple Tables Together
  • 4. What is BigQuery? • Enterprise Cloud Data Warehouse • BigQuery is Google's fully managed, petabyte scale, low cost enterprise data warehouse. • Low cost – but not free. • A powerful Big Data analytics platform • Analyze large datasets to find meaningful insights using familiar SQL • Join public, private, free and paid datasets – Including Patent Data © 2018
  • 5. Example – Full Text Search © 2018 IFI Global Patent Database IFI CLAIMS Direct "VEGF receptor kinase inhibitor“~3 (vascular endothelial growth factor) 2,294 Results Assign a “Relevance Score” and load into BigQuery as a private table.
  • 6. VEGF_Receptor.LCPatents – private table, ordered by my private relevance field © 2018 LCPatents (private) lc_number lc_score US-20130053409-A1 112 WO-2009053737-A2 116 US-20030144298-A1 126 US-20030055006-A1 130 JP-2002536414-A 132 CN-103702990-A 137 WO-2008078091-A1 142 EP-2269603-A1 146 EP-2783686-B1 146 US-8410131-B2 146
  • 7. LCPatents (private) – Public Data, ordered by my private relevance field © 2018 LCPatents (private) patents-public-data.patents.publications Row lc_number lc_score text 1 US-8778962-B2 148 Treatment of solid tumors with rapamycin derivatives 2 WO-2013014448-A1 148 2 - (2, 4, 5 - substituted -anilino) pyrimidine derivatives as egfr modulators useful for treating cancer 3 EP-2269604-A1 147 Treatment of solid tumours with rapamycin derivatives 4 RU-2325906-C2 147 Cancer medical treatment 5 EP-2269603-B1 146 Treatment of breast tumors with a rapamycin derivative in combination with exemestane 6 EP-2783686-A1 146 Combination of a rapamycin derivative and letrozole for treating breast cancer 7 EP-2269604-B1 146 Treatment of solid kidney tumours with a rapamycin derivative 8 US-8877771-B2 146 Treatment of solid tumors with rapamycin derivatives 9 EP-2269603-A1 146 Treatment of solid tumours with rapamycin derivatives
  • 8. LCPatents (private) – Public Data, ordered by my private relevance field © 2018 SELECT lc.lc_number, lc.lc_score, ttl.text FROM `patents-public-data.patents.publications` AS ppd, UNNEST(title_localized) AS ttl JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS lc ON lc.lc_number = ppd.publication_number WHERE ttl.language = "en" ORDER BY lc.lc_score DESC
  • 9. LCPatents - IFI Private Data: COUNT © 2017 Row assignee Total 1 AstraZeneca AB 102 2 Astex Therapeutics Ltd 84 3 Cancer Research Technology Ltd 33 4 NeuPharma Inc 32 5 Novartis AG 25 6 ForSight Vision4 Inc 22 7 Merck Sharp & Dohme Corp 21 8 Kinex Pharmaceuticals LLC 19 9 Eisai R&D Management Co Ltd 16 10 Novartis Pharma GmbH 15 11 University of Chicago 11 12 Medimmune Ltd 10 LCPatents IFI Data Enrichments
  • 10. LCPatents - IFI Private Data: COUNT © 2017 SELECT assignee, COUNT(IFI.publication_number) AS Total FROM `striking-joy-185312.IFIDataEnrichments.IFIDataEnrichments` AS IFI, UNNEST(original_assignee) AS assignee JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS lc ON IFI.publication_number = lc.lc_number GROUP BY assignee ORDER BY Total DESC
  • 11. © 2017 LCPatents (private) – Public Data – IFI Paid Data Row lc_number lc_score family_id priority_ date current_ assignee legal_ status 1 JP-2004525899-A 152 26245731 20010219 Granted 2 WO-2013014448-A1 148 46875901 20110727 3 US-8778962-B2 148 26245731 20010219 Novartis Pharmaceuticals Corp Active 4 EP-2269604-A1 147 26245731 20010219 Novartis AG Granted 5 RU-2325906-C2 147 26245731 20010219 6 CA-2438504-A1 146 26245731 20010219 Novartis AG Granted 7 CA-2438504-C 146 26245731 20010219 Novartis AG Active 8 EP-2764865-A2 146 26245731 20010219 Novartis Pharma GmbH Withdrawn Novartis AG 9 EP-2762140-A1 146 26245731 20010219 Novartis AG Granted LCPatents patents-public-data IFI Data Enrichments
  • 12. LCPatents (private) – Public Data – IFI Paid Data © 2017 SELECT lc.lc_number, lc.lc_score, ppd.family_id, ppd.priority_date, IFI.current_assignee, IFI.legal_status FROM `striking-joy-185312.IFIDataEnrichments.IFIDataEnrichments` AS IFI JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS lc ON IFI.publication_number = lc.lc_number JOIN `patents-public-data.patents.publications` AS ppd ON lc.lc_number = ppd.publication_number ORDER BY lc.lc_score DESC
  • 13. SureChEMBL for LCPatents © 2017 Row lc_number schembl_id smiles inchi_key field 1 US-20100092474-A1 SCHEMBL8755 COC1=CC=C(CN)C=C1 IDPURXSQCKYKIJ- UHFFFAOYSA-N 5 2 WO-2008044041-A1 SCHEMBL8755 COC1=CC=C(CN)C=C1 IDPURXSQCKYKIJ- UHFFFAOYSA-N 5 3 WO-2008044045-A1 SCHEMBL8755 COC1=CC=C(CN)C=C1 IDPURXSQCKYKIJ- UHFFFAOYSA-N 5 4 US-20090306079-A1 SCHEMBL8755 COC1=CC=C(CN)C=C1 IDPURXSQCKYKIJ- UHFFFAOYSA-N 5 5 US-20070021494-A1 SCHEMBL8755 COC1=CC=C(CN)C=C1 IDPURXSQCKYKIJ- UHFFFAOYSA-N 5 6 US-7329660-B2 SCHEMBL104340 CC(C)C1=CC(N)=CC=C1 XCCNRBCNYGWTQX- UHFFFAOYSA-N 5 7 WO-2008002674-A2 SCHEMBL133876 COC1=CC(O)=C(C=O)C=C1 WZUODJNEIXSNEU- UHFFFAOYSA-N 5 8 WO-2014037750-A1 SCHEMBL309636 CCOC1=CC(Br)=CC=C1[N+]([O-])=O SVFZXFVVGNPTEF- UHFFFAOYSA-N 5 9 US-20100092474-A1 SCHEMBL383820 COC1=CC(C(O)=O)=C(C=C1)C(O)=O JKZSIEDAEHZAHQ- UHFFFAOYSA-N 5 10 WO-2008044041-A1 SCHEMBL383820 COC1=CC(C(O)=O)=C(C=C1)C(O)=O JKZSIEDAEHZAHQ- UHFFFAOYSA-N 5 LCPatents Ebi_surechembl
  • 14. SureChEMBL for LCPatents © 2017 SELECT v.lc_number, ebi.schembl_id, ebi.smiles, ebi.inchi_key, ebi.field FROM `patents-public-data.ebi_surechembl.map` AS ebi JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS v ON v.lc_number = ebi.patent_id WHERE ebi.field = "5" LIMIT 100
  • 15. ChEMBL Compound, Site, Target © 2017 Row standard_inchi_key compound_name site_name target_type pref_name 61 HUMNYLRZRPPJDN- UHFFFAOYSA-N Benzaldehyde Tyrosinase, Tyrosinase domain SINGLE PROTEIN Tyrosinase 62 HUMNYLRZRPPJDN- UHFFFAOYSA-N Benzaldehyde Tyrosinase, Tyrosinase domain SINGLE PROTEIN Tyrosinase 63 HUMNYLRZRPPJDN- UHFFFAOYSA-N Benzaldehyde Tyrosinase, Tyrosinase domain SINGLE PROTEIN Tyrosinase 64 WGQKYBSKWIADBV- UHFFFAOYSA-N Benzyl amine Phenylethanolamine N- methyltransferase, NNMT_PNMT_TEMT domain SINGLE PROTEIN Phenylethanolamine N-methyltransferase 65 WGQKYBSKWIADBV- UHFFFAOYSA-N Benzyl amine Phenylethanolamine N- methyltransferase, NNMT_PNMT_TEMT domain SINGLE PROTEIN Phenylethanolamine N-methyltransferase 66 WGQKYBSKWIADBV- UHFFFAOYSA-N Benzyl amine Phenylethanolamine N- methyltransferase, NNMT_PNMT_TEMT domain SINGLE PROTEIN Phenylethanolamine N-methyltransferase 67 WGQKYBSKWIADBV- UHFFFAOYSA-N Benzyl amine Phenylethanolamine N- methyltransferase, NNMT_PNMT_TEMT domain SINGLE PROTEIN Phenylethanolamine N-methyltransferase 68 XKJCHHZQLQNZHY- UHFFFAOYSA-N SID144208998 Monoamine oxidase A, Amino_oxidase domain SINGLE PROTEIN Monoamine oxidase A 69 XKJCHHZQLQNZHY- UHFFFAOYSA-N SID144208998 Monoamine oxidase B, Amino_oxidase domain SINGLE PROTEIN Monoamine oxidase B
  • 16. ChEMBL Compount, Site, Target © 2017 SELECT cs.standard_inchi_key, cr.compound_name, bs.site_name, td.target_type, td.pref_name FROM `patents-public-data.ebi_chembl.target_dictionary_23` AS td JOIN `patents-public-data.ebi_chembl.binding_sites_23` AS bs ON td.tid = bs.tid JOIN `patents-public-data.ebi_chembl.predicted_binding_domains_23` AS pbd ON bs.site_id = pbd.site_id JOIN `patents-public-data.ebi_chembl.activities_23` AS act ON pbd.activity_id = act.activity_id JOIN `patents-public-data.ebi_chembl.compound_structures_23` AS cs ON act.molregno = cs.molregno JOIN `patents-public-data.ebi_chembl.compound_records_23` AS cr ON cr.molregno = cs.molregno WHERE cs.standard_inchi_key IN ("JOXIMZWYDAKGHI-UHFFFAOYSA-N", "XKJCHHZQLQNZHY-UHFFFAOYSA-N", "RMVRSNDYEFQCLF-UHFFFAOYSA-N", "WVDDGKGOMKODPV-UHFFFAOYSA-N", "VODUKXHGDCJEOZ-YUMQZZPRSA-N", "LGRFSURHDFAFJT-UHFFFAOYSA-N", "WGQKYBSKWIADBV-UHFFFAOYSA-N", "VOLRSQPSJGXRNJ-UHFFFAOYSA-N", "WFQDTOYDVUWQMS-UHFFFAOYSA-N", "HUMNYLRZRPPJDN-UHFFFAOYSA-N", "RWZYAGGXGHYGMB-UHFFFAOYSA-N", "DGJKKXAFDOWIQI-UHFFFAOYSA-N", "KHBQMWCZKVMBLN-UHFFFAOYSA-N", "KWOLFJPFCHCOCG-UHFFFAOYSA-N")
  • 17. EBI – European Biomedical Institute on BigQuery © 2018 ebi_chembl ebi_surechembl • Activities • Smiles • Assays • Inchi_Key • Components • Patent_ID • Compounds • Drug Indications • Drug Mechanisms • Molecules • Proteins • Targets
  • 19. LCPatents – USPTO OCE Office Actions © 2018 LCPatents (private) uspto_oce_office_actions 1 of 1495 rows shown Row publication_ number app_id action_type claim_numbers 1 US-8298578-B2 13252942 103 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,1 8,19,20,21,22,23,24,25,26 2 US-9556120-B2 14554495 nonstatutory double patenting 6,7,8,9,10,11,12,13,14,15,16,17 3 US-9572800-B2 15086485 103 1,2,3,4,5,6,7,8,9,10,11,12,13 4 US-9737544-B2 15000304 nonstatutory double patenting 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,1 8,19,20 5 US-9707202-B2 15044424 nonstatutory double patenting 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,1 9,20,21,22,23,24,25,26,27,28,29,30,31,32,3 3,34,35,36,37,38 6 US-9616050-B2 14840342 nonstatutory double patenting 23,24,25,26,27,28,29,30 7 US-9707248-B2 15279361 nonstatutory double patenting 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,1 8,19,20,21,22,23,24 8 US-8642610-B2 13366726 112 9,11,12,13,14,15,16,17,18,19,20,21,35,48,4 9,50,51,52,53,112 9 US-8673906-B2 13765850 nonstatutory double patenting 1,2,3,4,5,6,7,8,9,10,11,12 10 US-8277830-B2 13252998 103 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,1 8,19,20,21,22,23,24,25,26,27,28,29 LCPatents (private) uspto_oce_office_actions
  • 20. USPTO OCE Office Actions © 2017 SELECT patents.publication_number, oa.app_id, oa.action_type, oa.claim_numbers FROM `patents-public-data.uspto_oce_office_actions.rejections` AS oa JOIN `patents-public-data.uspto_oce_office_actions.match_app` AS match ON oa.app_id = match.app_id JOIN `patents-public-data.patents.publications` AS patents ON match.application_number = patents.application_number JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS VEGF ON VEGF.lc_number = patents.publication_number
  • 21. USPTO PTAB Cases © 2017 SELECT ptab.PatentOwnerName, ptab.PatentNumber, ptab.PetitionerPartyName, ptab.TrialNumber, ptab.ProsecutionStatus, IFI.original_assignee FROM `patents-public-data.uspto_ptab.trials` AS ptab JOIN `patents-public-data.uspto_ptab.match` AS ptab_match ON ptab.ApplicationNumber = ptab_match.ApplicationNumber JOIN `patents-public-data.patents.publications` AS PUBLIC ON PUBLIC.application_number = ptab_match.application_number JOIN `striking-joy-185312.IFIDataEnrichments.IFIDataEnrichments` AS IFI ON IFI.publication_number = PUBLIC.publication_number JOIN `civil-dolphin-136720.VEGF_Receptor.LCPatents` AS VEGF ON VEGF.lc_number = IFI.publication_number Row PatentOwner Name PatentNumber Petitioner PartyName TrialNumber Prosecution Status original_ assignee 1 Lane et al 8410131 Breckenridge Pharmaceutial, Inc. IPR2017-01592 Notice OF Filing Date Accorded Novartis Pharmaceuticals Corp
  • 22. Patent Data on BigQuery Enhances your Search Results © 2018 Public Patent Data (free) SureChEMBL (free) IFI Data Enhancements (paid) Office Actions (free) uspto uspto PAIR, PTAB (free) Private, On-Premise Data (e.g., Docket) Search Result Portfolio or Any List A Better Search Report JOIN
  • 23. Collaboration © 2017 Share with google accounts or groups.
  • 24. What this means to you • BigQuery does not replace your text, semantic or structure based search tools • BigQuery does let you make your search results more useful for: • Your Legal Team • Your Business Sponsors • Your Research Partners © 2018
  • 25. SECRET Data Fields! © 2017 VEGF patents with secret data code. The secret code cannot be visible to Google (even the Google Enterprise Cloud)
  • 26. Tableau Desktop: Local Excel to BigQuery © 2017
  • 27. Tableau Desktop + BigQuery © 2017 BigQuery SQL Query Excel file on Desktoppub number Data join is created used publication_number. “Secret Code” is never transmitted to Google
  • 29. Resources • https://cloud.google.com/ - Google Cloud Platform > Launcher for Google Patents Public Data • Google Announcement • https://github.com/google/patents-public-data - GitHub Home for Google Patents • Public Patent Data Now Available on Google BigQuery - IFI Blog Post on BigQuery, with examples • IFI Data Enrichments – Information on IFI’s paid data enrichments • W3 Schools SQL - SQL Reference © 2018 Support comes with an IFI Data Enrichments Subscription!
  • 30. Thank You! Larry Cady Senior Analyst IFI CLAIMS Patent Services larry.cady@ificlaims.com info@ificlaims.com © 2018