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Duke University
Some mechanisms of
soil-plant-atmosphere interaction
!
Marco Marani (Univ. di Padova & Duke Univ.)
Gabriele Manoli (U. di Padova & Duke U.)
Sara Bonetti (Duke U.)
Valeria Volpe (U. di Padova)
Gabriel Katul (Duke U.)
John Albertson (Duke U.)
Jean Cristophe Domec (Duke U.& U. de Bordeaux)
Mario Putti (U. di Padova)
Interdisciplinary	
  Workshop	
  on	
  Frontiers	
  in	
  Hydrology	
  and	
  
Hydrogeoscience	
  
8-­9	
  May	
  2014,	
  Venice	
  International	
  University,	
  Venice,	
  Italy
Soil-plant-atmosphere interactions are important
Pe
Pi
P
ET
Atmospheric
Input
Atmospheric
Output
Incoming
Runoff
Outgoing
Runoff
Study Region
Global water cycle
Regional water recycling
Terrestrial
Carbon
cycle
Crop responses to…
Vegetated soil Bare soil
Soil moisture dynamics in vegetated and bare soils
Volpeetal.,2013
Transpiration and Photosynthesis,
an often-neglected coupling
Transpiration and Photosynthesis
An often-neglected coupling
Importance of root distribution
(li) in determining overall
resistance to flow.
( ) ( )[ ] xRRLLxLR AzzψgT ⋅+−+⋅−= ψψψ ),(
( ) ( )[ ] riiRRiLRi Azzgq ⋅+−+⋅−= ψψψψ ),(
cwLsLw ALAIVPDgaf ⋅⋅⋅⋅⋅= εψψ )()(
Soil-Plant-Atmosphere continuum model
Leaf-Atmosphere
Xylem-Leaf
Root-Xylem ΨR
ΨL
CO2
gx
gs
gs
T
0=
∂
∂
−
∂
∂
s
w
s
c
g
f
g
f
λ
(Katul et al., 2010)
( )Lsg ψ
( )[ ] ( )Lrs
w
ws qzKK
t
S
t
SS ψψψϕ
ψ
,++∇⋅∇=
∂
∂
+
∂
∂
Variably saturated flow (Cathy):
H2O
(Volpe et al., 2011)
Volpe et al., 2013;
Manoli et al., 2014
(Paniconi and Putti, 1994)
Root vs. Darcy flows integrated within the root zone
Volpe et al., 2013
Manoli et al., 2014
Model and obs. in NC Coastal Forest
RWU RWU
Root Hydraulic Redistribution Root Hydraulic Redistribution
Darcy flow divergence Darcy flow divergence
RootHydraulicRedistributionandspatialinteractions
Manolietal.,2014
Lumped Transpiration-Soil Saturation Relations
Pure drainage
Infiltration & drainage
Manoli et al., 2014
Clouds
Transpiration
z
ABL
LCL
Free Atmosphere
sunrise mid-morning
SoilPlantAtmosphere
mid-afternoon
Clouds
z
ρ [Ωm]
200
40
120
ABL
LCL
Free Atmosphere
sunrise mid-morning
SoilPlantAtmosphere
mid-afternoon
Transpiration
Convective Rainfall Initiation
Bonetti et al., 2014
Convective Rainfall Initiation
),( RHTzz aLCLLCL =
ABLT
sABL
z
H
dt
dz
⋅
+⋅
=
γ
β)1(
( ) ( )( )STGfLETR
c
H wSn
ap
s −−−
⋅
=
ρ
1
( )VPDgg Lss ,ψ=
( ) ( )
100
RH
TeTeVPD asss ⋅−=
( )
dt
dz
TTH
dt
dT
z ABL
aFAs
a
ABL ⋅−+=
( )
dt
dz
ww
LE
dt
dw
z ABL
FA
a
ABL ⋅−+=
λρ
z
Conservation Eqs. (well mixed
ABL ):
ABL potential temperature, Ta
Specific humidity, w
( )[ ] ( )Lrs
w
ws qzKK
t
S
t
SS ψψψϕ
ψ
,++∇⋅∇=
∂
∂
+
∂
∂
Bonetti et al., 2014
Modeled ABL-LCL intersection and observed rainfall
Soil-Plant-ABL model
Atmospheric feedback
When atmospheric
feedback
Is turned off
RAIN
NO RAIN
MoisturefromFreeAtmosphere
Conclusions
Importance of water vertical redistribution in increasing water availability to plants.
Relative role of root vs. Darcy water redistribution;
overlapping root systems enhance water stress but do not alter averaged Transpiration
vs. mean soil moisture relations;
the role of vegetation controls and WT fluctuations on the predisposition of convective
rainfall
Coupled carbon and water uptake modeling contribute to understanding collective
responses of carbon and water cycles.
ρ [Ωm]
200
40
120
Challenges and Opportunities
Getting the right results for the right reason requires space-
time characterizations of active root biomass: ERT and SPA
modeling to play an important role.
Root biomass allocation strategies: SPA modeling and Space-
time active root mapping to yield insight into biomass
allocation strategies.
Climate change responses of the SPA system: subgrid
parameterization?

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Soil Plants Atmosphere dynamics

  • 1. Duke University Some mechanisms of soil-plant-atmosphere interaction ! Marco Marani (Univ. di Padova & Duke Univ.) Gabriele Manoli (U. di Padova & Duke U.) Sara Bonetti (Duke U.) Valeria Volpe (U. di Padova) Gabriel Katul (Duke U.) John Albertson (Duke U.) Jean Cristophe Domec (Duke U.& U. de Bordeaux) Mario Putti (U. di Padova) Interdisciplinary  Workshop  on  Frontiers  in  Hydrology  and   Hydrogeoscience   8-­9  May  2014,  Venice  International  University,  Venice,  Italy
  • 2. Soil-plant-atmosphere interactions are important Pe Pi P ET Atmospheric Input Atmospheric Output Incoming Runoff Outgoing Runoff Study Region Global water cycle Regional water recycling Terrestrial Carbon cycle Crop responses to…
  • 3. Vegetated soil Bare soil Soil moisture dynamics in vegetated and bare soils Volpeetal.,2013
  • 4. Transpiration and Photosynthesis, an often-neglected coupling
  • 5. Transpiration and Photosynthesis An often-neglected coupling Importance of root distribution (li) in determining overall resistance to flow.
  • 6. ( ) ( )[ ] xRRLLxLR AzzψgT ⋅+−+⋅−= ψψψ ),( ( ) ( )[ ] riiRRiLRi Azzgq ⋅+−+⋅−= ψψψψ ),( cwLsLw ALAIVPDgaf ⋅⋅⋅⋅⋅= εψψ )()( Soil-Plant-Atmosphere continuum model Leaf-Atmosphere Xylem-Leaf Root-Xylem ΨR ΨL CO2 gx gs gs T 0= ∂ ∂ − ∂ ∂ s w s c g f g f λ (Katul et al., 2010) ( )Lsg ψ ( )[ ] ( )Lrs w ws qzKK t S t SS ψψψϕ ψ ,++∇⋅∇= ∂ ∂ + ∂ ∂ Variably saturated flow (Cathy): H2O (Volpe et al., 2011) Volpe et al., 2013; Manoli et al., 2014 (Paniconi and Putti, 1994)
  • 7. Root vs. Darcy flows integrated within the root zone Volpe et al., 2013
  • 8. Manoli et al., 2014 Model and obs. in NC Coastal Forest
  • 9. RWU RWU Root Hydraulic Redistribution Root Hydraulic Redistribution Darcy flow divergence Darcy flow divergence RootHydraulicRedistributionandspatialinteractions Manolietal.,2014
  • 10. Lumped Transpiration-Soil Saturation Relations Pure drainage Infiltration & drainage Manoli et al., 2014
  • 12. Clouds z ρ [Ωm] 200 40 120 ABL LCL Free Atmosphere sunrise mid-morning SoilPlantAtmosphere mid-afternoon Transpiration
  • 14. Convective Rainfall Initiation ),( RHTzz aLCLLCL = ABLT sABL z H dt dz ⋅ +⋅ = γ β)1( ( ) ( )( )STGfLETR c H wSn ap s −−− ⋅ = ρ 1 ( )VPDgg Lss ,ψ= ( ) ( ) 100 RH TeTeVPD asss ⋅−= ( ) dt dz TTH dt dT z ABL aFAs a ABL ⋅−+= ( ) dt dz ww LE dt dw z ABL FA a ABL ⋅−+= λρ z Conservation Eqs. (well mixed ABL ): ABL potential temperature, Ta Specific humidity, w ( )[ ] ( )Lrs w ws qzKK t S t SS ψψψϕ ψ ,++∇⋅∇= ∂ ∂ + ∂ ∂ Bonetti et al., 2014
  • 15. Modeled ABL-LCL intersection and observed rainfall
  • 16. Soil-Plant-ABL model Atmospheric feedback When atmospheric feedback Is turned off RAIN NO RAIN MoisturefromFreeAtmosphere
  • 17. Conclusions Importance of water vertical redistribution in increasing water availability to plants. Relative role of root vs. Darcy water redistribution; overlapping root systems enhance water stress but do not alter averaged Transpiration vs. mean soil moisture relations; the role of vegetation controls and WT fluctuations on the predisposition of convective rainfall Coupled carbon and water uptake modeling contribute to understanding collective responses of carbon and water cycles. ρ [Ωm] 200 40 120 Challenges and Opportunities Getting the right results for the right reason requires space- time characterizations of active root biomass: ERT and SPA modeling to play an important role. Root biomass allocation strategies: SPA modeling and Space- time active root mapping to yield insight into biomass allocation strategies. Climate change responses of the SPA system: subgrid parameterization?