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* Definition of normal flora
* species of normal flora
* Advantages and disadvantages
* Symbiotic relationship
* Types of normal flora
Resident Flora transient flora
* Tissue Specificity of Normal Flora
1. Tissue tropism
2. Specific adherence
3. Biofilm formation
*Normal Flora and human body
Skin
Eyes (i.e. Conjunctiva)
Oral and Upper Respiratory Tract
Urogenital tract
Gastrointestinal tract and rectum
* Diseases caused by microbiota
* Fungi
* Viruses * Conclusion * References
1.Provide a first line of defense against microbial pathogens
through “bacterial interference”.
interference may involve competition for receptors or
binding sites on host cells, competition for nutrients.
2. Assist in digestion: They produce vitamin B and vitamin K
in intestine.
3.play a role in toxin degradation
4.The oral flora contribute to immunity by inducing low
levels of circulating and secretory antibodies that may cross
react with pathogens.
.
5. the microbiota affect carcinogenesis in three broad ways:
(i) altering the balance of tumor cell proliferation and
death.
(ii) regulating immune system function .
(iii) influencing metabolism of host-produced factors, foods
and pharmaceuticals
such as : Lactobacillus and Bifidobacteria, are known to
prevent tumor formation
They can cause disease in the
following:
a) When individuals become
immunocompromised.
b) When they change their usual
anatomic location.
 1. Mutualistic
 Both organisms benefit – “mutually beneficial”
 Exp: Escherichia coli
 Synthesizes Vitamin K & B complex Vitamins
 In return, we provide a warm, moist nutrient rich
environment for E. coli.
 2. Commensalistic
 One organism benefits, the other is neither helped nor
harmed
 3. Opportunistic
 Under normal conditions, microbe does not cause
disease, but if conditions become conducive , it can
cause disease.
 Escherichia coli - normally in our digestive tract where
tract where it causes no problems, but if it gets into the
urinary tract it can become pathogenic.
 Staphylococcus aureus – commonly found in the upper
the upper respiratory tract, but if it gets into a wound
or a burn it can become pathogenic.
 1. Resident Flora
 Microbes that are always present
 2. Transient Flora
 Microbes that live in or on your body for a period of time
(hours, days, weeks, months) then move on or die off
 Remain in the body for only hours to months before
disappearing
 Found in the same regions as resident microbiota
 Cannot persist in the body…because…
 Competition from other microorganisms
 Elimination by the body’s defenses cells
 Chemical or physical changes in the body
If the resident microbiota is disturbed, transient
microorganisms may colonize, proliferate, and produce
disease.
Most members of the normal bacterial flora prefer to
colonize certain tissues and not others. This "tissue
specificity" is usually due to properties of both the host
and the bacterium.
Usually, specific bacteria colonize specific tissues by one
or another of these mechanisms:
1. Tissue tropism
2. Specific adherence
3. Biofilm formation
is the bacterial preference for certain tissues for
growth. One explanation for tissue tropism is that the host provides
essential nutrients and growth factors for the bacterium, in addition
to suitable oxygen, pH, and temperature for growth.
Lactobacillus acidophilus, informally known as "Doderlein's bacillus" colonizes the vagina
because glycogen is produced which provides the bacteria with a source of sugar that they
ferment to lactic acid.
Most bacteria can colonize in specific tissue
because they can adhere to that tissue in a specific manner that
involves chemical interactions between bacterial surface components
and host cell molecular receptors. The bacterial components are
molecular parts of their capsules, fimbriae, or cell walls. The
receptors on human cells are usually glycoprotein molecules located
on the host cell.
Bacterium Bacterial adhesin Attachment site
Streptococcus pyogenes Cell-bound protein (M-
protein)
Pharyngeal epithelium
Streptococcus mutans Cell- bound protein (Glycosyl
transferase)
Pellicle of tooth
Streptococcus salivarius Lipoteichoic acid Buccal epithelium of tongue
Bordetella pertussis Fimbriae ("filamentous
hemagglutinin")
Respiratory epithelium
Vibrio cholerae N-methylphenylalanine pili Intestinal epithelium
Mycoplasma Membrane protein Respiratory epithelium
Some of the indigenous bacteria are able to construct biofilms on a
tissue surface, or they are able to colonize a biofilm built by another
bacterial species.
Biofilms usually occur when one bacterial species attaches
specifically or non specifically to a surface, and then secretes
carbohydrate slime that imbeds the bacteria and attracts other
microbes to the biofilm for protection or nutritional advantages.
In a healthy human, the internal
tissues such as:
 blood
 brain
 muscle
 crebro spinal fluid (c.sf.)
are normally free of
microorganisms.
 Skin
 Eyes (i.e. Conjunctiva)
 Oral and Upper Respiratory Tract
 Urogenital tract
 Gastrointestinal tract and rectum
Staphylococcus epidermidis
Staphylococcus aureus (in small numbers)
Micrococcus species
α-Hemolytic and non hemolytic streptococci
(eg, Streptococcus mitis)
Corynebacterium species
Propionibacterium species
Peptostreptococcus species
Acinetobacter species
Small numbers of other organisms (Candida species, Pseudomonas
aeruginosa, etc)
Diphtheroids , nonpathogenic Neisseria species, α-
hemolytic streptococci; S epidermidis, non hemolytic streptococci,
anaerobes (too many species to list) Prevotella species, anaerobic
cocci, Fusobacterium species, etc
Lesser amounts of the following when accompanied by organisms
listed above: yeasts, Haemophilus species, pneumococci, S aureus,
gram negative
rods, Neisseria meningitidis
Various Enterobacteriaceae except Salmonella, Shigella, Yersinia.
Campylobacter species
Glucose non-fermenting gram-negative rods Enterococci
α-Hemolytic and non hemolytic streptococci
Diphtheroids
Staphylococcus aureus in small numbers
Yeasts in small numbers
Anaerobes in large numbers.
Corynebacterium species, Lactobacillus species, α-hemolytic and
nonhemolytic streptococci, nonpathogenic
Neisseria species
enterococci, Enterobacteriaceae and other gram-negative rods,
Staphylococcus epidermidis,
Candida albicans, and other yeasts
Anaerobes (too many to list); : Prevotella, Clostridium, and
Peptostreptococcus species
The conjunctiva harbors few or no organisms.
Haemophilus and Staphylococcus are among the genera most often
genera most often detected.
For example, streptococci of the viridans group are the most common
resident organisms of the upper respiratory tract. If large numbers of
them are introduced into the bloodstream (eg, after tooth extraction
or oral surgery), they may settle on deformed or prosthetic heart
valves and produce infective endocarditis.
are the most common resident bacteria of the large intestine
quite harmless in that location. However, if introduced into the
peritoneal cavity or into pelvic tissues along with other bacteria
result of trauma, they cause suppuration and bacteremia
Some genera of bacteria, such as : Bacteroides and Clostridium ,
have been associated with an increase in tumor growth rate.
Fungi, in particular yeasts , are present in the human gut.
The best-studied of these are candida species due to their ability to
become pathogenic in immunocompromised and even in healthy
hosts Yeasts are also present on the skin , such as malassezia species,
where they consume oils secreted from the sebaceous gland.
Viruses, especially bacterial viruses (bacteriophages), colonize
various body sites. These colonized sites include the
skin, gut, lungs, and oral cavity. Virus communities have been
associated with some diseases, and do not simply reflect the
bacterial communities.
*Normal flora (microbiota) colonize in human bodies since birth until death , some
species are benefit to human such as : defense against pathogens , produce
vitamin K and B ,which known as “mutualistic”.
*In certain situations may become pathogen especially when change normal
region or immunosuppression “opportunistic” .
*Microbiota consists of bacteria , fungi and viruses and the common sites where
colonize are skin, mouth , respiratory tract, gastrointestinal tract , eye and genital.
*Some regions are sterile (no microbiota) which are blood , brain , muscle and CSF.
*Tissue specificity" is usually due to properties of both the host and the bacterium.
:
* Medical Microbiology, 4th edition , Samuel Baron.
*Jawetz Melnick&Adelbergs Medical Microbiology ,
26thedition , Janet Butel and Karen C. Carroll
Normal Flora Microbiota and Their Role in Human Health

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Normal Flora Microbiota and Their Role in Human Health

  • 1.
  • 2. * Definition of normal flora * species of normal flora * Advantages and disadvantages * Symbiotic relationship * Types of normal flora Resident Flora transient flora * Tissue Specificity of Normal Flora 1. Tissue tropism 2. Specific adherence 3. Biofilm formation *Normal Flora and human body Skin Eyes (i.e. Conjunctiva) Oral and Upper Respiratory Tract Urogenital tract Gastrointestinal tract and rectum * Diseases caused by microbiota * Fungi * Viruses * Conclusion * References
  • 3.
  • 4.
  • 5.
  • 6. 1.Provide a first line of defense against microbial pathogens through “bacterial interference”. interference may involve competition for receptors or binding sites on host cells, competition for nutrients.
  • 7.
  • 8. 2. Assist in digestion: They produce vitamin B and vitamin K in intestine. 3.play a role in toxin degradation 4.The oral flora contribute to immunity by inducing low levels of circulating and secretory antibodies that may cross react with pathogens. .
  • 9. 5. the microbiota affect carcinogenesis in three broad ways: (i) altering the balance of tumor cell proliferation and death. (ii) regulating immune system function . (iii) influencing metabolism of host-produced factors, foods and pharmaceuticals such as : Lactobacillus and Bifidobacteria, are known to prevent tumor formation
  • 10. They can cause disease in the following: a) When individuals become immunocompromised. b) When they change their usual anatomic location.
  • 11.  1. Mutualistic  Both organisms benefit – “mutually beneficial”  Exp: Escherichia coli  Synthesizes Vitamin K & B complex Vitamins  In return, we provide a warm, moist nutrient rich environment for E. coli.  2. Commensalistic  One organism benefits, the other is neither helped nor harmed
  • 12.  3. Opportunistic  Under normal conditions, microbe does not cause disease, but if conditions become conducive , it can cause disease.  Escherichia coli - normally in our digestive tract where tract where it causes no problems, but if it gets into the urinary tract it can become pathogenic.  Staphylococcus aureus – commonly found in the upper the upper respiratory tract, but if it gets into a wound or a burn it can become pathogenic.
  • 13.  1. Resident Flora  Microbes that are always present  2. Transient Flora  Microbes that live in or on your body for a period of time (hours, days, weeks, months) then move on or die off
  • 14.  Remain in the body for only hours to months before disappearing  Found in the same regions as resident microbiota  Cannot persist in the body…because…  Competition from other microorganisms  Elimination by the body’s defenses cells  Chemical or physical changes in the body
  • 15. If the resident microbiota is disturbed, transient microorganisms may colonize, proliferate, and produce disease.
  • 16. Most members of the normal bacterial flora prefer to colonize certain tissues and not others. This "tissue specificity" is usually due to properties of both the host and the bacterium. Usually, specific bacteria colonize specific tissues by one or another of these mechanisms: 1. Tissue tropism 2. Specific adherence 3. Biofilm formation
  • 17. is the bacterial preference for certain tissues for growth. One explanation for tissue tropism is that the host provides essential nutrients and growth factors for the bacterium, in addition to suitable oxygen, pH, and temperature for growth. Lactobacillus acidophilus, informally known as "Doderlein's bacillus" colonizes the vagina because glycogen is produced which provides the bacteria with a source of sugar that they ferment to lactic acid.
  • 18. Most bacteria can colonize in specific tissue because they can adhere to that tissue in a specific manner that involves chemical interactions between bacterial surface components and host cell molecular receptors. The bacterial components are molecular parts of their capsules, fimbriae, or cell walls. The receptors on human cells are usually glycoprotein molecules located on the host cell.
  • 19. Bacterium Bacterial adhesin Attachment site Streptococcus pyogenes Cell-bound protein (M- protein) Pharyngeal epithelium Streptococcus mutans Cell- bound protein (Glycosyl transferase) Pellicle of tooth Streptococcus salivarius Lipoteichoic acid Buccal epithelium of tongue Bordetella pertussis Fimbriae ("filamentous hemagglutinin") Respiratory epithelium Vibrio cholerae N-methylphenylalanine pili Intestinal epithelium Mycoplasma Membrane protein Respiratory epithelium
  • 20. Some of the indigenous bacteria are able to construct biofilms on a tissue surface, or they are able to colonize a biofilm built by another bacterial species. Biofilms usually occur when one bacterial species attaches specifically or non specifically to a surface, and then secretes carbohydrate slime that imbeds the bacteria and attracts other microbes to the biofilm for protection or nutritional advantages.
  • 21.
  • 22. In a healthy human, the internal tissues such as:  blood  brain  muscle  crebro spinal fluid (c.sf.) are normally free of microorganisms.
  • 23.  Skin  Eyes (i.e. Conjunctiva)  Oral and Upper Respiratory Tract  Urogenital tract  Gastrointestinal tract and rectum
  • 24.
  • 25. Staphylococcus epidermidis Staphylococcus aureus (in small numbers) Micrococcus species α-Hemolytic and non hemolytic streptococci (eg, Streptococcus mitis) Corynebacterium species Propionibacterium species Peptostreptococcus species Acinetobacter species Small numbers of other organisms (Candida species, Pseudomonas aeruginosa, etc)
  • 26. Diphtheroids , nonpathogenic Neisseria species, α- hemolytic streptococci; S epidermidis, non hemolytic streptococci, anaerobes (too many species to list) Prevotella species, anaerobic cocci, Fusobacterium species, etc Lesser amounts of the following when accompanied by organisms listed above: yeasts, Haemophilus species, pneumococci, S aureus, gram negative rods, Neisseria meningitidis
  • 27.
  • 28. Various Enterobacteriaceae except Salmonella, Shigella, Yersinia. Campylobacter species Glucose non-fermenting gram-negative rods Enterococci α-Hemolytic and non hemolytic streptococci Diphtheroids Staphylococcus aureus in small numbers Yeasts in small numbers Anaerobes in large numbers.
  • 29. Corynebacterium species, Lactobacillus species, α-hemolytic and nonhemolytic streptococci, nonpathogenic Neisseria species enterococci, Enterobacteriaceae and other gram-negative rods, Staphylococcus epidermidis, Candida albicans, and other yeasts Anaerobes (too many to list); : Prevotella, Clostridium, and Peptostreptococcus species
  • 30. The conjunctiva harbors few or no organisms. Haemophilus and Staphylococcus are among the genera most often genera most often detected.
  • 31. For example, streptococci of the viridans group are the most common resident organisms of the upper respiratory tract. If large numbers of them are introduced into the bloodstream (eg, after tooth extraction or oral surgery), they may settle on deformed or prosthetic heart valves and produce infective endocarditis.
  • 32. are the most common resident bacteria of the large intestine quite harmless in that location. However, if introduced into the peritoneal cavity or into pelvic tissues along with other bacteria result of trauma, they cause suppuration and bacteremia
  • 33. Some genera of bacteria, such as : Bacteroides and Clostridium , have been associated with an increase in tumor growth rate.
  • 34.
  • 35. Fungi, in particular yeasts , are present in the human gut. The best-studied of these are candida species due to their ability to become pathogenic in immunocompromised and even in healthy hosts Yeasts are also present on the skin , such as malassezia species, where they consume oils secreted from the sebaceous gland.
  • 36. Viruses, especially bacterial viruses (bacteriophages), colonize various body sites. These colonized sites include the skin, gut, lungs, and oral cavity. Virus communities have been associated with some diseases, and do not simply reflect the bacterial communities.
  • 37. *Normal flora (microbiota) colonize in human bodies since birth until death , some species are benefit to human such as : defense against pathogens , produce vitamin K and B ,which known as “mutualistic”. *In certain situations may become pathogen especially when change normal region or immunosuppression “opportunistic” . *Microbiota consists of bacteria , fungi and viruses and the common sites where colonize are skin, mouth , respiratory tract, gastrointestinal tract , eye and genital. *Some regions are sterile (no microbiota) which are blood , brain , muscle and CSF. *Tissue specificity" is usually due to properties of both the host and the bacterium.
  • 38. : * Medical Microbiology, 4th edition , Samuel Baron. *Jawetz Melnick&Adelbergs Medical Microbiology , 26thedition , Janet Butel and Karen C. Carroll