2. Basics of chromosomes
Term Chromosome derived from greek
words(chroma;colour)(soma;body) because of its
strong staining with dyes
Chromosome is made up of DNA ,histone proteins
and chaperone proteins
Human cell contain 23pairs of chromosomes ;22
pairs are autosomes and one pair is sex
chromosomes
3.
4. Karyotype: it is a image or photograph of standard
arrangement of chromosomes in decreasing order of their
length
5. Cells used for chromosomal analysis
Any cell with a nucleus can be used but actively dividing
cells are preferred
Lymphocytes
Skin cells
Tumor cells
Amniotic cells
Chorionic cells
Rare fetal cells from maternal blood
6.
7. Other cytogenetic studies used for chromosomal analysis
are
FISH (fluorescent in situ hybridisation technique)
FISH is a cytogenetic technique that uses fluorescent
probes to detect the presence of small, submicroscopic
chromosomal changes that are beyond the resolution of
karyotype analysis.
9. Chromosomal abnormalities
NUMERICAL
Aneuploidy is a disorder of
chromosomal number
No of chroms in a cell is not
in multiple of 23
Mc clinically significant type
of chromosome abnormality
Mc cause is non disjunction
STRUCTURAL
Deletions
Duplications
Translocations
Inversions
Insertions
Ring chromosomes
10. Aneuploidy
Autosomal aneuploidy
Mc aneuploidy in live born
children
Downs syndrome(trisomy21)
Edward
syndrome(trisomy18)
Patau syndrome(trisomy13)
Others are trisomy 16,9,8,
tetrasomy 12p
Sex chromosome aneuploidy
Klienefelter syndrome
Tuners syndrome
Others are xyy male,
trisomy x,xy female
11. Downs syndrome(trisomy21)
Down syndrome was the 1st chromosome aberration to be
discovered in humans by the physician John Langdon Down
in 1886.
It affects about 1 in 800 live births
Mc cause is non disjunction of maternal chromosome -
95%,translocation of the long arm of chromosome 21 to
usually chromosome14 or 15-4%(familial downs),mosaic
downs1%
the risk of having a baby with Down syndrome increases
with maternal age
12. Screening tests:
In 1st trimester: PAPP-A(pregnancy assc plasma protein),beta
HCG, Nuchal translucency
In second trimester: QUAD TEST with AFP, estriol, HCG,
inhibin A (80%)
Most affected individuals are mildly to moderately mentally
retarded, have congenital heart defects, and a high risk of
acute leukemia. They are usually short, have a broad, short
skull, and possess hyper flexible joints, intellectual disability,
females may reproduce but not males.
Life expectancy is 17 years, however, 8% make it upto 4o
years.
14. Edwards syndrome(trisomy18)
Edwards syndrome affects 1 in 10 thousand live births
Most affected fetuses fail to survive to birth. Those that survive are
usually female, with 80–90% mortality by 2 years of age
16. Other rare autosomal aneuploidies are
Trisomy 8
Karyotype 47XX/XY,+8
characterised by growth deficiency , intellectual disability,
and deep palmar and plantar furrows
Trisomy 9
karyotype 47XX/XY+9
characterised by craniofacial, skeletal malformations and
heart defects
Trisomy 16
M/C observed autosomal aneuploidy in spontaneous abortions
17. Tetrasomy 12p
Karyotype 46XX+[12]
Its known as pallister killian syndrome
characterised by sparse anterior scalp hair,
eyelashes, prominent forehead, polydactyly
and streaks of hyperpigmentation and
hypopigmentation patches
18. Klinefelter syndrome(47xxy)
This is the mc sex chromosome
aneuploidy in humans
It’s the mc cause of hypogonadism and
infertility in males
prevalence is 1/580 males
Error in paternal chromosome
disjunction is the mc cause
Puberty occur at normal age but delay
in secondary sexual characters
Main Clinical presentation will be
infertility
19. Turner Syndrome(45xo)
Its monosomy of x chromosome
Birth prevalence is 1/5000 female live births
In 75% patients the lost chromosome is of paternal in origin
Turners patients have assc cardiac defects in 40%.mc defect
is nonstenotic bicuspid aortic valve ,other are coarctation of
aorta,AS,MVP
Renal malformations like horse shoe kidney,pelvic kidney
Turners pt with mosaicism having y chromosome should
under go prophylactic gonadectomy because of high risk of
gonadoblastoma
21. Other sex chromosome aneuploidies are
47XYY syndrome
karyotype is 47XYY
they have normal intelligence with increased risk of
learning disabilities ,and hyperactive behaviour,
Earlier reports that assign stigmata of criminality to this
disorder has been disproved
22. Structural abnormalities
The structure of chromosome is alter here
Deletions: A portion of the chromosome is missing or
deleted.
23. example;
wolf hirshhorn syndrome
Its caused by partial deletion of p arm chromosome 4
c/f ;greek helmet facies ,hypertelorism,
Frontal bossing, microcephaly,
down turned corners of mouth
Beaked nose with prominent ridges
24. Duplications: A portion of the chromosome is duplicated,
resulting in extra genetic material.
25. example;
Charcot-Marie-Tooth disease
type 1A which may be caused by
duplication of the gene encoding
peripheral myelin protein 22 (PMP22)
on chromosome 17
The neuropathy of CMT affects
both motor and sensory nerves.
Motor nerves cause muscles to contract
26. Contiguous gene syndrome:
it is characterised by microdeletions
and microduplication involving many genes
so that the affected individual have a
distinct phenotype based on genes
involved
ex; Williams syndrome
27. Williams syndrome
Microdeletions in 7q11.23
It has distinct ‘elfin facies’
stellate pattern in irish ,
intellectual disability,
supravalvular aortic stenosis
other cvs problems
28. Translocations: A portion of one chromosome is
transferred to another chromosome.
There are mainly of two types of translocations:
• Reciprocal translocation
• Robertsonian translocation
29. • Reciprocal translocation :
Segments from two different chromosomes have been
exchanged.
Carriers are phenotypically normal but are increased risk of
miscarriages
30. • Robertsonian translocation:
Mc structural chromosome abnormality in humans
With a Frequency of 1/1000
These occur with acrocentric chromosomes 13, 14, 15, 21 and
22.
They are named after the American biologist William Rees
Robertson who described it first in grasshopper
The two chromosomes break at their centromeres and the long
arms fuse to form a single chromosome with a single centromere.
Carriers of robertsonian translocations are phenotypically N but
increased risk of miscarriage and unbalanced abnormal offsprings
31. Inversions: A portion of the chromosome has broken off,
turned upside down and reattached, therefore the genetic
material is inverted and sequence is disturbed.
Carriers may phenotypically normal but increased risk of
miscarriages
32. Insertions: A portion of one chromosome has been deleted
from its normal place and inserted into another chromosome.
33. Rings: A portion of a chromosome has broken off and formed a
circle or ring. This can happen with or without loss of genetic
material
Person with ring chromosome may appear normal or near normal
or can have intellectual disability
34. Chromosome instability syndromes are a group of
disorders characterized by chromosomal instability and
breakage.
They often have increased tendency to develop certain
types of malignancies
35. Most chromosome abnormalities occur as an accident in
the egg or sperm, and therefore the anomaly is present in
every cell of the body.
Some anomalies, however, can happen after conception,
resulting in Mosaicism (where some cells have the
anomaly and some do not).