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PRECLINICAL DEVELOPMENT
Processes & Timelines & Acceptance
Global R&D: Pharma & CRO
By: Dr. Neyens Elizabeth, DVM, DABT, Pathologist
Certified in Digital Pathology by NSH/DPA
OBJECTIVES:
UPON COMPLETION OF THIS SESSION
PARTICIPANTS WILL BE RESPONSIBLE TO:
1. Identify the main regulatory authorities responsible for new
drug developments
2. Understanding the importance of a GLP environment
3. Concept of preclinical research and its stakeholders
4. Able to discuss with pathologist about SEND and
INHAND
5. Understanding the number of slides and tissues in safety
studies
6. Histology & Histopathology
7. Image analysis versus Histopathology
8. What are Animal Models
Food & Drug Administration
- 21 CFR Part 11 section of the Code of
Federal Regulations
- Introduced in 1997
- Apply to records in electronic form that are
created, modified, maintained, archived,
retrieved, or transmitted, under any records
requirements set forth in agency regulations
- Provide criteria under which the agency
determines the reliability of electronic
records, electronic signatures, and
handwritten signatures that are executed to
electronic records
ü Thalidomide scandal
ü Early’s ‘70, FDA discovered poor
laboratory practices whole over the
US
ü Invalid equipment, results, reports
Applies to Non-Clinical Studies
TRACIBILITY
FDA
Efficacy & Safety
ü Efficacy is tested in Proof of Concept
studies
ü Safety of the drug or medical device is
tested in safety & toxicity studies
ü Small molecules & Biologics
ü Extra category: Medical Devices
DRUG
DEVELOPMENT
PIPELINE
Pre-Clinical RESEARCH
Locations & Species:
1. Contract research organizations
2. Pharmaceutical Industry
3. Academia – Research Centers
Macroscopic Changes:
1. Necropsy procedures
2. Repetitive tasks
3. Technicians & Pathologists
Microscopic Changes:
1. Protocol-driven tissues
2. Repetitive tasks
3. Normal vs. Pathology
4. Peer-Reviews !
Preclinical non-GLP
• Although it’s non-GLP, often studies are conducted within the GLP-manner
• Try not to focus, we need to do it GLP
• Non-GLP studies are as important as the GLP ones
• Many advantages in the non-GLP studies:
• Pathologists may be too expensive for non-GLP
• Pathologists prefer to read within GLP context
• Pathologists in pharmaceutical industry read (often) non-GLP
• non-GLP needs to be accurate and performant
• GLP studies will rely on the non-GLP data
Types of
Toxicity-
Safety Studies
• Animal Species:
• Rodents: rats & mice
• Rabbits (guinea pigs)
• Dogs, Minipigs & NHP
• Oral or Gavage studies
• Inhalation Studies: focus
respiratory tract
• Infusion studies: single or
multiple site
• Neurological Studies
• Dermal Studies & topical
applications
• Ocular Studies &
specialized pathology
• Reproduction &
developmental studies
STUDY
PROTOCOL
LIST OF ORGANS & TISSUES
STUDY PROTOCOL
Pathology Section: experimental design, macroscopic, microscopic Changes
INHAND & SEND TERMINOLOGIES
• The INHAND Proposal (International Harmonization of Nomenclature and Diagnostic Criteria for
Lesions in Rats and Mice) has been operational since 2005.
• Organ Working Groups (OWG), drawing upon experts from North America, Europe and Japan
• Great progress has been made with 9 systems published to date
• www.goreni.org
• INHAND nomenclature guides offer diagnostic criteria and guidelines for recording lesions observed in
rodent toxicity and carcinogenicity studies.
• During 2012, incorporation of INHAND terminology as preferred terminology for SEND (Standard for
Exchange of Nonclinical Data) submissions to the FDA.
• The interest in utilizing the INHAND nomenclature, based on input from industry and government
toxicologists as well as information technology specialists, suggests that there will be wide acceptance of
this nomenclature.
Maximum
Tolerated
Dose
Escalating
Dose
When the first dose level needs
to be established NOAEL,
dosing regimes are increased in a
MTD study. Animals will be
monitored & necropsied in order
to find the maximum tolerated
dose level of the new drug
Cause of death & necropsies are
prioritized
Small species & large species are
used
Histopathology is limited on
target organs such as liver, brain,
spleen, lungs, heart
Often these studies are non-GLP
The number of animals are
limited to approximately
10/Group
Total tissue to be examined by
pathologist: 50 tissues of target
organs to be screen for
abnormalities
Often these studies are lacking
normal animals
Single dose
vs. Repeat
dose
This is the second step
in the establishment of a
safety profile of the new
drug
Necropsies are
prioritized BUT with
advanced
histopathological
evaluations
Cause of Death are not
welcome !
Small species & large
species are used
Histopathology is has an
extensive organ and
tissue list according to
the protocol (guidelines)
Often these studies are
moving to GLP-status
The number of animal
groups is often up to 4
(control, low – mid –
high dose)
The number of animals
= group varies from 10
females + 10 males
Control animals are
mandatory for these
studies
Total tissue to be
examined by pathologist:
xx tissues of target
organs to be screen for
abnormalities
Each tissue can go up till
10 different diagnosis
(sometimes nihil)
Recovery animals are
often included in this
type of study
Pre-Clinical GLP
Organization needs
to be controlled by
authorities & GLP
approved
Needs to follow 21
CFR Part 11
Needs to have
Standard Operating
Procedures in place
Study Protocol
needs to mention
GLP Compliance
Quality Assurance
Team
Internal Audit &
External FDA –
OECD inspections
Sub-
chronic &
Chronic
Duration from 3-months up
to 6-months Small & large species
Often conducted GLP-status
Main animals from at least 3
dose levels and control +
Recovery animals from high
doses (all dose levels)
Extensive tissue list with at
least 25 organs/tissues to
evaluate (trimming protocols)
Number of animals/group
varies from 10
animals/group/sex up to 20
animals
Control animals are
mandatory
Tissue list can be extended
within special
administrations studies
•Inhalation studies with respiratory tract
•Infusion studies with injection sites
•Implant studies
Carcinogenicity
studies
• This is the one of the final safety studies in the establishment of a safety
profile of the new drug
• Complex histopathological evaluations because there is the risk of drift of
the pathologist
• Only Small species are used, which are treated during 2-years
• The purpose of the carcinogenicity study is the identify an increased
amount of a type of tumor following the administration of the test item
• Cause of Death are requested in order to validate such a long term study
• Histopathology is has an extensive organ and tissue list according to the
protocol (guidelines) + a lot of abnormalities !
• These studies are always GLP-status
• The number of animal groups is often up to 4 (control, low – mid –high
dose)
• The number of animals = group varies from 40 females + 40 males
• Control animals are mandatory for these studies
• Total tissues (min) to be examined by pathologist: xx tissues of target
organs to be screen for abnormalities
• Each tissue can go up till 10 different diagnosis (sometimes nihil)
Special Safety Studies
• Route of administration needs
to mimic the route of
administration in human for its
intended use
• INHALATION STUDIES
• Specific protocol driven
• Extensive respiratory tract
organs & tissues to be
trimmed & evaluated
• Serial sections
• Nasal cavity
• Larynx
• Pharynx
• Trachea & Lungs
Inhalation Studies
Reproduction studies (1)
• Male Reproductive tract
• Mandatory to confirm absence of infertility
• Mature laboratory animals: Rats
• Immature & Mature laboratory animals: Non
Human Primates & Dogs
• Screening exercise for Normal spermatogenic
stages
• Diagnostic exercise for Infertility & Pathology
(reversible – irreversible)
Reproduction studies (2)
• Female Reproductive tract
• Mandatory to confirm absence of infertility
• Mature laboratory animals: Rats & Rabbits
• Immature & Mature laboratory animals: Non
Human Primates & Dogs
• Screening exercise for Normal Cycle (vagina &
ovaria)
• Diagnostic exercise for Infertility & Pathology
(reversible – irreversible)
IND
• Pharmacology – Pharmacokinetics
• Toxicology – Pathology
• Small & Large animal species
• Single Dose, Maximum Tolerated Dose
• Repeat Dose Toxicity
• Genotoxicity
• Reproductive & Developmental Toxicity
• Carcinogenicity Toxicity
• Special Toxicology & Pathology
HISTOPATHOLOGY
VS. IMAGE ANALYSIS
PART 2 : IMAGE
ANALYSIS
• IMAGE ANALYSIS via microscope =performed as
early as 17th century
• DIGITAL IMAGE ANALYSIS = extracting
meaningful information from a digital image via
processing techniques
• Extracting quantitative information from a
digitized histology slide via computer processing
• FDA-approved algorithms for IHC analysis
(Oncology) as aids to pathologists
Applications: Image
Analysis
ü Study protocols
ü Objectives
ü Material & Methods
ü Sampling & Tissues
ü Histopathology
ü Primary readings
ü Peer-Review
ü Reporting
ü Archiving
ü GLP /non-GLP
ü Conclusions
PART 3 : Proof of
Concept
• Non-GLP environment
• Proof of efficacy – Toxicity is not evaluated
• Typical Animal Models
• Research Institutes, Commercial Biotechnologies, CRO’s – Less
in Pharmaceutical Industy
• Mimicking Human Pathologies
• Typical Jackson Laboratory Catalogue

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Introduction to Preclinical Toxicological Pathology

  • 1. PRECLINICAL DEVELOPMENT Processes & Timelines & Acceptance Global R&D: Pharma & CRO By: Dr. Neyens Elizabeth, DVM, DABT, Pathologist Certified in Digital Pathology by NSH/DPA
  • 2. OBJECTIVES: UPON COMPLETION OF THIS SESSION PARTICIPANTS WILL BE RESPONSIBLE TO: 1. Identify the main regulatory authorities responsible for new drug developments 2. Understanding the importance of a GLP environment 3. Concept of preclinical research and its stakeholders 4. Able to discuss with pathologist about SEND and INHAND 5. Understanding the number of slides and tissues in safety studies 6. Histology & Histopathology 7. Image analysis versus Histopathology 8. What are Animal Models
  • 3. Food & Drug Administration - 21 CFR Part 11 section of the Code of Federal Regulations - Introduced in 1997 - Apply to records in electronic form that are created, modified, maintained, archived, retrieved, or transmitted, under any records requirements set forth in agency regulations - Provide criteria under which the agency determines the reliability of electronic records, electronic signatures, and handwritten signatures that are executed to electronic records
  • 4. ü Thalidomide scandal ü Early’s ‘70, FDA discovered poor laboratory practices whole over the US ü Invalid equipment, results, reports Applies to Non-Clinical Studies TRACIBILITY
  • 5. FDA Efficacy & Safety ü Efficacy is tested in Proof of Concept studies ü Safety of the drug or medical device is tested in safety & toxicity studies ü Small molecules & Biologics ü Extra category: Medical Devices
  • 7. Pre-Clinical RESEARCH Locations & Species: 1. Contract research organizations 2. Pharmaceutical Industry 3. Academia – Research Centers Macroscopic Changes: 1. Necropsy procedures 2. Repetitive tasks 3. Technicians & Pathologists Microscopic Changes: 1. Protocol-driven tissues 2. Repetitive tasks 3. Normal vs. Pathology 4. Peer-Reviews !
  • 8. Preclinical non-GLP • Although it’s non-GLP, often studies are conducted within the GLP-manner • Try not to focus, we need to do it GLP • Non-GLP studies are as important as the GLP ones • Many advantages in the non-GLP studies: • Pathologists may be too expensive for non-GLP • Pathologists prefer to read within GLP context • Pathologists in pharmaceutical industry read (often) non-GLP • non-GLP needs to be accurate and performant • GLP studies will rely on the non-GLP data
  • 9. Types of Toxicity- Safety Studies • Animal Species: • Rodents: rats & mice • Rabbits (guinea pigs) • Dogs, Minipigs & NHP • Oral or Gavage studies • Inhalation Studies: focus respiratory tract • Infusion studies: single or multiple site • Neurological Studies • Dermal Studies & topical applications • Ocular Studies & specialized pathology • Reproduction & developmental studies
  • 11. STUDY PROTOCOL Pathology Section: experimental design, macroscopic, microscopic Changes
  • 12. INHAND & SEND TERMINOLOGIES • The INHAND Proposal (International Harmonization of Nomenclature and Diagnostic Criteria for Lesions in Rats and Mice) has been operational since 2005. • Organ Working Groups (OWG), drawing upon experts from North America, Europe and Japan • Great progress has been made with 9 systems published to date • www.goreni.org • INHAND nomenclature guides offer diagnostic criteria and guidelines for recording lesions observed in rodent toxicity and carcinogenicity studies. • During 2012, incorporation of INHAND terminology as preferred terminology for SEND (Standard for Exchange of Nonclinical Data) submissions to the FDA. • The interest in utilizing the INHAND nomenclature, based on input from industry and government toxicologists as well as information technology specialists, suggests that there will be wide acceptance of this nomenclature.
  • 13. Maximum Tolerated Dose Escalating Dose When the first dose level needs to be established NOAEL, dosing regimes are increased in a MTD study. Animals will be monitored & necropsied in order to find the maximum tolerated dose level of the new drug Cause of death & necropsies are prioritized Small species & large species are used Histopathology is limited on target organs such as liver, brain, spleen, lungs, heart Often these studies are non-GLP The number of animals are limited to approximately 10/Group Total tissue to be examined by pathologist: 50 tissues of target organs to be screen for abnormalities Often these studies are lacking normal animals
  • 14. Single dose vs. Repeat dose This is the second step in the establishment of a safety profile of the new drug Necropsies are prioritized BUT with advanced histopathological evaluations Cause of Death are not welcome ! Small species & large species are used Histopathology is has an extensive organ and tissue list according to the protocol (guidelines) Often these studies are moving to GLP-status The number of animal groups is often up to 4 (control, low – mid – high dose) The number of animals = group varies from 10 females + 10 males Control animals are mandatory for these studies Total tissue to be examined by pathologist: xx tissues of target organs to be screen for abnormalities Each tissue can go up till 10 different diagnosis (sometimes nihil) Recovery animals are often included in this type of study
  • 15. Pre-Clinical GLP Organization needs to be controlled by authorities & GLP approved Needs to follow 21 CFR Part 11 Needs to have Standard Operating Procedures in place Study Protocol needs to mention GLP Compliance Quality Assurance Team Internal Audit & External FDA – OECD inspections
  • 16. Sub- chronic & Chronic Duration from 3-months up to 6-months Small & large species Often conducted GLP-status Main animals from at least 3 dose levels and control + Recovery animals from high doses (all dose levels) Extensive tissue list with at least 25 organs/tissues to evaluate (trimming protocols) Number of animals/group varies from 10 animals/group/sex up to 20 animals Control animals are mandatory Tissue list can be extended within special administrations studies •Inhalation studies with respiratory tract •Infusion studies with injection sites •Implant studies
  • 17. Carcinogenicity studies • This is the one of the final safety studies in the establishment of a safety profile of the new drug • Complex histopathological evaluations because there is the risk of drift of the pathologist • Only Small species are used, which are treated during 2-years • The purpose of the carcinogenicity study is the identify an increased amount of a type of tumor following the administration of the test item • Cause of Death are requested in order to validate such a long term study • Histopathology is has an extensive organ and tissue list according to the protocol (guidelines) + a lot of abnormalities ! • These studies are always GLP-status • The number of animal groups is often up to 4 (control, low – mid –high dose) • The number of animals = group varies from 40 females + 40 males • Control animals are mandatory for these studies • Total tissues (min) to be examined by pathologist: xx tissues of target organs to be screen for abnormalities • Each tissue can go up till 10 different diagnosis (sometimes nihil)
  • 18. Special Safety Studies • Route of administration needs to mimic the route of administration in human for its intended use • INHALATION STUDIES • Specific protocol driven • Extensive respiratory tract organs & tissues to be trimmed & evaluated • Serial sections • Nasal cavity • Larynx • Pharynx • Trachea & Lungs
  • 20. Reproduction studies (1) • Male Reproductive tract • Mandatory to confirm absence of infertility • Mature laboratory animals: Rats • Immature & Mature laboratory animals: Non Human Primates & Dogs • Screening exercise for Normal spermatogenic stages • Diagnostic exercise for Infertility & Pathology (reversible – irreversible)
  • 21. Reproduction studies (2) • Female Reproductive tract • Mandatory to confirm absence of infertility • Mature laboratory animals: Rats & Rabbits • Immature & Mature laboratory animals: Non Human Primates & Dogs • Screening exercise for Normal Cycle (vagina & ovaria) • Diagnostic exercise for Infertility & Pathology (reversible – irreversible)
  • 22. IND • Pharmacology – Pharmacokinetics • Toxicology – Pathology • Small & Large animal species • Single Dose, Maximum Tolerated Dose • Repeat Dose Toxicity • Genotoxicity • Reproductive & Developmental Toxicity • Carcinogenicity Toxicity • Special Toxicology & Pathology
  • 24. PART 2 : IMAGE ANALYSIS • IMAGE ANALYSIS via microscope =performed as early as 17th century • DIGITAL IMAGE ANALYSIS = extracting meaningful information from a digital image via processing techniques • Extracting quantitative information from a digitized histology slide via computer processing • FDA-approved algorithms for IHC analysis (Oncology) as aids to pathologists
  • 26. ü Study protocols ü Objectives ü Material & Methods ü Sampling & Tissues ü Histopathology ü Primary readings ü Peer-Review ü Reporting ü Archiving ü GLP /non-GLP ü Conclusions
  • 27. PART 3 : Proof of Concept • Non-GLP environment • Proof of efficacy – Toxicity is not evaluated • Typical Animal Models • Research Institutes, Commercial Biotechnologies, CRO’s – Less in Pharmaceutical Industy • Mimicking Human Pathologies • Typical Jackson Laboratory Catalogue