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MICROBIOLOGY
Dr. Faiza Munir Ch
Medical Officer (lecturer)
dr.faizamunirch@gmail.com
INTRODUCTION TO
MICROBIOLOGY
Objective:
At the end of lecture student can:
• Define Microbiology
• Explain the importance of microbiology in nursing practice.
• Explain Binomial Nomenclature
• List contribution of the following scientist in the field of
microbiology
– A. V. Leeunvenhork
– F. Redi
– L. Pasteur
– R. Koch
• Distinguish between eukaryotic and prokaryotic cell.
• List some basic properties of virus.
• List basic nutritional requirements of mircroorganisms.
• Classify bacteria on the bases of their nutritional
requirement and morphology.
What is MICROBIOLOGY??
• Very small to be seen
by naked eye
MICRO
• Life
BIO
• Science/ branch
LOGY
So Why We Study Microbiology?
Infectious Diseases are responsible for
Significant Mortality and Morbidity
Worldwide
In the Developed World about 1/3rd of all admitted patients
are those suffering from an infection.
DEFINATION:
Microbiology:
Is the science that deals with the study of micro-organisms (too small to be
seen by naked eye) their activities and their influences on different aspects
of life.
The organisms are widely distributed in nature.
Some of them are beneficial to man and some are harmful.
Medical microbiology deals with microbes that are harmful to man.
Methods of study of Microorganism
• Light microscopy :
• Immersion microscopy
• Dark-field microscopy
• Phase-contrast microscopy
• Electron microscopy
• Luminescent microscopy
The agents of human infections belong to
Microbes
Bacteria
Viruses
Fungi
Parasites
Ø Bacteriology:
Ø Virology:
Ø Mycology:
Ø Parasitology:
is the science studying bacteria.
is the science studying viruses.
is the science studying fungi.
is the science studying parasites.
q Why is microbiology
important in nursing?
19
 Everyday nurses’ encounter with microbial world while
working in medical health care settings.
 To prevent spread of infection
 To maintain sterilefield
 To collect specimens
 To implement immunization schedule in
hospitals
20
• Nurses are involved in controlling infection in hospital, so
nurses must know about microbiology.
• To know about harmful and harmless microorganisms to
human being.
• Nurses apply the microbiology knowledge in health care
for drug production, diagnosis and sterilization methods
and cleanliness.
• Nurses use hot water or anti-septic as a measure to
sterilize the surgical knives, needles, scissors and
other metals instruments
• Microbiology also gives knowledge to nurses on how to
handle a p a t i e n t a n d his samples infected with
communicable diseases to free from microbes.
21
How do we name Microorganism?
BINOMIAL SYSTEM
Binomial System
Bi: Means 2
Nomial: Means name
1. Name of Genus
2. Name of Species e.g.
• Staphylococcus aureus
–Staphylococcus (genus)
–aureus (species)
• Escherichia coli ????
History
DISCOVERY ERA:
“Spontaneous generation”
• Aristotle (322-384) and others believed that living
organisms could develop from non-living materials.
• Examples:
• Meat produces maggots
• Mud produces fishes
• Grain produces mice
DISCOVERY ERA
Antony van Leeuwenhoek
1632 – 1723 was a Dutch businessman
and scientist. A largely self-taught man
in science.
He is known as "the Father of
Microbiology", and one of the first
microscopists and microbiologists
Inventor of the first microscope
• Leeuwenhoek earned his living as a
draper, but spent much of his spare
time constructing simple microscopes
composed of double convex glass
lenses held between two silver plates.
• His microscope could magnify around
50 to 300
• times.
• Described live microorganisms in
teeth scrapings, rain water, and
peppercorn infusions.
TRANSITION ERA:
Francesco Redi
(1626 - 1697)He showed that maggots would not arise from
decaying meat, when it is covered.
Despite the proof that maggots did not arise spontaneously,
some scientist still believed in spontaneous generation.
GOLDEN ERA:
Louis Pasteur
• He is the father of Medical Microbiology.
• He pointed that no growth took place in swan neck
shaped tubes because dust and germs had been
trapped on the walls of the curved necks but if the
necks were broken off so that dust fell directly down
into the flask, microbial growth commenced
immediately.
• Pasteur in 1897 suggested that mild heating at
62.8°C (145°F) for 30 minutes rather than boiling
was enough to destroy the undesirable organisms
without ruining the taste of the product, the process
was called Pasteurization.
Pasteur’s experiment for the competition involved his famous
“swannecked” flasks
Contributions of Loius pasteur:
• He coined the term “microbiology”, aerobic, anaerobic.
• He disproved the theory of spontaneous germination.
• He demonstrated that anthrax was caused by bacteria and also
produced the vaccine for the disease.
• He developed live attenuated vaccine for the disease.
• He invented the processes of pasteurization, fermentation and the
development of effective vaccines ( rabies and anthrax).
• Pasteur demonstrated diseases of silkworm was due to a
protozoan parasite.
Germ Theory of Disease:
KOCH’S CONTRIBUTIONS
• Koch developed four
postulates that aided in the
definitive establishment of
the germ theory of disease.
• Based upon cell characteristics, living organisms
are recognized as having
✓ Eukaryotic
✓ Prokaryotic cell type
Prokaryotes
• They are small cells.
• Don’t have a true nucleus
• Have a single chromosome
• (DNA).
• Have no nuclear membrane.
• Have a small ribosomes (70S).
• Reproduce by binary fission.
• Have a rigid cell wall
containing peptidoglycan.
Eukaryotes
• Have a true nucleus with a
nucleolus surrounded by a
nuclear membrane.
• Contain organelles, such as
mitochondria and lysomsomes.
• Have multiple chromosomes.
• Cell division is by mitosis or
meiosis.
• Ribosomes are large (80S).
Bacteria
• They are small and simple Prokaryotes
• Their genetic material is a single naked
chromosome without nuclear
membrane.Surrounded by a rigid cell
wall.
• They contain 70S ribosomes but no
organelles, and replicate by binary
fission.
Parasites
Are eukaryotics.Either unicellular (protozoa)
or multicellular helminths(worms)
Fungi:
• Are eukaryotic cells with a complex
cell wall (chitin).
• Their cell membrane contains sterol.
• Have chromosomes which are
enclosed by a nuclear membrane and
the cell contains ribosomes and
mitochondria.
• Exists as yeast, mold or both.
• Reproduce typically by asexual and
sexual mechanisms.
Prion
• The word prion derives from"proteinaceous
infectious particle
• Prions are misfolded proteins ( small protein
particle) with the ability to transmit their
misfoldedshape onto normal variants of the
same protein.
• They characterize several fatal and
transmissible neurodegenerative diseases in
humans and many other animals
Viruses
• Are not cells and not visible
with the light microscope.
• Replicate only in living cells.
• Contain NO organelles.
• Contain either DNA or RNA
surrounded by a protein coat.
Nutritional Requirement of
Microorganisms:
Nutrients are substances used in biosynthesis
and energy release and therefore are required for
microbial growth
Dr. Faiza Munir Ch
Medical Officer
MINAS
Classification of bacteria:
Bacteria can be classified in many ways. The first classification scheme was
published in 1773 and many more have appeared since.
• Science of microbiology has developed other kind of classification but
medically important classification are as follow:
➢Morphological
➢ Anatomical
➢ Staining
➢ Cultural characteristics
➢ Nutrition
➢ Environmental factors
➢ Biochemical reactions
➢ Antigenic structure
Shapes of Bacteria
There are 3 Basic Shapes:
• Round
• Elongated
• Spiral
Round:
Bacilli or Rods:
Spirochetes:
Morphological classification:
1. TRUE BACTERIA
• Cocci – Spherical or oval cells.
➢ Monococci (Cocci in singles)
➢ Diplococci (Cocci in pairs)
➢ Staphylococci (Cocci in grape
like clusters)
➢ Streptococci (Cocci in chains)
➢ Tetrad (Cocci in group of four)
➢ Sarcina (Cocci in group of eight)
• Bacilli – Rod-shaped
bacteria
➢ Diplobacilli.
➢ Streptobacilli
➢ Chinese-letter form
➢ Coccobacilli
➢ Comma-shaped
2. ACTIINOMYCETES
(actin- ray, mykes-fungus)
• These are rigid organisms like
true bacteria but they
resemble fungi in that they
exhibit branching and tend to
form filaments.
• They are termed such
because of their resemblance
to sun rays when seen in
tissue sections.
3. Spirochetes
• These are relatively longer,
slender, non branched
• microorganisms of spiral
shape having several coils
4. Mycoplasma
• These bacteria lack in rigid cell
wall (cell wall lacking) and are
highly pleomorphic and of
indefinite shape.
5. Rickettsia and
Chlamydia
These are very small, obligate,
Intracellular parasites.
Based on Anatomical features
• Capsule
ØCapsulate – Streptococcus
pneumoniae
ØNon-capsulate – Viridans
streptococci
• Flagella
ØFlagellate
• Monotrichous
• Lophotrichous
• Amphitrichous
• Peritrichous
Ø A flagellate
• Atrichous
• Spore
• Spore-forming – Bacillus
spp.
• Non-sporing – Escherichia
coli
Based on Staining reaction:
• GRAM’S STAIN
➢ Gram-positive cocci
➢ Gram-negative cocci
➢ Gram-positive rods
➢ Gram-negative rods
• ACID FAST STAIN
➢ Acid-fast bacilli
Based on environmental factors:
• Temperature
• Oxygen dependence
• pH
• Salt concentration
• Atmospheric pressure
Temperature
• Psychrophiles: Grow well at zero or below 7C (15-25)
–Pseudomonas fluorescens
• Mesophiles (20-45C) – Escherichia coli, Salmonella enterica,
Staphylococcus aureus
• Thermophiles Grow well above 45C- Bacillus stearothermophilus
• Extremely thermophiles (as high as 70C) Optimum(80-
• 90) Thermus aquatus, Thermococcus spp
Oxygen dependence
• Aerobe (grow in ambient temperature, which contains 21% O2
and a small amount of CO2, 0.03%) (Neisseria)
• Obligate aerobes – Strictly require O2 for their growth
(Pseudomonas aeruginosa)
• Microaerophilic (grow under reduced O2, 5-10% and increased
CO2, 8-10%)- Campylobacter jejuni, Helicobacter pylori
Oxygen dependence
• Facultative anaerobe (capable of growing either in
presence or absence of O2)- E. coli
• Obligate anaerobe – Clostridium spp.
• Capnophilic (require increased concentration of CO2, i.e.,
5-10%) – H. influenzae,N.gonorrhoeae
pH
• Acidophiles: pH: >6
(Lactobacillus acidophilus)
• Alkaliphiles: pH: <8
(Vibrio)
• Neutralophiles: (pH 6-8)
• Majority of the medically
important bacteria grow
best at neutral or slightly
alkaline reaction (pH 7.2-
7.6)
Salt concentration
• Halophiles
• Non-halophiles
Other ways of classification
▪ Motile/Non-motile
▪ Pathogenic/Non-pathogenic
▪ Sensitive/Resistant (to particular antibiotic/ chemicals)
▪ Lactose fermenter/Lactose non-fermenter
▪ Hemolytic/ Non Hemolytic
Assignment: Total Marks=40
1. Define Microbiology and explain the importance of microbiology in nursing practice. (5)
2. List contribution of the following scientist in the field of microbiology
1. A. V. Leeunvenhork (2.5)
2. F. Redi (2.5)
3. L. Pasteur (5)
4. R. Koch (5)
3. Distinguish between eukaryotic and prokaryotic cell. (5)
4. List some basic properties of virus. (5)
5. List basic nutritional requirements of mircroorganisms. (5)
6. Classify bacteria on the bases of their nutritional requirement and morphology. (5)
Dr. Faiza Munir Ch
Medical Officer
MINAS

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Unit 1 Introduction to Microbiology BSN new.pdf

  • 1. MICROBIOLOGY Dr. Faiza Munir Ch Medical Officer (lecturer) dr.faizamunirch@gmail.com
  • 3. Objective: At the end of lecture student can: • Define Microbiology • Explain the importance of microbiology in nursing practice. • Explain Binomial Nomenclature • List contribution of the following scientist in the field of microbiology – A. V. Leeunvenhork – F. Redi – L. Pasteur – R. Koch
  • 4. • Distinguish between eukaryotic and prokaryotic cell. • List some basic properties of virus. • List basic nutritional requirements of mircroorganisms. • Classify bacteria on the bases of their nutritional requirement and morphology.
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  • 10. • Very small to be seen by naked eye MICRO • Life BIO • Science/ branch LOGY
  • 11. So Why We Study Microbiology?
  • 12. Infectious Diseases are responsible for Significant Mortality and Morbidity Worldwide In the Developed World about 1/3rd of all admitted patients are those suffering from an infection.
  • 13. DEFINATION: Microbiology: Is the science that deals with the study of micro-organisms (too small to be seen by naked eye) their activities and their influences on different aspects of life.
  • 14. The organisms are widely distributed in nature. Some of them are beneficial to man and some are harmful. Medical microbiology deals with microbes that are harmful to man.
  • 15.
  • 16. Methods of study of Microorganism • Light microscopy : • Immersion microscopy • Dark-field microscopy • Phase-contrast microscopy • Electron microscopy • Luminescent microscopy
  • 17. The agents of human infections belong to Microbes Bacteria Viruses Fungi Parasites
  • 18. Ø Bacteriology: Ø Virology: Ø Mycology: Ø Parasitology: is the science studying bacteria. is the science studying viruses. is the science studying fungi. is the science studying parasites.
  • 19. q Why is microbiology important in nursing? 19
  • 20.  Everyday nurses’ encounter with microbial world while working in medical health care settings.  To prevent spread of infection  To maintain sterilefield  To collect specimens  To implement immunization schedule in hospitals 20
  • 21. • Nurses are involved in controlling infection in hospital, so nurses must know about microbiology. • To know about harmful and harmless microorganisms to human being. • Nurses apply the microbiology knowledge in health care for drug production, diagnosis and sterilization methods and cleanliness. • Nurses use hot water or anti-septic as a measure to sterilize the surgical knives, needles, scissors and other metals instruments • Microbiology also gives knowledge to nurses on how to handle a p a t i e n t a n d his samples infected with communicable diseases to free from microbes. 21
  • 22. How do we name Microorganism?
  • 24. Binomial System Bi: Means 2 Nomial: Means name 1. Name of Genus 2. Name of Species e.g.
  • 25. • Staphylococcus aureus –Staphylococcus (genus) –aureus (species) • Escherichia coli ????
  • 27. DISCOVERY ERA: “Spontaneous generation” • Aristotle (322-384) and others believed that living organisms could develop from non-living materials. • Examples: • Meat produces maggots • Mud produces fishes • Grain produces mice
  • 28. DISCOVERY ERA Antony van Leeuwenhoek 1632 – 1723 was a Dutch businessman and scientist. A largely self-taught man in science. He is known as "the Father of Microbiology", and one of the first microscopists and microbiologists Inventor of the first microscope
  • 29. • Leeuwenhoek earned his living as a draper, but spent much of his spare time constructing simple microscopes composed of double convex glass lenses held between two silver plates. • His microscope could magnify around 50 to 300 • times. • Described live microorganisms in teeth scrapings, rain water, and peppercorn infusions.
  • 30. TRANSITION ERA: Francesco Redi (1626 - 1697)He showed that maggots would not arise from decaying meat, when it is covered.
  • 31. Despite the proof that maggots did not arise spontaneously, some scientist still believed in spontaneous generation.
  • 32. GOLDEN ERA: Louis Pasteur • He is the father of Medical Microbiology. • He pointed that no growth took place in swan neck shaped tubes because dust and germs had been trapped on the walls of the curved necks but if the necks were broken off so that dust fell directly down into the flask, microbial growth commenced immediately. • Pasteur in 1897 suggested that mild heating at 62.8°C (145°F) for 30 minutes rather than boiling was enough to destroy the undesirable organisms without ruining the taste of the product, the process was called Pasteurization.
  • 33. Pasteur’s experiment for the competition involved his famous “swannecked” flasks
  • 34. Contributions of Loius pasteur: • He coined the term “microbiology”, aerobic, anaerobic. • He disproved the theory of spontaneous germination. • He demonstrated that anthrax was caused by bacteria and also produced the vaccine for the disease. • He developed live attenuated vaccine for the disease. • He invented the processes of pasteurization, fermentation and the development of effective vaccines ( rabies and anthrax). • Pasteur demonstrated diseases of silkworm was due to a protozoan parasite.
  • 35. Germ Theory of Disease: KOCH’S CONTRIBUTIONS • Koch developed four postulates that aided in the definitive establishment of the germ theory of disease.
  • 36.
  • 37. • Based upon cell characteristics, living organisms are recognized as having ✓ Eukaryotic ✓ Prokaryotic cell type
  • 38. Prokaryotes • They are small cells. • Don’t have a true nucleus • Have a single chromosome • (DNA). • Have no nuclear membrane. • Have a small ribosomes (70S). • Reproduce by binary fission. • Have a rigid cell wall containing peptidoglycan.
  • 39.
  • 40. Eukaryotes • Have a true nucleus with a nucleolus surrounded by a nuclear membrane. • Contain organelles, such as mitochondria and lysomsomes. • Have multiple chromosomes. • Cell division is by mitosis or meiosis. • Ribosomes are large (80S).
  • 41.
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  • 43. Bacteria • They are small and simple Prokaryotes • Their genetic material is a single naked chromosome without nuclear membrane.Surrounded by a rigid cell wall. • They contain 70S ribosomes but no organelles, and replicate by binary fission.
  • 44. Parasites Are eukaryotics.Either unicellular (protozoa) or multicellular helminths(worms)
  • 45. Fungi: • Are eukaryotic cells with a complex cell wall (chitin). • Their cell membrane contains sterol. • Have chromosomes which are enclosed by a nuclear membrane and the cell contains ribosomes and mitochondria. • Exists as yeast, mold or both. • Reproduce typically by asexual and sexual mechanisms.
  • 46. Prion • The word prion derives from"proteinaceous infectious particle • Prions are misfolded proteins ( small protein particle) with the ability to transmit their misfoldedshape onto normal variants of the same protein. • They characterize several fatal and transmissible neurodegenerative diseases in humans and many other animals
  • 47. Viruses • Are not cells and not visible with the light microscope. • Replicate only in living cells. • Contain NO organelles. • Contain either DNA or RNA surrounded by a protein coat.
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  • 57. Nutritional Requirement of Microorganisms: Nutrients are substances used in biosynthesis and energy release and therefore are required for microbial growth Dr. Faiza Munir Ch Medical Officer MINAS
  • 58.
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  • 61. Classification of bacteria: Bacteria can be classified in many ways. The first classification scheme was published in 1773 and many more have appeared since. • Science of microbiology has developed other kind of classification but medically important classification are as follow: ➢Morphological ➢ Anatomical ➢ Staining ➢ Cultural characteristics ➢ Nutrition ➢ Environmental factors ➢ Biochemical reactions ➢ Antigenic structure
  • 62. Shapes of Bacteria There are 3 Basic Shapes: • Round • Elongated • Spiral
  • 66. Morphological classification: 1. TRUE BACTERIA • Cocci – Spherical or oval cells. ➢ Monococci (Cocci in singles) ➢ Diplococci (Cocci in pairs) ➢ Staphylococci (Cocci in grape like clusters) ➢ Streptococci (Cocci in chains) ➢ Tetrad (Cocci in group of four) ➢ Sarcina (Cocci in group of eight)
  • 67. • Bacilli – Rod-shaped bacteria ➢ Diplobacilli. ➢ Streptobacilli ➢ Chinese-letter form ➢ Coccobacilli ➢ Comma-shaped
  • 68. 2. ACTIINOMYCETES (actin- ray, mykes-fungus) • These are rigid organisms like true bacteria but they resemble fungi in that they exhibit branching and tend to form filaments. • They are termed such because of their resemblance to sun rays when seen in tissue sections.
  • 69. 3. Spirochetes • These are relatively longer, slender, non branched • microorganisms of spiral shape having several coils
  • 70. 4. Mycoplasma • These bacteria lack in rigid cell wall (cell wall lacking) and are highly pleomorphic and of indefinite shape.
  • 71. 5. Rickettsia and Chlamydia These are very small, obligate, Intracellular parasites.
  • 72. Based on Anatomical features • Capsule ØCapsulate – Streptococcus pneumoniae ØNon-capsulate – Viridans streptococci
  • 73. • Flagella ØFlagellate • Monotrichous • Lophotrichous • Amphitrichous • Peritrichous Ø A flagellate • Atrichous
  • 74. • Spore • Spore-forming – Bacillus spp. • Non-sporing – Escherichia coli
  • 75. Based on Staining reaction: • GRAM’S STAIN ➢ Gram-positive cocci ➢ Gram-negative cocci ➢ Gram-positive rods ➢ Gram-negative rods • ACID FAST STAIN ➢ Acid-fast bacilli
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  • 83. Based on environmental factors: • Temperature • Oxygen dependence • pH • Salt concentration • Atmospheric pressure
  • 84. Temperature • Psychrophiles: Grow well at zero or below 7C (15-25) –Pseudomonas fluorescens • Mesophiles (20-45C) – Escherichia coli, Salmonella enterica, Staphylococcus aureus • Thermophiles Grow well above 45C- Bacillus stearothermophilus • Extremely thermophiles (as high as 70C) Optimum(80- • 90) Thermus aquatus, Thermococcus spp
  • 85. Oxygen dependence • Aerobe (grow in ambient temperature, which contains 21% O2 and a small amount of CO2, 0.03%) (Neisseria) • Obligate aerobes – Strictly require O2 for their growth (Pseudomonas aeruginosa) • Microaerophilic (grow under reduced O2, 5-10% and increased CO2, 8-10%)- Campylobacter jejuni, Helicobacter pylori
  • 86. Oxygen dependence • Facultative anaerobe (capable of growing either in presence or absence of O2)- E. coli • Obligate anaerobe – Clostridium spp. • Capnophilic (require increased concentration of CO2, i.e., 5-10%) – H. influenzae,N.gonorrhoeae
  • 87.
  • 88. pH • Acidophiles: pH: >6 (Lactobacillus acidophilus) • Alkaliphiles: pH: <8 (Vibrio) • Neutralophiles: (pH 6-8) • Majority of the medically important bacteria grow best at neutral or slightly alkaline reaction (pH 7.2- 7.6)
  • 90. Other ways of classification ▪ Motile/Non-motile ▪ Pathogenic/Non-pathogenic ▪ Sensitive/Resistant (to particular antibiotic/ chemicals) ▪ Lactose fermenter/Lactose non-fermenter ▪ Hemolytic/ Non Hemolytic
  • 91.
  • 92. Assignment: Total Marks=40 1. Define Microbiology and explain the importance of microbiology in nursing practice. (5) 2. List contribution of the following scientist in the field of microbiology 1. A. V. Leeunvenhork (2.5) 2. F. Redi (2.5) 3. L. Pasteur (5) 4. R. Koch (5) 3. Distinguish between eukaryotic and prokaryotic cell. (5) 4. List some basic properties of virus. (5) 5. List basic nutritional requirements of mircroorganisms. (5) 6. Classify bacteria on the bases of their nutritional requirement and morphology. (5)
  • 93. Dr. Faiza Munir Ch Medical Officer MINAS