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An application of Delft3D Flexible Mesh for operational water-level forecasting on the Northwest European Shelf and North Sea (DCSMv6) 
Firmijn Zijl 
NGHS Symposium, Delft Software Days 
November 5, 2014
Introduction (Acceptance testing)
NGHS acceptance testing 
Models considered for acceptance testing 
• Official RWS area schematisations for: 
•Northwest European Shelf and North Sea 
•Rhine-Meuse Entrance 
•Meuse River 
•Waal River 
November 5, 2014 
Model 
Characteristics 
Firth of Clyde 
2D, tide surge model 
Lake Grevelingen 
3D, weakly dynamic system with both temperature and salinity stratification 
Neptune (Singapore coastal waters) 
3D dynamic estuarine system with salinity and temperature stratification (and intrusion) 
Sea of Marmara 
3D, both highly and weakly dynamic parts, complex combination of salinity and temperature stratification (CIL) 
FSRU Jebel Ali 
3D, buoyant plume dispersion
Focus of this presentation 
•Development of completely redesigned new generation Dutch Continental Shelf Model version 6 (DCSMv6). 
•Originally developed using the WAQUA module of SIMONA framework, for numerical modelling of 2D free surface flows 
1) Conversion to D-Flow FM* and comparison to WAQUA 
Impact on results 
Computational time 
2) Model improvements made possible by enhanced functionality and flexibility of D-Flow FM 
E.g. spatially varying resolution to increase computational speed without loss of accuracy 
November 5, 2014 
* D-Flow FM: hydrodynamic simulation engine of Delft3D Flexible Mesh
Operational forecasting in The Netherlands 
November 5, 2014
Introduction 
The Northwest European Shelf and North Sea Need for accurate, real-time operational water level forecasting: 
•On a daily basis, it is important for port operations and to ensure maritime safety on busy shipping routes 
•For the coastal regions of the Netherlands, it is crucial, since large areas of the land lie below sea level 
•During storm surges, detailed and timely water-level forecasts provided by an operational storm surge forecasting system are necessary to support, e.g. the decision for closure of the movable storm surge barriers in the Eastern Scheldt and the Rotterdam Waterway 
November 5, 2014
Real-time forecasting in The Netherlands 
Developments in real-time flood forecasting in the Netherlands 
•Storm Surge Warning Service (SVSD), in close cooperation with the Royal Netherlands Meteorological Institute (KNMI), is responsible for operational forecasts and issuing warnings to coastal authorities in case of high water threats. 
•After the November 2006 All Saints storm it was decided that further improvements in model framework were required 
• Decision to completely redesign the operational model 
• New generation model is part of a comprehensive development to upgrade the operational forecasting system for the North Sea 
November 5, 2014
DCSMv6 model development 
November 5, 2014 
tide + surge 
surge only
Model setup 
November 5, 2014
DCSMv6 (model grid and bathymetry) 
Model setup - computational grid 
• Increased spatial coverage 
• Uniform cell size of 1.5’ (1/40°) in east-west direction and 1.0’ (1/60°) in north-south direction (~nautical mile) 
• Around 106 active grid cells Model setup – bathymetry 
• Initially based on NOOS gridded bathymetry data set, supplemented by ETOPO2 
• Changes made during calibration 
November 5, 2014
Model setup (boundary forcing) 
Model setup - boundary forcing 
• Open boundary with 205 sections 
• Distinction made between 2 components of the water level elevation: 
(1)Tide, defined in frequency domain (22 constituents) 
(2)Surge, as an inverse barometer correction (IBC) based on time and space varying pressure fields 
November 5, 2014
DCSMv6-ZUNOv4 model setup (meteo forcing) 
Model setup - meteo forcing 
• Wind speed and air pressure from HIRLAM 
model provided (operationally) by KNMI 
• Sea surface roughness is calculated using 
the Charnock relation (Charnock parameter 
0.025) 
Model setup - miscellaneous 
• Spatially varying manning bed roughness 
• Tide Generating Forces (TGF) included 
November 5, 2014
Calibration approach 
November 5, 2014
Model calibration 
Calibration and validation using tide gauge data at >120 locations 
Green dots: radar altimeter cross-over locations Red dots: in-situ tide-gauge locations 
November 5, 2014
DCSMv6 (against satelite altimeter data) 
M2 Amplitude 
M2 Phase 
November 5, 2014
DCSMv6 Model Development 
OpenDA-DUD experiment setup and parameters 
•Reduction of uncertainty in bottom friction coefficient and bathymetry 
•Multiple optimization runs, with increasing length and number of parameters 
•Final experiment (DCSMv6) 
• 200 control parameters, 12 months, ~100 observations locations 
• To achieve desired accuracy many interactions become important (in terms of processes and geographically) 
November 5, 2014
Results 
November 5, 2014
Dutch coastal stations 
RMSE 
(tide) 
RMSE (surge) 
RMSE 
(total) 
RMSE 
(high water) 
RMSE 
(low water) 
DCSMv5 
10.7 
7.7 
13.1 
11.3 
11.0 
DCSMv6 (WAQUA) 
4.1 
5.9 
7.2 
6.6 
7.1 
DCSMv6 (D-Flow FM) 
4.9 
6.0 
7.8 
6.8 
7.1 
Goodness-of-Fit (in cm) - 13 Dutch coastal stations - entire year of 2007) 
November 5, 2014
November 5, 2014 
DCSMv6 model comparison 
Red: Measurement Black: Computation Blue: Residual 
Waqua 
D-Flow FM
Tide representation in the frequency domain 
RMS(ΔA) 
RMS(ΔG) 
RMS(VD) 
Q1 
0.4 
0.4 
6.0 
8.4 
0.5 
0.6 
O1 
0.2 
0.4 
2.0 
2.0 
0.5 
0.6 
P1 
0.8 
0.7 
5.2 
5.7 
0.9 
0.8 
K1 
0.2 
0.2 
2.4 
1.6 
0.4 
0.3 
N2 
0.3 
0.4 
1.3 
2.6 
0.5 
0.8 
M2 
1.1 
2.3 
1.0 
1.5 
1.9 
3.4 
S2 
1.1 
0.6 
1.0 
1.7 
1.2 
1.0 
K2 
0.8 
0.5 
1.6 
3.6 
0.8 
0.7 
M4 
0.6 
1.0 
8.7 
12.3 
1.5 
2.3 
M6 
0.6 
0.7 
11.5 
11.2 
1.3 
1.4 
A: amplitude in cm, G: phase in °, VD: vector difference in cm 
Based on 13 Dutch coastal stations 
November 5, 2014
Tide representation in the frequency domain 
M2 amplitude and phase errors along Dutch coast 
WAQUA 
D-Flow FM 
November 5, 2014
November 5, 2014 
DCSMv6-ZUNOv4 (Dutch estuaries and Wadden Sea) 
Based on 16 stations in Dutch estuaries en Wadden Sea 
RMSE 
(tide) 
RMSE 
(surge) 
RMSE 
(total) 
DCSMv6 (WAQUA) 
7.1 
7.0 
9.9 
DCSMv6 (D-Flow FM) 
9.9 
7.1 
12.2 
Consistency in depth interpolation options is crucial to achieve similar results
Conclusions 
November 5, 2014
Computational time 
Comparison of computational time 
•Both models use a computational time step of 2 minutes (determined with convergence tests) 
•Performance tested on Deltares cluster (quad-core machines) 
•No use made of enhanced flexibility of D-Flow FM 
•Speed-up is hardware dependent 
•More effort required to improve scaling efficiency 
November 5, 2014 
number of nodes (with 4 cores each) 
comp. time [min per day] 
number of nodes (with 4 cores each) 
speed-up [-]
Summary and conclusions 
•Completely redesigned, new generation Dutch Continental Shelf Model version 6 (DCSMv6) has been developed 
• Year-long simulations show excellent agreement with (shelf-wide) measurements 
• Running the model in D-Flow FM reduces the water level representation accuracy 
•It is expected that the D-Flow FM accuracy can be improved with limited re- calibration 
• For this application D-Flow FM is twice as slow as Simona-Waqua (on one node) 
•Enhanced flexibility of D-Flow FM has not been used, but will save computational time 
•Scalability of D-Flow FM is rightly getting more attention (hardware dependent) Next step (1): make use of enhanced flexibility of D-Flow FM to reduce number of cells and increase time step by avoiding unnecessary high resolution in the deeper areas off the shelf Next step (2): Acceptance testing with different models, as results are application dependent 
November 5, 2014
DCSMv6 
Questions? 
November 5, 2014

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DSD-INT 2014 - Symposium Next Generation Hydro Software (NGHS) - North Sea, Firmijn Zijl, Deltares

  • 1. An application of Delft3D Flexible Mesh for operational water-level forecasting on the Northwest European Shelf and North Sea (DCSMv6) Firmijn Zijl NGHS Symposium, Delft Software Days November 5, 2014
  • 3. NGHS acceptance testing Models considered for acceptance testing • Official RWS area schematisations for: •Northwest European Shelf and North Sea •Rhine-Meuse Entrance •Meuse River •Waal River November 5, 2014 Model Characteristics Firth of Clyde 2D, tide surge model Lake Grevelingen 3D, weakly dynamic system with both temperature and salinity stratification Neptune (Singapore coastal waters) 3D dynamic estuarine system with salinity and temperature stratification (and intrusion) Sea of Marmara 3D, both highly and weakly dynamic parts, complex combination of salinity and temperature stratification (CIL) FSRU Jebel Ali 3D, buoyant plume dispersion
  • 4. Focus of this presentation •Development of completely redesigned new generation Dutch Continental Shelf Model version 6 (DCSMv6). •Originally developed using the WAQUA module of SIMONA framework, for numerical modelling of 2D free surface flows 1) Conversion to D-Flow FM* and comparison to WAQUA Impact on results Computational time 2) Model improvements made possible by enhanced functionality and flexibility of D-Flow FM E.g. spatially varying resolution to increase computational speed without loss of accuracy November 5, 2014 * D-Flow FM: hydrodynamic simulation engine of Delft3D Flexible Mesh
  • 5. Operational forecasting in The Netherlands November 5, 2014
  • 6. Introduction The Northwest European Shelf and North Sea Need for accurate, real-time operational water level forecasting: •On a daily basis, it is important for port operations and to ensure maritime safety on busy shipping routes •For the coastal regions of the Netherlands, it is crucial, since large areas of the land lie below sea level •During storm surges, detailed and timely water-level forecasts provided by an operational storm surge forecasting system are necessary to support, e.g. the decision for closure of the movable storm surge barriers in the Eastern Scheldt and the Rotterdam Waterway November 5, 2014
  • 7. Real-time forecasting in The Netherlands Developments in real-time flood forecasting in the Netherlands •Storm Surge Warning Service (SVSD), in close cooperation with the Royal Netherlands Meteorological Institute (KNMI), is responsible for operational forecasts and issuing warnings to coastal authorities in case of high water threats. •After the November 2006 All Saints storm it was decided that further improvements in model framework were required • Decision to completely redesign the operational model • New generation model is part of a comprehensive development to upgrade the operational forecasting system for the North Sea November 5, 2014
  • 8. DCSMv6 model development November 5, 2014 tide + surge surge only
  • 10. DCSMv6 (model grid and bathymetry) Model setup - computational grid • Increased spatial coverage • Uniform cell size of 1.5’ (1/40°) in east-west direction and 1.0’ (1/60°) in north-south direction (~nautical mile) • Around 106 active grid cells Model setup – bathymetry • Initially based on NOOS gridded bathymetry data set, supplemented by ETOPO2 • Changes made during calibration November 5, 2014
  • 11. Model setup (boundary forcing) Model setup - boundary forcing • Open boundary with 205 sections • Distinction made between 2 components of the water level elevation: (1)Tide, defined in frequency domain (22 constituents) (2)Surge, as an inverse barometer correction (IBC) based on time and space varying pressure fields November 5, 2014
  • 12. DCSMv6-ZUNOv4 model setup (meteo forcing) Model setup - meteo forcing • Wind speed and air pressure from HIRLAM model provided (operationally) by KNMI • Sea surface roughness is calculated using the Charnock relation (Charnock parameter 0.025) Model setup - miscellaneous • Spatially varying manning bed roughness • Tide Generating Forces (TGF) included November 5, 2014
  • 14. Model calibration Calibration and validation using tide gauge data at >120 locations Green dots: radar altimeter cross-over locations Red dots: in-situ tide-gauge locations November 5, 2014
  • 15. DCSMv6 (against satelite altimeter data) M2 Amplitude M2 Phase November 5, 2014
  • 16. DCSMv6 Model Development OpenDA-DUD experiment setup and parameters •Reduction of uncertainty in bottom friction coefficient and bathymetry •Multiple optimization runs, with increasing length and number of parameters •Final experiment (DCSMv6) • 200 control parameters, 12 months, ~100 observations locations • To achieve desired accuracy many interactions become important (in terms of processes and geographically) November 5, 2014
  • 18. Dutch coastal stations RMSE (tide) RMSE (surge) RMSE (total) RMSE (high water) RMSE (low water) DCSMv5 10.7 7.7 13.1 11.3 11.0 DCSMv6 (WAQUA) 4.1 5.9 7.2 6.6 7.1 DCSMv6 (D-Flow FM) 4.9 6.0 7.8 6.8 7.1 Goodness-of-Fit (in cm) - 13 Dutch coastal stations - entire year of 2007) November 5, 2014
  • 19. November 5, 2014 DCSMv6 model comparison Red: Measurement Black: Computation Blue: Residual Waqua D-Flow FM
  • 20. Tide representation in the frequency domain RMS(ΔA) RMS(ΔG) RMS(VD) Q1 0.4 0.4 6.0 8.4 0.5 0.6 O1 0.2 0.4 2.0 2.0 0.5 0.6 P1 0.8 0.7 5.2 5.7 0.9 0.8 K1 0.2 0.2 2.4 1.6 0.4 0.3 N2 0.3 0.4 1.3 2.6 0.5 0.8 M2 1.1 2.3 1.0 1.5 1.9 3.4 S2 1.1 0.6 1.0 1.7 1.2 1.0 K2 0.8 0.5 1.6 3.6 0.8 0.7 M4 0.6 1.0 8.7 12.3 1.5 2.3 M6 0.6 0.7 11.5 11.2 1.3 1.4 A: amplitude in cm, G: phase in °, VD: vector difference in cm Based on 13 Dutch coastal stations November 5, 2014
  • 21. Tide representation in the frequency domain M2 amplitude and phase errors along Dutch coast WAQUA D-Flow FM November 5, 2014
  • 22. November 5, 2014 DCSMv6-ZUNOv4 (Dutch estuaries and Wadden Sea) Based on 16 stations in Dutch estuaries en Wadden Sea RMSE (tide) RMSE (surge) RMSE (total) DCSMv6 (WAQUA) 7.1 7.0 9.9 DCSMv6 (D-Flow FM) 9.9 7.1 12.2 Consistency in depth interpolation options is crucial to achieve similar results
  • 24. Computational time Comparison of computational time •Both models use a computational time step of 2 minutes (determined with convergence tests) •Performance tested on Deltares cluster (quad-core machines) •No use made of enhanced flexibility of D-Flow FM •Speed-up is hardware dependent •More effort required to improve scaling efficiency November 5, 2014 number of nodes (with 4 cores each) comp. time [min per day] number of nodes (with 4 cores each) speed-up [-]
  • 25. Summary and conclusions •Completely redesigned, new generation Dutch Continental Shelf Model version 6 (DCSMv6) has been developed • Year-long simulations show excellent agreement with (shelf-wide) measurements • Running the model in D-Flow FM reduces the water level representation accuracy •It is expected that the D-Flow FM accuracy can be improved with limited re- calibration • For this application D-Flow FM is twice as slow as Simona-Waqua (on one node) •Enhanced flexibility of D-Flow FM has not been used, but will save computational time •Scalability of D-Flow FM is rightly getting more attention (hardware dependent) Next step (1): make use of enhanced flexibility of D-Flow FM to reduce number of cells and increase time step by avoiding unnecessary high resolution in the deeper areas off the shelf Next step (2): Acceptance testing with different models, as results are application dependent November 5, 2014