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DRUG DRUG GENE
INTERACTIONS
Dr Mohit Kher
Assistant Professor
Pharmacology, ESIC
OUTLINE
• Introduction
• Categories of DDGI
• DDTGIs
• Challenges in clinical practice
• Conclusion
INTRODUCTION
• Adverse drug reactions (ADRs) represent the fourth leading cause of death in the USA.
• A review (2015) showed that 3.6% of patients were admitted to hospitals in Europe due
to ADRs and 10% of patients developed side effects during their in-patient stay.
• Estimated that ADRs alone cost the £770 M annually.
• Major culprits- Nonsteroidal anti-inflammatory drugs, diuretics, anticoagulants, and
antiplatelets.
• Factors influence ADRs – Polypharmacy, age, renal function, and other comorbidities.
• Genetic variation is likely to play a crucial role in the development of ADRs.
• When only considering genetic polymorphisms in cytochrome P450 2C9 (CYP2C9),
CYP2C19, and CYP2D6, 15% of the ADRs were due to drug–gene interactions, and
19% were due to drug–drug–gene interactions.
• Incorporation of these gene variants increased the number of predicted clinically critical
drug interactions by ~51%.
• Literature on drug–drug–gene interactions (DDGIs) is limited.
DDGIs can be divided into three main
categories:
• Inhibitory interactions
• Induction interactions
• Phenoconversion interactions
Inhibitory interactions
Induction interactions
Phenoconversion interactions
Drug–drug-transporters genes interactions
(DDTGIs)
• P-glycoprotein 1 (P-gp, ABCB1), multidrug resistance-associated protein 2 (MRP2, ABCC2), and breast
cancer resistant protein (BCRP, ABCG2) transporters are expressed in the intestine, liver, kidney, and
BBB.
• They efflux substrates back to intestinal lumen, facilitate hepatic and renal excretion (excluding BCRP),
and protect the brain from the entry of xenobiotics.
• Cyclosporine is an ABCB1 substrate. Diltiazem (a moderate ABCB1 inhibitor) has been shown to
increase cyclosporin trough concentrations in Chinese patients who carry the TT genotype (low P-gp
activity) at rs1045642(C>T).
• Methadone is also a P-gp substrate, acting in the brain and effluxed across the BBB via P-gp. Patients
with the TT genotype at rs1045642 and treated with quetiapine (ABCB1 inhibitor) experienced the lowest
methadone plasma levels compared with those with CT or CC genotypes.
• Granisetron was associated with increased efficacy in Japanese subjects.
• MRP1(ABCC1), MRP3 (ABCC3), and MRP4(ABCC4) share the similar transport direction in the liver, kidney and
BBB.
• MRP1 transports the active metabolite of irinotecan out of hepatocytes into the blood contributing to the well-known
side effect of irinotecan induced neutropenia.
• The reduced function variant, rs17501331, in the ABCC1 gene is associated with low incidence of neutropenia; the
reverse effect was detected with the GOF variant rs6498588 in the same gene.
• Increased activity of the MRP1 transporter can be advantageous, as seen with methotrexate hepatotoxicity where
carriers of wild-type genotype of ABCC1 rs246240 (A>G) variant are at higher risk for developing methotrexate
toxicity.
• Reduced transport (MRP1) associated with the rs45511401 (G>T) in ABCC1 increases the chance of developing
cardiotoxicity due to intracellular accumulation of doxorubicin.
• MRP2 and BCRP are expressed in the basolateral membrane of the intestine effluxing substrates into the portal
circulation.
• (OCTs)1/2/3, (OATP) 1B1/1B3/2B1 and (MATE) 1/2 are uptake transporters.
• Carriers of two OCT1 (SLC22A1) reduced function alleles who were treated with OCT1 inhibitors were over
four times more likely to develop gastrointestinal side effects with metformin (an OCT1 substrate).
• Mutant alleles and the co-administration of inhibitors was linked to increased metformin plasma levels/toxicity
or reduced hepatic clearance.
• People carrying the rs316019 (C>A) OCT2 mutation were protected from these adverse reactions as the variant
resulted in reduced transport of cisplatin into the kidney and the inner ear (cochlea).
• Statins are taken up into the liver by OATP1B1(SLCO1B1).
• rs4149056 (T>C) (SLCO1B1*15) variant has been connected to increased statin plasma exposure, muscle
aches, myopathy, rarely rhabdomyolysis ,dose reduction, and/or treatment-resistant phenotypes.
• Increase in pravastatin (SLCO1B1 substrate) AUC after treatment with ritonavir (SLCO1B1 inhibitor).
DDGIs and challenges in clinical practice
• Most of the resources commonly used by prescribers (e.g., Stockley’s, Micromedex, Drug.com, RxList,
or other drug interaction checkers) do not consider genetic variation when classifying drug interactions
into minor, moderate, or major classes.
• Precisely tailored drug therapy requires a detailed examination of all mutations in the candidate enzyme
or transporter genes with good awareness of the entire prescribed medications.
• Simple scenario - A patient with type 2 diabetes treated with metformin (has no effect on CYPs) who
carries reduced function variants in CYP2C9 (*2 or *3 variants) and who is started on gliclazide
(CYP2C9/19 substrate). Reduced metabolism of gliclazide will result in increased efficacy and
increased risk of hypoglycemia.
• Pioglitazone and/or atorvastatin (both are CYP2C9/19 inhibitors) would lead to greater risk of gliclazide-
induced hypoglycemia and should be treated with a reduced dose of gliclazide.
• Complex scenario - Carriers of the TC genotype of SLCO1B1 rs4149056 (T>C) variant who are treated
with amlodipine (CYP3A4 inhibitor) experienced a 90% increased simvastatin AUC.
• Subinteractions do not share a similar clinical effect:
Oral rosuvastatin is mainly eliminated via biliary excretion with a minor contribution of CYP2C9 to its
metabolism.
Transporters (e.g., ABCC2, ABCG2, ABCC1, and SLCO1B1) are the core players in its elimination.
Concomitant administration of verapamil (an ABCC1/2 inhibitor) and venlafaxine (an ABCG2 inducer) in
CYP2C9*3 and/or SLCO1B1 rs4149056 (T>C) LOF variants results in unpredictable clinical
consequences.
CYP2C9, SLCO1B1, and ABCC2 impairment would boost rosuvastatin AUC.
Inducing ABCG2 would lower rosuvastatin AUC.
• Using PBPK models, one predictor tool (https://www.ddi-predictor.org/) has recently been successfully
generated to estimate drug exposure and the recommended dose following the dual action of both the
perpetrator drug and mutations in certain CYPs.
• Clinically significant interactions are consistently lower than theoretically predictable interactions.
• Induction and phenoconversion DDGIs are predicted to be seen with lower incidence compared with
inhibitory DDGIs as the majority of perpetrator drugs are inhibitors rather than inducers and most of
functional genetic variants are loss rather than GOF mutations.
• Scotland bioresource - (https://www.registerforshare.org), possible to evaluate DDGIs in ~500 K people
over the next few years.
• UK biobank including genetic information on 500 K individuals
• Danish biorepository and US bioresources linked to EHRs (EMERGE network)
CONCLUSION
REFERENCES
• Malki MA, Pearson ER. Drug-drug-gene interactions and adverse drug
reactions. Pharmacogenomics J. 2020;20(3):355-366. doi:10.1038/s41397-019-
0122-0
• Zhou Y, Lauschke VM. Pharmacogenomic network analysis of the gene-drug
interaction landscape underlying drug disposition. Comput Struct Biotechnol J.
2019;18:52-58. Published 2019 Dec 5. doi:10.1016/j.csbj.2019.11.010
• Božina, Nada et al. “Drug-drug-gene interactions as mediators of adverse drug
reactions to diclofenac and statins: a case report and literature review.” Arhiv za
higijenu rada i toksikologiju vol. 72,3 114-128. 28 Jun. 2021, doi:10.2478/aiht-
2021-72-3549
• Freshour SL, Kiwala S, Cotto KC, et al. Integration of the Drug-Gene Interaction
Database (DGIdb 4.0) with open crowdsource efforts. Nucleic Acids Res.
2021;49(D1):D1144-D1151. doi:10.1093/nar/gkaa1084
THANK YOU

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Drug drug gene interactions

  • 1. DRUG DRUG GENE INTERACTIONS Dr Mohit Kher Assistant Professor Pharmacology, ESIC
  • 2. OUTLINE • Introduction • Categories of DDGI • DDTGIs • Challenges in clinical practice • Conclusion
  • 3. INTRODUCTION • Adverse drug reactions (ADRs) represent the fourth leading cause of death in the USA. • A review (2015) showed that 3.6% of patients were admitted to hospitals in Europe due to ADRs and 10% of patients developed side effects during their in-patient stay. • Estimated that ADRs alone cost the ÂŁ770 M annually. • Major culprits- Nonsteroidal anti-inflammatory drugs, diuretics, anticoagulants, and antiplatelets. • Factors influence ADRs – Polypharmacy, age, renal function, and other comorbidities.
  • 4. • Genetic variation is likely to play a crucial role in the development of ADRs. • When only considering genetic polymorphisms in cytochrome P450 2C9 (CYP2C9), CYP2C19, and CYP2D6, 15% of the ADRs were due to drug–gene interactions, and 19% were due to drug–drug–gene interactions. • Incorporation of these gene variants increased the number of predicted clinically critical drug interactions by ~51%. • Literature on drug–drug–gene interactions (DDGIs) is limited.
  • 5. DDGIs can be divided into three main categories: • Inhibitory interactions • Induction interactions • Phenoconversion interactions
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  • 16. • P-glycoprotein 1 (P-gp, ABCB1), multidrug resistance-associated protein 2 (MRP2, ABCC2), and breast cancer resistant protein (BCRP, ABCG2) transporters are expressed in the intestine, liver, kidney, and BBB. • They efflux substrates back to intestinal lumen, facilitate hepatic and renal excretion (excluding BCRP), and protect the brain from the entry of xenobiotics. • Cyclosporine is an ABCB1 substrate. Diltiazem (a moderate ABCB1 inhibitor) has been shown to increase cyclosporin trough concentrations in Chinese patients who carry the TT genotype (low P-gp activity) at rs1045642(C>T). • Methadone is also a P-gp substrate, acting in the brain and effluxed across the BBB via P-gp. Patients with the TT genotype at rs1045642 and treated with quetiapine (ABCB1 inhibitor) experienced the lowest methadone plasma levels compared with those with CT or CC genotypes. • Granisetron was associated with increased efficacy in Japanese subjects.
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  • 18. • MRP1(ABCC1), MRP3 (ABCC3), and MRP4(ABCC4) share the similar transport direction in the liver, kidney and BBB. • MRP1 transports the active metabolite of irinotecan out of hepatocytes into the blood contributing to the well-known side effect of irinotecan induced neutropenia. • The reduced function variant, rs17501331, in the ABCC1 gene is associated with low incidence of neutropenia; the reverse effect was detected with the GOF variant rs6498588 in the same gene. • Increased activity of the MRP1 transporter can be advantageous, as seen with methotrexate hepatotoxicity where carriers of wild-type genotype of ABCC1 rs246240 (A>G) variant are at higher risk for developing methotrexate toxicity. • Reduced transport (MRP1) associated with the rs45511401 (G>T) in ABCC1 increases the chance of developing cardiotoxicity due to intracellular accumulation of doxorubicin. • MRP2 and BCRP are expressed in the basolateral membrane of the intestine effluxing substrates into the portal circulation.
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  • 20. • (OCTs)1/2/3, (OATP) 1B1/1B3/2B1 and (MATE) 1/2 are uptake transporters. • Carriers of two OCT1 (SLC22A1) reduced function alleles who were treated with OCT1 inhibitors were over four times more likely to develop gastrointestinal side effects with metformin (an OCT1 substrate). • Mutant alleles and the co-administration of inhibitors was linked to increased metformin plasma levels/toxicity or reduced hepatic clearance. • People carrying the rs316019 (C>A) OCT2 mutation were protected from these adverse reactions as the variant resulted in reduced transport of cisplatin into the kidney and the inner ear (cochlea). • Statins are taken up into the liver by OATP1B1(SLCO1B1). • rs4149056 (T>C) (SLCO1B1*15) variant has been connected to increased statin plasma exposure, muscle aches, myopathy, rarely rhabdomyolysis ,dose reduction, and/or treatment-resistant phenotypes. • Increase in pravastatin (SLCO1B1 substrate) AUC after treatment with ritonavir (SLCO1B1 inhibitor).
  • 21. DDGIs and challenges in clinical practice • Most of the resources commonly used by prescribers (e.g., Stockley’s, Micromedex, Drug.com, RxList, or other drug interaction checkers) do not consider genetic variation when classifying drug interactions into minor, moderate, or major classes. • Precisely tailored drug therapy requires a detailed examination of all mutations in the candidate enzyme or transporter genes with good awareness of the entire prescribed medications. • Simple scenario - A patient with type 2 diabetes treated with metformin (has no effect on CYPs) who carries reduced function variants in CYP2C9 (*2 or *3 variants) and who is started on gliclazide (CYP2C9/19 substrate). Reduced metabolism of gliclazide will result in increased efficacy and increased risk of hypoglycemia.
  • 22. • Pioglitazone and/or atorvastatin (both are CYP2C9/19 inhibitors) would lead to greater risk of gliclazide- induced hypoglycemia and should be treated with a reduced dose of gliclazide. • Complex scenario - Carriers of the TC genotype of SLCO1B1 rs4149056 (T>C) variant who are treated with amlodipine (CYP3A4 inhibitor) experienced a 90% increased simvastatin AUC. • Subinteractions do not share a similar clinical effect: Oral rosuvastatin is mainly eliminated via biliary excretion with a minor contribution of CYP2C9 to its metabolism. Transporters (e.g., ABCC2, ABCG2, ABCC1, and SLCO1B1) are the core players in its elimination. Concomitant administration of verapamil (an ABCC1/2 inhibitor) and venlafaxine (an ABCG2 inducer) in CYP2C9*3 and/or SLCO1B1 rs4149056 (T>C) LOF variants results in unpredictable clinical consequences. CYP2C9, SLCO1B1, and ABCC2 impairment would boost rosuvastatin AUC. Inducing ABCG2 would lower rosuvastatin AUC.
  • 23. • Using PBPK models, one predictor tool (https://www.ddi-predictor.org/) has recently been successfully generated to estimate drug exposure and the recommended dose following the dual action of both the perpetrator drug and mutations in certain CYPs. • Clinically significant interactions are consistently lower than theoretically predictable interactions. • Induction and phenoconversion DDGIs are predicted to be seen with lower incidence compared with inhibitory DDGIs as the majority of perpetrator drugs are inhibitors rather than inducers and most of functional genetic variants are loss rather than GOF mutations. • Scotland bioresource - (https://www.registerforshare.org), possible to evaluate DDGIs in ~500 K people over the next few years. • UK biobank including genetic information on 500 K individuals • Danish biorepository and US bioresources linked to EHRs (EMERGE network)
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  • 26. REFERENCES • Malki MA, Pearson ER. Drug-drug-gene interactions and adverse drug reactions. Pharmacogenomics J. 2020;20(3):355-366. doi:10.1038/s41397-019- 0122-0 • Zhou Y, Lauschke VM. Pharmacogenomic network analysis of the gene-drug interaction landscape underlying drug disposition. Comput Struct Biotechnol J. 2019;18:52-58. Published 2019 Dec 5. doi:10.1016/j.csbj.2019.11.010 • BoĹžina, Nada et al. “Drug-drug-gene interactions as mediators of adverse drug reactions to diclofenac and statins: a case report and literature review.” Arhiv za higijenu rada i toksikologiju vol. 72,3 114-128. 28 Jun. 2021, doi:10.2478/aiht- 2021-72-3549 • Freshour SL, Kiwala S, Cotto KC, et al. Integration of the Drug-Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts. Nucleic Acids Res. 2021;49(D1):D1144-D1151. doi:10.1093/nar/gkaa1084

Hinweis der Redaktion

  1. Blocking their function in the intestine, liver, or kidney is expected to elevate a substrate’s systemic exposure (although opposite effects would be predicted if inhibiting transport across the BBB).