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Digital Transformation in Healthcare
Building a low latency data pipeline
October 17, 2018
Dmitry Milman & Ankur Kaneria – Express Scripts
2
© 2018 Express Scripts. All Rights Reserved.
Agenda
• Who we are
• Existing Architecture
• Entity Architecture
• Data Sync Platform
• Current Pipeline Footprint
• Achieving Transactional Consistency
• Data Pipeline Health
• Initial Load of Data
• What’s Next
3
© 2018 Express Scripts. All Rights Reserved.
What does Express Scripts do ?
• Fortune 25. Ticker: ESRX
• Just like your medical plan covers visits to your doctor, your
Express Scripts prescription plan covers the medicine your
doctor prescribes
• We’re the largest independent manager of pharmacy benefits in
the United States and one of the country’s largest pharmacies
• Serve more than 85 million people. Every 4th American is our
member
• Claims Volume
• Daily ~6 million
• Annual ~2 Billion
4
© 2018 Express Scripts. All Rights Reserved.
Executive Summary
• In the past, we rebuilt the same functionality for every big project
• Entity Platform strategy focuses on building once and reusing
• This increases up-front costs, but decreases capital spend over time & increases
speed of delivery
W H Y W E ’ R E M O V I N G TO E N TI TI E S
Pharmacy
As A
Platform
Rebates
20/20
Support
Clients
Manage
Products
Orders
Member
Prescription
Orders
Claim
Benefit
Contract
Claim
Benefit
Contract
Member
Benefit
Pharmacy
As A
Platform
Rebates
20/20
Support
Clients
Manage
Products
Orders Prescription Benefit
Member Claim Contract
Data
Sync
5
© 2018 Express Scripts. All Rights Reserved.
Walking the Interaction and Business Tier Stack
User Interaction Channels
(Applications)
Business Platforms
User Interface
Logic
Human Workflow
UI Frameworks
Business platforms
consists of entities
with REST-based
APIs that
completely control
access to a data
domain.
They are first class
citizens.
RequiredRequired
Web Sites
Mobile Apps
…and more...
Entity
Platform
Entity
Platform
Entity
Platform
Data Data Data
Person
Membership
Referral
Order
Shipment
Drug
Price Quote
and more...
Interaction APIs
Aggregations
UX-Specific Views
Optional
User-specific order
status
Cross-entity items, not aligned with a UI
that don’t map to an entity.
Optional
Business Process & Logic
6
© 2018 Express Scripts. All Rights Reserved.
Claims History Lookup
Member Site
(Applications)
Business Platforms
Member Website
Used by our members to
view claims history,
orders etc.
RequiredRequired
User
Accounts
Person
Entity
Claims
Entity
Data Data Data
1. Member login in. Authenticated
through User Accounts
2. A resource id that uniquely identifies
the member is retrieved
3. Using the unique member key,
appropriate member specific claims
history data is accessed and
displayed to the member
1 2 3
7
© 2018 Express Scripts. All Rights Reserved.
Target Sync
Platform
Data Sync Platform
Source
Service
Platform
Source
DB
Source
Service
Target
Service
Platform
Target
Fail Topic
Retry
Stream
Processor
Target
DB
Target
Service
Source
Change Topic
Target
Change Topic
CDC
Stream
Processor
Update
Stream
Processor
on error
• Change Data Capture
• Kafka
• Stream Processors
• Entity store
8
© 2018 Express Scripts. All Rights Reserved.
Pipeline Footprint at a Glance
Attunity Kafka
• Replicate
• Version 6.0
• 4 VMs
• Each 8 Core, 32 GB RAM, Linux
• Active/Standby
• Brokers
• 8 node cluster
• 8 x 24Cores, 256GB RAM, 22TB HD
• 4TB SSD for OS
• Enterprise Manager (AEM)
• Version 6.1
• 1 VM
• 8 Core, 32 GB RAM, Windows
• ZooKeeper
• 5 nodes ensemble
• 5 x 36Cores, 256GB RAM, 7TB HD
• 4TB SSD for OS and (500 GB for ZK
data)
• 1 Schema Registry, 1 Control Center
9
© 2018 Express Scripts. All Rights Reserved.
Topic.T1
Topic.T2
Topic.T3
CDC
Stream Join
Table1
Table2
Table3
Tran1 Tran2 Tran3 Tran4 Tran5 Tran6
Transactional Consistency and CDC
Merged
Stream
10
© 2018 Express Scripts. All Rights Reserved.
Transactional Consistency and CDC – Contd…
• Transactions can impact multiple tables
• Attunity bulk writes all events making up a transaction
• Natural order of events guaranteed only at partition level
• Kafka streams applications need to aggregate events
• Aggregated events need to be applied as a single unit
11
© 2018 Express Scripts. All Rights Reserved.
Grouping Related Events
• Aggregate events in the same window
• Event emitted for each aggregation
• How to know all events arrived?
https://kafka.apache.org/11/documentation/streams/
developer-guide/dsl-api.html#session-windows
12
© 2018 Express Scripts. All Rights Reserved.
Possible Solution
• Related events should be together
• https://www.confluent.io/blog/put-several-event-types-kafka-topic/
• Handle deserializing different event types
• Confluent Schema Registry supports multiple Avro types on same topic
vs.
13
© 2018 Express Scripts. All Rights Reserved.
Partitioning Strategies
• Transaction
• Potential out of order events
partition 0
partition 1
partition 0
partition 1
• Entity key
14
© 2018 Express Scripts. All Rights Reserved.
CDC Stream Processor
Stream
Time (ms)
0 50 100 150 200 250 300 350 400 450 500 550 600 650
UpdateTopic
• Leverages Kafka Processor API and state store
• Punctuation handles inactivity gap
State Store
15
© 2018 Express Scripts. All Rights Reserved.
Update Processor
• Receives aggregated events from CDC processor
• Merges new state with current
• Create
• Update
• Integrity checks
• Error handling
16
© 2018 Express Scripts. All Rights Reserved.
Pipeline Data Integrity
• Error processor
• One way flow of data
1
2
3
Source
DB
Retry Topic
CDC Topic
Entity
Update Topic
Target Sync
Platform
Retry
Stream
Processor
CDC
Stream
Processor
Update
Stream
Processor
Data
Services
REST API
17
© 2018 Express Scripts. All Rights Reserved.
Reconciliation
• High level existence check
• Data Compare
Source
vs.
Target
Missing on Target
Missing on Source
+
18
© 2018 Express Scripts. All Rights Reserved.
Performance of the Pipeline
• Latency monitoring
• Throughput monitoring
19
© 2018 Express Scripts. All Rights Reserved.
Prerequisites
• Initial load is needed for stateful data
• Initial load strategies
• CDC provided functionality
• Sqoop/Spark
• Microbatched extraction
20
© 2018 Express Scripts. All Rights Reserved.
What’s Next
• Data Lake for analytics
• Incorporate Elasticsearch for improved searching
• Microservices to act on data events in real time

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Digital Transformation in Healthcare with Kafka—Building a Low Latency Data Pipeline

  • 1. Digital Transformation in Healthcare Building a low latency data pipeline October 17, 2018 Dmitry Milman & Ankur Kaneria – Express Scripts
  • 2. 2 © 2018 Express Scripts. All Rights Reserved. Agenda • Who we are • Existing Architecture • Entity Architecture • Data Sync Platform • Current Pipeline Footprint • Achieving Transactional Consistency • Data Pipeline Health • Initial Load of Data • What’s Next
  • 3. 3 © 2018 Express Scripts. All Rights Reserved. What does Express Scripts do ? • Fortune 25. Ticker: ESRX • Just like your medical plan covers visits to your doctor, your Express Scripts prescription plan covers the medicine your doctor prescribes • We’re the largest independent manager of pharmacy benefits in the United States and one of the country’s largest pharmacies • Serve more than 85 million people. Every 4th American is our member • Claims Volume • Daily ~6 million • Annual ~2 Billion
  • 4. 4 © 2018 Express Scripts. All Rights Reserved. Executive Summary • In the past, we rebuilt the same functionality for every big project • Entity Platform strategy focuses on building once and reusing • This increases up-front costs, but decreases capital spend over time & increases speed of delivery W H Y W E ’ R E M O V I N G TO E N TI TI E S Pharmacy As A Platform Rebates 20/20 Support Clients Manage Products Orders Member Prescription Orders Claim Benefit Contract Claim Benefit Contract Member Benefit Pharmacy As A Platform Rebates 20/20 Support Clients Manage Products Orders Prescription Benefit Member Claim Contract Data Sync
  • 5. 5 © 2018 Express Scripts. All Rights Reserved. Walking the Interaction and Business Tier Stack User Interaction Channels (Applications) Business Platforms User Interface Logic Human Workflow UI Frameworks Business platforms consists of entities with REST-based APIs that completely control access to a data domain. They are first class citizens. RequiredRequired Web Sites Mobile Apps …and more... Entity Platform Entity Platform Entity Platform Data Data Data Person Membership Referral Order Shipment Drug Price Quote and more... Interaction APIs Aggregations UX-Specific Views Optional User-specific order status Cross-entity items, not aligned with a UI that don’t map to an entity. Optional Business Process & Logic
  • 6. 6 © 2018 Express Scripts. All Rights Reserved. Claims History Lookup Member Site (Applications) Business Platforms Member Website Used by our members to view claims history, orders etc. RequiredRequired User Accounts Person Entity Claims Entity Data Data Data 1. Member login in. Authenticated through User Accounts 2. A resource id that uniquely identifies the member is retrieved 3. Using the unique member key, appropriate member specific claims history data is accessed and displayed to the member 1 2 3
  • 7. 7 © 2018 Express Scripts. All Rights Reserved. Target Sync Platform Data Sync Platform Source Service Platform Source DB Source Service Target Service Platform Target Fail Topic Retry Stream Processor Target DB Target Service Source Change Topic Target Change Topic CDC Stream Processor Update Stream Processor on error • Change Data Capture • Kafka • Stream Processors • Entity store
  • 8. 8 © 2018 Express Scripts. All Rights Reserved. Pipeline Footprint at a Glance Attunity Kafka • Replicate • Version 6.0 • 4 VMs • Each 8 Core, 32 GB RAM, Linux • Active/Standby • Brokers • 8 node cluster • 8 x 24Cores, 256GB RAM, 22TB HD • 4TB SSD for OS • Enterprise Manager (AEM) • Version 6.1 • 1 VM • 8 Core, 32 GB RAM, Windows • ZooKeeper • 5 nodes ensemble • 5 x 36Cores, 256GB RAM, 7TB HD • 4TB SSD for OS and (500 GB for ZK data) • 1 Schema Registry, 1 Control Center
  • 9. 9 © 2018 Express Scripts. All Rights Reserved. Topic.T1 Topic.T2 Topic.T3 CDC Stream Join Table1 Table2 Table3 Tran1 Tran2 Tran3 Tran4 Tran5 Tran6 Transactional Consistency and CDC Merged Stream
  • 10. 10 © 2018 Express Scripts. All Rights Reserved. Transactional Consistency and CDC – Contd… • Transactions can impact multiple tables • Attunity bulk writes all events making up a transaction • Natural order of events guaranteed only at partition level • Kafka streams applications need to aggregate events • Aggregated events need to be applied as a single unit
  • 11. 11 © 2018 Express Scripts. All Rights Reserved. Grouping Related Events • Aggregate events in the same window • Event emitted for each aggregation • How to know all events arrived? https://kafka.apache.org/11/documentation/streams/ developer-guide/dsl-api.html#session-windows
  • 12. 12 © 2018 Express Scripts. All Rights Reserved. Possible Solution • Related events should be together • https://www.confluent.io/blog/put-several-event-types-kafka-topic/ • Handle deserializing different event types • Confluent Schema Registry supports multiple Avro types on same topic vs.
  • 13. 13 © 2018 Express Scripts. All Rights Reserved. Partitioning Strategies • Transaction • Potential out of order events partition 0 partition 1 partition 0 partition 1 • Entity key
  • 14. 14 © 2018 Express Scripts. All Rights Reserved. CDC Stream Processor Stream Time (ms) 0 50 100 150 200 250 300 350 400 450 500 550 600 650 UpdateTopic • Leverages Kafka Processor API and state store • Punctuation handles inactivity gap State Store
  • 15. 15 © 2018 Express Scripts. All Rights Reserved. Update Processor • Receives aggregated events from CDC processor • Merges new state with current • Create • Update • Integrity checks • Error handling
  • 16. 16 © 2018 Express Scripts. All Rights Reserved. Pipeline Data Integrity • Error processor • One way flow of data 1 2 3 Source DB Retry Topic CDC Topic Entity Update Topic Target Sync Platform Retry Stream Processor CDC Stream Processor Update Stream Processor Data Services REST API
  • 17. 17 © 2018 Express Scripts. All Rights Reserved. Reconciliation • High level existence check • Data Compare Source vs. Target Missing on Target Missing on Source +
  • 18. 18 © 2018 Express Scripts. All Rights Reserved. Performance of the Pipeline • Latency monitoring • Throughput monitoring
  • 19. 19 © 2018 Express Scripts. All Rights Reserved. Prerequisites • Initial load is needed for stateful data • Initial load strategies • CDC provided functionality • Sqoop/Spark • Microbatched extraction
  • 20. 20 © 2018 Express Scripts. All Rights Reserved. What’s Next • Data Lake for analytics • Incorporate Elasticsearch for improved searching • Microservices to act on data events in real time