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Twenty five years in cheminformatics –
a career path through a diverse series
of roles and responsibilities
Antony Williams
National Center for Computational Toxicology
U.S. Environmental Protection Agency, RTP, NC
April 2017
ACS Spring Meeting, San Francisco, CA
http://www.orcid.org/0000-0002-2668-4821
The views expressed in this presentation are those of the author and do not necessarily reflect the views or policies of the U.S. EPA
Being Data Driven…about me
1
My background…
• Worked in
– Government lab as postdoc
– Academia as NMR Facility Manager
– Fortune 500 Company as NMR Tech Leader
– Small start-up company as product manager,
marketing manager, Chief Science Officer
– Consultant – chemistry informatics industry
– Company owner – created ChemSpider
– Royal Society of Chemistry (bought ChemSpider)
– US-EPA – cheminformatician and “connector”
Who am I today?
• Computational chemist at the US-EPA – scientist
• Responsibility for cheminformatics projects, internal
& external collaborations, “product marketing”–
cheminformatician
• Work with a team of people developing software
solutions – “product & project manager”
• Scientific publications, books, blogger – author; I
am @ChemConnector – social networker
Being philosophical…
4
What have I learned in my career?
• Much time is spent working - not enjoying it is
not an option for me
• However, it is called “work” for a reason – if you
enjoyed every moment it would be a hobby
• Continue to sharpen your toolset as time and
projects allow. Don’t fear going outside the box
What have I learned in my career?
• “Playing it safe” is a perfectly valid option – but
rarely effects change and innovation
• Use your head & heart to make career choices
• Say what you are going to do and do what you
say – it defines your reputation as an employee
• Careers are made – they don’t just happen
“Work” versus “Passion”
• We all need to work but choose to work on things
that give you a good emotional response…
stimulate interest, lack of sleep, joy, obsession…
• Develop new skills, step out-of-the-box and extend
yourself. What you know now is never enough…
• Balance logical decisions with gut-level responses
• Work somewhere that supports your passion(s)
Education…B.Sc 1982-85
• I always found Chemistry interesting….but never
found it easy!
• Master of crystallization and yield
• Almost bottom of my class for PhysChem! –
spectroscopy made no sense but was fascinating!
• Self-realization – “Beat the Challenge” – had to
study it until I got it.
What brings me joy?
• Figure out early what brings you joy and
what drives if you can (not so easy!)
• The list below fits for me:
– Creating solutions to difficult problems
– Building and playing with functional teams
– Communicating complexities
– Acts of service for my community
– Working with people more skilled than me
Post Doc 1988-90
• Multiple offers for NMR Postdocs in USA
(PhD studies)
• One offer for ESR/EPR Postdoc in Canada
• Why Canada?
• Emotional decision…
– Exploration is fun
– Out of the box motivates
NMR Technology Leader, Kodak
1992-1997
• Business Driver: Do more analyses faster and with
higher quality. Walk-up automation for analytical
support, Get data to chemists
• Business Driver: Improve NMR Data analysis- can
software outperform people for analysis?
• Business Driver: Sample tracking – LIMS as the
internet was born
• I entered cheminformatics for BUSINESS REASONS
ACD/Labs Start-up 1997-2007
Commercial Cheminformatics
• Creativity at its best – new products, new markets,
design work, marketing, good science
• From NMR spectroscopist to deeply understanding
chemical nomenclature, structure representation and
databasing, data integration, and the web
• My greatest joys – solving problems for people and
innovating scientific solutions with computers
• My driver – “Help OTHER people be more successful”
Can software outperform people?
• Chemistry skills into software – YES, software can
outperform people in so many areas!!!
• Nomenclature generation, PhysChem prediction,
NMR analysis, Structure Elucidation
A HOBBY PROJECT just because…
Combining Skills and Passion
• Use technology to spider the internet for chemicals
• Hobby project built in a basement – thousands of
visitors a day.
• Judged harshly in the blogosphere but “beat the
challenge” by engaging in it…
• Acquired by RSC – chose them as the best partner to
define the world of web-based chemistry
~6 years with RSC & ChemSpider
• Bringing my cheminformatics skills to bear
– Publishing (how to enrich publications with data)
– Large European Projects
• Open PHACTS (drug discovery data/semantic web)
• PharmaSea Natural Products Discovery
• National Chemical Database Service
– Building a user community for ChemSpider – to over
50,000 users a day by education, sharing and engagement
(i.e. connecting)
– Delivering tools to support the community
15
Cheminformatics
• Whatever your chemistry interests, if you
like applying computational science there
are possibilities
– Spectroscopy (analysis, prediction, elucidation)
– Synthesis (databasing, representation, retrosynthesis)
– Drug design (docking, screening, property prediction)
– Nanomaterials (databasing, design, QSAR)
• Where are computers NOT having an
impact in chemistry…
16
Openness in Chemistry
• The majority of us are passionate about
ODOSOS – Open Data, Open Source and
Open Standards
• My passion for supporting Openness was
not being fulfilled so I joined a government
laboratory with full support for public
domain data
• Your impact can be much broader when
contributing code, data and to standards
17
It finally made sense…
• This book brought it into
perspective for me…
18
It might be useful…
• http://www.productiveflourishing.com/maven-connector-
or-salesperson-whats-your-archetype
19
I might be a connector..
http://www.productiveflourishing.com/maven-connector-or-salesperson-whats-your-archetype
• You might be a connector if:
• You are constantly referring people to the
right expert or service to solve their problem.
• You love networking and talking with people,
just for the sake of doing it.
• When you’re talking to people, they say,
“Wow – you know everyone!”
• The stories you tell always focus on
the people, not the ideas or the sizzle.
20
A Personal Interest
Social Networking in Science
• I think you should ALL take part in “connecting”
yourselves to the growing network
• Career-wise, NOT having a personal presence
online is likely already a detriment
– Establishing a public profile
– Getting on the record
– Collaborative Science
– Demonstrating a skill set
– Measured using alternative metrics
– Contributing to the public peer review process
Maybe of use…
• https://www.slideshare.net/AntonyWilliams/building-an-online-
profile-social-networking-and-amplification-tools-for-scientists
22
Conclusions…what worked for me..
• I LOVE Chemistry – but never want to synthesize
again! (However…give me an NMR spectrometer )
• Career choices should be head & heart decisions
• Decide what motivates, excites and stimulates you
over what puts food on the table. (Clearly driven by
the need to eat also!!!)
Conclusions…what worked for me..
• You are responsible for your reputation – build it and
maintain it - and with online tools take charge of it!
• Not every decision is a good one – but not making
decisions is crippling in terms of your career
• In cheminformatics there are very few limits
– Always something to learn
– Contribute and share data, code and skills openly
– Get into the network – Wikipedia, StackOverflow, etc.
– Join the ACS CINF Division and participate
Coming Soon….
ACS CINF ONLINE WEBINAR
“Profile Building, Research Sharing and
Data Proliferation using Social Media
Tools for Scientists”
May 1st 2pm EST
25

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Twenty Five Years in Cheminformatics – A Career Path Through a Diverse Series of Roles and Responsibilities

  • 1. Twenty five years in cheminformatics – a career path through a diverse series of roles and responsibilities Antony Williams National Center for Computational Toxicology U.S. Environmental Protection Agency, RTP, NC April 2017 ACS Spring Meeting, San Francisco, CA http://www.orcid.org/0000-0002-2668-4821 The views expressed in this presentation are those of the author and do not necessarily reflect the views or policies of the U.S. EPA
  • 3. My background… • Worked in – Government lab as postdoc – Academia as NMR Facility Manager – Fortune 500 Company as NMR Tech Leader – Small start-up company as product manager, marketing manager, Chief Science Officer – Consultant – chemistry informatics industry – Company owner – created ChemSpider – Royal Society of Chemistry (bought ChemSpider) – US-EPA – cheminformatician and “connector”
  • 4. Who am I today? • Computational chemist at the US-EPA – scientist • Responsibility for cheminformatics projects, internal & external collaborations, “product marketing”– cheminformatician • Work with a team of people developing software solutions – “product & project manager” • Scientific publications, books, blogger – author; I am @ChemConnector – social networker
  • 6. What have I learned in my career? • Much time is spent working - not enjoying it is not an option for me • However, it is called “work” for a reason – if you enjoyed every moment it would be a hobby • Continue to sharpen your toolset as time and projects allow. Don’t fear going outside the box
  • 7. What have I learned in my career? • “Playing it safe” is a perfectly valid option – but rarely effects change and innovation • Use your head & heart to make career choices • Say what you are going to do and do what you say – it defines your reputation as an employee • Careers are made – they don’t just happen
  • 8. “Work” versus “Passion” • We all need to work but choose to work on things that give you a good emotional response… stimulate interest, lack of sleep, joy, obsession… • Develop new skills, step out-of-the-box and extend yourself. What you know now is never enough… • Balance logical decisions with gut-level responses • Work somewhere that supports your passion(s)
  • 9. Education…B.Sc 1982-85 • I always found Chemistry interesting….but never found it easy! • Master of crystallization and yield • Almost bottom of my class for PhysChem! – spectroscopy made no sense but was fascinating! • Self-realization – “Beat the Challenge” – had to study it until I got it.
  • 10. What brings me joy? • Figure out early what brings you joy and what drives if you can (not so easy!) • The list below fits for me: – Creating solutions to difficult problems – Building and playing with functional teams – Communicating complexities – Acts of service for my community – Working with people more skilled than me
  • 11. Post Doc 1988-90 • Multiple offers for NMR Postdocs in USA (PhD studies) • One offer for ESR/EPR Postdoc in Canada • Why Canada? • Emotional decision… – Exploration is fun – Out of the box motivates
  • 12. NMR Technology Leader, Kodak 1992-1997 • Business Driver: Do more analyses faster and with higher quality. Walk-up automation for analytical support, Get data to chemists • Business Driver: Improve NMR Data analysis- can software outperform people for analysis? • Business Driver: Sample tracking – LIMS as the internet was born • I entered cheminformatics for BUSINESS REASONS
  • 13. ACD/Labs Start-up 1997-2007 Commercial Cheminformatics • Creativity at its best – new products, new markets, design work, marketing, good science • From NMR spectroscopist to deeply understanding chemical nomenclature, structure representation and databasing, data integration, and the web • My greatest joys – solving problems for people and innovating scientific solutions with computers • My driver – “Help OTHER people be more successful”
  • 14. Can software outperform people? • Chemistry skills into software – YES, software can outperform people in so many areas!!! • Nomenclature generation, PhysChem prediction, NMR analysis, Structure Elucidation
  • 15. A HOBBY PROJECT just because… Combining Skills and Passion • Use technology to spider the internet for chemicals • Hobby project built in a basement – thousands of visitors a day. • Judged harshly in the blogosphere but “beat the challenge” by engaging in it… • Acquired by RSC – chose them as the best partner to define the world of web-based chemistry
  • 16. ~6 years with RSC & ChemSpider • Bringing my cheminformatics skills to bear – Publishing (how to enrich publications with data) – Large European Projects • Open PHACTS (drug discovery data/semantic web) • PharmaSea Natural Products Discovery • National Chemical Database Service – Building a user community for ChemSpider – to over 50,000 users a day by education, sharing and engagement (i.e. connecting) – Delivering tools to support the community 15
  • 17. Cheminformatics • Whatever your chemistry interests, if you like applying computational science there are possibilities – Spectroscopy (analysis, prediction, elucidation) – Synthesis (databasing, representation, retrosynthesis) – Drug design (docking, screening, property prediction) – Nanomaterials (databasing, design, QSAR) • Where are computers NOT having an impact in chemistry… 16
  • 18. Openness in Chemistry • The majority of us are passionate about ODOSOS – Open Data, Open Source and Open Standards • My passion for supporting Openness was not being fulfilled so I joined a government laboratory with full support for public domain data • Your impact can be much broader when contributing code, data and to standards 17
  • 19. It finally made sense… • This book brought it into perspective for me… 18
  • 20. It might be useful… • http://www.productiveflourishing.com/maven-connector- or-salesperson-whats-your-archetype 19
  • 21. I might be a connector.. http://www.productiveflourishing.com/maven-connector-or-salesperson-whats-your-archetype • You might be a connector if: • You are constantly referring people to the right expert or service to solve their problem. • You love networking and talking with people, just for the sake of doing it. • When you’re talking to people, they say, “Wow – you know everyone!” • The stories you tell always focus on the people, not the ideas or the sizzle. 20
  • 22. A Personal Interest Social Networking in Science • I think you should ALL take part in “connecting” yourselves to the growing network • Career-wise, NOT having a personal presence online is likely already a detriment – Establishing a public profile – Getting on the record – Collaborative Science – Demonstrating a skill set – Measured using alternative metrics – Contributing to the public peer review process
  • 23. Maybe of use… • https://www.slideshare.net/AntonyWilliams/building-an-online- profile-social-networking-and-amplification-tools-for-scientists 22
  • 24. Conclusions…what worked for me.. • I LOVE Chemistry – but never want to synthesize again! (However…give me an NMR spectrometer ) • Career choices should be head & heart decisions • Decide what motivates, excites and stimulates you over what puts food on the table. (Clearly driven by the need to eat also!!!)
  • 25. Conclusions…what worked for me.. • You are responsible for your reputation – build it and maintain it - and with online tools take charge of it! • Not every decision is a good one – but not making decisions is crippling in terms of your career • In cheminformatics there are very few limits – Always something to learn – Contribute and share data, code and skills openly – Get into the network – Wikipedia, StackOverflow, etc. – Join the ACS CINF Division and participate
  • 26. Coming Soon…. ACS CINF ONLINE WEBINAR “Profile Building, Research Sharing and Data Proliferation using Social Media Tools for Scientists” May 1st 2pm EST 25