Cataloging computationally putative resistance genes in grape and
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Cataloging computationally putative resistance genes in grape and
- 1. “ Cataloging Computationally Putative Resistance Genes in Grape and Their Corresponding Pathogenicity Genes” Bioinformatics Project Dr. Yaqoub Ashhab Amer Wazwaz & Murad Shneawer 26/5/2011
- 5. Real Examples (1) rpfF Xylella fastidiosa subsp Temecula1 Gene ID : 1144610 Xylella fastidiosa subsp . fastidiosa complete genome ACCESSION CP002165
- 7. Real Examples (2) virB2 Agrobacterium tumefaciens Gene ID : 1224319 Agrobacterium vitis complete sequence NC_011988.1 : Accession
- 12. Search for Resistance Genes in Arabidopsis Thaliana
- 13. 1. PR5 ( Gene ID: 843842) CDS
- 14. PR5 v.s Vitis vinifera
- 16. 82% identity in Vitis vinifera
- 17. Vitis vinifera PR5 v.s CDS identity 82%
- 19. 2. NPR1 ( Gene ID: 842733) CDS
- 20. Blast NPR1 v.s Vitis vinifera
- 21. NPR1 V.S 72 % Vitis vinifera
- 22. 3. Blast RPS4 Gene ID ( 834561) CDS V.S Vitis vinifera
- 23. 83%Vitis vinifera RPS4 V.S