SlideShare ist ein Scribd-Unternehmen logo
1 von 12
Downloaden Sie, um offline zu lesen
Advances in Life Science and Technology www.iiste.org
ISSN 2224-7181 (Paper) ISSN 2225-062X (Online)
Vol.11, 2013
8
Ion Exchange Fractionation of Rabbits Seminal Fluid:
Recognizing a DNA Retardation Activity from the Main DNase
Activity
Mohammed Baqur Al-Shuhaib1
, Ali Al-Saadi2
, Mahanem Noor3
, Mufeed Ewadh4*
1. Department of Biology – College of science for Women – University of Babylon
2. Department of Biology – College of Science – University of Babylon
3. School of Biosciences and Biotechnology – Faculty of Science and Technology – University Kebangsaan Malaysia (UKM)
4. Department of Clinical BioChemistry – College of Medicine – University of Babylon
.
*
Email: mewadh@yahoo.com
Abstract
The role of seminal proteins charge on the nature of seminal fluid inhibitory effect that exerted against
exogenous DNA. Has been identified and an approach closely with more details to the nature of inhibitory
activities available in rabbit seminal fluid proteins that prevent the entry of exogenous DNA into the head of
sperm. After collection of rabbit’s ejaculate and removing sperm cells, seminal fluid was incubated with fixed
concentration of exogenous DNA. The seminal fluid – exogenous DNA mixture was analyzed by
electrophoresis. Ion exchange chromatography was used to separate seminal proteins on the basis of their charge.
Positively charged proteins were eluted, lyophilized, and their profile was characterized by SDS-PAGE and
native-PAGE. After incubation of this eluted group with the same source of DNA, the same electrophoretic
conditions were applied on this group.
According to our knowledge, this is the first paper in which ion exchange chromatography was used to separate
two DNA counterfeiting activities of the seminal fluid using non-radioactive method in rabbits and even in other
mammals. Thus, more than one inhibitory activity were identified and separated. DNA retardation activity (or
DNA binding activity) which repressed DNA electrophoretic migration was the only activity that found to be
available on the positively charged fractions while the DNase activity was found exclusively on the negatively
charged group.
Key words : Seminal fluid , transgenesis techniques , DNA electrophoretic migration , DNase
1.Introduction
In addition to the main line of elucidating transgenesis techniques through sperm mediated gene transfer
(SMGT), there was a parallel line of considerable importance with this field which was represented by the
understanding the molecular level of the protective mode taken from the seminal proteins to prevent the entry of
exogenous DNA .It was demonstrated that certain factor(s) in seminal fluid were found to be responsible about
inhibiting the internalization process of exogenous DNA (Zani et al., 2005). The fact which refers to the
existence of one or more factors in seminal fluid that able to block sperm permeability must be taken into
account. This means, extensive washing steps of ejaculate to remove seminal fluid is necessary and should be
made before incubating sperm with exogenous DNA. Lauria and Gandolfi reviewed that seminal fluid inhibitors
have two ways of inhibition to exogenous DNA, either directly or indirectly (Lauria & Gandolfi, 1993). These
seminal fluid inhibitory factors may prevent transfection of intact sperm by foreign DNA (Camaione et al.,
1992). Gandolfi showed that there is a consensus on the experiments made on seminal fluid of the ejaculated
spermatozoa of mammals in the impermeability of sperm cell to the aggression of foreign DNA as long as
seminal fluid is not removed (Gandolfi, 2000).We think that this route of research is not less important than the
main route since as much as researchers get more understanding to the nature of seminal proteins as much as
they will be more close to elucidate all the natural facts that hamper the enhancement of SMGT.
Aim of study : This work is to evaluate seminal fluid natural defense mechanisms equally with the transgene
entry mechanisms .
2. Materials & Methods
2.1 Materials
Kit; PCR SuperMix (Invitrogen – Cat. # 0572-014), PageSilver™ Silver Staining Kit (Fermentas - Cat
# K0681), Ladders; TrackIt™ 1 Kb Plus DNA Ladder (Invitrogen – Cat. #10488090), DNA size
Advances in Life Science and Technology www.iiste.org
ISSN 2224-7181 (Paper) ISSN 2225-062X (Online)
Vol.11, 2013
9
marker; MassRuler™DNA Ladder Mix (Fermentas – Cat. # SM0403), Protein size Markers; PageRuler™
Unstained Broad Range Protein Ladder (Fermentas – Cat # 1881), Protein low molecular weight size marker
(Amersham – code: 17-0446-01), Oligos; Forward primer (5´–CCATGCCCGAAGGTTATGTA–3´)and reverse
primer (5´– GAAAGGGCAGATTGTGTGGA –3´) Invitrogen. Vector; gWiz-GFP (green fluorescent protein)
vector (Aldevron – Cat. # 5006).
2.2 Experimental Animals:
Eight New Zeeland sexually mature healthy white rabbits were included in this study. New Zeeland white
rabbits were raised in the animal house in the school of bioscience and biotechnology/FST/UKM. They were
individually housed under controlled conditions of temperature (19 – 21 ͦ C) and standard artificial light (12 hour
light and 12 hours dark). A diet of grower rabbits pellets (ad libitum) and fresh water was provided. Animals
were cared according to international standards management established for the care and use of laboratory
animals in facilities approved by the University Kebangsaan Malaysia Animal Ethics Committee (UKMAEC).
2.3 Methods
Collection of seminal fluid: Sperm was collected by home-made artificial vagina. Seminal fluid was separated
from sperm cells by single centrifugation step .
2.3.1 Exogenous DNA - seminal fluid incubation:
gWizGFP ( 6µg) vector was incubated with increasing concentrations of rabbit’s seminal fluid (ranging from 1
to 10µl) and completed to 30µl with sterile deionized water. The incubation was lasted for 60 min at room
temperature. Mixtures were analyzed by agarose gel electrophoresis (fig. 1).
2.3.2 Fractionation with ion exchange chromatography (IEC):
Seminal fluid proteins were fractionated according to Teixereira et al., 2006 and Villemure et al., 2003 with
modifications
2.3.2.1 Resin selection: DEAE cellulose (5 g) (Sigma Aldrich – USA) was applied as anion exchanger for rabbit
seminal fluid fractionation .
2.3.2.2 Regeneration of DEAE-cellulose: Preparative steps were conducted in 500ml capacity flask. DEAE-
cellulose (anion exchanger) was purchased from Sigma. 5 g DEAE-cellulose was slowly added to 300 ml 0.1M
sodium hydroxide with gentle stirrer for 30 min (pH reached to 13). The sodium hydroxide solution was
discarded and the resin was washed with double distilled water until pH reached to pH 8.0. Then the solution
was replaced with 0.1 M hydrochloric acid with stirring for 30 min (pH reached to 1.0). The resin was washed
with double distilled water until pH reached to 3.0. The distilled water was discarded and replaced with 500mM
10X tris buffer pH 8.0 with stirring for 30 min. The 10X buffer was discarded and then the resin was equilibrated
with 50 mM tris HCl pH 8.0. After removing more fines, the suspension of DEAE-cellulose resin was
transferred into a glass column (2x20 Bio-Rad – USA). Length of resin after its packing with 0.01M PBS was
only 4cm. the packed resin was stored in 4ºC until loading samples .
2.3.2.3 Loading sample: The pH of DEAE cellulose effluent was checked up before seminal fluid was applied.
Gravity flow was applied. One ml of seminal fluid containing 3mg of protein was dissolved in 0.02 M phosphate
buffer, pH 7.3, and loaded onto an ion exchange chromatography column (DEAE-cellulose, 2 x 20 cm), which
was previously equilibrated with the same buffer .
2.3.2.4 Elution of positively charged proteins: The column was washed and eluted with 0.01M phosphate buffer
pH 7.3. The column effluent was collected with manual fractionation, 3ml per fraction (fig. 2). Protein
concentrations were spectrophotometrically determined (Spectrophotometer – Shimadzu/Japan). According to
proteins concentration measurement data, the first three fractions were discarded. SDS – Polyacrylamide Gel
Electrophoresis (SDS – PAGE) of the other eluted positively charged proteins was taken place (fig. 3). Laemmli
Advances in Life Science and Technology www.iiste.org
ISSN 2224-7181 (Paper) ISSN 2225-062X (Online)
Vol.11, 2013
10
discontinuous method (Laemmli, 1970) for protein electrophoresis was considered, gel dimensions were 10-cm
wide by 8-cm long and 0.1-cm thick (provided by Bio-Rad – USA). The resolving gel concentration used in
these experiments was 14%. While the stacking gel concentration was 4%. Silver Staining was taken place
according to Fermentas instruction manual (Cat # K0681). Picture was taken by 7.2 Mp digital camera (Sony –
China).
2.3.2.5 Elution of negatively charged proteins: After eluting of positively charged proteins, the other proteins
were eluted from the glass column with 100ml linear gradient of 0-1M NaCl in 0.01M phosphate buffered saline.
Protein concentrations were spectrophotometrically determined (fig. 2).
2.3.2.6 Lyophilization of positively charged rabbit’s seminal fluid protein fractions:
Each five fractions 1 to 5, 6 to 10, 11 to 15, and 16 to 20 were freeze dried (Lyotrap – UK) and SDS-PAGE
(figure 4) and native PAGE (figure 5) were performed for these fractions (fig. 3). Gels were stained by silver
nitrate. Pictures were taken by 7.2 Mp digital camera (Sony – China).
Incubation of eluted and lyophilized positively charged fractions with gWizGFP vector: Fixed concentration
(2µg) of gWizGFP DNA was incubated with variable concentrations of DEAE cellulose positively charged
fractions (ranging from 1µl to 10µl) for one hour at room temperature. After incubation, each sample was
analyzed by agarose gel electrophoresis (fig. 6). Picture was taken by photodocumentation unit (Alpha Innotech
– USA).
PCR primers design for gWizGFP gene: Two specific primers for the transgene green fluorescent protein (GFP)
in gWiz-GFP vector were designed according to Genamics Expression software. A PCR fragment of 364 bp was
chosen for amplification which extended within the open reading frame of the recombinant GFP; from 2156 bps
into 2520 bps. PCR amplification was taken place using conventional thermal cycler (Eppendorf Master Cycler -
USA). Upstream and forward primers and DNA template were added to the PCR Super Mix. The PCR tubes
were placed on ice and all the components were added to make 50µl final reaction volume. Thirty cycles
(denaturation at 95ºC, annealing at 52 ºC, extension at 75 ºC) of amplification were performed .
Incubation of eluted and lyophilized positively charged fractions with 364bp PCR fragment: Fixed concentration
of 364bp PCR fragment was incubated with different increasing concentrations of DEAE cellulose positively
charged fractions (through 1µg, 5µg, 10µg and 15µg) for one hour at room temperature. After incubation, each
sample was analyzed by agarose gel electrophoresis (fig. 7). Picture was taken by photo documentation unit.
3. Results & Discusion
Several papers were demonstrated the inhibitory role of seminal fluid against the entry of exogenous DNA
(Lavitrano et al., 1992 and 1997; Zani et al., 1995). Several proteins were involved in this inhibition.
Accordingly, the seminal proteins that inhibit the entry of exogenous DNA should somehow bind with it. This
interaction was detected usually using radioactively labeled isotopes or other cost effective labeling method such
as foot-printing in which the DNA bound protein was retarded during its migration through PAGE compared
with its natural unbound form. DNase activity profile of rabbit’s seminal fluid after its incubation with gWizGFP
vector: Although several results were focused on the DNase activity of seminal fluid that taken from several
mammals (Carballada & Esponda, 2001), no one mentioned the existence of another activity in the same fluid. In
this study, DNA binding or retardation activity of the seminal fluid was taken into consideration .
After simple incubation of gWizGFP vector with seminal fluid, two significant groups were identified easily in
seminal fluid. The first one; was the expected DNase activity, which was highlighted as a known exogenous
DNA counterfeiting mechanism in several mammals such as mice (Carballada & Esponda, 2001), hamster
(Sotolongo et al., 2005), bulls (Tanigawa et al., 1975), human (Singer et al., 1983), and even in birds (Sato et al.,
2003). This mechanism could be described as a natural defense barrier against the entry of gWizGFP vector – or
any exogenous DNA – into the sperm cells. DNase mechanism, as it was shown in figure 1, was increased
Advances in Life Science and Technology www.iiste.org
ISSN 2224-7181 (Paper) ISSN 2225-062X (Online)
Vol.11, 2013
11
significantly as seminal fluid concentration increased with exogenous DNA. As long as DNase mechanism was
not specific one, it was not
necessary to change the type of exogenous DNA to be incubated with this fluid. Although, the exogenous DNA
used was hydrolyzed relatively with seminal fluid when the later used in low concentration, but this mean that
the seminal fluid – even with low concentration- was capable of commencing degradation of exogenous DNA.
The proportional increase in this hydrolysis was expected since some researches were indicated such activity
(Abdorrahman and Foster, 2005).
The second observed outstanding mechanism was a second group of seminal proteins owning a distinct
exogenous DNA counterfeiting mechanism. The action of this group of seminal proteins was observed even
when seminal fluid was used in low concentrations (fig. 1). This wasn’t reflecting the abundance of only DNase
activity of one seminal group, but, this reflecting the abundance of DNA binding activity of another seminal
group as well. According to our knowledge, this binding mechanism was never highlighted by any research
before this one. This could be attributed to many reasons; the first one could be represented by the field at which
seminal fluid was placed, in which, almost all researchers were concerning only on the reproduction aspects. Or,
nobody thought that simple DNA – seminal fluid incubation and direct agarose gel electrophoresis could not lead
to more than a DNA hydrolysis.
This research was not the only one demonstrated the presence of more than one activity in the seminal fluid of
mammals, since this data was demonstrated previously, without focusing on DNA incubation nature of the
positively charged seminal fractions (Carbellada & Esponda, 2001). Some papers was referred indirectly to the
occurrence of certain forms of polyamine molecules in seminal fluid (Setchell & Brooks, 1988), these molecules
were contributed somehow in the binding with exogenous DNA provided to explain how such binding was taken
place (Camaioni et al., 1992).
It was deserve to be noted that these results of clear DNase activity of seminal fluid were not in agreement with
the results obtained after incubation of porcine seminal fluid with DNA for the same time and conditions since
no significant DNase activity was observed in the seminal fluid after incubation (Horan et al., 1991). Moreover,
no DNA neutralizing ability was found in the same paper after studying the porcine seminal fluid – exogenous
DNA interaction. This may be attributed possibly to the fact that the difference in species may be responsible
about such vast different results obtained between this research and the research of Horan et al., (1991) or to
unknown reason. Since two seminal activities were identified according to figure 1, our efforts were directed
toward separation of these two activities according to their charge. It was simply speculated that the second
activity (the DNA binding activity) was represented by a positively charged group. Therefore, ion exchange
chromatography was applied to accomplish such purpose.
3.1 Ion-exchange chromatogram of rabbit seminal fluid on a DEAE-cellulose column
It was noticed that DNA binding to spermatozoa is not random process: since DNA molecules have a preferred
binding site localized in the post-acrosomal region of sperm head in most species. The main property that seems
to be regulated by the negative charge of the DNA molecule (Lavitrano et al., 1992). Although the speculated
DNA binding activity observed in rabbit’s seminal fluid was not necessary to be exclusively available only in
positively charged proteins, but, this activity was not far away from the charge aspects. It might be rational to
say that such activity was either sequence specific, or non-sequence specific. In the second case, it was possible
to include charge in this suggestion since seminal fluid, in general, was designed to prevent any outsider from
the entry inside the sperm cell. This activity, in turn, was not far away from the charge calculations because the
“natural defense” and “natural charge” characteristic features had generalized meaning instead of the specific
counterpart. DEAE cellulose ion exchanger was applied according to these aspects on seminal fluid as an
inevitable tool to separate seminal proteins on the basis of their charge (fig. 2).The direct application of the
eluted protein fractions on SDS-PAGE and the utilization of the highly sensitive silver nitrate on this gel was
answered several questions about the nature of the positively charged resolved fractions (fig. 3). This direct
application of the eluted fragments could be taken place without undergoing the classical pre-electrophoresis
spectrophotometric assay. This free-spectronic protocol was applied for several technical reasons; such as to sum
up time, which was however, a crucial factor.
Advances in Life Science and Technology www.iiste.org
ISSN 2224-7181 (Paper) ISSN 2225-062X (Online)
Vol.11, 2013
12
The direct run of the eluted fractions was capable to give more elaborated information about the nature of the
electrophoresed proteins. Added to that, this protocol was much simpler. The direct run of the eluted fractions
was capable to give more elaborated information about the nature of the analyzed proteins (Bollag et al.,
1996).Therefore, to get much more accurate data about the nature and the number of bands of the eluted fraction,
direct SDS-PAGE and silver nitrate dye were applied (Bonner, 2007). In spite of the relative differences
obtained in the SDS-PAGE resolved positively charged fractions but such differences might not be exist because
this relative difference didn’t belong to the difference in the protein profile of the resolved fractions as much as
to the difference in the development time used in silver staining kit (Fermentas) to get the desired picture of the
resolved bands (fig. 3). This suggestion was supported by the absence of any clear differences in the band profile
of all the fractions after being lyophilized (fig. 4). After the elution of all positively charged fractions of the
seminal fluid, several low molecular weight bands were not eluted with the profile of the positively charged
fractions. This profile was clear in SDS-PAGE (fig. 4) and in native-PAGE (fig. 5).
3.2 SDS – Polyacrylamide Gel Electrophoresis (SDS – PAGE) of eluted and lyophilized positively charged
fractions:
It was found that is it was necessary to visualize the lyophilized positively charged seminal proteins on one
dimentional native PAGE in addition to SDSPAGE as well (Garvin, 1990). This was done in order to completely
characterize the positively charged fractions (Marques et al., 2000). Since SDS PAGE sometimes did not give
full electrophoretic information so the deformation taken place in the proteins conformations as a result of
denaturation (Laemmli, 1970). Add to that, as it was observed (fig. 4) that there were no clear distinctions
between the profile of the whole seminal fluid profile and the profile of the eluted positively charged proteins.
That’s why further data had to be provided by directly analyzing the same fraction on a gel without losing any of
deformation.
Nondenaturing – Polyacrylamide Gel Electrophoresis (Native – PAGE) of eluted and lyophilized positively
charged fractions: More data were found in figure 5, in which much more clear distinguishing between the
positively charged fractions and the seminal fluid. These differences were clearer than differences obtained in
figure 4. Since some low molecular weight bands observed between 15kd and 20 kd were found to be absent in
the positively charged fractions compared with the whole seminal fluid profile. In figure 4, it was found a certain
ambiguity in the profile of the analyzed proteins on native PAGE. This might be attributed to the obvious
positively charged characteristic feature observed in these fractions which made the electrophoresis much more
difficult because the fierce resistance of these positively charged fractions to the electrical current applied.
Several native PAGEs before this one were failure to run these fractions because all of these lanes were analyzed
in parallel and continuous electrical current. Accordingly, as it shown in figure 5, an empty lane (lane 4) was
placed between adjacent lanes and several on – off orders were used by power supply with time interval rests to
alleviate the fierce resistance of these fractions to the electrical current applied (Westernmeier et al., 2005).
DNA binding activity profile of rabbit DEAE cellulose positively charged seminal fractions after their
incubation with gWizGFP DNA. Although the same incubation experiments shown in figure 1 were repeated on
the positively charged fractions but the result in figure 6 was different in several interesting aspects. As long as
no DNA hydrolysis happened in all lanes even with the lanes that had high concentrations of the positively
charged fractions that incubated with the same DNA concentrations, so, there was no DNase activity in all the
positively charged fractions. But the observed low level of DNA binding activity of the positively charged
fractions (fig. 6) was less than what it was observed with the intact, non-fractionated seminal fluid (fig.1). This
could be attributed to several reasons such as the loss of considerable amount of DNA binding activity during the
process of ion exchange chromatography (Villemure et al., 2003), or during the process of lyophilization
(Matejtschuk, 2007). The other reason that might explain such phenomenon was the possibility of existing of
another significant DNA binding activity on the negatively charged fractions.
Unfortunately, this site of view was never focused on during undergoing such experiments for several reasons
such as the DNase activity was a classic and non-surprising activity observed usually observed in seminal fluid
and it was not necessary to rediscover it. The second important reason of not taking negatively charged fractions
in consideration with respect to new discovered seminal DNA binding activity was the apparent DNA binding
activity observed in another DNA – seminal fluid incubation experiment (fig. 7). The number of papers that dealt
with the DNA binding ability of the chromatography separated positively charged fractions of seminal fluid were
not exist, but it was suggested that factor(s) in seminal fluid might prevent potentially dangerous molecules such
as foreign DNA (which might not be present in the genital tracts from bacterial or viral sources) from gaining
access to spermatozoa (Camaioni et al., 1992).
Advances in Life Science and Technology www.iiste.org
ISSN 2224-7181 (Paper) ISSN 2225-062X (Online)
Vol.11, 2013
13
3.3 DNA binding activity profile of rabbit DEAE cellulose positively charged seminal fractions after their
incubation with 364bp PCR fragment:
The significant DNA binding activity observed in figure 7 was very clear and don’t require extended discussion
since as much as the concentration of the positively charged fractions increase as much the retardation of the
electrophoretic movement of the bound DNA was observed. This was attributed to the electrostatic attractions or
ionic interactions taken place between DNA and proteins (Reece, 2004). But the only two things that deserve to
be mentioned was the absolute absence of any DNase activity even when very high concentrations (15µg) of the
positively charged fractions were used. The sort of
DNA retardation (fig. 7) that extended in high concentration of these fractions even to the right DNA marker
don’t represent any “specific” mode of DNA binding. This, in turn, affirms the general protective behavior
performed by such fractions as one of the inevitable barriers against the entry of any bacterial or viral agent into
the sperm cells (Camaioni et al., 1992).
Conclusion : In addition to the naturally available DNase activity of seminal fluid, there is an undiscovered
DNA binding activity available in positively charged seminal proteins. These two main activities could be
separated by ion exchange chromatography. Accordingly, exogenous DNA was not only hydrolyzed by seminal
proteins but its charge was largely neutralized by second group of seminal proteins have a positive charges in
physiological pH. According to ion exchange chromatography, seminal DNase activity is exclusive to the
negatively charged fractions.
Acknowledgements
We would like to thank Ms. Qumaria , Ms. Habiba ,and Mr.muhammed Ewadh for their support and
cooperation .
References
Alghamdi A. S., and Foster D. N. (2005). Seminal DNase Frees Spermatozoa Entangled in Neutrophil
Extracellular Traps. Biol.Reprod. 73, 1174–1181 .
Baccetti, B. and Spadafora, C, (2000). 'Conclusions'. Molecular Reproduction & Development, 56; 329-330.
Bollag D. M., Rozycki M. D., Edelstein S. J. (1996). Proteins Methods. Jhon Wiley and Sons Publications.
Bonner L R. (2007). Protein Purification (the basics). Taylor and Francis group.
Camaioni, A., Russo, M.A., Odorisio, T., Gandolfi, F., Fazio, V.M., and Siracusa, G. (1992). Uptake of
exogenous DNA by mammalian spermatozoa: Specific localization of DNA on sperm heads. Journal of
Reproduction & Fertility 961: 203-212.
Carballada R, Esponda P. (2001). Regulation of Foreign DNA Uptake by Mouse Spermatozoa. Experimental
Cell Research, 62, 104–113.
Coligan J, Kruisbeck A, Margulies D, Shevach E, Strober W. (2005). Current Protocols in Immunology. New
York: John Wiley and Sons, Inc.
Gandolfi F. (2000). Sperm-mediated transgenesis. Theriogenology, 53, 127-37.
Garvin D E. (1990). One-dimentional gel electrophoresis. From methods in enzymology, v 182, guide to protein
purification, edited by Murray P. Deutscher.
Horan R, Powell R, McQuaid S, Gannon F, Houghton J. A. (1991). Association of foreign DNA with porcine
spermatozoa. Arch Androl 26 :83-92.
Houdebine LM. (2003). Animal transgenesis and cloning. West Sussex, UK: Wiley & Sons.
Advances in Life Science and Technology www.iiste.org
ISSN 2224-7181 (Paper) ISSN 2225-062X (Online)
Vol.11, 2013
14
Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
Nature 227, 680-685.
Lauria A, Gandolfi F (1993): Recent advances in sperm cell mediated gene transfer. Molecular Reproduction &
Development 36:255–257.
Lavitrano, M., French, D., Zani, M., Frati, L., and Spadafora, C. (1992). The interaction between exogenous
DNA and sperm cells. Molecular Reproduction & Development 31: 161-169.
Lavitrano, M., Maione, B., Forte, E., Francolini, M., Sperandio, S., Testi, R. & Spadafora, C. (1997). The
interaction of sperm cells with exogenous DNA: a role of CD4 and major histocompatibility complex class II
molecules. Experimental Cell Research 233, 56—62.
Marques V A., Goulari L. R., and Silva F. (2000). Variations of protein profiles and calcium and phospholipase
A2 concentrations in thawed bovine semen and their relation to acrosome reaction. Genetics and Molecular
Biology, 23, 4, 825-829.
Matejtschuk P. Lyophilization of Proteins. (2007). From Cryopreservation and Freeze- Drying
Protocols.Methods in Molecular Biology, Second Edition.Edited by John G. Day. © 2007 Humana Press Inc.
Reece, R.J. (2004). Analysis of Genes and Genomes. John Wiley and Sons Ltd. p361-366.
Sato M, Tanigawa M, Kikuchi N, Nakamura S, Kimura M, (2003). Efficient gene delivery into murine ovarian
cells by intraovarian injection of plasmid DNA and subsequent in vivo Electroporation. Genesis 35 (3); 169–174.
Singer R, Sagiv M, Allalouf D, Levinsky H, Servadio C. (1983). Deoxyribonuclease activity in human seminal
fluid. Arch Androl; 10: 169-72.
Sotolongo B., Huang T., Isenberger E., & Ward S. (2005). An Endogenous Nuclease in Hamster, Mouse, and
Human Spermatozoa Cleaves DNA into Loop-Sized Fragments. Journal of Andrology, 26 (2); 272 – 280 .
Tanigawa Y, Yoshihara K, Koide SS. (1975). Endonuclease activity in bull semen, testis and accessory sex
organs. Biol. Reprod., 12: 464-70.
Teixeira D., Melo L., Gadelha C., Cunha R., Bloch C., Rádis-Baptista G., Cavada B., and Freitas V. (2006). Ion-
exchange chromatography used to isolate a spermadhesin-related protein from domestic goat (Capra hircus)
seminal plasma. Genetic Molecular Researches, 5 (1): 79-87.
Villemure M., Lazure C. and Manjunath P. (2003).Isolation and characterization of gelatin-binding proteins from
goatseminal plasma. Reproductive Biology and Endocrinology, 1 (39); 1 – 10 .
Westernmeier R., Gronau S., Becket P., Bulles J., Scchickle H. and Thebling G. (2005). Electrophoresis in
practice. Wiley-VCH Verlang GmbH and Co KGaA.
Zani M, Lavitrano M, French D, Lulli V, Maione B, Sperandio S, Spadafora C. (1995). The mechanism of
binding of exogenous DNA to sperm cells: factors controlling the DNA uptake. Experimental Cell Researches 2
17: 57-64.
Advances in Life Science and Technology www.iiste.org
ISSN 2224-7181 (Paper) ISSN 2225-062X (Online)
Vol.11, 2013
15
Figure 1. DNase activity profile of rabbit’s seminal fluid after its incubation with gWizGFP vector .Lane 1: 20µl size marker (Invitrogen).
Lane 2: 2µg gWizGFP DNA. Lane 3 to lane 12:10µl taken from incubation of 6µg gWizGFP DNA with (1, 2, 3, 4, 5, 6, 7, 8, 9, & 10)µl
seminal fluid. Electrophoresis conditions: agarose concentration 1%, power applied: 4.1 V / cm, time of run: 1 hr.
Figure 2. Ion-exchange chromatography of rabbit seminal fluid on a DEAE-cellulose column. The 4cm length of DEAE cellulose was
washed with 0.02 M phosphate buffer, pH 7.3, at a flow rate of 3ml/fraction. The first 3 fractions were discarded. Thus no. 1 in this diagram
refers to first fraction submitted to SDS-PAGE. Once protein concentration was reduced, linear gradient of 0 to 1 M NaCl was used to elute
negatively charge fractions. Ion exchange chromatography conditions: column type: conventional glass column, flow force: gravity, flow rate
partitioning: 3ml/tube each.
Advances in Life Science and Technology www.iiste.org
ISSN 2224-7181 (Paper) ISSN 2225-062X (Online)
Vol.11, 2013
16
Figure 3. Silver stained positively charged proteins of rabbit seminal fluid electrophoresed on SDS-PAGE after being fractionated by DEAE
anion exchanger. Lane a: protein size marker (Fermentas - 10µl). Lane b: rabbit seminal fluid (4.5µl). Lane 1 to 20: 15 µl from fraction 1 to
fraction no. 20. Lane c: protein low molecular weight marker (Amersham - 7µl). SDS PAGE electrophoresis conditions: polyacrylamide
concentration 14% separating gel and 4% stacking gel. Voltage applied: 11.54 V / cm.
run time: 75 min.
Advances in Life Science and Technology www.iiste.org
ISSN 2224-7181 (Paper) ISSN 2225-062X (Online)
Vol.11, 2013
17
Figure 4. Silver stained lyophilized positively charged proteins of rabbit seminal fluid electrophoresed on SDS-PAGE after being
fractionated by DEAE anion exchanger. Lane 1: protein size marker (Fermentas - 10µl). Lane 2: rabbit seminal fluid (4.5µl).Lane 3: fraction
number 2-5 (1µg each). Lane 4: fraction number 6-10 (1 µg each). Lane 5: fraction number 11-15 (7 µl each). Lane 6: fraction number 16-20
(1 µg each). Lane 7: protein low molecular weight lyophilized marker (Amersham - 4µl). SDS-PAGE electrophoresis conditions:
polyacrylamide concentration 14% separating gel and 4% stacking gel. Voltage applied: 11.54 V / cm. run time: 90 min.
Figure 5. Silver stained lyophilized positively charged proteins of rabbit seminal fluid electrophoresed on native-PAGE after being
fractionated by DEAE anion exchanger. Lane 1: protein low molecular weight lyophilized marker (Amersham - 4µl). Lane 2: rabbit seminal
fluid (4.5µl). Lane 3: fraction number 2-5 (10µg). Lane 4: empty. Lane 5: fraction number 6-10 (7µg). Lane 6: fraction number 11-15 (7µg).
Lane 7: fraction number 16-20 (7µg) Native-PAGE electrophoresis conditions: polyacrylamide concentration 14% separating gel and 4%
stacking gel. Voltage applied: 11.54 V / cm. run time: 90 min.
Figure 6. DNA retardation activity profile of rabbit DEAE cellulose positively charged seminal fractions after incubation of variable
concentration of these fractions with gWizGFP DNA. Lane 1: 12µl DNA size marker (Invitrogen). Lane 2: 2µg gWizGFP vector. Lane 3 to
lane 12: 2µg gWizGFP vector with (1, 2, 3, 4, 5, 6, 7, 8, 9, 10) µg of DEAE seminal fractions. Electrophoresis conditions: agarose
concentration 1%, power applied: 4.1 V / cm, time of run: 1 hr.
Advances in Life Science and Technology www.iiste.org
ISSN 2224-7181 (Paper) ISSN 2225-062X (Online)
Vol.11, 2013
18
Figure 7. DNA retardation activity profile of rabbit DEAE cellulose positively charged seminal fractions after incubation of variable
concentrations of these fractions with 364bp PCR fragment. Lane 1: 1.5µg DNA size marker (Fermentas). Lane 2: 0.5 µg 364bp PCR
fragment. Lane 3 to lane 6: 6 µg 364bp PCR fragment incubated with (1, 5, 10, 15)µg DEAE cellulose eluted positively charged proteins
respectively. Electrophoresis conditions: agarose concentration 2%, power applied: 5.5 V / cm, time of run: 1 hr.
This academic article was published by The International Institute for Science,
Technology and Education (IISTE). The IISTE is a pioneer in the Open Access
Publishing service based in the U.S. and Europe. The aim of the institute is
Accelerating Global Knowledge Sharing.
More information about the publisher can be found in the IISTE’s homepage:
http://www.iiste.org
CALL FOR JOURNAL PAPERS
The IISTE is currently hosting more than 30 peer-reviewed academic journals and
collaborating with academic institutions around the world. There’s no deadline for
submission. Prospective authors of IISTE journals can find the submission
instruction on the following page: http://www.iiste.org/journals/ The IISTE
editorial team promises to the review and publish all the qualified submissions in a
fast manner. All the journals articles are available online to the readers all over the
world without financial, legal, or technical barriers other than those inseparable from
gaining access to the internet itself. Printed version of the journals is also available
upon request of readers and authors.
MORE RESOURCES
Book publication information: http://www.iiste.org/book/
Recent conferences: http://www.iiste.org/conference/
IISTE Knowledge Sharing Partners
EBSCO, Index Copernicus, Ulrich's Periodicals Directory, JournalTOCS, PKP Open
Archives Harvester, Bielefeld Academic Search Engine, Elektronische
Zeitschriftenbibliothek EZB, Open J-Gate, OCLC WorldCat, Universe Digtial
Library , NewJour, Google Scholar

Weitere ähnliche Inhalte

Was ist angesagt?

Kit-Positive Cells in the Murine Common Bile Duct
Kit-Positive Cells in the Murine Common Bile DuctKit-Positive Cells in the Murine Common Bile Duct
Kit-Positive Cells in the Murine Common Bile Duct
ANALYTICAL AND QUANTITATIVE CYTOPATHOLOGY AND HISTOPATHOLOGY
 
Effect of human chorionic gonadotrpin (h cg)
Effect of human chorionic gonadotrpin (h cg)Effect of human chorionic gonadotrpin (h cg)
Effect of human chorionic gonadotrpin (h cg)
Hamid Ur-Rahman
 
Parafos para rise 2010
Parafos para rise 2010Parafos para rise 2010
Parafos para rise 2010
maralys colon
 
Biotechniques v30p662 SNP
Biotechniques v30p662 SNPBiotechniques v30p662 SNP
Biotechniques v30p662 SNP
Michael Weiner
 
Genomic Cytometry: Using Multi-Omic Approaches to Increase Dimensionality in ...
Genomic Cytometry: Using Multi-Omic Approaches to Increase Dimensionality in ...Genomic Cytometry: Using Multi-Omic Approaches to Increase Dimensionality in ...
Genomic Cytometry: Using Multi-Omic Approaches to Increase Dimensionality in ...
Robert (Rob) Salomon
 
Comparison of Antibacterial Activities of Cavity Disinfectants
Comparison of Antibacterial Activities of Cavity DisinfectantsComparison of Antibacterial Activities of Cavity Disinfectants
Comparison of Antibacterial Activities of Cavity Disinfectants
ANALYTICAL AND QUANTITATIVE CYTOPATHOLOGY AND HISTOPATHOLOGY
 
Christian Mueller ABIO 399 paper 12 16 15
Christian Mueller ABIO 399 paper 12 16 15Christian Mueller ABIO 399 paper 12 16 15
Christian Mueller ABIO 399 paper 12 16 15
Christian Mueller
 

Was ist angesagt? (18)

Kit-Positive Cells in the Murine Common Bile Duct
Kit-Positive Cells in the Murine Common Bile DuctKit-Positive Cells in the Murine Common Bile Duct
Kit-Positive Cells in the Murine Common Bile Duct
 
Effect of human chorionic gonadotrpin (h cg)
Effect of human chorionic gonadotrpin (h cg)Effect of human chorionic gonadotrpin (h cg)
Effect of human chorionic gonadotrpin (h cg)
 
Parafos para rise 2010
Parafos para rise 2010Parafos para rise 2010
Parafos para rise 2010
 
Differentiation & Activity Of Human Pre-Osteoclasts On Chitosan-Ashish Sh...
Differentiation & Activity Of Human Pre-Osteoclasts On Chitosan-Ashish Sh...Differentiation & Activity Of Human Pre-Osteoclasts On Chitosan-Ashish Sh...
Differentiation & Activity Of Human Pre-Osteoclasts On Chitosan-Ashish Sh...
 
Poster
PosterPoster
Poster
 
Biotechniques v30p662 SNP
Biotechniques v30p662 SNPBiotechniques v30p662 SNP
Biotechniques v30p662 SNP
 
Automacs pro talk @ Garvan Flow
Automacs pro talk @ Garvan FlowAutomacs pro talk @ Garvan Flow
Automacs pro talk @ Garvan Flow
 
Radiation Response of Bacteria Associated with Human Cancellous Bone
Radiation Response of Bacteria Associated with Human Cancellous BoneRadiation Response of Bacteria Associated with Human Cancellous Bone
Radiation Response of Bacteria Associated with Human Cancellous Bone
 
s basak cv
s basak cvs basak cv
s basak cv
 
Genomic Cytometry: Using Multi-Omic Approaches to Increase Dimensionality in ...
Genomic Cytometry: Using Multi-Omic Approaches to Increase Dimensionality in ...Genomic Cytometry: Using Multi-Omic Approaches to Increase Dimensionality in ...
Genomic Cytometry: Using Multi-Omic Approaches to Increase Dimensionality in ...
 
Cladman wendy cv 2012
Cladman wendy  cv 2012Cladman wendy  cv 2012
Cladman wendy cv 2012
 
Cladman wendy cv and addendum 2012
Cladman wendy  cv and addendum 2012Cladman wendy  cv and addendum 2012
Cladman wendy cv and addendum 2012
 
jbmr
jbmrjbmr
jbmr
 
Genotoxicity Evaluation of Polystyrene Membrane with Collagen and Norbixin by...
Genotoxicity Evaluation of Polystyrene Membrane with Collagen and Norbixin by...Genotoxicity Evaluation of Polystyrene Membrane with Collagen and Norbixin by...
Genotoxicity Evaluation of Polystyrene Membrane with Collagen and Norbixin by...
 
ORIP Presentation 2012
ORIP Presentation 2012ORIP Presentation 2012
ORIP Presentation 2012
 
Comparison of Antibacterial Activities of Cavity Disinfectants
Comparison of Antibacterial Activities of Cavity DisinfectantsComparison of Antibacterial Activities of Cavity Disinfectants
Comparison of Antibacterial Activities of Cavity Disinfectants
 
Christian Mueller ABIO 399 paper 12 16 15
Christian Mueller ABIO 399 paper 12 16 15Christian Mueller ABIO 399 paper 12 16 15
Christian Mueller ABIO 399 paper 12 16 15
 
gupea_2077_38173_5
gupea_2077_38173_5gupea_2077_38173_5
gupea_2077_38173_5
 

Ähnlich wie Ion exchange fractionation of rabbits seminal fluid

Isolation and characterization of coprophilous cellulolytic fungi from asian ...
Isolation and characterization of coprophilous cellulolytic fungi from asian ...Isolation and characterization of coprophilous cellulolytic fungi from asian ...
Isolation and characterization of coprophilous cellulolytic fungi from asian ...
Alexander Decker
 
2014_BKCS_기생충
2014_BKCS_기생충2014_BKCS_기생충
2014_BKCS_기생충
Je-Hyun Baek
 
Kariuki practical report
Kariuki  practical reportKariuki  practical report
Kariuki practical report
Samuel Kariuki
 
Genome sequencing in vegetable crops
Genome sequencing in vegetable cropsGenome sequencing in vegetable crops
Genome sequencing in vegetable crops
Bommesh
 
Analysis of myc antibody specificity
Analysis of myc antibody specificityAnalysis of myc antibody specificity
Analysis of myc antibody specificity
Cameron McInnes
 
The acute liver injury in rat caused by gold nanoparticles
The acute liver injury in rat caused by gold nanoparticlesThe acute liver injury in rat caused by gold nanoparticles
The acute liver injury in rat caused by gold nanoparticles
Nanomedicine Journal (NMJ)
 
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian CellsGenotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
inventionjournals
 
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian CellsGenotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
inventionjournals
 
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian CellsGenotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
inventionjournals
 

Ähnlich wie Ion exchange fractionation of rabbits seminal fluid (20)

Dna extraction from molluscs -Jackson chary
Dna extraction from molluscs -Jackson charyDna extraction from molluscs -Jackson chary
Dna extraction from molluscs -Jackson chary
 
Isolation and characterization of coprophilous cellulolytic fungi from asian ...
Isolation and characterization of coprophilous cellulolytic fungi from asian ...Isolation and characterization of coprophilous cellulolytic fungi from asian ...
Isolation and characterization of coprophilous cellulolytic fungi from asian ...
 
Final
FinalFinal
Final
 
ISOLATION OF DNA FROM BACTERIAL CELL 1.pptx
ISOLATION OF DNA FROM BACTERIAL CELL 1.pptxISOLATION OF DNA FROM BACTERIAL CELL 1.pptx
ISOLATION OF DNA FROM BACTERIAL CELL 1.pptx
 
Dna hydrogel microspheres and their potential applications for protein delive...
Dna hydrogel microspheres and their potential applications for protein delive...Dna hydrogel microspheres and their potential applications for protein delive...
Dna hydrogel microspheres and their potential applications for protein delive...
 
5 mohammad chamani
5 mohammad chamani5 mohammad chamani
5 mohammad chamani
 
2014_BKCS_기생충
2014_BKCS_기생충2014_BKCS_기생충
2014_BKCS_기생충
 
Kariuki practical report
Kariuki  practical reportKariuki  practical report
Kariuki practical report
 
J0361058062
J0361058062J0361058062
J0361058062
 
screening model for Parkinson's disease.pptx
screening model for Parkinson's disease.pptxscreening model for Parkinson's disease.pptx
screening model for Parkinson's disease.pptx
 
Protein Chromatography
Protein ChromatographyProtein Chromatography
Protein Chromatography
 
Comparison of different dna extraction methods for forensic samples
Comparison of different dna extraction methods for forensic samplesComparison of different dna extraction methods for forensic samples
Comparison of different dna extraction methods for forensic samples
 
Gene transfer in animals
Gene transfer in animalsGene transfer in animals
Gene transfer in animals
 
2015 new phytol mazzoleni et al
2015 new phytol mazzoleni et al2015 new phytol mazzoleni et al
2015 new phytol mazzoleni et al
 
Genome sequencing in vegetable crops
Genome sequencing in vegetable cropsGenome sequencing in vegetable crops
Genome sequencing in vegetable crops
 
Analysis of myc antibody specificity
Analysis of myc antibody specificityAnalysis of myc antibody specificity
Analysis of myc antibody specificity
 
The acute liver injury in rat caused by gold nanoparticles
The acute liver injury in rat caused by gold nanoparticlesThe acute liver injury in rat caused by gold nanoparticles
The acute liver injury in rat caused by gold nanoparticles
 
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian CellsGenotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
 
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian CellsGenotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
 
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian CellsGenotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
Genotoxicity of Goji Berry (Lyciumbarbarum) In Vivo Mammalian Cells
 

Mehr von Alexander Decker

Abnormalities of hormones and inflammatory cytokines in women affected with p...
Abnormalities of hormones and inflammatory cytokines in women affected with p...Abnormalities of hormones and inflammatory cytokines in women affected with p...
Abnormalities of hormones and inflammatory cytokines in women affected with p...
Alexander Decker
 
A usability evaluation framework for b2 c e commerce websites
A usability evaluation framework for b2 c e commerce websitesA usability evaluation framework for b2 c e commerce websites
A usability evaluation framework for b2 c e commerce websites
Alexander Decker
 
A universal model for managing the marketing executives in nigerian banks
A universal model for managing the marketing executives in nigerian banksA universal model for managing the marketing executives in nigerian banks
A universal model for managing the marketing executives in nigerian banks
Alexander Decker
 
A unique common fixed point theorems in generalized d
A unique common fixed point theorems in generalized dA unique common fixed point theorems in generalized d
A unique common fixed point theorems in generalized d
Alexander Decker
 
A trends of salmonella and antibiotic resistance
A trends of salmonella and antibiotic resistanceA trends of salmonella and antibiotic resistance
A trends of salmonella and antibiotic resistance
Alexander Decker
 
A transformational generative approach towards understanding al-istifham
A transformational  generative approach towards understanding al-istifhamA transformational  generative approach towards understanding al-istifham
A transformational generative approach towards understanding al-istifham
Alexander Decker
 
A time series analysis of the determinants of savings in namibia
A time series analysis of the determinants of savings in namibiaA time series analysis of the determinants of savings in namibia
A time series analysis of the determinants of savings in namibia
Alexander Decker
 
A therapy for physical and mental fitness of school children
A therapy for physical and mental fitness of school childrenA therapy for physical and mental fitness of school children
A therapy for physical and mental fitness of school children
Alexander Decker
 
A theory of efficiency for managing the marketing executives in nigerian banks
A theory of efficiency for managing the marketing executives in nigerian banksA theory of efficiency for managing the marketing executives in nigerian banks
A theory of efficiency for managing the marketing executives in nigerian banks
Alexander Decker
 
A systematic evaluation of link budget for
A systematic evaluation of link budget forA systematic evaluation of link budget for
A systematic evaluation of link budget for
Alexander Decker
 
A synthetic review of contraceptive supplies in punjab
A synthetic review of contraceptive supplies in punjabA synthetic review of contraceptive supplies in punjab
A synthetic review of contraceptive supplies in punjab
Alexander Decker
 
A synthesis of taylor’s and fayol’s management approaches for managing market...
A synthesis of taylor’s and fayol’s management approaches for managing market...A synthesis of taylor’s and fayol’s management approaches for managing market...
A synthesis of taylor’s and fayol’s management approaches for managing market...
Alexander Decker
 
A survey paper on sequence pattern mining with incremental
A survey paper on sequence pattern mining with incrementalA survey paper on sequence pattern mining with incremental
A survey paper on sequence pattern mining with incremental
Alexander Decker
 
A survey on live virtual machine migrations and its techniques
A survey on live virtual machine migrations and its techniquesA survey on live virtual machine migrations and its techniques
A survey on live virtual machine migrations and its techniques
Alexander Decker
 
A survey on data mining and analysis in hadoop and mongo db
A survey on data mining and analysis in hadoop and mongo dbA survey on data mining and analysis in hadoop and mongo db
A survey on data mining and analysis in hadoop and mongo db
Alexander Decker
 
A survey on challenges to the media cloud
A survey on challenges to the media cloudA survey on challenges to the media cloud
A survey on challenges to the media cloud
Alexander Decker
 
A survey of provenance leveraged
A survey of provenance leveragedA survey of provenance leveraged
A survey of provenance leveraged
Alexander Decker
 
A survey of private equity investments in kenya
A survey of private equity investments in kenyaA survey of private equity investments in kenya
A survey of private equity investments in kenya
Alexander Decker
 
A study to measures the financial health of
A study to measures the financial health ofA study to measures the financial health of
A study to measures the financial health of
Alexander Decker
 

Mehr von Alexander Decker (20)

Abnormalities of hormones and inflammatory cytokines in women affected with p...
Abnormalities of hormones and inflammatory cytokines in women affected with p...Abnormalities of hormones and inflammatory cytokines in women affected with p...
Abnormalities of hormones and inflammatory cytokines in women affected with p...
 
A validation of the adverse childhood experiences scale in
A validation of the adverse childhood experiences scale inA validation of the adverse childhood experiences scale in
A validation of the adverse childhood experiences scale in
 
A usability evaluation framework for b2 c e commerce websites
A usability evaluation framework for b2 c e commerce websitesA usability evaluation framework for b2 c e commerce websites
A usability evaluation framework for b2 c e commerce websites
 
A universal model for managing the marketing executives in nigerian banks
A universal model for managing the marketing executives in nigerian banksA universal model for managing the marketing executives in nigerian banks
A universal model for managing the marketing executives in nigerian banks
 
A unique common fixed point theorems in generalized d
A unique common fixed point theorems in generalized dA unique common fixed point theorems in generalized d
A unique common fixed point theorems in generalized d
 
A trends of salmonella and antibiotic resistance
A trends of salmonella and antibiotic resistanceA trends of salmonella and antibiotic resistance
A trends of salmonella and antibiotic resistance
 
A transformational generative approach towards understanding al-istifham
A transformational  generative approach towards understanding al-istifhamA transformational  generative approach towards understanding al-istifham
A transformational generative approach towards understanding al-istifham
 
A time series analysis of the determinants of savings in namibia
A time series analysis of the determinants of savings in namibiaA time series analysis of the determinants of savings in namibia
A time series analysis of the determinants of savings in namibia
 
A therapy for physical and mental fitness of school children
A therapy for physical and mental fitness of school childrenA therapy for physical and mental fitness of school children
A therapy for physical and mental fitness of school children
 
A theory of efficiency for managing the marketing executives in nigerian banks
A theory of efficiency for managing the marketing executives in nigerian banksA theory of efficiency for managing the marketing executives in nigerian banks
A theory of efficiency for managing the marketing executives in nigerian banks
 
A systematic evaluation of link budget for
A systematic evaluation of link budget forA systematic evaluation of link budget for
A systematic evaluation of link budget for
 
A synthetic review of contraceptive supplies in punjab
A synthetic review of contraceptive supplies in punjabA synthetic review of contraceptive supplies in punjab
A synthetic review of contraceptive supplies in punjab
 
A synthesis of taylor’s and fayol’s management approaches for managing market...
A synthesis of taylor’s and fayol’s management approaches for managing market...A synthesis of taylor’s and fayol’s management approaches for managing market...
A synthesis of taylor’s and fayol’s management approaches for managing market...
 
A survey paper on sequence pattern mining with incremental
A survey paper on sequence pattern mining with incrementalA survey paper on sequence pattern mining with incremental
A survey paper on sequence pattern mining with incremental
 
A survey on live virtual machine migrations and its techniques
A survey on live virtual machine migrations and its techniquesA survey on live virtual machine migrations and its techniques
A survey on live virtual machine migrations and its techniques
 
A survey on data mining and analysis in hadoop and mongo db
A survey on data mining and analysis in hadoop and mongo dbA survey on data mining and analysis in hadoop and mongo db
A survey on data mining and analysis in hadoop and mongo db
 
A survey on challenges to the media cloud
A survey on challenges to the media cloudA survey on challenges to the media cloud
A survey on challenges to the media cloud
 
A survey of provenance leveraged
A survey of provenance leveragedA survey of provenance leveraged
A survey of provenance leveraged
 
A survey of private equity investments in kenya
A survey of private equity investments in kenyaA survey of private equity investments in kenya
A survey of private equity investments in kenya
 
A study to measures the financial health of
A study to measures the financial health ofA study to measures the financial health of
A study to measures the financial health of
 

Kürzlich hochgeladen

Histor y of HAM Radio presentation slide
Histor y of HAM Radio presentation slideHistor y of HAM Radio presentation slide
Histor y of HAM Radio presentation slide
vu2urc
 
EIS-Webinar-Prompt-Knowledge-Eng-2024-04-08.pptx
EIS-Webinar-Prompt-Knowledge-Eng-2024-04-08.pptxEIS-Webinar-Prompt-Knowledge-Eng-2024-04-08.pptx
EIS-Webinar-Prompt-Knowledge-Eng-2024-04-08.pptx
Earley Information Science
 
CNv6 Instructor Chapter 6 Quality of Service
CNv6 Instructor Chapter 6 Quality of ServiceCNv6 Instructor Chapter 6 Quality of Service
CNv6 Instructor Chapter 6 Quality of Service
giselly40
 
IAC 2024 - IA Fast Track to Search Focused AI Solutions
IAC 2024 - IA Fast Track to Search Focused AI SolutionsIAC 2024 - IA Fast Track to Search Focused AI Solutions
IAC 2024 - IA Fast Track to Search Focused AI Solutions
Enterprise Knowledge
 

Kürzlich hochgeladen (20)

Histor y of HAM Radio presentation slide
Histor y of HAM Radio presentation slideHistor y of HAM Radio presentation slide
Histor y of HAM Radio presentation slide
 
EIS-Webinar-Prompt-Knowledge-Eng-2024-04-08.pptx
EIS-Webinar-Prompt-Knowledge-Eng-2024-04-08.pptxEIS-Webinar-Prompt-Knowledge-Eng-2024-04-08.pptx
EIS-Webinar-Prompt-Knowledge-Eng-2024-04-08.pptx
 
[2024]Digital Global Overview Report 2024 Meltwater.pdf
[2024]Digital Global Overview Report 2024 Meltwater.pdf[2024]Digital Global Overview Report 2024 Meltwater.pdf
[2024]Digital Global Overview Report 2024 Meltwater.pdf
 
04-2024-HHUG-Sales-and-Marketing-Alignment.pptx
04-2024-HHUG-Sales-and-Marketing-Alignment.pptx04-2024-HHUG-Sales-and-Marketing-Alignment.pptx
04-2024-HHUG-Sales-and-Marketing-Alignment.pptx
 
CNv6 Instructor Chapter 6 Quality of Service
CNv6 Instructor Chapter 6 Quality of ServiceCNv6 Instructor Chapter 6 Quality of Service
CNv6 Instructor Chapter 6 Quality of Service
 
The Codex of Business Writing Software for Real-World Solutions 2.pptx
The Codex of Business Writing Software for Real-World Solutions 2.pptxThe Codex of Business Writing Software for Real-World Solutions 2.pptx
The Codex of Business Writing Software for Real-World Solutions 2.pptx
 
Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...
Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...
Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...
 
Boost PC performance: How more available memory can improve productivity
Boost PC performance: How more available memory can improve productivityBoost PC performance: How more available memory can improve productivity
Boost PC performance: How more available memory can improve productivity
 
Slack Application Development 101 Slides
Slack Application Development 101 SlidesSlack Application Development 101 Slides
Slack Application Development 101 Slides
 
IAC 2024 - IA Fast Track to Search Focused AI Solutions
IAC 2024 - IA Fast Track to Search Focused AI SolutionsIAC 2024 - IA Fast Track to Search Focused AI Solutions
IAC 2024 - IA Fast Track to Search Focused AI Solutions
 
How to Troubleshoot Apps for the Modern Connected Worker
How to Troubleshoot Apps for the Modern Connected WorkerHow to Troubleshoot Apps for the Modern Connected Worker
How to Troubleshoot Apps for the Modern Connected Worker
 
Scaling API-first – The story of a global engineering organization
Scaling API-first – The story of a global engineering organizationScaling API-first – The story of a global engineering organization
Scaling API-first – The story of a global engineering organization
 
Finology Group – Insurtech Innovation Award 2024
Finology Group – Insurtech Innovation Award 2024Finology Group – Insurtech Innovation Award 2024
Finology Group – Insurtech Innovation Award 2024
 
Breaking the Kubernetes Kill Chain: Host Path Mount
Breaking the Kubernetes Kill Chain: Host Path MountBreaking the Kubernetes Kill Chain: Host Path Mount
Breaking the Kubernetes Kill Chain: Host Path Mount
 
A Call to Action for Generative AI in 2024
A Call to Action for Generative AI in 2024A Call to Action for Generative AI in 2024
A Call to Action for Generative AI in 2024
 
Bajaj Allianz Life Insurance Company - Insurer Innovation Award 2024
Bajaj Allianz Life Insurance Company - Insurer Innovation Award 2024Bajaj Allianz Life Insurance Company - Insurer Innovation Award 2024
Bajaj Allianz Life Insurance Company - Insurer Innovation Award 2024
 
From Event to Action: Accelerate Your Decision Making with Real-Time Automation
From Event to Action: Accelerate Your Decision Making with Real-Time AutomationFrom Event to Action: Accelerate Your Decision Making with Real-Time Automation
From Event to Action: Accelerate Your Decision Making with Real-Time Automation
 
A Domino Admins Adventures (Engage 2024)
A Domino Admins Adventures (Engage 2024)A Domino Admins Adventures (Engage 2024)
A Domino Admins Adventures (Engage 2024)
 
2024: Domino Containers - The Next Step. News from the Domino Container commu...
2024: Domino Containers - The Next Step. News from the Domino Container commu...2024: Domino Containers - The Next Step. News from the Domino Container commu...
2024: Domino Containers - The Next Step. News from the Domino Container commu...
 
Workshop - Best of Both Worlds_ Combine KG and Vector search for enhanced R...
Workshop - Best of Both Worlds_ Combine  KG and Vector search for  enhanced R...Workshop - Best of Both Worlds_ Combine  KG and Vector search for  enhanced R...
Workshop - Best of Both Worlds_ Combine KG and Vector search for enhanced R...
 

Ion exchange fractionation of rabbits seminal fluid

  • 1. Advances in Life Science and Technology www.iiste.org ISSN 2224-7181 (Paper) ISSN 2225-062X (Online) Vol.11, 2013 8 Ion Exchange Fractionation of Rabbits Seminal Fluid: Recognizing a DNA Retardation Activity from the Main DNase Activity Mohammed Baqur Al-Shuhaib1 , Ali Al-Saadi2 , Mahanem Noor3 , Mufeed Ewadh4* 1. Department of Biology – College of science for Women – University of Babylon 2. Department of Biology – College of Science – University of Babylon 3. School of Biosciences and Biotechnology – Faculty of Science and Technology – University Kebangsaan Malaysia (UKM) 4. Department of Clinical BioChemistry – College of Medicine – University of Babylon . * Email: mewadh@yahoo.com Abstract The role of seminal proteins charge on the nature of seminal fluid inhibitory effect that exerted against exogenous DNA. Has been identified and an approach closely with more details to the nature of inhibitory activities available in rabbit seminal fluid proteins that prevent the entry of exogenous DNA into the head of sperm. After collection of rabbit’s ejaculate and removing sperm cells, seminal fluid was incubated with fixed concentration of exogenous DNA. The seminal fluid – exogenous DNA mixture was analyzed by electrophoresis. Ion exchange chromatography was used to separate seminal proteins on the basis of their charge. Positively charged proteins were eluted, lyophilized, and their profile was characterized by SDS-PAGE and native-PAGE. After incubation of this eluted group with the same source of DNA, the same electrophoretic conditions were applied on this group. According to our knowledge, this is the first paper in which ion exchange chromatography was used to separate two DNA counterfeiting activities of the seminal fluid using non-radioactive method in rabbits and even in other mammals. Thus, more than one inhibitory activity were identified and separated. DNA retardation activity (or DNA binding activity) which repressed DNA electrophoretic migration was the only activity that found to be available on the positively charged fractions while the DNase activity was found exclusively on the negatively charged group. Key words : Seminal fluid , transgenesis techniques , DNA electrophoretic migration , DNase 1.Introduction In addition to the main line of elucidating transgenesis techniques through sperm mediated gene transfer (SMGT), there was a parallel line of considerable importance with this field which was represented by the understanding the molecular level of the protective mode taken from the seminal proteins to prevent the entry of exogenous DNA .It was demonstrated that certain factor(s) in seminal fluid were found to be responsible about inhibiting the internalization process of exogenous DNA (Zani et al., 2005). The fact which refers to the existence of one or more factors in seminal fluid that able to block sperm permeability must be taken into account. This means, extensive washing steps of ejaculate to remove seminal fluid is necessary and should be made before incubating sperm with exogenous DNA. Lauria and Gandolfi reviewed that seminal fluid inhibitors have two ways of inhibition to exogenous DNA, either directly or indirectly (Lauria & Gandolfi, 1993). These seminal fluid inhibitory factors may prevent transfection of intact sperm by foreign DNA (Camaione et al., 1992). Gandolfi showed that there is a consensus on the experiments made on seminal fluid of the ejaculated spermatozoa of mammals in the impermeability of sperm cell to the aggression of foreign DNA as long as seminal fluid is not removed (Gandolfi, 2000).We think that this route of research is not less important than the main route since as much as researchers get more understanding to the nature of seminal proteins as much as they will be more close to elucidate all the natural facts that hamper the enhancement of SMGT. Aim of study : This work is to evaluate seminal fluid natural defense mechanisms equally with the transgene entry mechanisms . 2. Materials & Methods 2.1 Materials Kit; PCR SuperMix (Invitrogen – Cat. # 0572-014), PageSilver™ Silver Staining Kit (Fermentas - Cat # K0681), Ladders; TrackIt™ 1 Kb Plus DNA Ladder (Invitrogen – Cat. #10488090), DNA size
  • 2. Advances in Life Science and Technology www.iiste.org ISSN 2224-7181 (Paper) ISSN 2225-062X (Online) Vol.11, 2013 9 marker; MassRuler™DNA Ladder Mix (Fermentas – Cat. # SM0403), Protein size Markers; PageRuler™ Unstained Broad Range Protein Ladder (Fermentas – Cat # 1881), Protein low molecular weight size marker (Amersham – code: 17-0446-01), Oligos; Forward primer (5´–CCATGCCCGAAGGTTATGTA–3´)and reverse primer (5´– GAAAGGGCAGATTGTGTGGA –3´) Invitrogen. Vector; gWiz-GFP (green fluorescent protein) vector (Aldevron – Cat. # 5006). 2.2 Experimental Animals: Eight New Zeeland sexually mature healthy white rabbits were included in this study. New Zeeland white rabbits were raised in the animal house in the school of bioscience and biotechnology/FST/UKM. They were individually housed under controlled conditions of temperature (19 – 21 ͦ C) and standard artificial light (12 hour light and 12 hours dark). A diet of grower rabbits pellets (ad libitum) and fresh water was provided. Animals were cared according to international standards management established for the care and use of laboratory animals in facilities approved by the University Kebangsaan Malaysia Animal Ethics Committee (UKMAEC). 2.3 Methods Collection of seminal fluid: Sperm was collected by home-made artificial vagina. Seminal fluid was separated from sperm cells by single centrifugation step . 2.3.1 Exogenous DNA - seminal fluid incubation: gWizGFP ( 6µg) vector was incubated with increasing concentrations of rabbit’s seminal fluid (ranging from 1 to 10µl) and completed to 30µl with sterile deionized water. The incubation was lasted for 60 min at room temperature. Mixtures were analyzed by agarose gel electrophoresis (fig. 1). 2.3.2 Fractionation with ion exchange chromatography (IEC): Seminal fluid proteins were fractionated according to Teixereira et al., 2006 and Villemure et al., 2003 with modifications 2.3.2.1 Resin selection: DEAE cellulose (5 g) (Sigma Aldrich – USA) was applied as anion exchanger for rabbit seminal fluid fractionation . 2.3.2.2 Regeneration of DEAE-cellulose: Preparative steps were conducted in 500ml capacity flask. DEAE- cellulose (anion exchanger) was purchased from Sigma. 5 g DEAE-cellulose was slowly added to 300 ml 0.1M sodium hydroxide with gentle stirrer for 30 min (pH reached to 13). The sodium hydroxide solution was discarded and the resin was washed with double distilled water until pH reached to pH 8.0. Then the solution was replaced with 0.1 M hydrochloric acid with stirring for 30 min (pH reached to 1.0). The resin was washed with double distilled water until pH reached to 3.0. The distilled water was discarded and replaced with 500mM 10X tris buffer pH 8.0 with stirring for 30 min. The 10X buffer was discarded and then the resin was equilibrated with 50 mM tris HCl pH 8.0. After removing more fines, the suspension of DEAE-cellulose resin was transferred into a glass column (2x20 Bio-Rad – USA). Length of resin after its packing with 0.01M PBS was only 4cm. the packed resin was stored in 4ºC until loading samples . 2.3.2.3 Loading sample: The pH of DEAE cellulose effluent was checked up before seminal fluid was applied. Gravity flow was applied. One ml of seminal fluid containing 3mg of protein was dissolved in 0.02 M phosphate buffer, pH 7.3, and loaded onto an ion exchange chromatography column (DEAE-cellulose, 2 x 20 cm), which was previously equilibrated with the same buffer . 2.3.2.4 Elution of positively charged proteins: The column was washed and eluted with 0.01M phosphate buffer pH 7.3. The column effluent was collected with manual fractionation, 3ml per fraction (fig. 2). Protein concentrations were spectrophotometrically determined (Spectrophotometer – Shimadzu/Japan). According to proteins concentration measurement data, the first three fractions were discarded. SDS – Polyacrylamide Gel Electrophoresis (SDS – PAGE) of the other eluted positively charged proteins was taken place (fig. 3). Laemmli
  • 3. Advances in Life Science and Technology www.iiste.org ISSN 2224-7181 (Paper) ISSN 2225-062X (Online) Vol.11, 2013 10 discontinuous method (Laemmli, 1970) for protein electrophoresis was considered, gel dimensions were 10-cm wide by 8-cm long and 0.1-cm thick (provided by Bio-Rad – USA). The resolving gel concentration used in these experiments was 14%. While the stacking gel concentration was 4%. Silver Staining was taken place according to Fermentas instruction manual (Cat # K0681). Picture was taken by 7.2 Mp digital camera (Sony – China). 2.3.2.5 Elution of negatively charged proteins: After eluting of positively charged proteins, the other proteins were eluted from the glass column with 100ml linear gradient of 0-1M NaCl in 0.01M phosphate buffered saline. Protein concentrations were spectrophotometrically determined (fig. 2). 2.3.2.6 Lyophilization of positively charged rabbit’s seminal fluid protein fractions: Each five fractions 1 to 5, 6 to 10, 11 to 15, and 16 to 20 were freeze dried (Lyotrap – UK) and SDS-PAGE (figure 4) and native PAGE (figure 5) were performed for these fractions (fig. 3). Gels were stained by silver nitrate. Pictures were taken by 7.2 Mp digital camera (Sony – China). Incubation of eluted and lyophilized positively charged fractions with gWizGFP vector: Fixed concentration (2µg) of gWizGFP DNA was incubated with variable concentrations of DEAE cellulose positively charged fractions (ranging from 1µl to 10µl) for one hour at room temperature. After incubation, each sample was analyzed by agarose gel electrophoresis (fig. 6). Picture was taken by photodocumentation unit (Alpha Innotech – USA). PCR primers design for gWizGFP gene: Two specific primers for the transgene green fluorescent protein (GFP) in gWiz-GFP vector were designed according to Genamics Expression software. A PCR fragment of 364 bp was chosen for amplification which extended within the open reading frame of the recombinant GFP; from 2156 bps into 2520 bps. PCR amplification was taken place using conventional thermal cycler (Eppendorf Master Cycler - USA). Upstream and forward primers and DNA template were added to the PCR Super Mix. The PCR tubes were placed on ice and all the components were added to make 50µl final reaction volume. Thirty cycles (denaturation at 95ºC, annealing at 52 ºC, extension at 75 ºC) of amplification were performed . Incubation of eluted and lyophilized positively charged fractions with 364bp PCR fragment: Fixed concentration of 364bp PCR fragment was incubated with different increasing concentrations of DEAE cellulose positively charged fractions (through 1µg, 5µg, 10µg and 15µg) for one hour at room temperature. After incubation, each sample was analyzed by agarose gel electrophoresis (fig. 7). Picture was taken by photo documentation unit. 3. Results & Discusion Several papers were demonstrated the inhibitory role of seminal fluid against the entry of exogenous DNA (Lavitrano et al., 1992 and 1997; Zani et al., 1995). Several proteins were involved in this inhibition. Accordingly, the seminal proteins that inhibit the entry of exogenous DNA should somehow bind with it. This interaction was detected usually using radioactively labeled isotopes or other cost effective labeling method such as foot-printing in which the DNA bound protein was retarded during its migration through PAGE compared with its natural unbound form. DNase activity profile of rabbit’s seminal fluid after its incubation with gWizGFP vector: Although several results were focused on the DNase activity of seminal fluid that taken from several mammals (Carballada & Esponda, 2001), no one mentioned the existence of another activity in the same fluid. In this study, DNA binding or retardation activity of the seminal fluid was taken into consideration . After simple incubation of gWizGFP vector with seminal fluid, two significant groups were identified easily in seminal fluid. The first one; was the expected DNase activity, which was highlighted as a known exogenous DNA counterfeiting mechanism in several mammals such as mice (Carballada & Esponda, 2001), hamster (Sotolongo et al., 2005), bulls (Tanigawa et al., 1975), human (Singer et al., 1983), and even in birds (Sato et al., 2003). This mechanism could be described as a natural defense barrier against the entry of gWizGFP vector – or any exogenous DNA – into the sperm cells. DNase mechanism, as it was shown in figure 1, was increased
  • 4. Advances in Life Science and Technology www.iiste.org ISSN 2224-7181 (Paper) ISSN 2225-062X (Online) Vol.11, 2013 11 significantly as seminal fluid concentration increased with exogenous DNA. As long as DNase mechanism was not specific one, it was not necessary to change the type of exogenous DNA to be incubated with this fluid. Although, the exogenous DNA used was hydrolyzed relatively with seminal fluid when the later used in low concentration, but this mean that the seminal fluid – even with low concentration- was capable of commencing degradation of exogenous DNA. The proportional increase in this hydrolysis was expected since some researches were indicated such activity (Abdorrahman and Foster, 2005). The second observed outstanding mechanism was a second group of seminal proteins owning a distinct exogenous DNA counterfeiting mechanism. The action of this group of seminal proteins was observed even when seminal fluid was used in low concentrations (fig. 1). This wasn’t reflecting the abundance of only DNase activity of one seminal group, but, this reflecting the abundance of DNA binding activity of another seminal group as well. According to our knowledge, this binding mechanism was never highlighted by any research before this one. This could be attributed to many reasons; the first one could be represented by the field at which seminal fluid was placed, in which, almost all researchers were concerning only on the reproduction aspects. Or, nobody thought that simple DNA – seminal fluid incubation and direct agarose gel electrophoresis could not lead to more than a DNA hydrolysis. This research was not the only one demonstrated the presence of more than one activity in the seminal fluid of mammals, since this data was demonstrated previously, without focusing on DNA incubation nature of the positively charged seminal fractions (Carbellada & Esponda, 2001). Some papers was referred indirectly to the occurrence of certain forms of polyamine molecules in seminal fluid (Setchell & Brooks, 1988), these molecules were contributed somehow in the binding with exogenous DNA provided to explain how such binding was taken place (Camaioni et al., 1992). It was deserve to be noted that these results of clear DNase activity of seminal fluid were not in agreement with the results obtained after incubation of porcine seminal fluid with DNA for the same time and conditions since no significant DNase activity was observed in the seminal fluid after incubation (Horan et al., 1991). Moreover, no DNA neutralizing ability was found in the same paper after studying the porcine seminal fluid – exogenous DNA interaction. This may be attributed possibly to the fact that the difference in species may be responsible about such vast different results obtained between this research and the research of Horan et al., (1991) or to unknown reason. Since two seminal activities were identified according to figure 1, our efforts were directed toward separation of these two activities according to their charge. It was simply speculated that the second activity (the DNA binding activity) was represented by a positively charged group. Therefore, ion exchange chromatography was applied to accomplish such purpose. 3.1 Ion-exchange chromatogram of rabbit seminal fluid on a DEAE-cellulose column It was noticed that DNA binding to spermatozoa is not random process: since DNA molecules have a preferred binding site localized in the post-acrosomal region of sperm head in most species. The main property that seems to be regulated by the negative charge of the DNA molecule (Lavitrano et al., 1992). Although the speculated DNA binding activity observed in rabbit’s seminal fluid was not necessary to be exclusively available only in positively charged proteins, but, this activity was not far away from the charge aspects. It might be rational to say that such activity was either sequence specific, or non-sequence specific. In the second case, it was possible to include charge in this suggestion since seminal fluid, in general, was designed to prevent any outsider from the entry inside the sperm cell. This activity, in turn, was not far away from the charge calculations because the “natural defense” and “natural charge” characteristic features had generalized meaning instead of the specific counterpart. DEAE cellulose ion exchanger was applied according to these aspects on seminal fluid as an inevitable tool to separate seminal proteins on the basis of their charge (fig. 2).The direct application of the eluted protein fractions on SDS-PAGE and the utilization of the highly sensitive silver nitrate on this gel was answered several questions about the nature of the positively charged resolved fractions (fig. 3). This direct application of the eluted fragments could be taken place without undergoing the classical pre-electrophoresis spectrophotometric assay. This free-spectronic protocol was applied for several technical reasons; such as to sum up time, which was however, a crucial factor.
  • 5. Advances in Life Science and Technology www.iiste.org ISSN 2224-7181 (Paper) ISSN 2225-062X (Online) Vol.11, 2013 12 The direct run of the eluted fractions was capable to give more elaborated information about the nature of the electrophoresed proteins. Added to that, this protocol was much simpler. The direct run of the eluted fractions was capable to give more elaborated information about the nature of the analyzed proteins (Bollag et al., 1996).Therefore, to get much more accurate data about the nature and the number of bands of the eluted fraction, direct SDS-PAGE and silver nitrate dye were applied (Bonner, 2007). In spite of the relative differences obtained in the SDS-PAGE resolved positively charged fractions but such differences might not be exist because this relative difference didn’t belong to the difference in the protein profile of the resolved fractions as much as to the difference in the development time used in silver staining kit (Fermentas) to get the desired picture of the resolved bands (fig. 3). This suggestion was supported by the absence of any clear differences in the band profile of all the fractions after being lyophilized (fig. 4). After the elution of all positively charged fractions of the seminal fluid, several low molecular weight bands were not eluted with the profile of the positively charged fractions. This profile was clear in SDS-PAGE (fig. 4) and in native-PAGE (fig. 5). 3.2 SDS – Polyacrylamide Gel Electrophoresis (SDS – PAGE) of eluted and lyophilized positively charged fractions: It was found that is it was necessary to visualize the lyophilized positively charged seminal proteins on one dimentional native PAGE in addition to SDSPAGE as well (Garvin, 1990). This was done in order to completely characterize the positively charged fractions (Marques et al., 2000). Since SDS PAGE sometimes did not give full electrophoretic information so the deformation taken place in the proteins conformations as a result of denaturation (Laemmli, 1970). Add to that, as it was observed (fig. 4) that there were no clear distinctions between the profile of the whole seminal fluid profile and the profile of the eluted positively charged proteins. That’s why further data had to be provided by directly analyzing the same fraction on a gel without losing any of deformation. Nondenaturing – Polyacrylamide Gel Electrophoresis (Native – PAGE) of eluted and lyophilized positively charged fractions: More data were found in figure 5, in which much more clear distinguishing between the positively charged fractions and the seminal fluid. These differences were clearer than differences obtained in figure 4. Since some low molecular weight bands observed between 15kd and 20 kd were found to be absent in the positively charged fractions compared with the whole seminal fluid profile. In figure 4, it was found a certain ambiguity in the profile of the analyzed proteins on native PAGE. This might be attributed to the obvious positively charged characteristic feature observed in these fractions which made the electrophoresis much more difficult because the fierce resistance of these positively charged fractions to the electrical current applied. Several native PAGEs before this one were failure to run these fractions because all of these lanes were analyzed in parallel and continuous electrical current. Accordingly, as it shown in figure 5, an empty lane (lane 4) was placed between adjacent lanes and several on – off orders were used by power supply with time interval rests to alleviate the fierce resistance of these fractions to the electrical current applied (Westernmeier et al., 2005). DNA binding activity profile of rabbit DEAE cellulose positively charged seminal fractions after their incubation with gWizGFP DNA. Although the same incubation experiments shown in figure 1 were repeated on the positively charged fractions but the result in figure 6 was different in several interesting aspects. As long as no DNA hydrolysis happened in all lanes even with the lanes that had high concentrations of the positively charged fractions that incubated with the same DNA concentrations, so, there was no DNase activity in all the positively charged fractions. But the observed low level of DNA binding activity of the positively charged fractions (fig. 6) was less than what it was observed with the intact, non-fractionated seminal fluid (fig.1). This could be attributed to several reasons such as the loss of considerable amount of DNA binding activity during the process of ion exchange chromatography (Villemure et al., 2003), or during the process of lyophilization (Matejtschuk, 2007). The other reason that might explain such phenomenon was the possibility of existing of another significant DNA binding activity on the negatively charged fractions. Unfortunately, this site of view was never focused on during undergoing such experiments for several reasons such as the DNase activity was a classic and non-surprising activity observed usually observed in seminal fluid and it was not necessary to rediscover it. The second important reason of not taking negatively charged fractions in consideration with respect to new discovered seminal DNA binding activity was the apparent DNA binding activity observed in another DNA – seminal fluid incubation experiment (fig. 7). The number of papers that dealt with the DNA binding ability of the chromatography separated positively charged fractions of seminal fluid were not exist, but it was suggested that factor(s) in seminal fluid might prevent potentially dangerous molecules such as foreign DNA (which might not be present in the genital tracts from bacterial or viral sources) from gaining access to spermatozoa (Camaioni et al., 1992).
  • 6. Advances in Life Science and Technology www.iiste.org ISSN 2224-7181 (Paper) ISSN 2225-062X (Online) Vol.11, 2013 13 3.3 DNA binding activity profile of rabbit DEAE cellulose positively charged seminal fractions after their incubation with 364bp PCR fragment: The significant DNA binding activity observed in figure 7 was very clear and don’t require extended discussion since as much as the concentration of the positively charged fractions increase as much the retardation of the electrophoretic movement of the bound DNA was observed. This was attributed to the electrostatic attractions or ionic interactions taken place between DNA and proteins (Reece, 2004). But the only two things that deserve to be mentioned was the absolute absence of any DNase activity even when very high concentrations (15µg) of the positively charged fractions were used. The sort of DNA retardation (fig. 7) that extended in high concentration of these fractions even to the right DNA marker don’t represent any “specific” mode of DNA binding. This, in turn, affirms the general protective behavior performed by such fractions as one of the inevitable barriers against the entry of any bacterial or viral agent into the sperm cells (Camaioni et al., 1992). Conclusion : In addition to the naturally available DNase activity of seminal fluid, there is an undiscovered DNA binding activity available in positively charged seminal proteins. These two main activities could be separated by ion exchange chromatography. Accordingly, exogenous DNA was not only hydrolyzed by seminal proteins but its charge was largely neutralized by second group of seminal proteins have a positive charges in physiological pH. According to ion exchange chromatography, seminal DNase activity is exclusive to the negatively charged fractions. Acknowledgements We would like to thank Ms. Qumaria , Ms. Habiba ,and Mr.muhammed Ewadh for their support and cooperation . References Alghamdi A. S., and Foster D. N. (2005). Seminal DNase Frees Spermatozoa Entangled in Neutrophil Extracellular Traps. Biol.Reprod. 73, 1174–1181 . Baccetti, B. and Spadafora, C, (2000). 'Conclusions'. Molecular Reproduction & Development, 56; 329-330. Bollag D. M., Rozycki M. D., Edelstein S. J. (1996). Proteins Methods. Jhon Wiley and Sons Publications. Bonner L R. (2007). Protein Purification (the basics). Taylor and Francis group. Camaioni, A., Russo, M.A., Odorisio, T., Gandolfi, F., Fazio, V.M., and Siracusa, G. (1992). Uptake of exogenous DNA by mammalian spermatozoa: Specific localization of DNA on sperm heads. Journal of Reproduction & Fertility 961: 203-212. Carballada R, Esponda P. (2001). Regulation of Foreign DNA Uptake by Mouse Spermatozoa. Experimental Cell Research, 62, 104–113. Coligan J, Kruisbeck A, Margulies D, Shevach E, Strober W. (2005). Current Protocols in Immunology. New York: John Wiley and Sons, Inc. Gandolfi F. (2000). Sperm-mediated transgenesis. Theriogenology, 53, 127-37. Garvin D E. (1990). One-dimentional gel electrophoresis. From methods in enzymology, v 182, guide to protein purification, edited by Murray P. Deutscher. Horan R, Powell R, McQuaid S, Gannon F, Houghton J. A. (1991). Association of foreign DNA with porcine spermatozoa. Arch Androl 26 :83-92. Houdebine LM. (2003). Animal transgenesis and cloning. West Sussex, UK: Wiley & Sons.
  • 7. Advances in Life Science and Technology www.iiste.org ISSN 2224-7181 (Paper) ISSN 2225-062X (Online) Vol.11, 2013 14 Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680-685. Lauria A, Gandolfi F (1993): Recent advances in sperm cell mediated gene transfer. Molecular Reproduction & Development 36:255–257. Lavitrano, M., French, D., Zani, M., Frati, L., and Spadafora, C. (1992). The interaction between exogenous DNA and sperm cells. Molecular Reproduction & Development 31: 161-169. Lavitrano, M., Maione, B., Forte, E., Francolini, M., Sperandio, S., Testi, R. & Spadafora, C. (1997). The interaction of sperm cells with exogenous DNA: a role of CD4 and major histocompatibility complex class II molecules. Experimental Cell Research 233, 56—62. Marques V A., Goulari L. R., and Silva F. (2000). Variations of protein profiles and calcium and phospholipase A2 concentrations in thawed bovine semen and their relation to acrosome reaction. Genetics and Molecular Biology, 23, 4, 825-829. Matejtschuk P. Lyophilization of Proteins. (2007). From Cryopreservation and Freeze- Drying Protocols.Methods in Molecular Biology, Second Edition.Edited by John G. Day. © 2007 Humana Press Inc. Reece, R.J. (2004). Analysis of Genes and Genomes. John Wiley and Sons Ltd. p361-366. Sato M, Tanigawa M, Kikuchi N, Nakamura S, Kimura M, (2003). Efficient gene delivery into murine ovarian cells by intraovarian injection of plasmid DNA and subsequent in vivo Electroporation. Genesis 35 (3); 169–174. Singer R, Sagiv M, Allalouf D, Levinsky H, Servadio C. (1983). Deoxyribonuclease activity in human seminal fluid. Arch Androl; 10: 169-72. Sotolongo B., Huang T., Isenberger E., & Ward S. (2005). An Endogenous Nuclease in Hamster, Mouse, and Human Spermatozoa Cleaves DNA into Loop-Sized Fragments. Journal of Andrology, 26 (2); 272 – 280 . Tanigawa Y, Yoshihara K, Koide SS. (1975). Endonuclease activity in bull semen, testis and accessory sex organs. Biol. Reprod., 12: 464-70. Teixeira D., Melo L., Gadelha C., Cunha R., Bloch C., Rádis-Baptista G., Cavada B., and Freitas V. (2006). Ion- exchange chromatography used to isolate a spermadhesin-related protein from domestic goat (Capra hircus) seminal plasma. Genetic Molecular Researches, 5 (1): 79-87. Villemure M., Lazure C. and Manjunath P. (2003).Isolation and characterization of gelatin-binding proteins from goatseminal plasma. Reproductive Biology and Endocrinology, 1 (39); 1 – 10 . Westernmeier R., Gronau S., Becket P., Bulles J., Scchickle H. and Thebling G. (2005). Electrophoresis in practice. Wiley-VCH Verlang GmbH and Co KGaA. Zani M, Lavitrano M, French D, Lulli V, Maione B, Sperandio S, Spadafora C. (1995). The mechanism of binding of exogenous DNA to sperm cells: factors controlling the DNA uptake. Experimental Cell Researches 2 17: 57-64.
  • 8. Advances in Life Science and Technology www.iiste.org ISSN 2224-7181 (Paper) ISSN 2225-062X (Online) Vol.11, 2013 15 Figure 1. DNase activity profile of rabbit’s seminal fluid after its incubation with gWizGFP vector .Lane 1: 20µl size marker (Invitrogen). Lane 2: 2µg gWizGFP DNA. Lane 3 to lane 12:10µl taken from incubation of 6µg gWizGFP DNA with (1, 2, 3, 4, 5, 6, 7, 8, 9, & 10)µl seminal fluid. Electrophoresis conditions: agarose concentration 1%, power applied: 4.1 V / cm, time of run: 1 hr. Figure 2. Ion-exchange chromatography of rabbit seminal fluid on a DEAE-cellulose column. The 4cm length of DEAE cellulose was washed with 0.02 M phosphate buffer, pH 7.3, at a flow rate of 3ml/fraction. The first 3 fractions were discarded. Thus no. 1 in this diagram refers to first fraction submitted to SDS-PAGE. Once protein concentration was reduced, linear gradient of 0 to 1 M NaCl was used to elute negatively charge fractions. Ion exchange chromatography conditions: column type: conventional glass column, flow force: gravity, flow rate partitioning: 3ml/tube each.
  • 9. Advances in Life Science and Technology www.iiste.org ISSN 2224-7181 (Paper) ISSN 2225-062X (Online) Vol.11, 2013 16 Figure 3. Silver stained positively charged proteins of rabbit seminal fluid electrophoresed on SDS-PAGE after being fractionated by DEAE anion exchanger. Lane a: protein size marker (Fermentas - 10µl). Lane b: rabbit seminal fluid (4.5µl). Lane 1 to 20: 15 µl from fraction 1 to fraction no. 20. Lane c: protein low molecular weight marker (Amersham - 7µl). SDS PAGE electrophoresis conditions: polyacrylamide concentration 14% separating gel and 4% stacking gel. Voltage applied: 11.54 V / cm. run time: 75 min.
  • 10. Advances in Life Science and Technology www.iiste.org ISSN 2224-7181 (Paper) ISSN 2225-062X (Online) Vol.11, 2013 17 Figure 4. Silver stained lyophilized positively charged proteins of rabbit seminal fluid electrophoresed on SDS-PAGE after being fractionated by DEAE anion exchanger. Lane 1: protein size marker (Fermentas - 10µl). Lane 2: rabbit seminal fluid (4.5µl).Lane 3: fraction number 2-5 (1µg each). Lane 4: fraction number 6-10 (1 µg each). Lane 5: fraction number 11-15 (7 µl each). Lane 6: fraction number 16-20 (1 µg each). Lane 7: protein low molecular weight lyophilized marker (Amersham - 4µl). SDS-PAGE electrophoresis conditions: polyacrylamide concentration 14% separating gel and 4% stacking gel. Voltage applied: 11.54 V / cm. run time: 90 min. Figure 5. Silver stained lyophilized positively charged proteins of rabbit seminal fluid electrophoresed on native-PAGE after being fractionated by DEAE anion exchanger. Lane 1: protein low molecular weight lyophilized marker (Amersham - 4µl). Lane 2: rabbit seminal fluid (4.5µl). Lane 3: fraction number 2-5 (10µg). Lane 4: empty. Lane 5: fraction number 6-10 (7µg). Lane 6: fraction number 11-15 (7µg). Lane 7: fraction number 16-20 (7µg) Native-PAGE electrophoresis conditions: polyacrylamide concentration 14% separating gel and 4% stacking gel. Voltage applied: 11.54 V / cm. run time: 90 min. Figure 6. DNA retardation activity profile of rabbit DEAE cellulose positively charged seminal fractions after incubation of variable concentration of these fractions with gWizGFP DNA. Lane 1: 12µl DNA size marker (Invitrogen). Lane 2: 2µg gWizGFP vector. Lane 3 to lane 12: 2µg gWizGFP vector with (1, 2, 3, 4, 5, 6, 7, 8, 9, 10) µg of DEAE seminal fractions. Electrophoresis conditions: agarose concentration 1%, power applied: 4.1 V / cm, time of run: 1 hr.
  • 11. Advances in Life Science and Technology www.iiste.org ISSN 2224-7181 (Paper) ISSN 2225-062X (Online) Vol.11, 2013 18 Figure 7. DNA retardation activity profile of rabbit DEAE cellulose positively charged seminal fractions after incubation of variable concentrations of these fractions with 364bp PCR fragment. Lane 1: 1.5µg DNA size marker (Fermentas). Lane 2: 0.5 µg 364bp PCR fragment. Lane 3 to lane 6: 6 µg 364bp PCR fragment incubated with (1, 5, 10, 15)µg DEAE cellulose eluted positively charged proteins respectively. Electrophoresis conditions: agarose concentration 2%, power applied: 5.5 V / cm, time of run: 1 hr.
  • 12. This academic article was published by The International Institute for Science, Technology and Education (IISTE). The IISTE is a pioneer in the Open Access Publishing service based in the U.S. and Europe. The aim of the institute is Accelerating Global Knowledge Sharing. More information about the publisher can be found in the IISTE’s homepage: http://www.iiste.org CALL FOR JOURNAL PAPERS The IISTE is currently hosting more than 30 peer-reviewed academic journals and collaborating with academic institutions around the world. There’s no deadline for submission. Prospective authors of IISTE journals can find the submission instruction on the following page: http://www.iiste.org/journals/ The IISTE editorial team promises to the review and publish all the qualified submissions in a fast manner. All the journals articles are available online to the readers all over the world without financial, legal, or technical barriers other than those inseparable from gaining access to the internet itself. Printed version of the journals is also available upon request of readers and authors. MORE RESOURCES Book publication information: http://www.iiste.org/book/ Recent conferences: http://www.iiste.org/conference/ IISTE Knowledge Sharing Partners EBSCO, Index Copernicus, Ulrich's Periodicals Directory, JournalTOCS, PKP Open Archives Harvester, Bielefeld Academic Search Engine, Elektronische Zeitschriftenbibliothek EZB, Open J-Gate, OCLC WorldCat, Universe Digtial Library , NewJour, Google Scholar