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Analysis of African Swine Fever epidemiology and pig value chains to underpin design of 
an ASF risk management strategy on the Kenya‐Uganda border

Closing workshop of the BecA‐ILRI‐CSIRO‐AusAID project (2011‐13): 
Understanding ASF epidemiology as a basis for control
2nd‐3rd October, 2013. Sarova PanAfric Hotel, Nairobi, Kenya
Invited Presentation:  Michel Dione, Emily Ouma, Kristina Roesel & Danilo Pezo
CGIAR Research Program on Livestock and Fish

Strengthening pig value chains and managing ASF risk in Uganda: 
h
l
h
d
k
d
identifying best bet solutions
Strengthening pig value chains and managing ASF 
risk in Uganda: identifying best bet solutions
risk in Uganda: identifying best bet solutions
Michel Dione, Emily Ouma, Kristina Roesel and Danilo Pezo

BecA‐ILRI‐CSIRO‐AusAid African Swine Fever Epidemiology Project Closing 
Workshop, Nairobi, Kenya
Presentation outline
• Background of the  pig value chains development 
project in Uganda
project in Uganda
• Rapid value chain assessment: methods and process  
• A i lh l h dh b d
Animal health and husbandry practices in the pig 
i
i h i
sector
• Practices, behavior associated with ASF spread in 
Uganda
• Process and criteria for identifying best‐bet 
interventions
• Potential best‐bet interventions for animal health and 
management
Importance of Pig Production in Uganda   
p
g
g
Pig production‐ a dynamic and rapidly growing sector  in Uganda. In the 
past three decades increased from 0.19 to 3.2 million pigs (UBOS, 2009; 
h
d d i
df
0 19 3 2 illi
i (UBOS 2009
FAO, 2011). 

Uganda has the highest per capita consumption (3.4 kg/person/year) in 
the region  10 times increase in the last 30 years, whereas beef is 
the region ‐10 times increase in the last 30 years, whereas beef is
declining (FAO, 2011) 
Structure of the Pig Sector in Uganda
g
g
A large informal subsector
• More than1.1 million households.
• Backyard pig production, mainly managed by 
women and children, as means to diversify risk 
and increase livelihood security.
di
li lih d
it
• Tethering & scavenging are common.
• In few districts peri urban small scale semi
In few districts, peri‐urban small‐scale semi‐
intensive systems 
• Uncoordinated trade & transport
p
• Mostly unsupervised slaughter, no meat 
inspection in local markets, road‐side butchers
• Pork joints
Smallholder Pig Value Chains Development  
project in Ugandaoject
project in Ugandaoject Goal
Goal: To improve the 
Goal: To improve the
livelihoods, incomes and 
assets of smallholder pig 
assets of smallholder pig
producers, particularly 
women, in a sustainable 
women in a sustainable
manner, through increased 
productivity, reduced risk, and 
productivity reduced risk and
improved access in pig value 
chains
Pig value chain assessment methodology:
Selection of Target Sites (1) 
Selection of Target Sites (1)












Step 1: Geographical targeting using GIS 
characterization (pig density, poverty 
(p g
yp
y
level & market access).
Step 2: Stakeholder consultation of step 1 
1 and definition of  soft criteria
1 and definition of “soft” criteria.
Step 3: Participatory selection of districts 
by stakeholders (Outcome Mapping & 
Site Selection Workshop, Oct. 2012).
Step 4: 4‐6 sub‐counties with high pig 
population in each selected district.
population in each selected district.
Step 5: Minimum checklist to gather data 
for more specific site selection (parishes 
and villages).
d ill
)
Step 6: Analysis of steps 1‐4 and final site 
selection.
7
Selection of Target Sites (2)
List of counties and sub‐counties selected in each district, based on 
List of counties and sub‐
presence of dominant value chain domains, and number of villages sampled
District

County

Sub‐county
Sub county

Dominant value  No. of villages 
Dominant value No of villages
chain domain
sampled

Masaka

Bukoto
Bukoto
Bukoto
Masaka Municipality
Masaka Municipality
Masaka Municipality

Kkingo
Kyanamukaka
Kabonera
Kimanya‐Kyabakuza*
Katwe‐Butego*
Nyendo‐Ssenyange*

Rural  rural
Rural –rural
Rural‐rural
Rural‐urban
Urban‐urban
Urban‐urban
Urban‐urban

3
3
3
2
2
2

Kamuli

Bugabula
Bugabula
Buzaaya

Kitayunjwa
Namwendwa
Bugulumbya**

Rural‐rural
Rural‐rural
Rural‐rural

2
2
4

Mukono

Mukono
Mukono
Mukono
Mukono

Mukono town council
Goma
Kyampisi
Ntenjeru

Urban‐urban
Urban–urban
Rural urban
Rural‐urban
Rural‐rural

2
2
4
4

35 villages selected: 18 Rural – Rural, 7 Rural – Urban and 10 Urban ‐ Urban   
35 villages selected: 18 Rural – Rural, 7 Rural – Urban and 10 Urban ‐
VCA toolkit development and administration –
(i) Producer level (n=1400)
(i) Producer level (n=1400)
General components
• Seasonal mapping including identification of cropping enterprises and 
pp g
g
pp g
p
regimes.
• Assessment of institutions operating in the village, community’s 
perception of their importance and interactions.
perception of their importance and interactions
• Objectives of pig production and identification of the pig production 
types and systems.
• Gender roles in pig production and marketing separate groups of men
Gender roles in pig production and marketing – separate groups of men 
and women to work on the following tools:
• Activity clock
• Decision making
ii
ki
• Livelihood analysis

Specific domains
•
•
•
•

Animal health and husbandry practices
Feeding and breeding
Feeding and breeding
VC mapping and marketing
Food safety, nutrition and zoonoses
VCA – (ii) other actors
INPUTS/SERVICES
 Feed input stockists and millers (n=36)
 Vet drugs stockists (n=36)
 Service providers: 
o Veterinarians/AHA/paravets (n=53)
o Owners of village breeding boars (n=90)
o Extension staff (public and private) 
OUTPUT
 Traders of live pigs (including collectors and 
transporters) (n=86)
transporters) (n=86)
 Slaughterhouses/abattoirs
 Processors (formal‐Fresh Cuts/Quality Cuts)
Processors (formal Fresh Cuts/Quality Cuts)
 Retailers (meat/processed products) – butcheries, 
supermarkets, pork‐joints
 Consumers – preferences for different pig/pork product 
attributes
Value chain assessment results:
Management and animal health
Management and animal health
Pig management typologies (n=350)
Confinement type
Tethering

RR (%) (n=180)
66

RU (%) (n=70)
40

UU (%) (n=100)
13

Housed Housed raised floor

5

6

25

37
18

61
1

Housed not raised floor 16
Free‐range/Scavenging
Free range/Scavenging
17

House with raised floor

House not raised floor

Tethered pig

Scavenging piglet
Rural‐rural
Rural‐urban
Urban‐urban

Goma

M
Mukono TC

Nyendo‐Ssenyange

we‐Butego
Katw

Kimanya‐Kyabakuza

Kyampisi

Kabonera

Ntenjeru

Bu
ugulumbya

Namwendwa

K
Kitayunjwa

Kya
anamukaka

Kkingo

Most common cause of death (n=350)
100

80

60
heat stress

40
accident

predation

malice

20
malnutrition

disease

0
Pig disease diseases prioritized by farmers
Rural‐Rural (n=170)
Disease
ASF
worms
mange
lice
midge
diarrhea
malnutrition
FMD
Others*

Morbidity 
(%)
29.8
55.1
16.1
9.8
1.3
5.8
2.4
0.0
0.0

Mortality 
(%)
23.1
12.0
1.9
0.3
0.0
1.3
0.1
0.0
0.0

Case fatality 
(%)
77.5
21.9
11.5
3.6
0.0
4.7
2.6
0.0
0.0

Rural‐Urban (n=90)
Morbidity 
(%)
43.1
35.0
14.8
7.5
0.1
4.6
3.6
0.0
3.8

Mortality 
(%)
31.8
5.0
1.1
0.0
0.0
0.7
0.0
0.0
0.2

Case fatality 
(%)
73.6
14.4
7.5
0.6
0.0
5.4
0.9
0.0
4.9

Urban‐Urban (n=80)
Morbidit
y (%)
15.8
22.3
14.0
1.1
1.1
5.6
4.3
1.5
0.3

Mortality 
(%)
7.5
1.8
0.4
0.0
0.0
0.5
0.1
0.0
0.0

*Swine erysipelas, anemia, ticks, jiggers, heat stress, fever, undiagnosed diseases usually related to sudden death

Case Fatality 
(%)
47.5
8.3
2.8
0.3
0.3
4.2
3.2
0.1
0.8
Seasonal variation of diseases and vectors 
occurrence (n=350)
occurrence (n 350)
Proportion of cases (%
%)

25
Rainfall

20
15

ASF

10

Worms

5

Diarrhea

0

Malnutrition
Jan

Feb

Mar

Apr
p

May
y

Jun

Jul

Aug
g

Sept
p

Oct

Nov

Dec

40

Proport
tion of cases (%
%)

35
30

Rainfall

25

Mite

20

Lice

15

Jigger
Midge

10

Ticks
5
0
Jan

Feb

Mar

Apr

May

Jun

Jul

Aug

Sept

Oct

Nov

Dec
The use of the “village boar” and risk associated 
with disease spread  (1)
p
( )
Different sources of the village boar (n=90)
1% 1%
3%

Other pig farmers (other 
h
f
( h
village/town)
Born on farm

24%
46%

Other pig farmers (same 
Oth
i f
(
village)
Development project
Farmer Organization/self‐help 
Farmer Organization/self help
group

25%

In kind payment for boar 
service
The use of the “village boar” and risk associated with 
disease spread  (2)
disease spread (2)
Locations from where the sows come from for servicing 
(n=90)
( 90)
Proport
tion of farmer
rs (%)

60
50
40
30
20
10
0
Neighbour within the same village Farmers from other village

Other

Home
•
•
•
•
•
•
•

Other risk factors associated to ASF spread 
Poor knowledge of farmers on management and 
Poor knowledge of farmers on management and
husbandry practices
Poor confinement systems
Poor confinement systems
Poor feeding systems (feeding on kitchen leftovers)
Uncontrolled live pig traders movement
Uncontrolled live pig traders movement
Poor biosecurity measures for health workers (paravets)
Poor diagnostic capacities (local and national)
Poor diagnostic capacities (local and national)
Poor surveillance systems (poor feedback to farmers)
Some measures taken by farmers to minimize 
disease spread
di
d
• Request for information on the sow (health status,
Request for information on the sow (health status, 
housing type, health of offspring and treatment records) 
before servicing
before servicing
• Isolate and deworm and spray sows when they come to 
the farm
the farm
• Avoid servicing sick sows
• Stop farms visits and servicing during ASF outbreaks
Stop farms visits and servicing during ASF outbreaks
• Service only trusted sow owners
• Apply good sanitation on the farm
Apply good sanitation on the farm
Identification of potential best‐bet 
p
intervention in animal health and 
management in the pig value chain in 
management in the pig value chain in
Uganda
Process for identifying best‐bet 
interventions
• Rapid value chain assessment
Rapid value chain assessment
• Impact pathway workshop (assess constraints along 
the VC, identify options for intervention)
the VC identify options for intervention)
• Ex‐ante assessment (impact of interventions on 
identified indicators in the VC node and the system)
identified indicators in the VC node and the system)
• Validation of the potential best‐bet intervention (feed‐
back to farmers and local government)
back to farmers and local government)
• Testing of best‐bet intervention
• Scaling out
Scaling out
Some key considerations/criteria for the selection 
and monitoring of best‐bet interventions
and monitoring of best‐bet interventions
• Socio cultural (fit into local context)
• Cost‐effective (affordable by farmers)
• Sustainability and environmentally friendly e.g. (do it 
themselves and pass it over) 
• Technology attributes: simple/appropriate 
• Institutional support 
• Realistic and measurable within the time frame of the 
project
• Other criteria (contribution to project Vision and 
Mission) 
Potential best‐bet interventions in health and management the 
Uganda pig Value chains (1)
Issues

What is it related to?

Limited
knowledge on 
y
biosecurity 
measures 

•
•

outcome

•
•

No deworming
No deworming regime
No prophylaxis program

•
•

Farmers
Local 
Government

• Training on good
on good 
husbandry practices
• Promote confiment in 
house

• Improved health

• Training package
Training package
(manual on good 
husbandry practices)
• KAP survey
• Testing of deworming 
regime

•
•
•

Use of communal boar
Biosecurity  
ASF dissemination

•
•

Farmers
Local 
Government
Animal health 
workers
Traders

• Identification of strategies 
to improve village boar 
selection and reduce 
disease risks associated 
with their use
• Designing and testing of 
different models of 
disseminating information 

• Improved breeding 
services

• Training of farmers on 
improved model for 
breeding

•
•

•
•

•

•
•

Education package to 
actors including : 
g
biosecurity knowledge 
and pig disease 
information
Increase awareness of 
consumers on impact of 
pig meat born disease
pig meat born disease

•
•
•

Reduced spread 
of disease
Increased pig 
pg
productivity
Increased income
Reduced public 
health risks

Activities

•
•
•
•

•

Farmers
Traders
Consumers
Processors/Aba
ttoir/Slaughter
areas

Interventions

Sharing of village boar
Selling diseased pigs 
during ASF outbreak
g
Consuming sick pigs at 
home 
Scavenging practice
Feeding with swill
Uncontrolled inter‐farm 
visits
Poor hygiene at the farm 
and slaughter place
Spread disease from farm 
to farm

•
•
•

Lack of knowledge
of knowledge 
on good 
husbandry 
practices

Actors

•

•

Longitudinal RCT 
(Knowledge,
attitudes and 
practice 
intervention, KAP)
Training package 
(biosecurity 
manual/leaflets/pos
ter)
Potential best‐bet interventions in health and management the 
Uganda pig Value chains (2)
Issues

What is it related to?

Poor confinement 
types

•
•
•

Poor housing (lack of 
space, poor hygiene)
space poor hygiene)
Harsh weather
Poor tethering methods

Actors
•
•

Farmers
Local government
Local government

Poor disease 
surveillance

• Poor action  from MAAIF 
after outbreak 
• District Veterinary office 
poorly equipped  for rapid 
disease diagnose
• Poor diagnostic
• Poor inspection at 
slaughterhouse
l h h

•
•
•

MAAIF/NADDEC
Research labs
District Veterinary 
Office

Poor 
implementation of 
p y g
policy regulations 

•

Poor biosecurity
implementation
Misuse of drugs
g
Poor quality drug
Fake health workers
Fake drugs

•
•

MAAIF
Veterinary 
Officers
Local Government
Drug stockists
Animal health 
workers

•
•
•
•

•
•
•

Interventions
•

Promote housing  
model with 3‐stages 
model with 3‐stages
enclosure (Kraal)

Outcome

Activities

• Increased 
productivity

• Test a housing 
model

•
• Rapid diagnostic tests 
(ASF/Cyst.)
• Central slaughter place 
at village level

• Increase the capacity 
of MAAIF and local 
Government to 
implement regulations
• Sensitize  actors on 
consequence of low 
quality drugs

Pig health 
improved

• Healthier 
pigs
• Better use 
of drugs
• Increased
productivity

• Test central 
slaughter  at
village model
• Field lab for 
quick 
differential 
diagnostic

• Designing and 
testing of 
different 
models of 
delivery of 
information
CGIAR Research Program on Livestock and Fish
CGIAR Research Program on Livestock and Fish
EU/IFAD; ILRI; The team of facilitators; The local government authorities of Masaka, Mukono and 
Kamuli districts; VEDCO in Kamuli

livestockfish.cgiar.org

CGIAR is a global partnership that unites organizations engaged in research for a food secure future. The CGIAR 
Research Program on Livestock and Fish aims to increase the productivity of small‐scale livestock and fish systems 
in sustainable ways, making meat, milk and fish more available and affordable across the developing world.

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